1
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Liu W, Luo B, Kang K, Xia Y, Zhang H. Non-destructive detection of single corn seed vigor based on visible/near-infrared spatially resolved spectroscopy combined with chemometrics. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 312:124089. [PMID: 38428212 DOI: 10.1016/j.saa.2024.124089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Revised: 02/25/2024] [Accepted: 02/25/2024] [Indexed: 03/03/2024]
Abstract
Seed vigor is an essential quality evaluation index for seed selection. However, accurately detecting the vigor of a single corn seed is challenging. In this study, we constructed a single-fiber spatially resolved detection device using visible/near-infrared spectroscopy to investigate the patterns and correlations between spatially resolved spectroscopy (SRS) at 500-1000 nm and seed vigor. The device collected spectral data at a light source-detector distance of 5-6.6 mm on the embryo side (S1) and endosperm side (S2) of the corn seeds. The proposed spectral ratio method based on SRS and spectral combination analysis achieved an improvement in the detection accuracy of different corn seed vigor. Modeling by SG-CARS-PLSDA using the ratio method showed further improvement in the prediction ability. The highest accuracy for both S1 and S2 in the Zhengdan 958 variety was 91.67 %, while those of S1 and S2 for the Shaandan 650 variety were 86.67 % and 88.33 %, respectively. In addition, SRS was found to be more advantageous in S2 acquisition, verifying the potential of SRS in the non-destructive testing of seed vigor. This provides a favorable reference for the comprehensive evaluation of other internal quality indices of seeds.
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Affiliation(s)
- Wenxi Liu
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi'an, Shaanxi 710021, China
| | - Bin Luo
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
| | - Kai Kang
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
| | - Yu Xia
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi'an, Shaanxi 710021, China.
| | - Han Zhang
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China.
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2
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Xia Y, Liu W, Meng J, Hu J, Liu W, Kang J, Luo B, Zhang H, Tang W. Principles, developments, and applications of spatially resolved spectroscopy in agriculture: a review. FRONTIERS IN PLANT SCIENCE 2024; 14:1324881. [PMID: 38269139 PMCID: PMC10805836 DOI: 10.3389/fpls.2023.1324881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 12/19/2023] [Indexed: 01/26/2024]
Abstract
Agriculture is the primary source of human survival, which provides the most basic living and survival conditions for human beings. As living standards continue to improve, people are also paying more attention to the quality and safety of agricultural products. Therefore, the detection of agricultural product quality is very necessary. In the past decades, the spectroscopy technique has been widely used because of its excellent results in agricultural quality detection. However, traditional spectral inspection methods cannot accurately describe the internal information of agricultural products. With the continuous research and development of optical properties, it has been found that the internal quality of an object can be better reflected by separating the properties of light, such as its absorption and scattering properties. In recent years, spatially resolved spectroscopy has been increasingly used in the field of agricultural product inspection due to its simple compositional structure, low-value cost, ease of operation, efficient detection speed, and outstanding ability to obtain information about agricultural products at different depths. It can also separate optical properties based on the transmission equation of optics, which allows for more accurate detection of the internal quality of agricultural products. This review focuses on the principles of spatially resolved spectroscopy, detection equipment, analytical methods, and specific applications in agricultural quality detection. Additionally, the optical properties methods and direct analysis methods of spatially resolved spectroscopy analysis methods are also reported in this paper.
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Affiliation(s)
- Yu Xia
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Wenxi Liu
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Jingwu Meng
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Jinghao Hu
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Wenbo Liu
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Jie Kang
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Bin Luo
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Han Zhang
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Wei Tang
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
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3
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Si W, Xiong J, Huang Y, Jiang X, Hu D. Quality Assessment of Fruits and Vegetables Based on Spatially Resolved Spectroscopy: A Review. Foods 2022; 11:foods11091198. [PMID: 35563921 PMCID: PMC9104625 DOI: 10.3390/foods11091198] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Revised: 04/11/2022] [Accepted: 04/19/2022] [Indexed: 01/15/2023] Open
Abstract
Damage occurs easily and is difficult to find inside fruits and vegetables during transportation or storage, which not only brings losses to fruit and vegetable distributors, but also reduces the satisfaction of consumers. Spatially resolved spectroscopy (SRS) is able to detect the quality attributes of fruits and vegetables at different depths, which is of great significance to the quality classification and defect detection of horticultural products. This paper is aimed at reviewing the applications of spatially resolved spectroscopy for measuring the quality attributes of fruits and vegetables in detail. The principle of light transfer in biological tissues, diffusion approximation theory and methodologies are introduced, and different configuration designs for spatially resolved spectroscopy are compared and analyzed. Besides, spatially resolved spectroscopy applications based on two aspects for assessing the quality of fruits and vegetables are summarized. Finally, the problems encountered in previous studies are discussed, and future development trends are presented. It can be concluded that spatially resolved spectroscopy demonstrates great application potential in the field of fruit and vegetable quality attribute evaluation. However, due to the limitation of equipment configurations and data processing speed, the application of spatially resolved spectroscopy in real-time online detection is still a challenge.
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Affiliation(s)
- Wan Si
- College of Mechanical and Electronic Engineering, Nanjing Forestry University, Nanjing 210037, China; (W.S.); (J.X.); (X.J.)
| | - Jie Xiong
- College of Mechanical and Electronic Engineering, Nanjing Forestry University, Nanjing 210037, China; (W.S.); (J.X.); (X.J.)
| | - Yuping Huang
- College of Mechanical and Electronic Engineering, Nanjing Forestry University, Nanjing 210037, China; (W.S.); (J.X.); (X.J.)
- Correspondence:
| | - Xuesong Jiang
- College of Mechanical and Electronic Engineering, Nanjing Forestry University, Nanjing 210037, China; (W.S.); (J.X.); (X.J.)
| | - Dong Hu
- College of Optical, Mechanical and Electrical Engineering, Zhejiang A&F University, Hangzhou 311300, China;
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4
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Making Sense of Light: The Use of Optical Spectroscopy Techniques in Plant Sciences and Agriculture. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12030997] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
As a result of the development of non-invasive optical spectroscopy, the number of prospective technologies of plant monitoring is growing. Being implemented in devices with different functions and hardware, these technologies are increasingly using the most advanced data processing algorithms, including machine learning and more available computing power each time. Optical spectroscopy is widely used to evaluate plant tissues, diagnose crops, and study the response of plants to biotic and abiotic stress. Spectral methods can also assist in remote and non-invasive assessment of the physiology of photosynthetic biofilms and the impact of plant species on biodiversity and ecosystem stability. The emergence of high-throughput technologies for plant phenotyping and the accompanying need for methods for rapid and non-contact assessment of plant productivity has generated renewed interest in the application of optical spectroscopy in fundamental plant sciences and agriculture. In this perspective paper, starting with a brief overview of the scientific and technological backgrounds of optical spectroscopy and current mainstream techniques and applications, we foresee the future development of this family of optical spectroscopic methodologies.
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5
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Morales-Bonilla S, Martines-Arano H, Torres-Torres D, Ochoa-Ortega G, Carrillo-Delgado C, Trejo-Valdez M, Torres-Torres C. Dynamic and plasmonic response exhibited by Au nanoparticles suspended in blood plasma and cerebrospinal fluids. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.02.073] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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6
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Determining the optical properties of blood using He-Ne laser and double integrating sphere set-up. POLISH JOURNAL OF MEDICAL PHYSICS AND ENGINEERING 2019. [DOI: 10.2478/pjmpe-2019-0001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Abstract
The behaviour of light interaction with biological tissue is determined by micro-optical parameters: refractive index (n), absorption coefficient (µa
), scattering coefficient (µs
), and anisotropy (g). The goal of this study is to measure the optical properties of normal whole blood using He-Ne laser (wavelength 632.8 nm).
