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For: Unthan S, Radek A, Wiechert W, Oldiges M, Noack S. Bioprocess automation on a Mini Pilot Plant enables fast quantitative microbial phenotyping. Microb Cell Fact 2015;14:32. [PMID: 25888907 PMCID: PMC4361198 DOI: 10.1186/s12934-015-0216-6] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2014] [Accepted: 02/23/2015] [Indexed: 11/10/2022]  Open
Number Cited by Other Article(s)
1
Halle L, Hollmann N, Tenhaef N, Mbengi L, Glitz C, Wiechert W, Polen T, Baumgart M, Bott M, Noack S. Robotic workflows for automated long-term adaptive laboratory evolution: improving ethanol utilization by Corynebacterium glutamicum. Microb Cell Fact 2023;22:175. [PMID: 37679814 PMCID: PMC10483779 DOI: 10.1186/s12934-023-02180-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 08/15/2023] [Indexed: 09/09/2023]  Open
2
Baumann PT, Dal Molin M, Aring H, Krumbach K, Müller MF, Vroling B, van Summeren-Wesenhagen PV, Noack S, Marienhagen J. Beyond rational-biosensor-guided isolation of 100 independently evolved bacterial strain variants and comparative analysis of their genomes. BMC Biol 2023;21:183. [PMID: 37667306 PMCID: PMC10478468 DOI: 10.1186/s12915-023-01688-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Accepted: 08/23/2023] [Indexed: 09/06/2023]  Open
3
Zuchowski R, Schito S, Neuheuser F, Menke P, Berger D, Hollmann N, Gujar S, Sundermeyer L, Mack C, Wirtz A, Weiergräber OH, Polen T, Bott M, Noack S, Baumgart M. Discovery of novel amino acid production traits by evolution of synthetic co-cultures. Microb Cell Fact 2023;22:71. [PMID: 37061714 PMCID: PMC10105947 DOI: 10.1186/s12934-023-02078-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Accepted: 04/02/2023] [Indexed: 04/17/2023]  Open
4
Metabolomics and modelling approaches for systems metabolic engineering. Metab Eng Commun 2022;15:e00209. [PMID: 36281261 PMCID: PMC9587336 DOI: 10.1016/j.mec.2022.e00209] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Revised: 10/13/2022] [Accepted: 10/14/2022] [Indexed: 11/21/2022]  Open
5
Bleisch R, Freitag L, Ihadjadene Y, Sprenger U, Steingröwer J, Walther T, Krujatz F. Strain Development in Microalgal Biotechnology-Random Mutagenesis Techniques. LIFE (BASEL, SWITZERLAND) 2022;12:life12070961. [PMID: 35888051 PMCID: PMC9315690 DOI: 10.3390/life12070961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Revised: 06/15/2022] [Accepted: 06/22/2022] [Indexed: 11/17/2022]
6
Helleckes LM, Osthege M, Wiechert W, von Lieres E, Oldiges M. Bayesian calibration, process modeling and uncertainty quantification in biotechnology. PLoS Comput Biol 2022;18:e1009223. [PMID: 35255090 PMCID: PMC8939798 DOI: 10.1371/journal.pcbi.1009223] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Revised: 03/22/2022] [Accepted: 01/16/2022] [Indexed: 12/23/2022]  Open
7
Raj K, Venayak N, Diep P, Golla SA, Yakunin AF, Mahadevan R. Automation assisted anaerobic phenotyping for metabolic engineering. Microb Cell Fact 2021;20:184. [PMID: 34556155 PMCID: PMC8461876 DOI: 10.1186/s12934-021-01675-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Accepted: 09/10/2021] [Indexed: 11/10/2022]  Open
8
Reiter A, Herbst L, Wiechert W, Oldiges M. Need for speed: evaluation of dilute and shoot-mass spectrometry for accelerated metabolic phenotyping in bioprocess development. Anal Bioanal Chem 2021;413:3253-3268. [PMID: 33791825 PMCID: PMC8079306 DOI: 10.1007/s00216-021-03261-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Revised: 02/18/2021] [Accepted: 03/01/2021] [Indexed: 01/29/2023]
9
Jansen R, Küsters K, Morschett H, Wiechert W, Oldiges M. A fully automated pipeline for the dynamic at-line morphology analysis of microscale Aspergillus cultivation. Fungal Biol Biotechnol 2021;8:2. [PMID: 33676585 PMCID: PMC7937226 DOI: 10.1186/s40694-021-00109-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 02/16/2021] [Indexed: 11/27/2022]  Open
