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Gomard Y, Hafsia S, Lebon C, Rabarison P, Idaroussi AB, Yssouf A, Boussès P, Mavingui P, Atyame C. Genetic diversity of endosymbiotic bacteria Wolbachia infecting two mosquito species of the genus Eretmapodites occurring in sympatry in the Comoros archipelago. Front Microbiol 2024; 15:1343917. [PMID: 38601925 PMCID: PMC11004463 DOI: 10.3389/fmicb.2024.1343917] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Accepted: 03/11/2024] [Indexed: 04/12/2024] Open
Abstract
Introduction The influence of Wolbachia on mosquito reproduction and vector competence has led to renewed interest in studying the genetic diversity of these bacteria and the phenotypes they induced in mosquito vectors. In this study, we focused on two species of Eretmapodites, namely Eretmapodites quinquevittatus and Eretmapodites subsimplicipes, from three islands in the Comoros archipelago (in the Southwestern Indian Ocean). Methods Using the COI gene, we examined the mitochondrial genetic diversity of 879 Eretmapodites individuals from 54 sites. Additionally, we investigated the presence and genetic diversity of Wolbachia using the wsp marker and the diversity of five housekeeping genes commonly used for genotyping through Multiple Locus Sequence Typing (MLST). Results and discussion Overall, Er. quinquevittatus was the most abundant species in the three surveyed islands and both mosquito species occurred in sympatry in most of the investigated sites. We detected a higher mitochondrial genetic diversity in Er. quinquevittatus with 35 reported haplotypes (N = 615 specimens, Hd = 0.481 and π = 0.002) while 13 haplotypes were found in Er. subsimplicipes (N = 205 specimens, Hd = 0.338 and π = 0.001), this difference is likely due to the bias in sampling size between the two species. We report for the first time the presence of Wolbachia in these two Eretmapodites species. The prevalence of Wolbachia infection varied significantly between species, with a low prevalence recorded in Er. quinquevittatus (0.8%, N = 5/627) while infection was close to fixation in Er. subsimplicipes (87.7%, N = 221/252). Both male and female individuals of the two mosquito species appeared to be infected. The analysis of MLST genes revealed the presence of two Wolbachia strains corresponding to two new strain types (STs) within the supergroups A and B, which have been named wEretA and wEretB. These strains were found as mono-infections and are closely related, phylogenetically, to Wolbachia strains previously reported in Drosophila species. Finally, we demonstrate that maternal transmission of Wolbachia is imperfect in Er. subsimplicipes, which could explain the presence of a minority of uninfected individuals in the field.
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Affiliation(s)
- Yann Gomard
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical) CNRS 9192, INSERM 1187, IRD 249, Saint-Denis, île de La Réunion, France
| | - Sarah Hafsia
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical) CNRS 9192, INSERM 1187, IRD 249, Saint-Denis, île de La Réunion, France
| | - Cyrille Lebon
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical) CNRS 9192, INSERM 1187, IRD 249, Saint-Denis, île de La Réunion, France
| | | | | | - Amina Yssouf
- National Malaria Control Program, Moroni, Comoros
| | - Philippe Boussès
- UMR MIVEGEC (Maladies Infectieuses et Vecteurs: Écologie, Génétique, Évolution et Contrôle), IRD, CNRS, Université de Montpellier, Montpellier, France
| | - Patrick Mavingui
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical) CNRS 9192, INSERM 1187, IRD 249, Saint-Denis, île de La Réunion, France
| | - Célestine Atyame
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical) CNRS 9192, INSERM 1187, IRD 249, Saint-Denis, île de La Réunion, France
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Kormos A, Dimopoulos G, Bier E, Lanzaro GC, Marshall JM, James AA. Conceptual risk assessment of mosquito population modification gene-drive systems to control malaria transmission: preliminary hazards list workshops. Front Bioeng Biotechnol 2023; 11:1261123. [PMID: 37965050 PMCID: PMC10641379 DOI: 10.3389/fbioe.2023.1261123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Accepted: 10/09/2023] [Indexed: 11/16/2023] Open
Abstract
The field-testing and eventual adoption of genetically-engineered mosquitoes (GEMs) to control vector-borne pathogen transmission will require them meeting safety criteria specified by regulatory authorities in regions where the technology is being considered for use and other locales that might be impacted. Preliminary risk considerations by researchers and developers may be useful for planning the baseline data collection and field research used to address the anticipated safety concerns. Part of this process is to identify potential hazards (defined as the inherent ability of an entity to cause harm) and their harms, and then chart the pathways to harm and evaluate their probability as part of a risk assessment. The University of California Malaria Initiative (UCMI) participated in a series of workshops held to identify potential hazards specific to mosquito population modification strains carrying gene-drive systems coupled to anti-parasite effector genes and their use in a hypothetical island field trial. The hazards identified were placed within the broader context of previous efforts discussed in the scientific literature. Five risk areas were considered i) pathogens, infections and diseases, and the impacts of GEMs on human and animal health, ii) invasiveness and persistence of GEMs, and interactions of GEMs with target organisms, iii) interactions of GEMs with non-target organisms including horizontal gene transfer, iv) impacts of techniques used for the management of GEMs and v) evolutionary and stability considerations. A preliminary hazards list (PHL) was developed and is made available here. This PHL is useful for internal project risk evaluation and is available to regulators at prospective field sites. UCMI project scientists affirm that the subsequent processes associated with the comprehensive risk assessment for the application of this technology should be driven by the stakeholders at the proposed field site and areas that could be affected by this intervention strategy.