The refractive index is measured using the traveller microscope. The integrating sphere method is used to measure the macro-optical parameters: total diffusive reflectance, transmittance, and collimated transmittance at wavelength 632.8 nm. The macro-optical parameters are fed to Inverse Adding Doubling (IAD) theoretical technique, to estimate the micro-optical parameters (µs
, µa
, g). An alternative practical method is used to measure the g value based on utilising the goniometric table. The study reveals that the refractive index (n) equals 1.395±0.0547, absorption coefficient (µa
) equals 2.37 mm−1, scattering coefficient (µs
) equals 55.69 mm−1, and anisotropy (g) equals 0.82.
In conclusion, these findings approved, in general, the applicability of the suggested experimental set up. The set up depend on using three devices: the integrating sphere method to estimate (µs
, µa
, g), traveller microscope (n) and goniometer (g).
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7
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Davis AB, Marshak A. Multiple Scattering in Clouds: Insights from Three-Dimensional Diffusion/P1 Theory. NUCL SCI ENG 2017. [DOI: 10.13182/nse01-a2190] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Anthony B. Davis
- Los Alamos National Laboratory, Space and Remote Sensing Sciences Group (NIS-2) Los Alamos, New Mexico 87545
| | - Alexander Marshak
- NASA's Goddard Space Flight Center, Climate and Radiation Branch (Code 913) Greenbelt, Maryland 20771 and Joint Center for Earth Systems Technology, University of Maryland - Baltimore County Baltimore, Maryland 81250
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8
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Li W, Liu Y, Qian Z. Determination of detection depth of optical probe in pedicle screw measurement device. Biomed Eng Online 2014; 13:148. [PMID: 25361700 PMCID: PMC4234868 DOI: 10.1186/1475-925x-13-148] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2014] [Accepted: 10/22/2014] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND There is a high probability of accidental perforation of the vertebral pedicle wall in pedicle screw insertion surgery. A pedicle screw (PS) measurement device with an optical probe has been reported to send out a warning signal before the PS tip breaking the vertebral pedicle wall. METHODS In this study, we explored the detection depth of optical probe in this measurement device, which was closely related to the effective alarm distance. In the boundary, the vertebrae tissues could be treated as 2-layer models including spongy bones and compact bones. The Monte Carlo simulation and phantom models were performed to analyse and define the detection depth. Then the porcine vertebrae models were performed to obtain optical spectrum and reduced scattering coefficient, based on which the detection depths were deduced. Moreover, a comparison was made to explore the most significant pattern factor from the experiment results. RESULTS According to the pattern factor, an alarm threshold was successfully deduced to define the alarm distance during pedicle screw monitoring. CONCLUSIONS Thus, the proposed alarm standard based on detection depth provides a potential for guiding pedicle screw in surgery.
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Affiliation(s)
- Weitao Li
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Yudao Street, Nanjing, China
| | - Yangyang Liu
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Yudao Street, Nanjing, China
| | - Zhiyu Qian
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Yudao Street, Nanjing, China
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9
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Grabtchak S, Whelan WM. Separation of absorption and scattering properties of turbid media using relative spectrally resolved cw radiance measurements. BIOMEDICAL OPTICS EXPRESS 2012; 3:2371-80. [PMID: 23082279 PMCID: PMC3469994 DOI: 10.1364/boe.3.002371] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Revised: 08/27/2012] [Accepted: 08/27/2012] [Indexed: 05/10/2023]
Abstract
We present a new method for extracting the effective attenuation coefficient and the diffusion coefficient from relative spectrally resolved cw radiance measurements using the diffusion approximation. The method is validated on both simulated and experimental radiance data sets using Intralipid-1% as a test platform. The effective attenuation coefficient is determined from a simple algebraic expression constructed from a ratio of two radiance measurements at two different source-detector separations and the same 90° angle. The diffusion coefficient is determined from another ratio constructed from two radiance measurements at two angles (0° and 180°) and the same source-detector separation. The conditions of the validity of the method as well as possible practical applications are discussed.
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Affiliation(s)
- Serge Grabtchak
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
- Department of Electrical and Computer Engineering, Dalhousie University, Halifax, NS B3J1Z1, Canada
- Department of Physics, Dalhousie University, Halifax, NS B3H3J5, Canada
| | - William M. Whelan
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
- Atlantic Veterinary College, Charlottetown, PEI C1A4P3, Canada
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10
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Dhawan AP, D'Alessandro B, Fu X. Optical imaging modalities for biomedical applications. IEEE Rev Biomed Eng 2012; 3:69-92. [PMID: 22275202 DOI: 10.1109/rbme.2010.2081975] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Optical photographic imaging is a well known imaging method that has been successfully translated into biomedical applications such as microscopy and endoscopy. Although several advanced medical imaging modalities are used today to acquire anatomical, physiological, metabolic, and functional information from the human body, optical imaging modalities including optical coherence tomography, confocal microscopy, multiphoton microscopy, multispectral endoscopy, and diffuse reflectance imaging have recently emerged with significant potential for non-invasive, portable, and cost-effective imaging for biomedical applications spanning tissue, cellular, and molecular levels. This paper reviews methods for modeling the propagation of light photons in a biological medium, as well as optical imaging from organ to cellular levels using visible and near-infrared wavelengths for biomedical and clinical applications.
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Affiliation(s)
- Atam P Dhawan
- Department of Electrical and Computer Engineering, New Jersey Institute of Technology, Newark, NJ 07102, USA.
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11
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Oelkrug D, Brun M, Rebner K, Boldrini B, Kessler R. Penetration of light into multiple scattering media: model calculations and reflectance experiments. Part I: the axial transfer. APPLIED SPECTROSCOPY 2012; 66:934-943. [PMID: 22800964 DOI: 10.1366/11-06518] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The article presents two general equations of radiation penetration into layers of diffuse reflectors. One of the equations describes the depth origins of reflection, the other the depth profiles of absorption. The equations are evaluated within the theory of radiative transfer applying various degrees of analytical approximations and Monte Carlo simulations. The data are presented for different scattering and absorption coefficients, arbitrary layer thicknesses, collimated and diffused irradiation, and anisotropic forward scattering. The calculated mean depths of reflection are always lower than the mean depths of absorption. For nearly non-absorbing layers, the mean depths of absorption are about one third of the physical layer thickness. In contrast, penetration saturates for strong absorbers at very low depth levels. From the simulated data, methods are derived for the determination of the penetration depth from reflectance and transmittance data of thin layers or from radially diffused reflectance profiles upon spot irradiation. The methods are experimentally verified for a series of metal oxide powders with particle sizes ranging from much smaller to much larger than the wavelength of irradiation and for microcrystalline cellulose stained with different concentrations of an organic dye.
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Affiliation(s)
- Dieter Oelkrug
- Institute of Physical and Theoretical Chemistry, University of Tübingen, Auf der Morgenstelle 8, D-72076 Tübingen, Germany.
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12
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Zonios G, Dimou A. Modeling diffuse reflectance from homogeneous semi-infinite turbid media for biological tissue applications: a Monte Carlo study. BIOMEDICAL OPTICS EXPRESS 2011; 2:3284-94. [PMID: 22162819 PMCID: PMC3233248 DOI: 10.1364/boe.2.003284] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2011] [Revised: 11/06/2011] [Accepted: 11/08/2011] [Indexed: 05/18/2023]
Abstract
Diffuse reflectance spectroscopy is one of the simplest and widely used techniques for the non-invasive study of biological tissues but no exact analytical solution exists for the problem of diffuse reflectance from turbid media such as biological tissues. In this work, a general treatment of the problem of diffuse reflectance from a homogeneous semi-infinite turbid medium is presented using Monte Carlo simulations. Based on the results of the Monte Carlo method, simple semi-empirical analytical solutions are developed valid for a wide range of collection geometries corresponding to various optical detector diameters. This approach may be useful for the quick and accurate modeling of diffuse reflectance from tissues.
