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For: Schwalger T, Deger M, Gerstner W. Towards a theory of cortical columns: From spiking neurons to interacting neural populations of finite size. PLoS Comput Biol 2017;13:e1005507. [PMID: 28422957 DOI: 10.1371/journal.pcbi.1005507] [Citation(s) in RCA: 68] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2016] [Revised: 05/03/2017] [Accepted: 04/07/2017] [Indexed: 11/22/2022]  Open
Number Cited by Other Article(s)
1
Koren V, Malerba SB, Schwalger T, Panzeri S. Structure, dynamics, coding and optimal biophysical parameters of efficient excitatory-inhibitory spiking networks. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.24.590955. [PMID: 38712237 PMCID: PMC11071478 DOI: 10.1101/2024.04.24.590955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
2
Becker MP, Idiart MAP. Mean-field method for generic conductance-based integrate-and-fire neurons with finite timescales. Phys Rev E 2024;109:024406. [PMID: 38491595 DOI: 10.1103/physreve.109.024406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Accepted: 11/08/2023] [Indexed: 03/18/2024]
3
Friedenberger Z, Naud R. Dendritic excitability controls overdispersion. NATURE COMPUTATIONAL SCIENCE 2024;4:19-28. [PMID: 38177495 DOI: 10.1038/s43588-023-00580-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 11/29/2023] [Indexed: 01/06/2024]
4
Skaar JEW, Haug N, Stasik AJ, Einevoll GT, Tøndel K. Metamodelling of a two-population spiking neural network. PLoS Comput Biol 2023;19:e1011625. [PMID: 38032904 PMCID: PMC10688753 DOI: 10.1371/journal.pcbi.1011625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 10/23/2023] [Indexed: 12/02/2023]  Open
5
Lorenzi RM, Geminiani A, Zerlaut Y, De Grazia M, Destexhe A, Gandini Wheeler-Kingshott CAM, Palesi F, Casellato C, D'Angelo E. A multi-layer mean-field model of the cerebellum embedding microstructure and population-specific dynamics. PLoS Comput Biol 2023;19:e1011434. [PMID: 37656758 PMCID: PMC10501640 DOI: 10.1371/journal.pcbi.1011434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 09/14/2023] [Accepted: 08/15/2023] [Indexed: 09/03/2023]  Open
6
Huang CH, Lin CCK. New biophysical rate-based modeling of long-term plasticity in mean-field neuronal population models. Comput Biol Med 2023;163:107213. [PMID: 37413849 DOI: 10.1016/j.compbiomed.2023.107213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 05/20/2023] [Accepted: 06/25/2023] [Indexed: 07/08/2023]
7
Ekelmans P, Kraynyukovas N, Tchumatchenko T. Targeting operational regimes of interest in recurrent neural networks. PLoS Comput Biol 2023;19:e1011097. [PMID: 37186668 DOI: 10.1371/journal.pcbi.1011097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Revised: 05/25/2023] [Accepted: 04/11/2023] [Indexed: 05/17/2023]  Open
8
Vinci GV, Benzi R, Mattia M. Self-Consistent Stochastic Dynamics for Finite-Size Networks of Spiking Neurons. PHYSICAL REVIEW LETTERS 2023;130:097402. [PMID: 36930929 DOI: 10.1103/physrevlett.130.097402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 12/23/2022] [Accepted: 02/09/2023] [Indexed: 06/18/2023]
9
Gast R, Solla SA, Kennedy A. Macroscopic dynamics of neural networks with heterogeneous spiking thresholds. Phys Rev E 2023;107:024306. [PMID: 36932598 DOI: 10.1103/physreve.107.024306] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 02/02/2023] [Indexed: 06/18/2023]
10
Pietras B, Schmutz V, Schwalger T. Mesoscopic description of hippocampal replay and metastability in spiking neural networks with short-term plasticity. PLoS Comput Biol 2022;18:e1010809. [PMID: 36548392 PMCID: PMC9822116 DOI: 10.1371/journal.pcbi.1010809] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Revised: 01/06/2023] [Accepted: 12/11/2022] [Indexed: 12/24/2022]  Open
11
Klinshov VV, Kirillov SY. Shot noise in next-generation neural mass models for finite-size networks. Phys Rev E 2022;106:L062302. [PMID: 36671128 DOI: 10.1103/physreve.106.l062302] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Accepted: 12/12/2022] [Indexed: 06/17/2023]
12