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Affiliation(s)
- Ana Kormos
- Vector Genetics Laboratory, University of California, Davis, Davis, CA, United States
| | - George Dimopoulos
- W. Harry Feinstone Department of Molecular Microbiology and Immunology, Bloomberg School of Public Health, Malaria Research Institute, Johns Hopkins University, Baltimore, MD, United States
| | - Ethan Bier
- Department of Cell and Developmental Biology, University of California, San Diego, San Diego, CA, United States
| | - Gregory C. Lanzaro
- Vector Genetics Laboratory, University of California, Davis, Davis, CA, United States
| | - John M. Marshall
- Divisions of Epidemiology and Biostatistics, School of Public Health, University of California, Berkeley, Berkeley, CA, United States
| | - Anthony A. James
- Departments of Microbiology and Molecular Genetics and Molecular Biology and Biochemistry, University of California, Irvine, Irvine, CA, United States
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Ebogo‐Belobo JT, Kenmoe S, Abanda NN, Bowo‐Ngandji A, Mbaga DS, Magoudjou‐Pekam JN, Kame‐Ngasse GI, Tchatchouang S, Menkem EZ, Okobalemba EA, Noura EA, Meta‐Djomsi D, Maïdadi‐Foudi M, Kenfack‐Zanguim J, Kenfack‐Momo R, Kengne‐Nde C, Esemu SN, Mbacham WF, Sadeuh‐Mba SA, Ndip L, Njouom R. Contemporary epidemiological data of Rift Valley fever virus in humans, mosquitoes and other animal species in Africa: A systematic review and meta-analysis. Vet Med Sci 2023; 9:2309-2328. [PMID: 37548116 PMCID: PMC10508527 DOI: 10.1002/vms3.1238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 03/29/2023] [Accepted: 07/21/2023] [Indexed: 08/08/2023] Open
Abstract
Rift Valley fever (RVF) is a severe zoonotic mosquito-borne disease that represents an important threat to human and animal health, with major public health and socioeconomic impacts. This disease is endemic throughout many African countries and the Arabian Peninsula. This systematic review with meta-analysis was conducted to determine the RVF prevalence in humans, mosquitoes and other animal species in Africa. The review also provides contemporary data on RVF case fatality rate (CFR) in humans. In this systematic review with meta-analysis, a comprehensive literature search was conducted on the PubMed, Embase, Web of Science and Global Index Medicus databases from January 2000 to June 2022 to identify relevant studies. Pooled CFR and prevalence estimates were calculated using the random-effects model. Subgroup analysis and sensitivity analysis were performed, and the I2 -statistic was used to investigate a potential source of heterogeneity. A total of 205 articles were included in the final analysis. The overall RVF CFR in humans was found to be 27.5% [95% CI = 8.0-52.5]. The overall pooled prevalence was 7.8% [95% CI = 6.2-9.6] in humans and 9.3% [95% CI = 8.1-10.6] in animals, respectively. The RVF prevalence in individual mosquitoes ranged from 0.0% to 25%. Subgroup analysis showed substantial heterogeneity with respect to geographical regions and human categories. The study shows that there is a correspondingly similar prevalence of RVF in human and animals; however, human CFR is much higher than the observed prevalence. The lack of a surveillance programme and the fact that this virus has subclinical circulation in animals and humans could explain these observations. The implementation of a One Health approach for RVF surveillance and control would be of great interest for human and animal health.
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Affiliation(s)
- Jean Thierry Ebogo‐Belobo
- Centre for Research on Health and Priority PathologiesInstitute of Medical Research and Medicinal Plants StudiesYaoundeCameroon
- Department of BiochemistryFaculty of SciencesThe University of Yaounde IYaoundéCameroon
| | - Sebastien Kenmoe
- Department of Microbiology and ParasitologyUniversity of BueaBueaCameroon
| | - Ngu Njei Abanda
- Virology DepartmentCentre Pasteur of CameroonYaoundéCameroon
| | - Arnol Bowo‐Ngandji
- Department of MicrobiologyFaculty of SciencesThe University of Yaounde IYaoundéCameroon
| | - Donatien Serge Mbaga
- Department of MicrobiologyFaculty of SciencesThe University of Yaounde IYaoundéCameroon
| | | | - Ginette Irma Kame‐Ngasse
- Centre for Research on Health and Priority PathologiesInstitute of Medical Research and Medicinal Plants StudiesYaoundeCameroon
| | | | | | | | - Efietngab Atembeh Noura
- Centre for Research on Health and Priority PathologiesInstitute of Medical Research and Medicinal Plants StudiesYaoundeCameroon
| | - Dowbiss Meta‐Djomsi
- Research Centre on Emerging and Re‐Emerging DiseasesInstitute of Medical Research and Medicinal Plants StudiesYaoundeCameroon
| | - Martin Maïdadi‐Foudi
- Research Centre on Emerging and Re‐Emerging DiseasesInstitute of Medical Research and Medicinal Plants StudiesYaoundeCameroon
| | | | - Raoul Kenfack‐Momo
- Department of BiochemistryFaculty of SciencesThe University of Yaounde IYaoundéCameroon
| | - Cyprien Kengne‐Nde
- Epidemiological Surveillance, Evaluation and Research UnitNational AIDS Control CommitteeYaoundéCameroon
| | | | - Wilfred Fon Mbacham
- Department of BiochemistryFaculty of SciencesThe University of Yaounde IYaoundéCameroon
| | - Serge Alain Sadeuh‐Mba
- Virology DepartmentCentre Pasteur of CameroonYaoundéCameroon
- Maryland Department of AgricultureSalisbury Animal Health LaboratorySalisburyMarylandUSA
| | - Lucy Ndip
- Department of Microbiology and ParasitologyUniversity of BueaBueaCameroon
| | - Richard Njouom
- Virology DepartmentCentre Pasteur of CameroonYaoundéCameroon
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4
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Islam K, Carlsson M, Enquist PA, Qian W, Marttila M, Strand M, Ahlm C, Evander M. Structural Modifications and Biological Evaluations of Rift Valley Fever Virus Inhibitors Identified from Chemical Library Screening. ACS OMEGA 2022; 7:6854-6868. [PMID: 35252679 PMCID: PMC8892858 DOI: 10.1021/acsomega.1c06513] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 02/04/2022] [Indexed: 06/14/2023]
Abstract
The Rift Valley fever virus (RVFV) is an emerging high-priority pathogen endemic in Africa with pandemic potential. There is no specific treatment or approved antiviral drugs for the RVFV. We previously developed a cell-based high-throughput assay to screen small molecules targeting the RVFV and identified a potential effective antiviral compound (1-N-(2-(biphenyl-4-yloxy)ethyl)propane-1,3-diamine) as a lead compound. Here, we investigated how structural modifications of the lead compound affected the biological properties and the antiviral effect against the RVFV. We found that the length of the 2-(3-aminopropylamino)ethyl chain of the compound was important for the compound to retain its antiviral activity. The antiviral activity was similar when the 2-(3-aminopropylamino)ethyl chain was replaced with a butyl piperazine chain. However, we could improve the cytotoxicity profile of the lead compound by changing the phenyl piperazine linker from the para-position (compound 9a) to the meta-position (compound 13a). Results from time-of-addition studies suggested that compound 13a might be active during virus post-entry and/or the replication phase of the virus life cycle and seemed to affect the K+ channel. The modifications improved the properties of our lead compound, and our data suggest that 13a is a promising candidate to evaluate further as a therapeutic agent for RVFV infection.
