1
|
Zabihiyeganeh M, Mirzaei A, Tabrizian P, Rezaee A, Sheikhtaheri A, Kadijani AA, Kadijani BA, Sharifi Kia A. Prediction of subsequent fragility fractures: application of machine learning. BMC Musculoskelet Disord 2024; 25:438. [PMID: 38834975 DOI: 10.1186/s12891-024-07559-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 05/29/2024] [Indexed: 06/06/2024] Open
Abstract
BACKGROUND Machine learning (ML) has shown exceptional promise in various domains of medical research. However, its application in predicting subsequent fragility fractures is still largely unknown. In this study, we aim to evaluate the predictive power of different ML algorithms in this area and identify key features associated with the risk of subsequent fragility fractures in osteoporotic patients. METHODS We retrospectively analyzed data from patients presented with fragility fractures at our Fracture Liaison Service, categorizing them into index fragility fracture (n = 905) and subsequent fragility fracture groups (n = 195). We independently trained ML models using 27 features for both male and female cohorts. The algorithms tested include Random Forest, XGBoost, CatBoost, Logistic Regression, LightGBM, AdaBoost, Multi-Layer Perceptron, and Support Vector Machine. Model performance was evaluated through 10-fold cross-validation. RESULTS The CatBoost model outperformed other models, achieving 87% accuracy and an AUC of 0.951 for females, and 93.4% accuracy with an AUC of 0.990 for males. The most significant predictors for females included age, serum C-reactive protein (CRP), 25(OH)D, creatinine, blood urea nitrogen (BUN), parathyroid hormone (PTH), femoral neck Z-score, menopause age, number of pregnancies, phosphorus, calcium, and body mass index (BMI); for males, the predictors were serum CRP, femoral neck T-score, PTH, hip T-score, BMI, BUN, creatinine, alkaline phosphatase, and spinal Z-score. CONCLUSION ML models, especially CatBoost, offer a valuable approach for predicting subsequent fragility fractures in osteoporotic patients. These models hold the potential to enhance clinical decision-making by supporting the development of personalized preventative strategies.
Collapse
Affiliation(s)
- Mozhdeh Zabihiyeganeh
- Bone and Joint Reconstruction Research Center, Department of Orthopedics, School of Medicine, University of Medical Sciences, Baharestan Sq, Tehran, Iran
| | - Alireza Mirzaei
- Bone and Joint Reconstruction Research Center, Department of Orthopedics, School of Medicine, University of Medical Sciences, Baharestan Sq, Tehran, Iran
- Department of Orthopaedic Surgery, University of Minnesota, Minneapolis, MN, USA
| | - Pouria Tabrizian
- Bone and Joint Reconstruction Research Center, Department of Orthopedics, School of Medicine, University of Medical Sciences, Baharestan Sq, Tehran, Iran
| | - Aryan Rezaee
- Bone and Joint Reconstruction Research Center, Department of Orthopedics, School of Medicine, University of Medical Sciences, Baharestan Sq, Tehran, Iran
- Student Research Committee, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Abbas Sheikhtaheri
- Department of Health Information Management, School of Health Management and Information Sciences, Iran University of Medical Sciences, Tehran, Iran
| | - Azade Amini Kadijani
- Bone and Joint Reconstruction Research Center, Department of Orthopedics, School of Medicine, University of Medical Sciences, Baharestan Sq, Tehran, Iran
| | - Bahare Amini Kadijani
- Department of Medical Physics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
| | - Ali Sharifi Kia
- Bone and Joint Reconstruction Research Center, Department of Orthopedics, School of Medicine, University of Medical Sciences, Baharestan Sq, Tehran, Iran.