Hagen E, Magnusson SH, Ness TV, Halnes G, Babu PN, Linssen C, Morrison A, Einevoll GT. Brain signal predictions from multi-scale networks using a linearized framework. PLoS Comput Biol 2022;18:e1010353. [PMID: 35960767 PMCID: PMC9401172 DOI: 10.1371/journal.pcbi.1010353] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Revised: 08/24/2022] [Accepted: 07/02/2022] [Indexed: 12/04/2022]  Open
13
Dumont G, Pérez-Cervera A, Gutkin B. A framework for macroscopic phase-resetting curves for generalised spiking neural networks. PLoS Comput Biol 2022;18:e1010363. [PMID: 35913991 PMCID: PMC9371324 DOI: 10.1371/journal.pcbi.1010363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 08/11/2022] [Accepted: 07/06/2022] [Indexed: 11/18/2022]  Open
14
Osborne H, de Kamps M. A numerical population density technique for N-dimensional neuron models. Front Neuroinform 2022;16:883796. [PMID: 35935536 PMCID: PMC9354936 DOI: 10.3389/fninf.2022.883796] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 06/24/2022] [Indexed: 11/13/2022]  Open
15
Layer M, Senk J, Essink S, van Meegen A, Bos H, Helias M. NNMT: Mean-Field Based Analysis Tools for Neuronal Network Models. Front Neuroinform 2022;16:835657. [PMID: 35712677 PMCID: PMC9196133 DOI: 10.3389/fninf.2022.835657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Accepted: 03/17/2022] [Indexed: 11/13/2022]  Open
16
Shi YL, Steinmetz NA, Moore T, Boahen K, Engel TA. Cortical state dynamics and selective attention define the spatial pattern of correlated variability in neocortex. Nat Commun 2022;13:44. [PMID: 35013259 PMCID: PMC8748999 DOI: 10.1038/s41467-021-27724-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Accepted: 12/03/2021] [Indexed: 01/20/2023]  Open
17
Ito T, Konishi K, Sano T, Wakayama H, Ogawa M. Synchronization of relaxation oscillators with adaptive thresholds and application to automated guided vehicles. Phys Rev E 2022;105:014201. [PMID: 35193180 DOI: 10.1103/physreve.105.014201] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 12/02/2021] [Indexed: 11/07/2022]
18
Gast R, Knösche TR, Schmidt H. Mean-field approximations of networks of spiking neurons with short-term synaptic plasticity. Phys Rev E 2021;104:044310. [PMID: 34781468 DOI: 10.1103/physreve.104.044310] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 09/30/2021] [Indexed: 01/17/2023]
19
A Biomorphic Model of Cortical Column for Content-Based Image Retrieval. ENTROPY 2021;23:e23111458. [PMID: 34828156 PMCID: PMC8620877 DOI: 10.3390/e23111458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 10/22/2021] [Accepted: 10/28/2021] [Indexed: 11/18/2022]
20
Schwalger T. Mapping input noise to escape noise in integrate-and-fire neurons: a level-crossing approach. BIOLOGICAL CYBERNETICS 2021;115:539-562. [PMID: 34668051 PMCID: PMC8551127 DOI: 10.1007/s00422-021-00899-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/17/2021] [Accepted: 09/27/2021] [Indexed: 06/13/2023]
21
Chizhov AV, Graham LJ. A strategy for mapping biophysical to abstract neuronal network models applied to primary visual cortex. PLoS Comput Biol 2021;17:e1009007. [PMID: 34398895 PMCID: PMC8389851 DOI: 10.1371/journal.pcbi.1009007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 08/26/2021] [Accepted: 07/27/2021] [Indexed: 11/18/2022]  Open
22
Biological constraints on neural network models of cognitive function. Nat Rev Neurosci 2021;22:488-502. [PMID: 34183826 PMCID: PMC7612527 DOI: 10.1038/s41583-021-00473-5] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/17/2021] [Indexed: 02/06/2023]
23
Goldobin DS, di Volo M, Torcini A. Reduction Methodology for Fluctuation Driven Population Dynamics. PHYSICAL REVIEW LETTERS 2021;127:038301. [PMID: 34328756 DOI: 10.1103/physrevlett.127.038301] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 03/24/2021] [Accepted: 06/14/2021] [Indexed: 06/13/2023]
24
Pietras B, Gallice N, Schwalger T. Low-dimensional firing-rate dynamics for populations of renewal-type spiking neurons. Phys Rev E 2021;102:022407. [PMID: 32942450 DOI: 10.1103/physreve.102.022407] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Accepted: 06/29/2020] [Indexed: 11/07/2022]
25