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Affiliation(s)
- Koushikul Islam
- Department
of Clinical Microbiology, Umeå University, Umeå 901 85, Sweden
| | - Marcus Carlsson
- Department
of Chemistry, Umeå University, Umeå 901 87, Sweden
| | | | - Weixing Qian
- Department
of Chemistry, Umeå University, Umeå 901 87, Sweden
| | - Marko Marttila
- Department
of Clinical Microbiology, Umeå University, Umeå 901 85, Sweden
| | - Mårten Strand
- Department
of Clinical Microbiology, Umeå University, Umeå 901 85, Sweden
| | - Clas Ahlm
- Department
of Clinical Microbiology, Umeå University, Umeå 901 85, Sweden
| | - Magnus Evander
- Department
of Clinical Microbiology, Umeå University, Umeå 901 85, Sweden
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5
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Tennant WSD, Cardinale E, Cêtre-Sossah C, Moutroifi Y, Le Godais G, Colombi D, Spencer SEF, Tildesley MJ, Keeling MJ, Charafouddine O, Colizza V, Edmunds WJ, Métras R. Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape. Nat Commun 2021; 12:5593. [PMID: 34552082 PMCID: PMC8458460 DOI: 10.1038/s41467-021-25833-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Accepted: 09/02/2021] [Indexed: 02/08/2023] Open
Abstract
The persistence mechanisms of Rift Valley fever (RVF), a zoonotic arboviral haemorrhagic fever, at both local and broader geographical scales have yet to be fully understood and rigorously quantified. We developed a mathematical metapopulation model describing RVF virus transmission in livestock across the four islands of the Comoros archipelago, accounting for island-specific environments and inter-island animal movements. By fitting our model in a Bayesian framework to 2004-2015 surveillance data, we estimated the importance of environmental drivers and animal movements on disease persistence, and tested the impact of different control scenarios on reducing disease burden throughout the archipelago. Here we report that (i) the archipelago network was able to sustain viral transmission in the absence of explicit disease introduction events after early 2007, (ii) repeated outbreaks during 2004-2020 may have gone under-detected by local surveillance, and (iii) co-ordinated within-island control measures are more effective than between-island animal movement restrictions.
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Affiliation(s)
- Warren S D Tennant
- The Zeeman Institute: SBIDER, University of Warwick, Coventry, CV4 7AL, UK.
- Mathematics Institute, University of Warwick, Coventry, CV4 7AL, UK.
| | - Eric Cardinale
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement, UMR Animal, Santé, Territoires, Risques, et Écosystèmes, F-97490, Sainte Clotilde, La Réunion, France
- Animal, Santé, Territoires, Risques, et Écosystèmes, Université de Montpellier, Centre de Coopération Internationale en Recherche Agronomique pour le Développement, INRAE, Montpellier, France
| | - Catherine Cêtre-Sossah
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement, UMR Animal, Santé, Territoires, Risques, et Écosystèmes, F-97490, Sainte Clotilde, La Réunion, France
- Animal, Santé, Territoires, Risques, et Écosystèmes, Université de Montpellier, Centre de Coopération Internationale en Recherche Agronomique pour le Développement, INRAE, Montpellier, France
| | - Youssouf Moutroifi
- Vice-Présidence en charge de l'Agriculture, l'Elevage, la Pêche, l'Industrie, l'Energie et l'Artisanat, B.P. 41 Mdé, Moroni, Union of the Comoros
| | - Gilles Le Godais
- Direction de l'Alimentation, de l'Agriculture et de la Forêt de Mayotte, Service de l'Alimentation, 97600, Mamoudzou, France
| | - Davide Colombi
- Aizoon Technology Consulting, Str. del Lionetto 6, Torino, Italy
| | - Simon E F Spencer
- The Zeeman Institute: SBIDER, University of Warwick, Coventry, CV4 7AL, UK
- Department of Statistics, University of Warwick, Coventry, CV4, 7AL, UK
| | - Mike J Tildesley
- The Zeeman Institute: SBIDER, University of Warwick, Coventry, CV4 7AL, UK
- Mathematics Institute, University of Warwick, Coventry, CV4 7AL, UK
- School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK
| | - Matt J Keeling
- The Zeeman Institute: SBIDER, University of Warwick, Coventry, CV4 7AL, UK
- Mathematics Institute, University of Warwick, Coventry, CV4 7AL, UK
- School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK
| | - Onzade Charafouddine
- Vice-Présidence en charge de l'Agriculture, l'Elevage, la Pêche, l'Industrie, l'Energie et l'Artisanat, B.P. 41 Mdé, Moroni, Union of the Comoros
| | - Vittoria Colizza
- INSERM, Sorbonne Université, Institut Pierre Louis d'Épidémiologie et de Santé Publique (Unité Mixte de Recherche en Santé 1136), 75012, Paris, France
| | - W John Edmunds
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK
| | - Raphaëlle Métras
- INSERM, Sorbonne Université, Institut Pierre Louis d'Épidémiologie et de Santé Publique (Unité Mixte de Recherche en Santé 1136), 75012, Paris, France
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK
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Pedarrieu A, El Mellouli F, Khallouki H, Zro K, Sebbar G, Sghaier S, Madani H, Bouayed N, Lo MM, Diop M, Ould El Mamy AB, Barry Y, Dakouo M, Traore A, Gagara H, Souley MM, Acha S, Mapaco L, Chang’a J, Nyakilinga D, Lubisi BA, Tshabalala T, Filippone C, Heraud JM, Chamassy SB, Achiraffi A, Keck N, Grard G, Mohammed KAA, Alrizqi AM, Cetre-Sossah C. External quality assessment of Rift Valley fever diagnosis in countries at risk of the disease: African, Indian Ocean and Middle-East regions. PLoS One 2021; 16:e0251263. [PMID: 34010292 PMCID: PMC8133482 DOI: 10.1371/journal.pone.0251263] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 04/23/2021] [Indexed: 12/14/2022] Open
Abstract
Rift Valley fever virus (RVFV), an arbovirus belonging to the Phlebovirus genus of the Phenuiviridae family, causes the zoonotic and mosquito-borne RVF. The virus, which primarily affects livestock (ruminants and camels) and humans, is at the origin of recent major outbreaks across the African continent (Mauritania, Libya, Sudan), and in the South-Western Indian Ocean (SWIO) islands (Mayotte). In order to be better prepared for upcoming outbreaks, to predict its introduction in RVFV unscathed countries, and to run efficient surveillance programmes, the priority is harmonising and improving the diagnostic capacity of endemic countries and/or countries considered to be at risk of RVF. A serological inter-laboratory proficiency test (PT) was implemented to assess the capacity of veterinary laboratories to detect antibodies against RVFV. A total of 18 laboratories in 13 countries in the Middle East, North Africa, South Africa, and the Indian Ocean participated in the initiative. Two commercial kits and two in-house serological assays for the detection of RVFV specific IgG antibodies were tested. Sixteen of the 18 participating laboratories (88.9%) used commercial kits, the analytical performance of test sensitivity and specificity based on the seroneutralisation test considered as the reference was 100%. The results obtained by the laboratories which used the in-house assay were correct in only one of the two criteria (either sensitivity or specificity). In conclusion, most of the laboratories performed well in detecting RVFV specific IgG antibodies and can therefore be considered to be prepared. Three laboratories in three countries need to improve their detection capacities. Our study demonstrates the importance of conducting regular proficiency tests to evaluate the level of preparedness of countries and of building a network of competent laboratories in terms of laboratory diagnosis to better face future emerging diseases in emergency conditions.