- Department of Computer Science, Faculty of Science, Western University, London, ON, Canada.
| |
Collapse
|
2
|
Wu H, Chen Z, Gu J, Jiang Y, Gao S, Chen W, Miao C. Predicting Chronic Pain and Treatment Outcomes Using Machine Learning Models Based on High-Dimensional Clinical Data From a Large Retrospective Cohort. Clin Ther 2024:S0149-2918(24)00104-8. [PMID: 38824080 DOI: 10.1016/j.clinthera.2024.04.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 04/13/2024] [Accepted: 04/27/2024] [Indexed: 06/03/2024]
Abstract
PURPOSE To identify factors and indicators that affect chronic pain and pain relief, and to develop predictive models using machine learning. METHODS We analyzed the data of 67,028 outpatient cases and 11,310 valid samples with pain from a large retrospective cohort. We used decision tree, random forest, AdaBoost, neural network, and logistic regression to discover significant indicators and to predict pain and treatment relief. FINDINGS The random forest model had the highest accuracy, F1 value, precision, and recall rates for predicting pain relief. The main factors affecting pain and treatment relief included body mass index, blood pressure, age, body temperature, heart rate, pulse, and neutrophil/lymphocyte × platelet ratio. The logistic regression model had high sensitivity and specificity for predicting pain occurrence. IMPLICATIONS Machine learning models can be used to analyze the risk factors and predictors of chronic pain and pain relief, and to provide personalized and evidence-based pain management.
Collapse
Affiliation(s)
- Han Wu
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China
| | - Zhaoyuan Chen
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China
| | - Jiahui Gu
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China
| | - Yi Jiang
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China
| | - Shenjia Gao
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China
| | - Wankun Chen
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China.
| | - Changhong Miao
- Department of Anesthesiology, Zhongshan Hospital, Fudan University, Shanghai, China; Shanghai Key laboratory of Perioperative Stress and Protection, Shanghai, China.
| |
Collapse
|
3
|
Cai S, Liu W, Cai X, Xu C, Hu Z, Quan X, Deng Y, Yao H, Chen B, Li W, Yin C, Xu Q. Predicting osteoporotic fractures post-vertebroplasty: a machine learning approach with a web-based calculator. BMC Surg 2024; 24:142. [PMID: 38724895 PMCID: PMC11080251 DOI: 10.1186/s12893-024-02427-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2023] [Accepted: 04/25/2024] [Indexed: 05/13/2024] Open
Abstract
PURPOSE The aim of this study was to develop and validate a machine learning (ML) model for predicting the risk of new osteoporotic vertebral compression fracture (OVCF) in patients who underwent percutaneous vertebroplasty (PVP) and to create a user-friendly web-based calculator for clinical use. METHODS A retrospective analysis of patients undergoing percutaneous vertebroplasty: A retrospective analysis of patients treated with PVP between June 2016 and June 2018 at Liuzhou People's Hospital was performed. The independent variables of the model were screened using Boruta and modelled using 9 algorithms. Model performance was assessed using the area under the receiver operating characteristic curve (ROC_AUC), and clinical utility was assessed by clinical decision curve analysis (DCA). The best models were analysed for interpretability using SHapley Additive exPlanations (SHAP) and the models were deployed visually using a web calculator. RESULTS Training and test groups were split using time. The SVM model performed best in both the training group tenfold cross-validation (CV) and validation group AUC, with an AUC of 0.77. DCA showed that the model was beneficial to patients in both the training and test sets. A network calculator developed based on the SHAP-based SVM model can be used for clinical risk assessment ( https://nicolazhang.shinyapps.io/refracture_shap/ ). CONCLUSIONS The SVM-based ML model was effective in predicting the risk of new-onset OVCF after PVP, and the network calculator provides a practical tool for clinical decision-making. This study contributes to personalised care in spinal surgery.