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Affiliation(s)
- George Zonios
- Department of Materials Science and Engineering, University of Ioannina, 45110 Ioannina, Greece
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13
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Yust BG, Mimun LC, Sardar DK. Optical absorption and scattering of bovine cornea, lens, and retina in the near-infrared region. Lasers Med Sci 2011; 27:413-22. [PMID: 21556925 DOI: 10.1007/s10103-011-0927-9] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2010] [Accepted: 04/11/2011] [Indexed: 11/30/2022]
Abstract
The optical properties of bovine ocular tissues have been determined at laser wavelengths in the near-infrared (NIR) region. The inverse adding doubling (IAD), Kubelka-Munk (KM), and inverse Monte Carlo (IMC) methods were applied to the measured values of the total diffuse transmission, total diffuse reflection, and collimated transmission to determine the optical absorption and scattering coefficients of the bovine cornea, lens and retina from 750 to 1,000 nm using a CW Ti:sapphire laser. The optical properties obtained from these three methods have been compared and are discussed.
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Affiliation(s)
- Brian G Yust
- Department of Physics and Astronomy, University of Texas at San Antonio, San Antonio, TX 78249-0697, USA
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14
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Hoffman AS, Ratner BD, Garfinkle A, Horbett TA, Reynolds LO, Hanson SR. The Small Diameter Vascular Graft - A Challenging Biomaterials Problem. ACTA ACUST UNITED AC 2011. [DOI: 10.1557/proc-55-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
ABSTRACTThe surface composition of a biomaterial can have an important influence on biologic responses. In this paper we report on a surface treatment using a gas discharge which deposits a thin fluorocarbon polymer coating onto tie surface of a synthetic vascular graft. The surface chemistry of the graft is significantly changed, while there is no measurable change in porosity, compliance or surface topography. Treatments with tetrafluoroethylene (TFE) gas yield dramatic improvements in both thrombo and emboli-resistance of the graft, based on in vitro measurements and ex vivo shunt tests in a baboon.
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15
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LeBlanc SE, Atanya M, Burns K, Munger R. Quantitative impact of small angle forward scatter on whole blood oximetry using a Beer–Lambert absorbance model. Analyst 2011; 136:1637-43. [DOI: 10.1039/c0an00996b] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- Serge Emile LeBlanc
- University of Ottawa Eye Institute, Ottawa Hospital Research Institute, 501 Smyth Road, Ottawa, ON K1H 8L6, Canada
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16
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Ergül O, Arslan-Ergül A, Gürel L. Computational study of scattering from healthy and diseased red blood cells. JOURNAL OF BIOMEDICAL OPTICS 2010; 15:045004. [PMID: 20799799 DOI: 10.1117/1.3467493] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We present a comparative study of scattering from healthy red blood cells (RBCs) and diseased RBCs with deformed shapes. Scattering problems involving three-dimensional RBCs are formulated accurately with the electric and magnetic current combined-field integral equation and solved efficiently by the multilevel fast multipole algorithm. We compare scattering cross section values obtained for different RBC shapes and different orientations. In this way, we determine strict guidelines to distinguish deformed RBCs from healthy RBCs and to diagnose various diseases using scattering cross section values. The results may be useful for designing new and improved flow cytometry procedures.
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Affiliation(s)
- Ozgür Ergül
- University of Strathclyde, Department of Mathematics and Statistics, Glasgow, Scotland, United Kingdom.
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17
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In vitro assessment of optical properties of blood by applying the extended Huygens-Fresnel principle to time-domain optical coherence tomography signal at 1300 nm. Int J Biomed Imaging 2010; 2008:591618. [PMID: 18618002 PMCID: PMC2443824 DOI: 10.1155/2008/591618] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2008] [Accepted: 06/12/2008] [Indexed: 11/20/2022] Open
Abstract
A direct method for the measurement of the optical attenuation coefficient and the scattering anisotropy parameter based on applying the extended Huygens-Fresnel principle to optical coherence tomography images of blood is demonstrated. The images are acquired with a low-power probing beam at the wavelength of 1300 nm. Values of 12.15 mm−1 and 0.95 are found for the total attenuation coefficient and the scattering anisotropy factor, respectively. Also, as a preliminary step, the optical refraction index is determined with a precision of two decimal numbers directly from optical coherence images. The total attenuation coefficient and the scattering anisotropy factor are determined with precisions within experimental error margins of 5% and 2%, respectively. Readable OCT signal is obtained for a maximum propagation of light into blood of 0.25 mm. At the maximum probed depth, the measured signal is almost 103 smaller than its initial intensity when entering the sample.
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18
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Optical absorption and scattering of bovine cornea, lens and retina in the visible region. Lasers Med Sci 2009; 24:839-47. [PMID: 19495828 DOI: 10.1007/s10103-009-0677-0] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2008] [Accepted: 04/21/2009] [Indexed: 10/20/2022]
Abstract
Optical properties of bovine ocular tissues were determined at laser wavelengths in the visible region. The inverse adding doubling (IAD), Kubelka-Munk (KM), and inverse Monte Carlo (IMC) methods were applied to the measured values of the total diffuse transmission, total diffuse reflection, and collimated transmission to determine the optical absorption and scattering coefficients of the bovine cornea, lens and retina at 457.9 nm, 488 nm, and 514.5 nm laser lines from an argon ion laser. The optical properties obtained from these three methods were compared, and their validity is discussed.
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19
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Chang H, Kim YL, Hassan A, Fitzgerald PJ. Whole blood reflectance for assessment of hematologic condition and detection of angiographic contrast media. APPLIED OPTICS 2009; 48:2435-2443. [PMID: 19412200 DOI: 10.1364/ao.48.002435] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
We present simple whole blood reflectance analyses in the range 500-900 nm, using intact whole blood to simultaneously quantify hematocrit and oxygen saturation from a single spectral reading. We applied these results for the development of an intravascular catheter-based reflectance sensing system to detect and remove contrast media injected during angiography so as to reduce the risk of complications associated with the injected contrast media. We further tested the practicality of the optical detection of angiographic contrast media in a pilot animal study in vivo. We successfully demonstrated the feasibility of real-time in vivo contrast detection and removal during angiography. Our simple method for the detection and removal of angiographic contrast media will facilitate the development of intravascular optical sensing systems.
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Affiliation(s)
- Hyeonsoo Chang
- Center for Cardiovascular Technology, School of Medicine, Stanford University, 300 Pasteur Drive, Room H3554, Stanford, California 94305, USA.
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20
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Huffman DE, Serebrennikova YM, Smith JM, Leparc GF, García-Rubio LH. New method for the detection of micro-organisms in blood: application of quantitative interpretation model to aerobic blood cultures. JOURNAL OF BIOMEDICAL OPTICS 2009; 14:034043. [PMID: 19566335 DOI: 10.1117/1.3156837] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
The physical and chemical changes occurring in blood that has been inoculated into a blood culture bottle can be used as means to detect the presence of microorganisms in blood cultures. These changes include primarily the conversion of oxy- to deoxyhemoglobin within the red blood cells (RBCs) and changes in the cell number densities. These changes in the physical and chemical properties of blood can be readily detected using spectrophometric methods thus enabling the continuous monitoring of blood culture vials to provide quantitative information on the growth behavior of the microorganisms present. This paper reports on the application of spectrophotometric information obtained from diffuse reflectance measurements of aerobic blood cultures to detect microbial growth and compares the results to those obtained using the standard blood culture system.