10
Potential of Integrating Model-Based Design of Experiments Approaches and Process Analytical Technologies for Bioprocess Scale-Down. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2021. [PMID: 33381857 DOI: 10.1007/10_2020_154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/18/2023]
11
Hemmerich J, Labib M, Steffens C, Reich SJ, Weiske M, Baumgart M, Rückert C, Ruwe M, Siebert D, Wendisch VF, Kalinowski J, Wiechert W, Oldiges M. Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion. Microb Biotechnol 2020;13:2020-2031. [PMID: 32893457 PMCID: PMC7533341 DOI: 10.1111/1751-7915.13660] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Revised: 08/14/2020] [Accepted: 08/17/2020] [Indexed: 12/19/2022]  Open
12
Radivojević T, Costello Z, Workman K, Garcia Martin H. A machine learning Automated Recommendation Tool for synthetic biology. Nat Commun 2020;11:4879. [PMID: 32978379 PMCID: PMC7519645 DOI: 10.1038/s41467-020-18008-4] [Citation(s) in RCA: 74] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Accepted: 07/27/2020] [Indexed: 01/07/2023]  Open
13
Jansen RP, Müller MF, Schröter SE, Kappelmann J, Klein B, Oldiges M, Noack S. Parallelized disruption of prokaryotic and eukaryotic cells via miniaturized and automated bead mill. Eng Life Sci 2020;20:350-356. [PMID: 32774207 PMCID: PMC7401235 DOI: 10.1002/elsc.202000002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Accepted: 04/17/2020] [Indexed: 11/07/2022]  Open
14
Andriiash GS, Sekan OS, Tigunova OO, Blume YB, Shulga SM. Metabolic Engineering of Lysine Producing Corynebacterium glutamicum Strains. CYTOL GENET+ 2020. [DOI: 10.3103/s0095452720020024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
15
Venayak N, Raj K, Mahadevan R. Impact framework: A python package for writing data analysis workflows to interpret microbial physiology. Metab Eng Commun 2019;9:e00089. [PMID: 31011536 PMCID: PMC6462781 DOI: 10.1016/j.mec.2019.e00089] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Revised: 03/19/2019] [Accepted: 03/19/2019] [Indexed: 12/26/2022]  Open
16
Ravindran S, Singh P, Nene S, Rale V, Mhetras N, Vaidya A. Microbioreactors and Perfusion Bioreactors for Microbial and Mammalian Cell Culture. Biotechnol Bioeng 2019. [DOI: 10.5772/intechopen.83825] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
17
Otten J, Tenhaef N, Jansen RP, Döbber J, Jungbluth L, Noack S, Oldiges M, Wiechert W, Pohl M. A FRET-based biosensor for the quantification of glucose in culture supernatants of mL scale microbial cultivations. Microb Cell Fact 2019;18:143. [PMID: 31434564 PMCID: PMC6704555 DOI: 10.1186/s12934-019-1193-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Accepted: 08/14/2019] [Indexed: 01/27/2023]  Open
18
Systems Metabolic Engineering Strategies: Integrating Systems and Synthetic Biology with Metabolic Engineering. Trends Biotechnol 2019;37:817-837. [DOI: 10.1016/j.tibtech.2019.01.003] [Citation(s) in RCA: 226] [Impact Index Per Article: 45.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2018] [Revised: 01/07/2019] [Accepted: 01/10/2019] [Indexed: 12/12/2022]
19
Morschett H, Loomba V, Huber G, Wiechert W, von Lieres E, Oldiges M. Laboratory-scale photobiotechnology-current trends and future perspectives. FEMS Microbiol Lett 2019;365:4604817. [PMID: 29126108 DOI: 10.1093/femsle/fnx238] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2017] [Accepted: 11/07/2017] [Indexed: 11/13/2022]  Open
20
Haby B, Hans S, Anane E, Sawatzki A, Krausch N, Neubauer P, Cruz Bournazou MN. Integrated Robotic Mini Bioreactor Platform for Automated, Parallel Microbial Cultivation With Online Data Handling and Process Control. SLAS Technol 2019;24:569-582. [PMID: 31288593 DOI: 10.1177/2472630319860775] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