Collapse
Affiliation(s)
- Sanying Cai
- Department of Anesthesiology, Mindong Hospital Affiliated to Fujian Medical University, Fuan, China
| | - Wencai Liu
- Department of Orthopaedic Surgery, the First Affiliated Hospital of Nanchang University, Nanchang, China
| | - Xintian Cai
- Department of Graduate School, Xinjiang Medical University, Urumqi, China
| | - Chan Xu
- The State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics & Center for Molecular Imaging and Translational Medicine, School of Public Health, Xiamen University, Xiamen, China
| | - Zhaohui Hu
- Department of Spine Surgery, Liuzhou People's Hospital, Liuzhou, China
| | - Xubin Quan
- Department of Spine Surgery, Liuzhou People's Hospital, Liuzhou, China
- Graduate School of Guangxi Medical University, Nanning, Guangxi, China
| | - Yizhuo Deng
- Department of Spine Surgery, Liuzhou People's Hospital, Liuzhou, China
- Guilin Medical University, Guilin, Guangxi, China
| | - Hongjie Yao
- Department of Spine Surgery, Liuzhou People's Hospital, Liuzhou, China
- Graduate School of Guangxi Medical University, Nanning, Guangxi, China
| | - Binghao Chen
- Department of Spine Surgery, Liuzhou People's Hospital, Liuzhou, China
- Guilin Medical University, Guilin, Guangxi, China
| | - Wenle Li
- The State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics & Center for Molecular Imaging and Translational Medicine, School of Public Health, Xiamen University, Xiamen, China.
| | - Chengliang Yin
- Faculty of Medicine, Macau University of Science and Technology, Macau, 999078, P. R. China.
| | - Qingshan Xu
- Department of Orthopaedics, Mindong Hospital Affiliated to Fujian Medical University, Fuan, China.
| |
Collapse
|
4
|
Bečulić H, Begagić E, Džidić-Krivić A, Pugonja R, Softić N, Bašić B, Balogun S, Nuhović A, Softić E, Ljevaković A, Sefo H, Šegalo S, Skomorac R, Pojskić M. Sensitivity and specificity of machine learning and deep learning algorithms in the diagnosis of thoracolumbar injuries resulting in vertebral fractures: A systematic review and meta-analysis. BRAIN & SPINE 2024; 4:102809. [PMID: 38681175 PMCID: PMC11052896 DOI: 10.1016/j.bas.2024.102809] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/01/2024] [Revised: 03/13/2024] [Accepted: 04/04/2024] [Indexed: 05/01/2024]
Abstract
Introduction Clinicians encounter challenges in promptly diagnosing thoracolumbar injuries (TLIs) and fractures (VFs), motivating the exploration of Artificial Intelligence (AI) and Machine Learning (ML) and Deep Learning (DL) technologies to enhance diagnostic capabilities. Despite varying evidence, the noteworthy transformative potential of AI in healthcare, leveraging insights from daily healthcare data, persists. Research question This review investigates the utilization of ML and DL in TLIs causing VFs. Materials and methods Employing Preferred Reporting Items for Systematic Reviews and Meta-Analyzes (PRISMA) methodology, a systematic review was conducted in PubMed and Scopus databases, identifying 793 studies. Seventeen were included in the systematic review, and 11 in the meta-analysis. Variables considered encompassed publication years, geographical location, study design, total participants (14,524), gender distribution, ML or DL methods, specific pathology, diagnostic modality, test analysis variables, validation details, and key study conclusions. Meta-analysis assessed specificity, sensitivity, and conducted hierarchical summary receiver operating characteristic curve (HSROC) analysis. Results Predominantly conducted in China (29.41%), the studies involved 14,524 participants. In the analysis, 11.76% (N = 2) focused on ML, while 88.24% (N = 15) were dedicated to deep DL. Meta-analysis revealed a sensitivity of 0.91 (95% CI = 0.86-0.95), consistent specificity of 0.90 (95% CI = 0.86-0.93), with a false positive rate of 0.097 (95% CI = 0.068-0.137). Conclusion The study underscores consistent specificity and sensitivity estimates, affirming the diagnostic test's robustness. However, the broader context of ML applications in TLIs emphasizes the critical need for standardization in methodologies to enhance clinical utility.