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Affiliation(s)
- Debra E Huffman
- Claro Scientific, LLC, 10100 Dr. Martin Luther King Jr. Street North, Saint Petersburg, Florida 33716, USA.
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21
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Serebrennikova YM, Smith JM, Huffman DE, Leparc GF, García-Rubio LH. Quantitative interpretations of Visible-NIR reflectance spectra of blood. OPTICS EXPRESS 2008; 16:18215-18229. [PMID: 18958099 DOI: 10.1364/oe.16.018215] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
This paper illustrates the implementation of a new theoretical model for rapid quantitative analysis of the Vis-NIR diffuse reflectance spectra of blood cultures. This new model is based on the photon diffusion theory and Mie scattering theory that have been formulated to account for multiple scattering populations and absorptive components. This study stresses the significance of the thorough solution of the scattering and absorption problem in order to accurately resolve for optically relevant parameters of blood culture components. With advantages of being calibration-free and computationally fast, the new model has two basic requirements. First, wavelength-dependent refractive indices of the basic chemical constituents of blood culture components are needed. Second, multi-wavelength measurements or at least the measurements of characteristic wavelengths equal to the degrees of freedom, i.e. number of optically relevant parameters, of blood culture system are required. The blood culture analysis model was tested with a large number of diffuse reflectance spectra of blood culture samples characterized by an extensive range of the relevant parameters.
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Smith JM, Serebrennikova YM, Huffman DE, Leparc GF, García-Rubio LH. A new method for the detection of microorganisms in blood cultures: Part I. Theoretical analysis and simulation of blood culture processes. CAN J CHEM ENG 2008. [DOI: 10.1002/cjce.20095] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Jennifer M. Smith
- Claro Scientific, LLC., 10100 Dr. Martin Luther King Jr. St. N., St. Petersburg, FL 33716, U.S.A
| | - Yulia M. Serebrennikova
- Claro Scientific, LLC., 10100 Dr. Martin Luther King Jr. St. N., St. Petersburg, FL 33716, U.S.A
- College of Marine Science University of South Florida, 140 Seventh Avenue S, St. Petersburg, FL 33701, U.S.A
| | - Debra E. Huffman
- Claro Scientific, LLC., 10100 Dr. Martin Luther King Jr. St. N., St. Petersburg, FL 33716, U.S.A
| | - German F. Leparc
- Florida Blood Services, 10100 Dr. Martin Luther King Jr. St. N., St. Petersburg, FL 33716, U.S.A
| | - Luis H. García-Rubio
- Claro Scientific, LLC., 10100 Dr. Martin Luther King Jr. St. N., St. Petersburg, FL 33716, U.S.A
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Zonios G, Bassukas I, Dimou A. Comparative evaluation of two simple diffuse reflectance models for biological tissue applications. APPLIED OPTICS 2008; 47:4965-73. [PMID: 18806859 DOI: 10.1364/ao.47.004965] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We present a comparative evaluation of two simple diffuse reflectance models for biological tissue applications. One model is based on a widely accepted and used in biomedical optics implementation of diffusion theory, and the other one is based on a semiempirical approach derived from basic physical principles. We test the models on tissue phantoms and on human skin, utilizing a standard six-around-one optical fiber probe for light delivery and collection. We show that both models are suitable for use with an optical fiber probe and illustrate the potential, applicability, and validity range of the models.
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Affiliation(s)
- George Zonios
- Department of Materials Science and Engineering, University of Ioannina, 45110 Ioannina, Greece.
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24
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Yasuda T, Saito T, Kihara T, Takatani S, Funakubo A. Development of a reflected optical fiber system for measuring oxygen saturation in an integrated artificial heart-lung system. Artif Organs 2008; 32:229-34. [PMID: 18201289 DOI: 10.1111/j.1525-1594.2007.00523.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The purpose of this study was to develop a blood oxygen saturation (OS) monitoring system for use with an integrated artificial heart-lung system (IAHLS). The OS monitoring system consists of two paired optical fiber probes (OFPs) and a measurement system. To investigate the effect of the OFP configuration and incident light wavelength on the relationship between OS and the reflectance ratio for wavelengths of 810 and 645 nm, we performed theoretical analyses of the relationship between OS and R810/R645 using a diffusion equation. The prototype OFP located on the blood outlet port of our IAHLS housing was evaluated using an in vitro test. An OS range of 65-100% was adjusted to supply oxygen and nitrogen gas to the IAHLS. The blood flow rate was maintained at 3 L/min by the rotational speed of an impeller in the IAHLS. The OS-corrected blood from the IAHLS was measured using a commercial gas analyzer. The correlation coefficients (r(2)) between the theoretical ratio of R810/R645 and OS, and between measured OS and the reflectance ratio of R810/R645 were 0.97 and 0.78, respectively. In conclusion, we confirmed that the development of this oximetry system is applicable for IAHLS.
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Affiliation(s)
- Toshitaka Yasuda
- Graduate School of Medicine, Yamaguchi University, Ube, Yamaguchi, Japan.
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25
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Fredriksson I, Larsson M, Strömberg T. Optical microcirculatory skin model: assessed by Monte Carlo simulations paired with in vivo laser Doppler flowmetry. JOURNAL OF BIOMEDICAL OPTICS 2008; 13:014015. [PMID: 18315373 DOI: 10.1117/1.2854691] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
An optical microvascular skin model, valid at 780 nm, was developed. The model consisted of six layers with individual optical properties and variable thicknesses and blood concentrations at three different blood flow velocities. Monte Carlo simulations were used to evaluate the impact of various model parameters on the traditional laser Doppler flowmetry (LDF) measures. A set of reference Doppler power spectra was generated by simulating 7000 configurations, varying the thickness and blood concentrations. Simulated spectra, at two different source detector separations, were compared with in vivo recorded spectra, using a nonlinear search algorithm for minimizing the deviation between simulated and measured spectra. The model was validated by inspecting the thickness and blood concentrations that generated the best fit. These four parameters followed a priori expectations for the measurement situations, and the simulated spectra agreed well with the measured spectra for both detector separations. Average estimated dermal blood concentration was 0.08% at rest and 0.63% during heat provocation (44 degrees C) on the volar side of the forearm and 1.2% at rest on the finger pulp. The model is crucial for developing a technique for velocity-resolved absolute LDF measurements with known sampling volume and can also be useful for other bio-optical modalities.
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Affiliation(s)
- Ingemar Fredriksson
- Linköping University, Department of Biomedical Engineering, University Hospital, S-581 85 Linköping, Sweden.
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26
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Baravian C, Caton F, Dillet J, Toussaint G, Flaud P. Incoherent light transport in an anisotropic random medium: a probe of human erythrocyte aggregation and deformation. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2007; 76:011409. [PMID: 17677443 DOI: 10.1103/physreve.76.011409] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2006] [Revised: 04/02/2007] [Indexed: 05/16/2023]
Abstract
This paper investigates the flow induced disaggregation, deformation and orientation of several modified human red blood cells suspended in concentrated, physiological like conditions (volume fraction in erythrocytes of 0.4). The aim is to determine simultaneously, and under flow, the aggregate sizes as well as the deformation and orientation of the cells. The measurement method uses steady, incoherent, unpolarized light transport while the sample is sheared in a flow cell controlled by a rheometer. Several blood samples were prepared to alter the erythrocyte's aggregating, deformability and shape properties. The measurements using these samples show a clear relationship between the intrinsic properties of the cells and the evolution of aggregate sizes, average cell orientation and anisotropy as a function of the applied shear, which may lead to clinical applications. In other words, the careful analysis of the incoherent light transport in concentrated media provides quantitative insight into their microscopic details. In particular, the topological properties (average anisotropy and orientation) and size of the suspended objects can be determined.