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Affiliation(s)
- Aurélie Pedarrieu
- ASTRE, Univ Montpellier, CIRAD, INRA, Montpellier, France
- CIRAD, UMR ASTRE, F-34398 Montpellier Cedex, France
| | - Fatiha El Mellouli
- Laboratoire Régional d’Analyses et de Recherches de Casablanca, Office National de la Sécurité Sanitaire des aliments), Nouaceur, Casablanca, Morocco
| | - Hanane Khallouki
- Laboratoire Régional d’Analyses et de Recherches de Casablanca, Office National de la Sécurité Sanitaire des aliments), Nouaceur, Casablanca, Morocco
| | | | | | - Soufien Sghaier
- Département de Virologie, Institut de la Recherche Vétérinaire de Tunisie (IRVT), Université de Tunis El Manar, Tunis, Tunisia
| | - Hafsa Madani
- Laboratoire Central Vétérinaire d’Alger, Institut National de Médecine Vétérinaire (INMV), Mohammadia, Algeria
| | - Nadera Bouayed
- Laboratoire Central Vétérinaire d’Alger, Institut National de Médecine Vétérinaire (INMV), Mohammadia, Algeria
| | - Modou Moustapha Lo
- Institut Sénégalais de Recherches Agricoles, Laboratoire National de l’Elevage et de Recherches Vétérinaires (ISRA-LNERV), Dakar, Senegal
| | - Mariame Diop
- Institut Sénégalais de Recherches Agricoles, Laboratoire National de l’Elevage et de Recherches Vétérinaires (ISRA-LNERV), Dakar, Senegal
| | | | - Yahya Barry
- Office National de Recherches et de Développement de l’Elevage (ONARDEL), Nouakchott, Mauritania
| | | | | | - Haladou Gagara
- Laboratoire Central de l’Elevage (LABOCEL), Niamey, Niger
| | | | - Sara Acha
- Agrarian Research Institute of Mozambique, Directorate of Aninal Science, Central Veterinary Laboratory, Maputo, Mozambique
| | - Laurenco Mapaco
- Agrarian Research Institute of Mozambique, Directorate of Aninal Science, Central Veterinary Laboratory, Maputo, Mozambique
| | - Jelly Chang’a
- Centre for Infectious Diseases and Biotechnology, Tanzania Veterinary Laboratory Agency, Dar es Salaam, Tanzania
| | - Denis Nyakilinga
- Centre for Infectious Diseases and Biotechnology, Tanzania Veterinary Laboratory Agency, Dar es Salaam, Tanzania
| | - Baratang A. Lubisi
- Agricultural Research Council-Onderstepoort Veterinary Research (ARC-OVR), Onderstepoort, South Africa
| | - Thabisile Tshabalala
- Agricultural Research Council-Onderstepoort Veterinary Research (ARC-OVR), Onderstepoort, South Africa
| | - Claudia Filippone
- Institut Pasteur de Madagascar, Unité de Virologie, Antananarivo, Madagascar
| | - Jean Michel Heraud
- Institut Pasteur de Madagascar, Unité de Virologie, Antananarivo, Madagascar
| | | | - Abdou Achiraffi
- Laboratoire vétérinaire et d’analyses départemental (LVAD976), Mayotte, France
| | - Nicolas Keck
- Laboratoire Départemental Vétérinaire (LDV34), Montpellier, France
| | - Gilda Grard
- Centre National de Référence sur les arboviruses (CNR Arbovirus), Institut de Recherche Biomédicale des Armées (IRBA), Marseille, France
- Unité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), Marseille, France
| | | | - Abdulwahed Mohammed Alrizqi
- The Ministry of Environment, Water and Agriculture (MEWA), Jazan Veterinary Diagnostic Laboratory, Jizan, Kingdom of Saudi Arabia
| | - Catherine Cetre-Sossah
- ASTRE, Univ Montpellier, CIRAD, INRA, Montpellier, France
- CIRAD, UMR ASTRE, F-97490 Sainte-Clotilde, La Réunion, France
- * E-mail:
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7
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Licciardi S, Loire E, Cardinale E, Gislard M, Dubois E, Cêtre-Sossah C. In vitro shared transcriptomic responses of Aedes aegypti to arboviral infections: example of dengue and Rift Valley fever viruses. Parasit Vectors 2020; 13:395. [PMID: 32758286 PMCID: PMC7404916 DOI: 10.1186/s13071-020-04253-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Accepted: 07/21/2020] [Indexed: 12/13/2022] Open
Abstract
Background Arthropod borne virus infections are the cause of severe emerging diseases. Among the diseases due to arboviruses, dengue (DEN) and Rift Valley fever (RVF) are in the top ten in the list of diseases responsible of severe human cases worldwide. Understanding the effects of viral infection on gene expression in competent vectors is a challenge for the development of early diagnostic tools and may enable researchers and policy makers to better anticipate outbreaks in the next future. Methods In this study, alterations in gene expression across the entire Aedes aegypti genome during infection with DENV and RVFV were investigated in vitro at two time points of infection, the early phase (24 h) and the late phase (6 days) of infection using the RNA sequencing approach Results A total of 10 upregulated genes that share a similar expression profile during infection with both viruses at early and late phases of infection were identified. Family B and D clip-domain serine proteases (CLIP) were clearly overrepresented as well as C-type lectins and transferrin. Conclusions Our data highlight the presence of 10 viral genes upregulated in Ae. aegypti during infection. They may also be targeted in the case of the development of broad-spectrum anti-viral diagnostic tools focusing the mosquito vectors rather than the mammalian hosts as they may predict the emergence of outbreaks.![]()
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Affiliation(s)
- Séverine Licciardi
- CIRAD, UMR ASTRE, 97490, Sainte Clotilde, La Réunion, France.,ASTRE, University of Montpellier, CIRAD, INRAe, Montpellier, France
| | - Etienne Loire
- ASTRE, University of Montpellier, CIRAD, INRAe, Montpellier, France.,CIRAD, UMR ASTRE, 34395, Montpellier, France
| | - Eric Cardinale
- CIRAD, UMR ASTRE, 97490, Sainte Clotilde, La Réunion, France.,ASTRE, University of Montpellier, CIRAD, INRAe, Montpellier, France
| | - Marie Gislard
- MGX-Montpellier Genomix, IGF, INSERM, CNRS, University of Montpellier, Montpellier, France
| | - Emeric Dubois
- MGX-Montpellier Genomix, IGF, INSERM, CNRS, University of Montpellier, Montpellier, France
| | - Catherine Cêtre-Sossah
- CIRAD, UMR ASTRE, 97490, Sainte Clotilde, La Réunion, France. .,ASTRE, University of Montpellier, CIRAD, INRAe, Montpellier, France.
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8
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Rissmann M, Stoek F, Pickin MJ, Groschup MH. Mechanisms of inter-epidemic maintenance of Rift Valley fever phlebovirus. Antiviral Res 2019; 174:104692. [PMID: 31870761 DOI: 10.1016/j.antiviral.2019.104692] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2019] [Revised: 09/26/2019] [Accepted: 12/11/2019] [Indexed: 12/31/2022]
Abstract
Rift Valley fever phlebovirus (RVFV) is an arthropod-borne virus that has caused substantial epidemics throughout Africa and in the Arabian Peninsula. The virus can cause severe disease in livestock and humans and therefore the control and prevention of viral outbreaks is of utmost importance. The epidemiology of RVFV has some particular characteristics. Unexpected and significant epidemics have been observed in spatially and temporally divergent patterns across the African continent. Sudden epidemics in previously unaffected areas are followed by periods of long-term apparent absence of virus and sudden, unpredictable reoccurrence in disparate regions. Therefore, the elucidation of underlying mechanisms of viral maintenance is one of the largest gaps in the knowledge of RVFV ecology. It remains unknown whether the virus needs to be reintroduced before RVF outbreaks can occur, or if unperceived viral circulation in local vertebrates or mosquitoes is sufficient for maintenance of the virus. To gain insight into these knowledge gaps, we here review existing data that describe potential mechanisms of RVFV maintenance, as well as molecular and serological studies in endemic and non-endemic areas that provide evidence of an inter- or pre-epidemic virus presence. Basic and country-specific mechanisms of RVFV introduction into non-endemic countries are summarized and an overview of studies using mathematical modeling of RVFV persistence is given.