Huang CH, Lin CCK. A novel density-based neural mass model for simulating neuronal network dynamics with conductance-based synapses and membrane current adaptation. Neural Netw 2021;143:183-197. [PMID: 34157643 DOI: 10.1016/j.neunet.2021.06.009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 04/01/2021] [Accepted: 06/06/2021] [Indexed: 10/21/2022]
26
Romaro C, Najman FA, Lytton WW, Roque AC, Dura-Bernal S. NetPyNE Implementation and Scaling of the Potjans-Diesmann Cortical Microcircuit Model. Neural Comput 2021;33:1993-2032. [PMID: 34411272 PMCID: PMC8382011 DOI: 10.1162/neco_a_01400] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Accepted: 02/16/2021] [Indexed: 11/04/2022]
27
Klinshov V, Kirillov S, Nekorkin V. Reduction of the collective dynamics of neural populations with realistic forms of heterogeneity. Phys Rev E 2021;103:L040302. [PMID: 34005994 DOI: 10.1103/physreve.103.l040302] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 03/16/2021] [Indexed: 11/07/2022]
28
Causal cognitive architecture 1: Integration of connectionist elements into a navigation-based framework. COGN SYST RES 2021. [DOI: 10.1016/j.cogsys.2020.10.021] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
29
Liang J, Zhou T, Zhou C. Hopf Bifurcation in Mean Field Explains Critical Avalanches in Excitation-Inhibition Balanced Neuronal Networks: A Mechanism for Multiscale Variability. Front Syst Neurosci 2020;14:580011. [PMID: 33324179 PMCID: PMC7725680 DOI: 10.3389/fnsys.2020.580011] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2020] [Accepted: 11/02/2020] [Indexed: 12/14/2022]  Open
30
Genkin M, Engel TA. Moving beyond generalization to accurate interpretation of flexible models. NAT MACH INTELL 2020;2:674-683. [DOI: 10.1038/s42256-020-00242-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
31
Kulkarni A, Ranft J, Hakim V. Synchronization, Stochasticity, and Phase Waves in Neuronal Networks With Spatially-Structured Connectivity. Front Comput Neurosci 2020;14:569644. [PMID: 33192427 PMCID: PMC7604323 DOI: 10.3389/fncom.2020.569644] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Accepted: 08/18/2020] [Indexed: 01/15/2023]  Open
32
Generation of Sharp Wave-Ripple Events by Disinhibition. J Neurosci 2020;40:7811-7836. [PMID: 32913107 PMCID: PMC7548694 DOI: 10.1523/jneurosci.2174-19.2020] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Revised: 06/29/2020] [Accepted: 07/17/2020] [Indexed: 11/21/2022]  Open
33
Staiger JF, Petersen CCH. Neuronal Circuits in Barrel Cortex for Whisker Sensory Perception. Physiol Rev 2020;101:353-415. [PMID: 32816652 DOI: 10.1152/physrev.00019.2019] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
34
René A, Longtin A, Macke JH. Inference of a Mesoscopic Population Model from Population Spike Trains. Neural Comput 2020;32:1448-1498. [DOI: 10.1162/neco_a_01292] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
35
Spike-induced ordering: Stochastic neural spikes provide immediate adaptability to the sensorimotor system. Proc Natl Acad Sci U S A 2020;117:12486-12496. [PMID: 32430332 PMCID: PMC7275765 DOI: 10.1073/pnas.1819707117] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
36
Todorov D, Truccolo W. Stability of stochastic finite-size spiking-neuron networks: Comparing mean-field, 1-loop correction and quasi-renewal approximations. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020;2019:4380-4386. [PMID: 31946838 DOI: 10.1109/embc.2019.8857101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
37
Biophysically grounded mean-field models of neural populations under electrical stimulation. PLoS Comput Biol 2020;16:e1007822. [PMID: 32324734 PMCID: PMC7200022 DOI: 10.1371/journal.pcbi.1007822] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 05/05/2020] [Accepted: 03/24/2020] [Indexed: 11/19/2022]  Open
38
Schmutz V, Gerstner W, Schwalger T. Mesoscopic population equations for spiking neural networks with synaptic short-term plasticity. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2020;10:5. [PMID: 32253526 PMCID: PMC7136387 DOI: 10.1186/s13408-020-00082-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Accepted: 03/25/2020] [Indexed: 06/07/2023]
39