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Affiliation(s)
- C Baravian
- Laboratoire d'Energétique et de Mécanique Théorique et Appliquée, CNRS UMR 7563, Nancy University, 2 Avenue de la Forêt de Haye, B.P. 160, 54504 Vandoeuvre Cedex, France.
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27
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Mazeron P, Didelon J, Muller S, Stoltz JF. A Theoretical Approach of the Measurement of Osmotic Fragility of Erythrocytes by Optical Transmission¶. Photochem Photobiol 2007. [DOI: 10.1562/0031-8655(2000)0720172ataotm2.0.co2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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28
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Jia W, Choi B, Franco W, Lotfi J, Majaron B, Aguilar G, Nelson JS. Treatment of cutaneous vascular lesions using multiple-intermittent cryogen spurts and two-wavelength laser pulses: Numerical and animal studies. Lasers Surg Med 2007; 39:494-503. [PMID: 17659588 DOI: 10.1002/lsm.20524] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
BACKGROUND AND OBJECTIVES Presently, cutaneous vascular lesions are treated using a single cryogen spurt and single laser pulse (SCS-SLP), which do not necessarily produce complete lesion removal in the majority of patients. In this study, the feasibility of applying multiple cryogen spurts intermittently with multiple two-wavelength laser pulses (MCS-MTWLP) was studied using numerical and animal models. STUDY DESIGN/MATERIALS AND METHODS Two treatment procedures were simulated: (1) SCS+532 nm SLP; and (2) MCS+532/1064 nm MTWLP. Light transport and heat diffusion in human skin were simulated with the Monte Carlo method and finite element model, respectively. Possible epidermal damage and blood vessel photocoagulation were evaluated with an Arrhenius-type kinetic model. Blood vessels in the rodent window chamber model (RWCM) were irradiated with either SLP or MTWLP. Laser-induced structural and functional changes in the vessels were documented by digital photography and laser speckle imaging (LSI). RESULTS The numerical results show that the MCS-MTWLP approach can provide sufficient epidermal protection while simultaneously achieving photocoagulation of larger blood vessels as compared to SCS-SLP. Animal studies show that MTWLP has significant advantages over SLP by inducing irreversible damage to larger blood vessels without adverse effects. CONCLUSIONS MCS-MTWLP may be a promising approach to improve therapeutic outcome for patients with cutaneous vascular lesions featuring large blood vessels.
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Affiliation(s)
- Wangcun Jia
- Beckman Laser Institute, University of California, Irvine, California 92612-1475, USA.
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29
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Meinke M, Müller G, Gersonde I, Friebel M. Determination of oxygen saturation and hematocrit of flowing human blood using two different spectrally resolving sensors. BIOMED ENG-BIOMED TE 2006; 51:347-54. [PMID: 17155871 DOI: 10.1515/bmt.2006.068] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
The blood parameters oxygen saturation and hematocrit were determined by two different spectral sensors using reflectance spectra from 550 to 900 nm and partial transmission spectra centered at 660 nm. The spectra were analyzed by the method of partial least squares. One sensor consists of a miniature integrating sphere, while the other was fiber-guided. The results show that the geometry of the sensors and different blood flows do not influence the spectral analysis significantly. Independent of the sensor geometry, both hematocrit and oxygen saturation could be determined with an absolute predicted root mean square error of less than 3%. Furthermore, the analysis showed that hematocrit prediction requires eight wavelength regions and oxygen saturation prediction requires four wavelength regions using reflectance spectroscopy. This implies that if the measurement is restricted to reflectance, a spectrometer is indispensable for determining both blood parameters. Hematocrit determination could be improved using reflectance measurements in combination with transmission.
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Affiliation(s)
- Martina Meinke
- Charité-Universitätsmedizin Berlin, Campus Benjamin Franklin, CC6, Institut für Medizinische Physik und Lasermedizin, Berlin, Germany.
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30
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Friebel M, Roggan A, Müller G, Meinke M. Determination of optical properties of human blood in the spectral range 250 to 1100 nm using Monte Carlo simulations with hematocrit-dependent effective scattering phase functions. JOURNAL OF BIOMEDICAL OPTICS 2006; 11:34021. [PMID: 16822070 DOI: 10.1117/1.2203659] [Citation(s) in RCA: 137] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
The absorption coefficient mu(a), scattering coefficient mu(s), and anisotropy factor g of diluted and undiluted human blood (hematocrit 0.84 and 42.1%) are determined under flow conditions in the wavelength range 250 to 1100 nm, covering the absorption bands of hemoglobin. These values are obtained by high precision integrating sphere measurements in combination with an optimized inverse Monte Carlo simulation (IMCS). With a new algorithm, appropriate effective phase functions could be evaluated for both blood concentrations using the IMCS. The best results are obtained using the Reynolds-McCormick phase function with the variation factor alpha = 1.2 for hematocrit 0.84%, and alpha = 1.7 for hematocrit 42.1%. The obtained data are compared with the parameters given by the Mie theory. The use of IMCS in combination with selected appropriate effective phase functions make it possible to take into account the nonspherical shape of erythrocytes, the phenomenon of coupled absorption and scattering, and multiple scattering and interference phenomena. It is therefore possible for the first time to obtain reasonable results for the optical behavior of human blood, even at high hematocrit and in high hemoglobin absorption areas. Moreover, the limitations of the Mie theory describing the optical properties of blood can be shown.
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31
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Sardar DK, Yow RM, Tsin ATC, Sardar R. Optical scattering, absorption, and polarization of healthy and neovascularized human retinal tissues. JOURNAL OF BIOMEDICAL OPTICS 2005; 10:051501. [PMID: 16292945 DOI: 10.1117/1.2065867] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The optical scattering, absorption, and polarization properties of human retinal tissues are investigated for a number of laser wavelengths in the visible range. The indices of refraction of these tissues are determined by applying Brewster's law. The inverse adding doubling method based on the diffusion approximation and radiative transport theory is applied to the measured values of total diffuse transmission, total diffuse reflection, and index of refraction to determine the optical absorption, scattering, and scattering anisotropy coefficients of the intact retinal tissues from healthy and diseased (neovascularized) human eyes. The polarization studies show that the retinal tissues possess significant intrinsic polarization characteristics, that are more pronounced in diseased tissues than in healthy tissues.
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Affiliation(s)
- Dhiraj K Sardar
- University of Texas at San Antonio, Department of Physics and Astronomy, San Antonio, Texas 78249-0697, USA.
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32
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Patwardhan SV, Dhawan AP, Relue PA. Monte Carlo Simulation of Light-Tissue Interaction: Three-Dimensional Simulation for Trans-Illumination-Based Imaging of Skin Lesions. IEEE Trans Biomed Eng 2005; 52:1227-36. [PMID: 16041986 DOI: 10.1109/tbme.2005.847546] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Three-dimensional, voxel-based, and wavelength-dependent skin lesion models are developed and simulated using Monte Carlo techniques. The optical geometry of the Nevoscope with trans-illumination is used in the simulations for characterizing the lesion thickness. Based on the correlation analysis between the lesion thickness and the diffuse reflectance, optical wavelengths are selected for multispectral imaging of skin lesions using the Nevoscope. Tissue optical properties reported by various researchers are compiled together to form a voxel library. Tissue models used in the simulations are developed using the voxel library which offers flexibility in updating the optical properties and adding new media types into the models independent of the Monte Carlo simulation code.