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Affiliation(s)
- Melanie Rissmann
- Friedrich-Loeffler-Institut, Institute of Novel and Emerging Infectious Diseases, Suedufer 10, 17489, Greifswald-Insel Riems, Germany
| | - Franziska Stoek
- Friedrich-Loeffler-Institut, Institute of Novel and Emerging Infectious Diseases, Suedufer 10, 17489, Greifswald-Insel Riems, Germany
| | - Matthew J Pickin
- Friedrich-Loeffler-Institut, Institute of Novel and Emerging Infectious Diseases, Suedufer 10, 17489, Greifswald-Insel Riems, Germany
| | - Martin H Groschup
- Friedrich-Loeffler-Institut, Institute of Novel and Emerging Infectious Diseases, Suedufer 10, 17489, Greifswald-Insel Riems, Germany.
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9
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Ruget AS, Tran A, Waret-Szkuta A, Moutroifi YO, Charafouddine O, Cardinale E, Cêtre-Sossah C, Chevalier V. Spatial Multicriteria Evaluation for Mapping the Risk of Occurrence of Peste des Petits Ruminants in Eastern Africa and the Union of the Comoros. Front Vet Sci 2019; 6:455. [PMID: 31921913 PMCID: PMC6922030 DOI: 10.3389/fvets.2019.00455] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Accepted: 11/27/2019] [Indexed: 12/04/2022] Open
Abstract
Peste des petits ruminants virus (PPRV), responsible for peste des petits ruminants (PPR), is widely circulating in Africa and Asia. The disease is a huge burden for the economy and development of the affected countries. In Eastern Africa, the disease is considered endemic. Because of the geographic proximity and existing trade between eastern African countries and the Comoros archipelago, the latter is at risk of introduction and spread, and the first PPR outbreaks occurred in the Union of the Comoros in 2012. The objective of this study was to map the areas suitable for PPR occurrence and spread in the Union of the Comoros and four eastern African countries, namely Ethiopia, Uganda, Kenya, and Tanzania. A Geographic Information System (GIS)-based Multicriteria Evaluation (MCE) was developed. Risk factors for PPR occurrence and spread, and their relative importance, were identified using literature review and expert-based knowledge. Corresponding geographic data were collected, standardized, and combined based on a weighted linear combination to obtain PPR suitability maps. The accuracy of the maps was assessed using outbreak data from the EMPRES database and a ROC curve analysis. Our model showed an excellent ability to distinguish between absence and presence of outbreaks in Eastern Africa (AUC = 0.907; 95% CI [0.820-0.994]), and a very good performance in the Union of the Comoros (AUC = 0.889, 95% CI: [0.694-1]). These results highlight the efficiency of the GIS-MCE method, which can be applied at different geographic scales: continental, national and local. The resulting maps provide decision support tools for implementation of disease surveillance and control measures, thus contributing to the PPR eradication goal of OIE and FAO by 2030.
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Affiliation(s)
- Anne-Sophie Ruget
- UMR ASTRE, CIRAD, Ste-Clotilde, France
- ASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France
| | - Annelise Tran
- UMR ASTRE, CIRAD, Ste-Clotilde, France
- ASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France
- UMR TETIS, CIRAD, Ste-Clotilde, France
- TETIS, Univ Montpellier, AgroParisTech, CIRAD, CNRS, INRAE, Montpellier, France
| | | | | | - Onzade Charafouddine
- Ministry of Agriculture, Fisheries, Environment, Territorial Development, and Urbanism, Moroni, Comoros
| | - Eric Cardinale
- UMR ASTRE, CIRAD, Ste-Clotilde, France
- ASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France
| | - Catherine Cêtre-Sossah
- UMR ASTRE, CIRAD, Ste-Clotilde, France
- ASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France
| | - Véronique Chevalier
- UMR ASTRE, CIRAD, Ste-Clotilde, France
- ASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France
- Epidemiology and Public Health Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia
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10
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Cêtre-Sossah C, Pédarrieu A, Juremalm M, Jansen Van Vuren P, Brun A, Ould EL Mamy AB, Héraud JM, Filippone C, Ravalohery JP, Chaabihi H, Albina E, Dommergues L, Paweska J, Cardinale E. Development and validation of a pen side test for Rift Valley fever. PLoS Negl Trop Dis 2019; 13:e0007700. [PMID: 31509527 PMCID: PMC6738586 DOI: 10.1371/journal.pntd.0007700] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Accepted: 07/23/2019] [Indexed: 01/25/2023] Open
Abstract
Background Rift Valley fever (RVF) is one of the main vector borne zoonotic diseases that affects a wide range of ruminants and human beings in Africa and the Arabian Peninsula. A rapid and specific test for RVF diagnosis at the site of a suspected outbreak is crucial for the implementation of control measures. Methodology/Principal findings A first-line lateral flow immunochromatographic strip test (LFT) was developed for the detection of the nucleoprotein (N) of the RVF virus (RVFV). Its diagnostic performance characteristics were evaluated using reference stocks isolates recovered from different hosts and in geographic regions mimicking clinical specimens and from known RVF negative serum samples. A high level of diagnostic accuracy (DSe (35/35), DSp (167/169)) was observed, including the absence of cross-reactivity with viruses belonging to different genera. Conclusion/Significance The fact no specialized reagents and laboratory equipment are needed, make this assay a valuable, first-line diagnostic tool in resource-poor diagnostic territories for on-site RVFV detection, however the staff require training. Rift Valley fever (RVF) is a viral disease that affects a wide range of animals and human beings in Africa and the Arabian Peninsula involving low case fatality rates. A rapid and specific test for RVF diagnosis at the site of a suspected outbreak is crucial for the implementation of control measures. Here, we report the development and the evaluation of the diagnostic performance characteristics of a pen-side test found to be a highly accurate and valuable first-line diagnostic tool for on-site RVF detection.