Collapse
Affiliation(s)
- Hakija Bečulić
- Department of Neurosurgery, Cantonal Hospital Zenica, Crkvice 67, 72000, Zenica, Bosnia and Herzegovina
- Department of Anatomy, School of Medicine, University of Zenica, Travnička 1, 72000, Zenica, Bosnia and Herzegovina
| | - Emir Begagić
- Department of General Medicine, School of Medicine, University of Zenica, Travnička 1, 72000, Zenica, Bosnia and Herzegovina
| | - Amina Džidić-Krivić
- Department of Neurology, Cantonal Hospital Zenica, Crkvice 67, 72000, Zenica, Bosnia and Herzegovina
| | - Ragib Pugonja
- Department of Anatomy, School of Medicine, University of Zenica, Travnička 1, 72000, Zenica, Bosnia and Herzegovina
| | - Namira Softić
- Department of Neurosurgery, Cantonal Hospital Zenica, Crkvice 67, 72000, Zenica, Bosnia and Herzegovina
| | - Binasa Bašić
- Department of Neurology, General Hospital Travnik, Kalibunar Bb, 72270, Travnik, Bosnia and Herzegovina
| | - Simon Balogun
- Division of Neurosurgery, Department of Surgery, Obafemi Awolowo University Teaching Hospitals Complex, Ilesa Road PMB 5538, 220282, Ile-Ife, Nigeria
| | - Adem Nuhović
- Department of General Medicine, School of Medicine, University of Sarajevo, Univerzitetska 1, 71000, Sarajevo, Bosnia and Herzegovina
| | - Emir Softić
- Department of Patophysiology, School of Medicine, University of Zenica, Travnička 1, 72000, Zenica, Bosnia and Herzegovina
| | - Adnana Ljevaković
- Department of Neurology, General Hospital Travnik, Kalibunar Bb, 72270, Travnik, Bosnia and Herzegovina
| | - Haso Sefo
- Neurosurgery Clinic, University Clinical Center Sarajevo, Bolnička 25, 71000, Sarajevo, Bosnia and Herzegovina
| | - Sabina Šegalo
- Department of Laboratory Technologies, Faculty of Health Siences, University of Sarajevo, Stjepana Tomića 1, 71000, Sarajevo, Bosnia and Herzegovina
| | - Rasim Skomorac
- Department of Anatomy, School of Medicine, University of Zenica, Travnička 1, 72000, Zenica, Bosnia and Herzegovina
- Department of Surgery, School of Medicine, University of Zenica, Travnička 1, 72000, Zenica, Bosnia and Herzegovina
| | - Mirza Pojskić
- Department of Neurosurgery, University Hospital Marburg, Baldingerstr., 35033, Marburg, Germany
| |
Collapse
|
5
|
Lu T, Lu M, Wu D, Ding YY, Liu HN, Li TT, Song DQ. Predictive value of machine learning models for lymph node metastasis in gastric cancer: A two-center study. World J Gastrointest Surg 2024; 16:85-94. [PMID: 38328326 PMCID: PMC10845275 DOI: 10.4240/wjgs.v16.i1.85] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/14/2023] [Revised: 11/24/2023] [Accepted: 12/21/2023] [Indexed: 01/25/2024] Open
Abstract
BACKGROUND Gastric cancer is one of the most common malignant tumors in the digestive system, ranking sixth in incidence and fourth in mortality worldwide. Since 42.5% of metastatic lymph nodes in gastric cancer belong to nodule type and peripheral type, the application of imaging diagnosis is restricted. AIM To establish models for predicting the risk of lymph node metastasis in gastric cancer patients using machine learning (ML) algorithms and to evaluate their predictive performance in clinical practice. METHODS Data of a total of 369 patients who underwent radical gastrectomy at the Department of General Surgery of Affiliated Hospital of Xuzhou Medical University (Xuzhou, China) from March 2016 to November 2019 were collected and retrospectively analyzed as the training group. In addition, data of 123 patients who underwent radical gastrectomy at the Department of General Surgery of Jining First People's Hospital (Jining, China) were collected and analyzed as the verification group. Seven ML models, including decision tree, random forest, support vector machine (SVM), gradient boosting machine, naive Bayes, neural network, and logistic regression, were developed to evaluate the occurrence of lymph node metastasis in patients with gastric cancer. The ML models were established following ten cross-validation iterations using the training dataset, and subsequently, each model was assessed using the test dataset. The models' performance was evaluated by comparing the area under the receiver operating characteristic curve of each model. RESULTS Among the seven ML models, except for SVM, the other ones exhibited higher accuracy and reliability, and the influences of various risk factors on the models are intuitive. CONCLUSION The ML models developed exhibit strong predictive capabilities for lymph node metastasis in gastric cancer, which can aid in personalized clinical diagnosis and treatment.