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Affiliation(s)
- Sachin V Patwardhan
- Department of Electrical and Computer Engineering, New Jersey Institute of Technology, Newark, NJ 07102, USA
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33
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Faber DJ, Aalders MCG, Mik EG, Hooper BA, van Gemert MJC, van Leeuwen TG. Oxygen saturation-dependent absorption and scattering of blood. PHYSICAL REVIEW LETTERS 2004; 93:028102. [PMID: 15323954 DOI: 10.1103/physrevlett.93.028102] [Citation(s) in RCA: 136] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2003] [Indexed: 05/18/2023]
Abstract
We report on the scattering properties of oxygenated and deoxygenated whole blood from 250 to 1000 nm. We determine the complex refractive index of oxygenated and deoxygenated hemoglobin using a Kramers-Kronig analysis and optical coherence tomography measurements. Combining these data with Mie theory, the scattering properties are calculated. The strong oxygen saturation dependent scattering effects should be taken into account in the data analysis of optical oxymetry.
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Affiliation(s)
- Dirk J Faber
- Laser Center, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands
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34
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Sardar DK, Salinas FS, Perez JJ, Tsin ATC. Optical characterization of bovine retinal tissues. JOURNAL OF BIOMEDICAL OPTICS 2004; 9:624-631. [PMID: 15189102 DOI: 10.1117/1.1688813] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
An in-depth characterization of the optical properties of bovine retinal and retinal pigment epithelium-choroidal tissues has been performed. The indices of refraction of these ocular tissues were determined by applying Brewster's law. The inverse adding doubling method based on the diffusion approximation and radiative transport theory is applied to the measured values of the total diffuse transmission, total diffuse reflection, and collimated transmission to calculate the optical absorption, scattering, and scattering anisotropy coefficients of the bovine retinal and retinal pigment epithelium-choroidal tissues. The values of the optical properties obtained from the inverse adding doubling method are compared with those generated by the Monte Carlo simulation technique. Optical polarization measurements are also performed on bovine retinal tissues. Our studies show that both retina and retinal pigment epithelium-choroid possess strong polarization characteristics.
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Affiliation(s)
- Dhiraj K Sardar
- Department of Physics and Astronomy, The University of Texas at San Antonio, San Antonio, TX 78249-0697, USA.
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35
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González-Mora JL, Martín FA, Rojas-Díaz D, Hernández S, Ramos-Pérez I, Rodríguez VD, Castellano MA. In vivo spectroscopy: a novel approach for simultaneously estimating nitric oxide and hemodynamic parameters in the rat brain. J Neurosci Methods 2002; 119:151-61. [PMID: 12323419 DOI: 10.1016/s0165-0270(02)00175-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Nitric oxide (NO) is a versatile molecule involved in a wide range of biological processes. Under physiological conditions, NO reacts with oxyhemoglobin (OxyHb) to form methemoglobin (MetHb) at a very high rate. Microdialysis studies have used hemoglobin solutions as a trapping method to quantify NO in vivo. The methodology described here uses the microcapillary network with endogenous OxyHb instead of microdialysis probe with exogenous OxyHb for monitoring MetHb as an indirect index of NO levels by in vivo spectroscopy using optical fibers. This new method has been validated in rat cerebral cortex by the infusion of NO or well-known drug-induced changes in NO concentration (NMDA agonists and a NO-synthase inhibitor) and by comparing results with simultaneous voltammetric recordings. Results indicate that this spectroscopy technique is able to record large increases in MetHb levels and to detect reductions of its basal levels. In addition, data show that similar changes and kinetics can be observed with both techniques. Thus, intravascular MetHb can be used as an indirect index of NO levels. It is proposed that in vivo spectroscopy may be a useful tool to gain insight into the roles of NO in hemodynamic parameters and in other physiological processes such as the regulation of the mitochondrial respiratory chain.
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Affiliation(s)
- Jose L González-Mora
- Departamento de Fisiología, Facultad de Medicina, Universidad de La Laguna, Tenerife 38071, Canary Islands, Spain.
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36
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Hammer M, Thamm E, Schweitzer D. A simple algorithm for in vivo ocular fundus oximetry compensating for non-haemoglobin absorption and scattering. Phys Med Biol 2002; 47:N233-8. [PMID: 12361226 DOI: 10.1088/0031-9155/47/17/403] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
An algorithm is introduced for the compensation of the influence of non-haemoglobin absorption as well as tissue scattering on blood spectra used in optical oximetry at the ocular fundus. The in vivo measured spectra were corrected by a linear transformation in order to match the reference spectra of fully oxygenated and reduced blood, respectively, at three isosbestic points (522 nm, 569 nm and 586 nm). The oxygen saturation can then be determined at a wavelength showing a high contrast between oxygenated and reduced haemoglobin (e.g., 560 nm). Reflection measurements at blood flowing through cuvettes were used to validate the algorithm. The oxygen saturation values were compared to measurements of the same samples at a laboratory haemoximeter. The mean deviation was found to be 2.65%.
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Affiliation(s)
- Martin Hammer
- Department of Ophthalmology, Friedrich Schiller University, Jena, Germany.
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37
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Nair MS, Ghosh N, Raju NS, Pradhan A. Determination of optical parameters of human breast tissue from spatially resolved fluorescence: a diffusion theory model. APPLIED OPTICS 2002; 41:4024-4035. [PMID: 12099614 DOI: 10.1364/ao.41.004024] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We report the measurement of optical transport parameters of pathologically characterized malignant tissues, normal tissues, and different types of benign tumors of the human breast in the visible wavelength region. A spatially resolved steady-state diffuse fluorescence reflectance technique was used to estimate the values for the reduced-scattering coefficient (mu(s)') and the absorption coefficient (mu(a)) of human breast tissues at three wavelengths (530, 550, and 590 nm). Different breast tissues could be well differentiated from one another, and different benign tumors could also be distinguished by their measured transport parameters. A diffusion theory model was developed to describe fluorescence light energy distribution, especially its spatial variation in a turbid and multiply scattering medium such as human tissue. The validity of the model was checked with a Monte Carlo simulation and also with different tissue phantoms prepared with polystyrene microspheres as scatterers, riboflavin as fluorophores, and methylene blue as absorbers.
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Affiliation(s)
- Maya S Nair
- Department of Physics, Indian Institute of Technology, Kanpur, India
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38
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Neudel F, Takatani S, Reul H, Rau G. Effect of hemolysis on oxygen and hematocrit measurements by near infrared reflectance spectroscopy. Med Eng Phys 2002; 24:301-7. [PMID: 11996849 DOI: 10.1016/s1350-4533(02)00012-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
A short review of the principles of near infrared reflectance spectroscopy (NIRS) in whole blood is followed by a discussion on the influence of hemolysis. The increase of free plasmahemoglobin (PHb) has a strong influence on the continuous measurement of hematocrit and oxygen saturation (O(2)S) by NIRS. In view of the relative stability of hematocrit values in vivo this effect may be used to detect a change of the hemolysis rate induced by blood pumps in case of malfunction. The aim of this study is, therefore, the assessment of the hemolysis rate within an in vitro mock loop comprising a rotary blood pump by means of NIRS at constant hematocrit levels compared to the photometric reference method. Reflected light is measured by an integrated optical sensor working at three wavelengths (660 nm, 730 nm, and 830 nm). The experimental results demonstrate that the increase of free hemoglobin in plasma due to mechanical pumping leads to a decrease of detected reflected light at all three wavelengths. Influencing parameters such as adhering proteins on the sensor surface and the blood flow rate are briefly discussed. Finally, the possibility of using NIRS sensors for detecting malfunctions of blood pumps in vitro and in vivo is discussed, together with the option of using these sensors for supervision of long-term implantable pumps.
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Affiliation(s)
- F Neudel
- Helmholtz-Institute for Biomedical Engineering, Department of Cardiovascular Engineering, Pauwelsstr. 20, 52074 Aachen, Germany.