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Affiliation(s)
- Catherine Cêtre-Sossah
- ASTRE, Univ Montpellier, CIRAD, INRA, Montpellier, France
- CIRAD, UMR ASTRE, Sainte‐Clotilde, La Réunion, France
- * E-mail:
| | | | | | - Petrus Jansen Van Vuren
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, Sandringham-Johannesburg, South Africa
| | | | | | | | - Claudia Filippone
- Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar
| | | | | | - Emmanuel Albina
- ASTRE, Univ Montpellier, CIRAD, INRA, Montpellier, France
- CIRAD, UMR ASTRE, Petit Bourg, Guadeloupe, France
| | | | - Janusz Paweska
- Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, Sandringham-Johannesburg, South Africa
| | - Eric Cardinale
- ASTRE, Univ Montpellier, CIRAD, INRA, Montpellier, France
- CIRAD, UMR ASTRE, Sainte‐Clotilde, La Réunion, France
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11
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Garros C, Labuschagne K, Dommergues L, Ben M, Balenghien T, Muñoz F, Bakhoum MT, Cardinale E, Guis H. Culicoides Latreille in the sun: faunistic inventory of Culicoides species (Diptera: Ceratopogonidae) in Mayotte (Comoros Archipelago, Indian Ocean). Parasit Vectors 2019; 12:135. [PMID: 30902107 PMCID: PMC6431056 DOI: 10.1186/s13071-019-3379-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2018] [Accepted: 03/05/2019] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND The south-west insular territories of the Indian Ocean have recently received attention concerning the diversity of arthropods of medical or veterinary interest. While a recent study highlighted the circulation of Culicoides-borne viruses, namely bluetongue and epizootic hemorrhagic disease, with clinical cases in Mayotte (comprising two islands, Petite-Terre and Grand-Terre), Comoros Archipelago, no data have been published concerning the species diversity of Culicoides present on the two islands. RESULTS A total of 194,734 biting midges were collected in 18 sites, covering two collection sessions (April and June) in Mayotte. Our study reports for the first time livestock-associated Culicoides species and recorded at least 17 described Afrotropical species and one undescribed species. The most abundant species during the April collection session were C. trifasciellus (84.1%), C. bolitinos (5.4%), C. enderleini (3.9%), C. leucostictus (3.3%) and C. rhizophorensis (2.1%). All other species including C. imicola represented less than 1% of the total collection. Abundance ranged between 126-78,842 females with a mean and median abundance of 14,338 and 5111 individuals/night/site, respectively. During the June collection, the abundance per night was low, ranging between 6-475 individuals. Despite low abundance, C. trifasciellus and C. bolitinos were still the most abundant species. Culicoides sp. #50 is recorded for the first time outside South Africa. CONCLUSIONS Our study reports for the first time the Culicoides species list for Mayotte, Comoros Archipelago, Indian Ocean. The low abundance and rare occurrence of C. imicola, which is usually considered the most abundant species in the Afrotropical region, is unexpected. The most abundant and frequent species is C. trifasciellus, which is not considered as a vector species so far, but its role needs further investigation. Further work is needed to describe Culicoides sp. #50 and to carry on faunistic investigations on the other islands of the archipelago as well as in neighboring countries.
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Affiliation(s)
- Claire Garros
- Cirad, UMR ASTRE, 97490, Ste Clotilde, La Réunion, France. .,ASTRE, Univ Montpellier, Cirad, INRA, Montpellier, France.
| | - Karien Labuschagne
- Onderstepoort Veterinary Research, Agricultural Research Council-Onderstepoort Veterinary Research, EPV, Onderstepoort, South Africa
| | | | | | - Thomas Balenghien
- ASTRE, Univ Montpellier, Cirad, INRA, Montpellier, France.,Cirad, UMR ASTRE, Rabat, Morocco.,IAV Hassan II, MIMC, Rabat, Morocco
| | - Facundo Muñoz
- ASTRE, Univ Montpellier, Cirad, INRA, Montpellier, France.,Cirad, UMR ASTRE, 34398, Montpellier, France
| | - Mame Thierno Bakhoum
- ASTRE, Univ Montpellier, Cirad, INRA, Montpellier, France.,Cirad, UMR ASTRE, 34398, Montpellier, France
| | - Eric Cardinale
- Cirad, UMR ASTRE, 97490, Ste Clotilde, La Réunion, France.,ASTRE, Univ Montpellier, Cirad, INRA, Montpellier, France
| | - Hélène Guis
- ASTRE, Univ Montpellier, Cirad, INRA, Montpellier, France. .,Cirad, UMR ASTRE, Antananarivo, Madagascar. .,Epidemiology and Clinical Research Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar. .,FOFIFA DRZVP, Antananarivo, Madagascar.
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12
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Kariuki Njenga M, Bett B. Rift Valley Fever Virus—How and Where Virus Is Maintained During Inter-epidemic Periods. CURRENT CLINICAL MICROBIOLOGY REPORTS 2018. [DOI: 10.1007/s40588-018-0110-1] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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13
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Gomard Y, Cornuault J, Licciardi S, Lagadec E, Belqat B, Dsouli N, Mavingui P, Tortosa P. Evidence of multiple colonizations as a driver of black fly diversification in an oceanic island. PLoS One 2018; 13:e0202015. [PMID: 30096163 PMCID: PMC6086440 DOI: 10.1371/journal.pone.0202015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2017] [Accepted: 07/26/2018] [Indexed: 11/19/2022] Open
Abstract
True oceanic islands typically host reduced species diversity together with high levels of endemism, which make these environmental set-ups ideal for the exploration of species diversification drivers. In the present study, we used black fly species (Diptera: Simuliidae) from Reunion Island as a model to highlight the main drivers of insect species diversification in this young and remote volcanic island located in the Southwestern Indian Ocean. Using local and regional (Comoros and Seychelles archipelagos) samples as well as specimens from continental Africa, we tested the likelihood of two distinct scenarios, i.e. multiple colonizations vs. in-situ diversification. For this, posterior odds were used to test whether species from Reunion did form a monophyletic group and we estimated divergence times between species. Three out of the four previously described Reunion black fly species could be sampled, namely Simulium ruficorne, Simulium borbonense and Simulium triplex. The phylogenies based on nuclear and mitochondrial markers showed that S. ruficorne and S. borbonense are the most closely related species. Interestingly, we report a probable mitochondrial introgression between these two species although they diverged almost six million years ago. Finally, we showed that the three Reunion species did not form a monophyletic group, and, combined with the molecular datation, the results indicated that Reunion black fly diversity resulted from multiple colonization events. Thus, multiple colonizations, rather than in-situ diversification, are likely responsible for an important part of black fly diversity found on this young Darwinian island.