21
Stella RG, Wiechert J, Noack S, Frunzke J. Evolutionary engineering of Corynebacterium glutamicum. Biotechnol J 2019;14:e1800444. [DOI: 10.1002/biot.201800444] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Revised: 01/23/2019] [Indexed: 01/02/2023]
22
Wendisch VF. Metabolic engineering advances and prospects for amino acid production. Metab Eng 2019;58:17-34. [PMID: 30940506 DOI: 10.1016/j.ymben.2019.03.008] [Citation(s) in RCA: 142] [Impact Index Per Article: 28.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2019] [Revised: 03/26/2019] [Accepted: 03/26/2019] [Indexed: 11/18/2022]
23
Tajsoleiman T, Mears L, Krühne U, Gernaey KV, Cornelissen S. An Industrial Perspective on Scale-Down Challenges Using Miniaturized Bioreactors. Trends Biotechnol 2019;37:697-706. [PMID: 30737008 DOI: 10.1016/j.tibtech.2019.01.002] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 01/04/2019] [Accepted: 01/04/2019] [Indexed: 12/25/2022]
24
Noack S, Baumgart M. Communities of Niche-Optimized Strains: Small-Genome Organism Consortia in Bioproduction. Trends Biotechnol 2019;37:126-139. [DOI: 10.1016/j.tibtech.2018.07.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2018] [Revised: 07/16/2018] [Accepted: 07/17/2018] [Indexed: 12/30/2022]
25
Demling P, Westerwalbesloh C, Noack S, Wiechert W, Kohlheyer D. Quantitative measurements in single-cell analysis: towards scalability in microbial bioprocess development. Curr Opin Biotechnol 2018;54:121-127. [DOI: 10.1016/j.copbio.2018.01.024] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2017] [Revised: 01/02/2018] [Accepted: 01/22/2018] [Indexed: 10/17/2022]
26
Hemmerich J, Tenhaef N, Steffens C, Kappelmann J, Weiske M, Reich SJ, Wiechert W, Oldiges M, Noack S. Less Sacrifice, More Insight: Repeated Low-Volume Sampling of Microbioreactor Cultivations Enables Accelerated Deep Phenotyping of Microbial Strain Libraries. Biotechnol J 2018;14:e1800428. [PMID: 30318833 DOI: 10.1002/biot.201800428] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Revised: 09/26/2018] [Indexed: 12/18/2022]
27
Improved microscale cultivation of Pichia pastoris for clonal screening. Fungal Biol Biotechnol 2018;5:8. [PMID: 29750118 PMCID: PMC5932850 DOI: 10.1186/s40694-018-0053-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2017] [Accepted: 03/28/2018] [Indexed: 11/10/2022]  Open
28
Hemmerich J, Noack S, Wiechert W, Oldiges M. Microbioreactor Systems for Accelerated Bioprocess Development. Biotechnol J 2018;13:e1700141. [PMID: 29283217 DOI: 10.1002/biot.201700141] [Citation(s) in RCA: 86] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2017] [Revised: 12/15/2017] [Indexed: 12/14/2022]
29
Baumgart M, Unthan S, Kloß R, Radek A, Polen T, Tenhaef N, Müller MF, Küberl A, Siebert D, Brühl N, Marin K, Hans S, Krämer R, Bott M, Kalinowski J, Wiechert W, Seibold G, Frunzke J, Rückert C, Wendisch VF, Noack S. Corynebacterium glutamicum Chassis C1*: Building and Testing a Novel Platform Host for Synthetic Biology and Industrial Biotechnology. ACS Synth Biol 2018;7:132-144. [PMID: 28803482 DOI: 10.1021/acssynbio.7b00261] [Citation(s) in RCA: 55] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
30
Barz T, Sommer A, Wilms T, Neubauer P, Cruz Bournazou MN. Adaptive optimal operation of a parallel robotic liquid handling station ⁎ ⁎T.B. and A.S. acknowledge partial funding of this project by the Austrian Research Funding Association (FFG) within the programme Bridge in the project modELTES (project No. 851262). M.N.C.B. acknowledge financial support by the German Federal Ministry of Education and Research (BMBF) within the Framework Concept ‘Research for Tomorrow’s Production’ (AUTOBIO). ACTA ACUST UNITED AC 2018. [DOI: 10.1016/j.ifacol.2018.04.006] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