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39
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Sardar DK, Mayo ML, Glickman RD. Optical characterization of melanin. JOURNAL OF BIOMEDICAL OPTICS 2001; 6:404-11. [PMID: 11728198 DOI: 10.1117/1.1411978] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2000] [Revised: 02/20/2001] [Accepted: 03/19/2001] [Indexed: 05/21/2023]
Abstract
The optical properties of melanin have been characterized for a number of laser wavelengths in the visible region. The index of refraction of melanin is measured by the conventional method of minimum deviation using a hollow quartz prism at these wavelengths. The inverse adding doubling method based on the diffusion approximation and radiative transport theory have been employed to determine the absorption, scattering, and scattering anisotropy coefficients of melanin from the measurements of diffuse transmission, diffuse reflection and collimated transmission using double integrating spheres. The results obtained by the use of inverse adding doubling method have been compared to the Monte Carlo simulation technique.
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Affiliation(s)
- D K Sardar
- The University of Texas at San Antonio, Department of Physics and Astronomy, San Antonio, TX 78249, USA.
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40
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Hammer M, Yaroslavsky AN, Schweitzer D. A scattering phase function for blood with physiological haematocrit. Phys Med Biol 2001; 46:N65-9. [PMID: 11277234 DOI: 10.1088/0031-9155/46/3/402] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Though the optics of red blood cells as well as whole blood has been studied extensively, an effective scattering phase function for whole blood is still needed. The interference of waves scattered by neighbouring cells cannot be neglected in highly concentrated suspensions such as whole blood. As a result, the phase function valid for single erythrocytes may fail to describe a single scattering process in whole blood with physiological haematocrit (Hct approximately 0.4). In this study we compared the results obtained in goniophotometric measurements of blood samples with the results of angle-resolved Monte Carlo simulations. The results show that a Henyey-Greenstein phase function with an anisotropy factor of 0.972 is an adequate approximation for the effective scattering phase function of whole blood with high haematocrit at a wavelength of 514 nm.
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Affiliation(s)
- M Hammer
- University of Jena, Department of Ophthalmology, Germany.
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41
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Fridolin I, Hansson K, Lindberg LG. Optical non-invasive technique for vessel imaging: II. A simplified photon diffusion analysis. Phys Med Biol 2000; 45:3779-92. [PMID: 11131199 DOI: 10.1088/0031-9155/45/12/319] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
The purpose of this paper is to explain theoretically the origin of previously presented experimental results by an optical non-invasive method using NIR for imaging blood vessels based on a specific combination of several physical parameters. The theoretical model is based on the diffusion approximation derived from the transport theory deep in a bulk tissue. An analytical solution was obtained describing photon behaviour under certain conditions during vessel identification. The modelled results indicate that the vessel identification facility depends upon source-detector separation and vessel depth, and does not depend essentially on the radiant power from the light source. The solution offers a relatively simple theoretical explanation of the experimental results and can be applied to several other clinical applications using similar technical solutions.
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Affiliation(s)
- I Fridolin
- Department of Biomedical Engineering, Linköping University, University Hospital, Sweden.
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Bevilacqua F, Berger AJ, Cerussi AE, Jakubowski D, Tromberg BJ. Broadband absorption spectroscopy in turbid media by combined frequency-domain and steady-state methods. APPLIED OPTICS 2000; 39:6498-507. [PMID: 18354663 DOI: 10.1364/ao.39.006498] [Citation(s) in RCA: 165] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
A technique for measuring broadband near-infrared absorption spectra of turbid media that uses a combination of frequency-domain (FD) and steady-state (SS) reflectance methods is presented. Most of the wavelength coverage is provided by a white-light SS measurement, whereas the FD data are acquired at a few selected wavelengths. Coefficients of absorption (mu(a)) and reduced scattering (mu(s)') derived from the FD data are used to calibrate the intensity of the SS measurements and to estimate mu(s)' at all wavelengths in the spectral window of interest. After these steps are performed, one can determine mu(a) by comparing the SS reflectance values with the predictions of diffusion theory, wavelength by wavelength. Absorption spectra of a turbid phantom and of human breast tissue in vivo, derived with the combined SSFD technique, agree well with expected reference values. All measurements can be performed at a single source-detector separation distance, reducing the variations in sampling volume that exist in multidistance methods. The technique uses relatively inexpensive light sources and detectors and is easily implemented on an existing multiwavelength FD system.
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Affiliation(s)
- F Bevilacqua
- Beckman Laser Institute, University of California, Irvine, Irvine, California 92612, USA
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43
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Mazeron P, Didelon J, Muller S, Stoltz JF. A theoretical approach of the measurement of osmotic fragility of erythrocytes by optical transmission. Photochem Photobiol 2000; 72:172-8. [PMID: 10946569 DOI: 10.1562/0031-8655(2000)072<0172:ataotm>2.0.co;2] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The osmotic fragility of the erythrocyte membrane to hypotonic solutions is investigated theoretically. The fragility curves exhibit a strong transmittance rise. This variation is assumed to result from changes in the scattering properties of erythrocytes under dialysis resulting from swelling and hemolysis. The refractive indices of erythrocytes are obtained through the Lorentz-Lorenz relation based on hemoglobin and water contents. The scattering cross sections (needed to calculate the collimated transmittance) and the forward scattered intensity (needed to calculate the incoherent transmittance) are expressed according to the simple algebraic relations of the anomalous diffraction approximation. It is shown that swelling (or shrinking) has no influence on the collimated transmittance. Hemolysis alone causes the abrupt sigmoidal increase of the collimated transmittance with time. The possible transmittance increase (decrease) observed during swelling (shrinking) is due to incoherent transmittance and depends on the detecting solid angle value of the experimental setup.
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Affiliation(s)
- P Mazeron
- Laboratoire de Physico-chimie des Colloïdes, UMR CNRS (SRSMC), Faculté des Sciences, Université Henri Poincaré Vandoeuvre lès Nancy, France.
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Bays R, Wagnières G, Robert D, Braichotte D, Savary JF, Monnier P, van den Bergh H. Light dosimetry for photodynamic therapy in the esophagus. Lasers Surg Med 2000; 20:290-303. [PMID: 9138258 DOI: 10.1002/(sici)1096-9101(1997)20:3<290::aid-lsm8>3.0.co;2-l] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
BACKGROUND AND OBJECTIVE Photodynamic therapy (PDT) is an efficient technique to treat superficial early cancers in the pharynx, esophagus, and tracheo-bronchial tree. However, the lack of selectivity of some of the clinically used photosensitizers can result in significant damage to the healthy tissue during the treatment. In the esophagus, this may lead to medical complications such as stenosis and fistula. Insufficient selectivity may be compensated to some extent by accurate light dosimetry. Here, we present an approach to safer and more efficient PDT by improved light dosimetry in the esophagus. STUDY DESIGN/MATERIALS AND METHODS This includes the utilization of a suitable light distributor, the estimation of the radiant energy density in the tissue, and the knowledge of the esophagus morphology. The light distributor presently used in the clinic is described and several techniques to study light propagation in the esophageal wall have been investigated and are discussed. Thickness of different histological layers of the esophageal wall have been measured ex vivo and are presented. RESULTS Under these conditions and based on a simple model of the light distribution in the tissue, some basic and clinically useful notions of light dosimetry can be drawn. These notions, associated with measured value of tissue optical properties at the wavelengths of interest with the presently used photosensitizers, are discussed regarding the particular morphology of the esophageal wall. In particular, the importance of the illumination wavelength from the safety point of view is shown. CONCLUSION The proposed approach allows for improved safety and efficacy of PDT in the esophagus, particularly in the clinical tests of new photosensitizers.