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Affiliation(s)
- Yann Gomard
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
- * E-mail:
| | - Josselin Cornuault
- Department of Biodiversity and Conservation, Real Jardín Botánico, RJB-CSIC, Madrid, Spain
| | - Séverine Licciardi
- CIRAD, UMR ASTRE, Sainte-Clotilde, La Réunion, France
- ASTRE, Univ Montpellier, CIRAD, INRA, Montpellier, France
- Groupement d’Intérêt Public Cyclotron Reunion Océan Indien (GIP CYROI), Sainte-Clotilde, La Réunion, France
| | - Erwan Lagadec
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
| | - Boutaïna Belqat
- Department of Biology, Faculty of Sciences, University Abdelmalek Essaâdi, Tétouan, Morocco
| | - Najla Dsouli
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien (CRVOI), Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
| | - Patrick Mavingui
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
- Université de Lyon, Lyon, France; Université Lyon 1, Villeurbanne, France; CNRS, UMR 5557, Ecologie Microbienne, Villeurbanne, France; INRA, UMR1418, Villeurbanne, France
| | - Pablo Tortosa
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
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14
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Clark MHA, Warimwe GM, Di Nardo A, Lyons NA, Gubbins S. Systematic literature review of Rift Valley fever virus seroprevalence in livestock, wildlife and humans in Africa from 1968 to 2016. PLoS Negl Trop Dis 2018; 12:e0006627. [PMID: 30036382 PMCID: PMC6072204 DOI: 10.1371/journal.pntd.0006627] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Revised: 08/02/2018] [Accepted: 06/22/2018] [Indexed: 02/03/2023] Open
Abstract
Background Rift Valley fever virus (RVFV) is a zoonotic arbovirus that causes severe disease in livestock and humans. The virus has caused recurrent outbreaks in Africa and the Arabian Peninsula since its discovery in 1931. This review sought to evaluate RVFV seroprevalence across the African continent in livestock, wildlife and humans in order to understand the spatio-temporal distribution of RVFV seroprevalence and to identify knowledge gaps and areas requiring further research. Risk factors associated with seropositivity were identified and study designs evaluated to understand the validity of their results. Methodology The Preferred Reporting of Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines were used to produce a protocol to systematically search for RVFV seroprevalence studies in PubMed and Web of Science databases. The Strengthening the Reporting of Observational studies in Epidemiology (STROBE) statement guided the evaluation of study design and analyses. Principal findings A total of 174 RVFV seroprevalence studies in 126 articles fulfilled the inclusion criteria. RVFV seroprevalence was recorded in 31 African countries from 1968 to 2016 and varied by time, species and country. RVFV seroprevalence articles including either livestock and humans or livestock and wildlife seroprevalence records were limited in number (8/126). No articles considered wildlife, livestock and human seroprevalence concurrently, nor wildlife and humans alone. Many studies did not account for study design bias or the sensitivity and specificity of diagnostic tests. Conclusions Future research should focus on conducting seroprevalence studies at the wildlife, livestock and human interface to better understand the nature of cross-species transmission of RVFV. Reporting should be more transparent and biases accounted for in future seroprevalence research to understand the true burden of disease on the African continent. Rift Valley fever virus (RVFV) is a vector-borne virus that infects wildlife and livestock, and can subsequently spread to humans. Due to the nature of the disease it has the potential to cause substantial economic and public health impacts. Rift Valley Fever (RVF) has been identified in Africa and the Arabian Peninsula, but has the potential to spread more widely. This systematic review assessed the distribution of RVF in livestock and humans in Africa by collating all the relevant studies we could find, extracting the data and critically evaluating them. Understanding when and where RVF has occurred in Africa and why some animals and humans get disease helps target control strategies and, in particular, those that reduce spread from livestock to humans. Furthermore, by evaluating past studies we can ensure that future ones are more robust and reproducible, so they can help us better understand the disease.
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Affiliation(s)
- Madeleine H. A. Clark
- Transmission Biology Group, The Pirbright Institute, Pirbright, Woking, United Kingdom
- The Jenner Institute, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom
- * E-mail:
| | - George M. Warimwe
- Biosciences Department, Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya
- Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom
| | - Antonello Di Nardo
- Vesicular Disease Reference Laboratories, The Pirbright Institute, Pirbright, Woking, United Kingdom
| | - Nicholas A. Lyons
- Vesicular Disease Reference Laboratories, The Pirbright Institute, Pirbright, Woking, United Kingdom
| | - Simon Gubbins
- Transmission Biology Group, The Pirbright Institute, Pirbright, Woking, United Kingdom
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15
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Moiane B, Mapaco L, Thompson P, Berg M, Albihn A, Fafetine J. High seroprevalence of Rift Valley fever phlebovirus in domestic ruminants and African Buffaloes in Mozambique shows need for intensified surveillance. Infect Ecol Epidemiol 2017; 7:1416248. [PMID: 29321827 PMCID: PMC5757227 DOI: 10.1080/20008686.2017.1416248] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Accepted: 12/08/2017] [Indexed: 12/31/2022] Open
Abstract
Introduction: Rift Valley fever (RVF) is an arthropod-borne disease that affects both animals and humans. RVF phlebovirus (RVFPV) is widespread in Africa and Arabian Peninsula. In Mozambique, outbreaks were reported in South; seroprevalence studies performed in livestock and water buffaloes were limited to central and south regions. We evaluated the seroprevalence of RVFPV among domestic ruminants and African buffaloes from 7 of 10 provinces of Mozambique, to understand the distribution of RVFPV and provide data for further RVF control programs. Materials and methods: A total of 1581 blood samples were collected in cattle, 1117 in goats, 85 in sheep and 69 in African buffaloes, between 2013 and 2014, and the obtained sera were analyzed by ELISA. Results and discussion: The overall seroprevalence of RVFPV domestic ruminants and African buffaloes was 25.6%. The highest was observed in cattle (37.3%) and African buffaloes (30.4%), which were higher than in previous studies within Mozambique. In south and central regions, the overall seroprevalences were higher (14.9%–62.4%) than in the north. Conclusion: This study showed the presence of anti-RVFPV antibodies in animals from all sampled provinces, suggesting that RVFPV is actively circulating among domestic ruminants and African buffaloes in Mozambique, therefore surveillance should be intensified.
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Affiliation(s)
- Belisário Moiane
- Department of Para-clinical, Veterinary Faculty, Eduardo Mondlane University, Maputo, Mozambique.,Department of Biomedical Sciences and Veterinary Public Health, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Lourenço Mapaco
- Directorate of Animal Sciences, Institute of Agrarian Research, Maputo, Mozambique
| | - Peter Thompson
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Pretoria, Republic of South Africa
| | - Mikael Berg
- Department of Biomedical Sciences and Veterinary Public Health, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Ann Albihn
- Department of Biomedical Sciences and Veterinary Public Health, Swedish University of Agricultural Sciences, Uppsala, Sweden.,Section for Environment and Biosecurity, National Veterinary Institute, Uppsala, Sweden
| | - José Fafetine
- Department of Para-clinical, Veterinary Faculty, Eduardo Mondlane University, Maputo, Mozambique
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16
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Métras R, Fournié G, Dommergues L, Camacho A, Cavalerie L, Mérot P, Keeling MJ, Cêtre-Sossah C, Cardinale E, Edmunds WJ. Drivers for Rift Valley fever emergence in Mayotte: A Bayesian modelling approach. PLoS Negl Trop Dis 2017; 11:e0005767. [PMID: 28732006 PMCID: PMC5540619 DOI: 10.1371/journal.pntd.0005767] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2017] [Revised: 08/02/2017] [Accepted: 06/30/2017] [Indexed: 11/28/2022] Open
Abstract
Rift Valley fever (RVF) is a major zoonotic and arboviral hemorrhagic fever. The conditions leading to RVF epidemics are still unclear, and the relative role of climatic and anthropogenic factors may vary between ecosystems. Here, we estimate the most likely scenario that led to RVF emergence on the island of Mayotte, following the 2006-2007 African epidemic. We developed the first mathematical model for RVF that accounts for climate, animal imports and livestock susceptibility, which is fitted to a 12-years dataset. RVF emergence was found to be triggered by the import of infectious animals, whilst transmissibility was approximated as a linear or exponential function of vegetation density. Model forecasts indicated a very low probability of virus endemicity in 2017, and therefore of re-emergence in a closed system (i.e. without import of infected animals). However, the very high proportion of naive animals reached in 2016 implies that the island remains vulnerable to the import of infectious animals. We recommend reinforcing surveillance in livestock, should RVF be reported is neighbouring territories. Our model should be tested elsewhere, with ecosystem-specific data.