Carlu M, Chehab O, Dalla Porta L, Depannemaecker D, Héricé C, Jedynak M, Köksal Ersöz E, Muratore P, Souihel S, Capone C, Zerlaut Y, Destexhe A, di Volo M. A mean-field approach to the dynamics of networks of complex neurons, from nonlinear Integrate-and-Fire to Hodgkin-Huxley models. J Neurophysiol 2020;123:1042-1051. [PMID: 31851573 PMCID: PMC7099478 DOI: 10.1152/jn.00399.2019] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Revised: 12/05/2019] [Accepted: 12/09/2019] [Indexed: 11/22/2022]  Open
40
Schmidt H, Avitabile D. Bumps and oscillons in networks of spiking neurons. CHAOS (WOODBURY, N.Y.) 2020;30:033133. [PMID: 32237760 DOI: 10.1063/1.5135579] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Accepted: 03/03/2020] [Indexed: 06/11/2023]
41
Schneider H. The meaningful-based cognitive architecture model of schizophrenia. COGN SYST RES 2020. [DOI: 10.1016/j.cogsys.2019.09.019] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
42
Koren V, Andrei AR, Hu M, Dragoi V, Obermayer K. Reading-out task variables as a low-dimensional reconstruction of neural spike trains in single trials. PLoS One 2019;14:e0222649. [PMID: 31622346 PMCID: PMC6797168 DOI: 10.1371/journal.pone.0222649] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2019] [Accepted: 09/03/2019] [Indexed: 11/18/2022]  Open
43
Schwalger T, Chizhov AV. Mind the last spike - firing rate models for mesoscopic populations of spiking neurons. Curr Opin Neurobiol 2019;58:155-166. [PMID: 31590003 DOI: 10.1016/j.conb.2019.08.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Accepted: 08/25/2019] [Indexed: 02/07/2023]
44
Gleeson P, Cantarelli M, Marin B, Quintana A, Earnshaw M, Sadeh S, Piasini E, Birgiolas J, Cannon RC, Cayco-Gajic NA, Crook S, Davison AP, Dura-Bernal S, Ecker A, Hines ML, Idili G, Lanore F, Larson SD, Lytton WW, Majumdar A, McDougal RA, Sivagnanam S, Solinas S, Stanislovas R, van Albada SJ, van Geit W, Silver RA. Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits. Neuron 2019;103:395-411.e5. [PMID: 31201122 PMCID: PMC6693896 DOI: 10.1016/j.neuron.2019.05.019] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2018] [Revised: 03/04/2019] [Accepted: 05/09/2019] [Indexed: 02/07/2023]
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Lagzi F, Atay FM, Rotter S. Bifurcation analysis of the dynamics of interacting subnetworks of a spiking network. Sci Rep 2019;9:11397. [PMID: 31388027 PMCID: PMC6684592 DOI: 10.1038/s41598-019-47190-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Accepted: 07/10/2019] [Indexed: 12/04/2022]  Open
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Conductance-Based Refractory Density Approach for a Population of Bursting Neurons. Bull Math Biol 2019;81:4124-4143. [PMID: 31313084 DOI: 10.1007/s11538-019-00643-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Accepted: 07/09/2019] [Indexed: 12/29/2022]
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Roe AW. Columnar connectome: toward a mathematics of brain function. Netw Neurosci 2019;3:779-791. [PMID: 31410379 PMCID: PMC6663318 DOI: 10.1162/netn_a_00088] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2018] [Accepted: 04/14/2019] [Indexed: 01/09/2023]  Open
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Kuehn C, Tölle JM. A gradient flow formulation for the stochastic Amari neural field model. J Math Biol 2019;79:1227-1252. [PMID: 31214776 DOI: 10.1007/s00285-019-01393-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2018] [Revised: 11/26/2018] [Indexed: 11/27/2022]
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Levenstein D, Buzsáki G, Rinzel J. NREM sleep in the rodent neocortex and hippocampus reflects excitable dynamics. Nat Commun 2019;10:2478. [PMID: 31171779 PMCID: PMC6554409 DOI: 10.1038/s41467-019-10327-5] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Accepted: 04/24/2019] [Indexed: 01/10/2023]  Open
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Muscinelli SP, Gerstner W, Schwalger T. How single neuron properties shape chaotic dynamics and signal transmission in random neural networks. PLoS Comput Biol 2019;15:e1007122. [PMID: 31181063 PMCID: PMC6586367 DOI: 10.1371/journal.pcbi.1007122] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Revised: 06/20/2019] [Accepted: 05/22/2019] [Indexed: 02/07/2023]  Open
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