31
Radek A, Tenhaef N, Müller MF, Brüsseler C, Wiechert W, Marienhagen J, Polen T, Noack S. Miniaturized and automated adaptive laboratory evolution: Evolving Corynebacterium glutamicum towards an improved d-xylose utilization. BIORESOURCE TECHNOLOGY 2017;245:1377-1385. [PMID: 28552568 DOI: 10.1016/j.biortech.2017.05.055] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Revised: 05/08/2017] [Accepted: 05/10/2017] [Indexed: 05/22/2023]
32
Hemmerich J, Wiechert W, Oldiges M. Automated growth rate determination in high-throughput microbioreactor systems. BMC Res Notes 2017;10:617. [PMID: 29178966 PMCID: PMC5702135 DOI: 10.1186/s13104-017-2945-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Accepted: 11/17/2017] [Indexed: 11/16/2022]  Open
33
Koepff J, Morschett H, Busche T, Winkler A, Kalinowski J, Wiechert W, Oldiges M. Differential transcriptomic analysis reveals hidden light response in Streptomyces lividans. Biotechnol Prog 2017;34:287-292. [DOI: 10.1002/btpr.2566] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2017] [Revised: 09/25/2017] [Indexed: 11/07/2022]
34
Glauche F, Glazyrina J, Cruz Bournazou MN, Kiesewetter G, Cuda F, Goelling D, Raab A, Lang C, Neubauer P. Detection of growth rate-dependent product formation in miniaturized parallel fed-batch cultivations. Eng Life Sci 2017;17:1215-1220. [PMID: 32624749 PMCID: PMC6999230 DOI: 10.1002/elsc.201600029] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2016] [Revised: 04/28/2017] [Accepted: 07/24/2017] [Indexed: 12/22/2022]  Open
35
Wilms T, Rischawy DF, Barz T, Esche E, Repke JU, Wagner A, Neubauer P, Cruz Bournazou MN. Dynamic Optimization of the PyNP/PNP Phosphorolytic Enzymatic Process Using MOSAICmodeling. CHEM-ING-TECH 2017. [DOI: 10.1002/cite.201700065] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
36
Limberg MH, Joachim M, Klein B, Wiechert W, Oldiges M. pH fluctuations imperil the robustness of C. glutamicum to short term oxygen limitation. J Biotechnol 2017;259:248-260. [DOI: 10.1016/j.jbiotec.2017.08.018] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Revised: 08/15/2017] [Accepted: 08/16/2017] [Indexed: 11/16/2022]
37
Protein Secretion in Gram-Positive Bacteria: From Multiple Pathways to Biotechnology. Curr Top Microbiol Immunol 2017;404:267-308. [PMID: 27885530 DOI: 10.1007/82_2016_49] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
38
Development of a single-cell GlxR-based cAMP biosensor for Corynebacterium glutamicum. J Biotechnol 2017;258:33-40. [PMID: 28698098 DOI: 10.1016/j.jbiotec.2017.07.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Revised: 07/03/2017] [Accepted: 07/03/2017] [Indexed: 11/23/2022]
39
Ladner T, Mühlmann M, Schulte A, Wandrey G, Büchs J. Prediction of Escherichia coli expression performance in microtiter plates by analyzing only the temporal development of scattered light during culture. J Biol Eng 2017;11:20. [PMID: 28680476 PMCID: PMC5494857 DOI: 10.1186/s13036-017-0064-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Accepted: 05/26/2017] [Indexed: 01/21/2023]  Open
40
Koepff J, Keller M, Tsolis KC, Busche T, Rückert C, Hamed MB, Anné J, Kalinowski J, Wiechert W, Economou A, Oldiges M. Fast and reliable strain characterization of Streptomyces lividans through micro-scale cultivation. Biotechnol Bioeng 2017;114:2011-2022. [DOI: 10.1002/bit.26321] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2016] [Revised: 02/15/2017] [Accepted: 04/17/2017] [Indexed: 02/06/2023]
41