Collapse
Affiliation(s)
- Tong Lu
- Department of Emergency Medicine, Jining No. 1 People’s Hospital, Jining 272000, Shandong Province, China
| | - Miao Lu
- Wuxi Mental Health Center, Wuxi 214000, Jiangsu Province, China
| | - Dong Wu
- Department of Emergency Medicine, Jining No. 1 People’s Hospital, Jining 272000, Shandong Province, China
| | - Yuan-Yuan Ding
- Department of Gastroenterology, Jining No. 1 People’s Hospital, Jining 272000, Shandong Province, China
| | - Hao-Nan Liu
- Department of Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou 221002, Jiangsu Province, China
| | - Tao-Tao Li
- Department of Emergency Medicine, Jining No. 1 People’s Hospital, Jining 272000, Shandong Province, China
| | - Da-Qing Song
- Department of Emergency Medicine, Jining No. 1 People’s Hospital, Jining 272000, Shandong Province, China
| |
Collapse
|
6
|
Lu T, Fang Y, Liu H, Chen C, Li T, Lu M, Song D. Comparison of Machine Learning and Logic Regression Algorithms for Predicting Lymph Node Metastasis in Patients with Gastric Cancer: A two-Center Study. Technol Cancer Res Treat 2024; 23:15330338231222331. [PMID: 38190617 PMCID: PMC10775719 DOI: 10.1177/15330338231222331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Revised: 11/01/2023] [Accepted: 11/20/2023] [Indexed: 01/10/2024] Open
Abstract
OBJECTIVES This two-center study aimed to establish a model for predicting the risk of lymph node metastasis in gastric cancer patients using machine learning (ML) and logistic regression (LR) algorithms, and to evaluate its predictive performance in clinical practice. METHODS Data of a total of 369 patients who underwent radical gastrectomy in the Department of General Surgery of Affiliated Hospital of Xuzhou Medical University (Xuzhou, China) from March 2016 to November 2019 were collected and retrospectively analyzed as the training group. In addition, data of 123 patients who underwent radical gastrectomy in the Department of General Surgery of Jining First People's Hospital (Jining, China) were collected and analyzed as the verification group. Besides, 7 ML and logistic models were developed, including decision tree, random forest, support vector machine (SVM), gradient boosting machine (GBM), naive Bayes, neural network, and LR, in order to evaluate the occurrence of lymph node metastasis in patients with gastric cancer. The ML model was established following 10 cross-validation iterations within the training dataset, and subsequently, each model was assessed using the test dataset. The model's performance was evaluated by comparing the area under the receiver operating characteristic curve of each model. RESULTS Compared with the traditional logistic model, among the 7 ML algorithms, except for SVM, the other models exhibited higher accuracy and reliability, and the influences of various risk factors on the model were more intuitive. CONCLUSION For the prediction of lymph node metastasis in gastric cancer patients, the ML algorithm outperformed traditional LR, and the GBM algorithm exhibited the most robust predictive capability.
Collapse
Affiliation(s)
- Tong Lu
- Department of emergency medicine, Jining No.1 People's Hospital, Jining, China
| | - Yu Fang
- Jiangsu Normal University, Xuzhou, China
| | - Haonan Liu
- Department of Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China
| | - Chong Chen
- Department of Gastroenterology, Xuzhou No.1 People's Hospital, Xuzhou, China
| | - Taotao Li
- Department of emergency medicine, Jining No.1 People's Hospital, Jining, China
| | - Miao Lu
- Wuxi Mental Health Center, Wuxi, China
| | - Daqing Song
- Department of emergency medicine, Jining No.1 People's Hospital, Jining, China
| |
Collapse
|