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Affiliation(s)
- R Bays
- Institute of Environmental Engineering, Swiss Federal Institute of Technology, Lausanne, Switzerland
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Roggan A, Friebel M, Do Rschel K, Hahn A, Mu Ller G. Optical Properties of Circulating Human Blood in the Wavelength Range 400-2500 nm. JOURNAL OF BIOMEDICAL OPTICS 1999; 4:36-46. [PMID: 23015168 DOI: 10.1117/1.429919] [Citation(s) in RCA: 376] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Knowledge about the optical properties μa,μs, and g of human blood plays an important role for many diagnostic and therapeutic applications in laser medicine and medical diagnostics. They strongly depend on physiological parameters such as oxygen saturation, osmolarity, flow conditions, haematocrit, etc. The integrating sphere technique and inverse Monte Carlo simulations were applied to measure μa,μs, and g of circulating human blood. At 633 nm the optical properties of human blood with a haematocrit of 10% and an oxygen saturation of 98% were found to be 0.210±0.002 mm-1 for μa,77.3±0.5 mm-1 for μs, and 0.994±0.001 for the g factor. An increase of the haematocrit up to 50% lead to a linear increase of absorption and reduced scattering. Variations in osmolarity and wall shear rate led to changes of all three parameters while variations in the oxygen saturation only led to a significant change of the absorption coefficient. A spectrum of all three parameters was measured in the wavelength range 400-2500 nm for oxygenated and deoxygenated blood, showing that blood absorption followed the absorption behavior of haemoglobin and water. The scattering coefficient decreased for wavelengths above 500 nm with approximately λ-1.7; the g factor was higher than 0.9 over the whole wavelength range. © 1999 Society of Photo-Optical Instrumentation Engineers.
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Yaroslavsky AN, Yaroslavsky IV, Goldbach T, Schwarzmaier HJ. Influence of the scattering phase function approximation on the optical properties of blood determined from the integrating sphere measurements. JOURNAL OF BIOMEDICAL OPTICS 1999; 4:47-53. [PMID: 23015169 DOI: 10.1117/1.429920] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
We investigated the impact of the scattering phase function approximation on the optical properties of whole human blood determined from integrating sphere measurements using an inverse Monte Carlo technique. The diffuse reflectance Rd and the total transmittance Tt(λ=633 nm) of whole blood samples (Hct=38%) were measured with double-integrating sphere equipment. The scattering phase functions of highly diluted blood samples (Hct=0.1%) were measured using a goniophotometer. We approximated the experimentally determined scattering phase functions with either Henyey-Greenstein (HGPF), Gegenbauer kernel (GKPF), or Mie (MPF) phase functions to preset the anisotropy factor μ¯ for the inverse problem. We have employed HGPF, GKPF, and MPF approximations in the inverse Monte Carlo procedure to derive the absorption coefficient μa and the scattering coefficient μs. To evaluate the obtained data, we calculated the angular distributions of scattered light for optically thick samples and compared the results with goniophotometric measurements. The data presented in this study demonstrate that the employed approximation of the scattering phase function can have a substantial impact on the derived values of μs and μ¯, while μa and the reduced scattering coefficient μs' are much less sensitive to the exact form of the scattering phase function. © 1999 Society of Photo-Optical Instrumentation Engineers.
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Hammer M, Schweitzer D, Michel B, Thamm E, Kolb A. Single scattering by red blood cells. APPLIED OPTICS 1998; 37:7410-8. [PMID: 18301575 DOI: 10.1364/ao.37.007410] [Citation(s) in RCA: 72] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A highly diluted suspension of red blood cells (hematocrit 0.01) was illuminated with an Ar or a dye laser in the wavelength range of 458-660 nm. The extinction and the angle-resolved intensity of scattered light were measured and compared with the predictions of Mie theory, the Rayleigh-Gans approximation, and the anomalous diffraction approximation. Furthermore, empirical phase functions were fitted to the measurements. The measurements were in satisfactory agreement with the predictions of Mie theory. However, better agreement was found with the anomalous diffraction model. In the Rayleigh-Gans approximation, only small-angle scattering is described appropriately. The scattering phase function of erythrocytes may be represented by the Gegenbauer kernel phase function.
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Nilsson AM, Alsholm P, Karlsson A, Andersson-Engels S. T-matrix computations of light scattering by red blood cells. APPLIED OPTICS 1998; 37:2735-48. [PMID: 18273219 DOI: 10.1364/ao.37.002735] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The electromagnetic far field, as well as the near field, originating from light interaction with a red blood cell (RBC)volume-equivalent spheroid, was analyzed by utilizing theT-matrix theory. This method is a powerful tool thatmakes it possible to study the influence of cell shape on the angulardistribution of scattered light. General observations were that thethree-dimensional shape, as well as the optical thickness apparent tothe incident field, affects the forward scattering. Thebackscattering was influenced by the shape of the surface facing theincident beam. Furthermore sphering as well as elongation of anoblate RBC into a volume-equivalent sphere or a prolate spheroid, respectively, was theoretically modeled to imitate physiologicalphenomena caused, e.g., by heat or the increased shear stress offlowing blood. Both sphering and elongation were shown to decreasethe intensity of the forward-directed scattering, thus yielding lowerg factors. The sphering made the scattering patternindependent of azimuthal scattering angle phi(s), whereas the elongation induced more apparent phi(s)-dependent patterns. The lightscattering by a RBC volume-equivalent spheroid was thus found to behighly influenced by the shape of the scattering object. Anear-field radius r(nf) was evaluated as thedistance to which the maximum intensity of the total near field haddecreased to 2.5 times that of the incident field. It was estimatedto 2-24.5 times the maximum radius of the scattering spheroid, corresponding to 12-69 mum. Because the near-field radiuswas shown to be larger than a simple estimation of the distance betweenthe RBC's in whole blood, the assumption of independent scattering, frequently employed in optical measurements on whole blood, seemsinappropriate. This also indicates that one cannot extrapolate theresults obtained from diluted blood to whole blood by multiplying witha simple concentration factor.
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Kim J, Lin JC. Successive order scattering transport approximation for laser light propagation in whole blood medium. IEEE Trans Biomed Eng 1998; 45:505-10. [PMID: 9556967 DOI: 10.1109/10.664206] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
An analytical solution method of the radiative transport equation, describing light scattering distribution in whole blood, is derived by applying successive order scattering approximation and transport approximation. By separating coherent components of scattered fluxes, the transport equation can be represented in terms of each order scattering flux, and the equations for each order scattering flux have a simplified integration term of scattering contribution that usually makes the solution complicated or even impossible. Also, actual phase function can be used for calculation of angular dependent scattering distribution that is approximated by the sum of the zeroth- and first-order Legendre polynomial in diffusion theory, or the sum of isotropic and coherent components in transport approximation. The method is then used to calculate reflectance from a half-space blood medium. It is found that first-order scattering flux alone produces a good agreement with experimental data and higher-order scattering fluxes are negligible in whole blood.
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Affiliation(s)
- J Kim
- University of Illinois, Chicago 60616, USA.
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50
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Nichols MG, Hull EL, Foster TH. Design and testing of a white-light, steady-state diffuse reflectance spectrometer for determination of optical properties of highly scattering systems. APPLIED OPTICS 1997; 36:93-104. [PMID: 18250650 DOI: 10.1364/ao.36.000093] [Citation(s) in RCA: 81] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
We present a steady-state radially resolved diffuse reflectance spectrometer capable of measuring the absorption and transport scattering spectra of tissue-simulating phantoms over an adjustable 170-nm wavelength interval in the visible and near infrared. Measurements in a variety of phantoms are demonstrated over the relevant range of tissue optical properties, and the accuracy of the instrument is found to be approximately 10% in both scattering and absorption. Monte Carlo simulations designed to test the accuracy of the instrument are presented that support the experimental findings.
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