Morschett H, Freier L, Rohde J, Wiechert W, von Lieres E, Oldiges M. A framework for accelerated phototrophic bioprocess development: integration of parallelized microscale cultivation, laboratory automation and Kriging-assisted experimental design. BIOTECHNOLOGY FOR BIOFUELS 2017;10:26. [PMID: 28163783 PMCID: PMC5282810 DOI: 10.1186/s13068-017-0711-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2016] [Accepted: 01/13/2017] [Indexed: 06/01/2023]
42
Mühlmann M, Kunze M, Ribeiro J, Geinitz B, Lehmann C, Schwaneberg U, Commandeur U, Büchs J. Cellulolytic RoboLector - towards an automated high-throughput screening platform for recombinant cellulase expression. J Biol Eng 2017;11:1. [PMID: 28074108 PMCID: PMC5219752 DOI: 10.1186/s13036-016-0043-2] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2016] [Accepted: 12/14/2016] [Indexed: 11/20/2022]  Open
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Hemmerich J, Rohe P, Kleine B, Jurischka S, Wiechert W, Freudl R, Oldiges M. Use of a Sec signal peptide library from Bacillus subtilis for the optimization of cutinase secretion in Corynebacterium glutamicum. Microb Cell Fact 2016;15:208. [PMID: 27927208 PMCID: PMC5142396 DOI: 10.1186/s12934-016-0604-6] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2016] [Accepted: 11/24/2016] [Indexed: 12/17/2022]  Open
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Wendisch VF. L-Lysine. Ind Biotechnol (New Rochelle N Y) 2016. [DOI: 10.1002/9783527807833.ch12] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]  Open
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Bott M, Eggeling L. Novel Technologies for Optimal Strain Breeding. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2016;159:227-254. [PMID: 27872965 DOI: 10.1007/10_2016_33] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Recent advances in high-throughput 13C-fluxomics. Curr Opin Biotechnol 2016;43:104-109. [PMID: 27838571 DOI: 10.1016/j.copbio.2016.10.010] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Revised: 10/21/2016] [Accepted: 10/25/2016] [Indexed: 12/11/2022]
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Limberg MH, Schulte J, Aryani T, Mahr R, Baumgart M, Bott M, Wiechert W, Oldiges M. Metabolic profile of 1,5-diaminopentane producing Corynebacterium glutamicum under scale-down conditions: Blueprint for robustness to bioreactor inhomogeneities. Biotechnol Bioeng 2016;114:560-575. [DOI: 10.1002/bit.26184] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2016] [Revised: 09/08/2016] [Accepted: 09/16/2016] [Indexed: 11/10/2022]
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A Toolbox of Genetically Encoded FRET-Based Biosensors for Rapid l-Lysine Analysis. SENSORS 2016;16:s16101604. [PMID: 27690044 PMCID: PMC5087393 DOI: 10.3390/s16101604] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2016] [Revised: 09/15/2016] [Accepted: 09/20/2016] [Indexed: 12/12/2022]
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Morschett H, Schiprowski D, Müller C, Mertens K, Felden P, Meyer J, Wiechert W, Oldiges M. Design and validation of a parallelized micro-photobioreactor enabling phototrophic bioprocess development at elevated throughput. Biotechnol Bioeng 2016;114:122-131. [DOI: 10.1002/bit.26051] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Revised: 07/05/2016] [Accepted: 07/15/2016] [Indexed: 12/19/2022]
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Radek A, Müller MF, Gätgens J, Eggeling L, Krumbach K, Marienhagen J, Noack S. Formation of xylitol and xylitol-5-phosphate and its impact on growth of d-xylose-utilizing Corynebacterium glutamicum strains. J Biotechnol 2016;231:160-166. [PMID: 27297548 DOI: 10.1016/j.jbiotec.2016.06.009] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2016] [Revised: 06/06/2016] [Accepted: 06/09/2016] [Indexed: 10/21/2022]
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