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Affiliation(s)
- Raphaëlle Métras
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
| | - Guillaume Fournié
- Veterinary Epidemiology, Economics and Public Health group, Department of Pathobiology and Population Sciences, The Royal Veterinary College, Hatfield, United Kingdom
| | - Laure Dommergues
- GDS Mayotte-Coopérative Agricole des Eleveurs Mahorais, Coconi, Mayotte, France
| | - Anton Camacho
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
- Epicentre, Paris, France
| | - Lisa Cavalerie
- Centre de coopération internationale en recherche agronomique pour le développement (CIRAD) UMR ASTRE, Cyroi platform, Sainte Clotilde, La Réunion, France
- Institut National de Recherche Agronomique (INRA) UMR 1309 ASTRE, Montpellier, France
- Bureau de la Santé Animale, Direction Générale de l’Alimentation, Paris, France
- Université de La Réunion, Saint Denis, France
| | - Philippe Mérot
- Direction de l’Alimentation, de l’Agriculture et de la Forêt de Mayotte, Mamoudzou, France
| | - Matt J. Keeling
- WIDER, Warwick University, Coventry, United Kingdom
- Life Sciences, Warwick University, Coventry, United Kingdom
- Mathematics Institute, Warwick University, Coventry, United Kingdom
| | - Catherine Cêtre-Sossah
- Centre de coopération internationale en recherche agronomique pour le développement (CIRAD) UMR ASTRE, Cyroi platform, Sainte Clotilde, La Réunion, France
- Institut National de Recherche Agronomique (INRA) UMR 1309 ASTRE, Montpellier, France
| | - Eric Cardinale
- Centre de coopération internationale en recherche agronomique pour le développement (CIRAD) UMR ASTRE, Cyroi platform, Sainte Clotilde, La Réunion, France
- Institut National de Recherche Agronomique (INRA) UMR 1309 ASTRE, Montpellier, France
| | - W. John Edmunds
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
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Mroz C, Gwida M, El-Ashker M, El-Diasty M, El-Beskawy M, Ziegler U, Eiden M, Groschup MH. Seroprevalence of Rift Valley fever virus in livestock during inter-epidemic period in Egypt, 2014/15. BMC Vet Res 2017; 13:87. [PMID: 28381251 PMCID: PMC5382484 DOI: 10.1186/s12917-017-0993-8] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2016] [Accepted: 03/17/2017] [Indexed: 11/25/2022] Open
Abstract
Background Rift Valley fever virus (RVFV) caused several outbreaks throughout the African continent and the Arabian Peninsula posing significant threat to human and animal health. In Egypt the first and most important Rift Valley fever epidemic occurred during 1977/78 with a multitude of infected humans and huge economic losses in livestock. After this major outbreak, RVF epidemics re-occurred in irregular intervals between 1993 and 2003. Seroprevalence of anti-RVFV antibodies in livestock during inter-epidemic periods can be used for supporting the evaluation of the present risk exposure for animal and public health. A serosurvey was conducted during 2014/2015 in non-vaccinated livestock including camels, sheep, goats and buffalos in different areas of the Nile River Delta as well as the furthermost southeast of Egypt to investigate the presence of anti-RVFV antibodies for further evaluating of the risk exposure for animal and human health. All animals integrated in this study were born after the last Egyptian RVF epidemic in 2003 and sampled buffalos and small ruminants were not imported from other endemic countries. Results A total of 873 serum samples from apparently healthy animals from different host species (camels: n = 221; sheep: n = 438; goats: n = 26; buffalo: n = 188) were tested serologically using RVFV competition ELISA, virus neutralization test and/or an indirect immunofluorescence assay, depending on available serum volume. Sera were assessed positive when virus neutralization test alone or least two assays produced consistent positive results. The overall seroprevalence was 2.29% (95%CI: 1.51–3.07) ranging from 0% in goats, 0.46% in sheep (95%CI: 0.41–0.5), and 3.17% in camels (95%CI: 0.86–5.48) up to 5.85% in buffalos (95%CI: 2.75–8.95). Conclusion Our findings assume currently low level of circulating virus in the investigated areas and suggest minor indication for a new RVF epidemic. Further the results may indicate that during long inter-epidemic periods, maintenance of the virus occur in vectors and also most probably in buffaloes within cryptic cycle where sporadic, small and local epidemics may occur. Therefore, comprehensive and well-designed surveillance activities are urgently needed to detect first evidence for transition from endemic to epidemic cycle. Electronic supplementary material The online version of this article (doi:10.1186/s12917-017-0993-8) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Claudia Mroz
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Südufer 10, 17493, Greifswald - Isle of Riems, Germany
| | - Mayada Gwida
- Department of Hygiene and Zoonoses, Faculty of Veterinary Medicine, Mansoura University, Mansoura, 35516, Egypt
| | - Maged El-Ashker
- Department of Internal Medicine and Infectious Diseases, Faculty of Veterinary Medicine, Mansoura University, Mansoura, 35516, Egypt
| | - Mohamed El-Diasty
- Animal Health Research Institute-Mansoura Provincial Laboratory, Mansoura, Egypt
| | | | - Ute Ziegler
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Südufer 10, 17493, Greifswald - Isle of Riems, Germany
| | - Martin Eiden
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Südufer 10, 17493, Greifswald - Isle of Riems, Germany
| | - Martin H Groschup
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Südufer 10, 17493, Greifswald - Isle of Riems, Germany.
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Mroz C, Gwida M, El-Ashker M, Ziegler U, Homeier-Bachmann T, Eiden M, Groschup MH. Rift Valley fever virus infections in Egyptian cattle and their prevention. Transbound Emerg Dis 2017; 64:2049-2058. [PMID: 28116860 DOI: 10.1111/tbed.12616] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2016] [Indexed: 11/27/2022]
Abstract
Rift Valley fever virus (RVFV) causes consistently severe outbreaks with high public health impacts and economic losses in livestock in many African countries and has also been introduced to Saudi Arabia and Yemen. Egypt with its four large outbreaks in the last 40 years represents the northernmost endemic area of RVFV. The purpose of this study was to provide an insight into the current anti-RVFV antibody status in immunized as well as non-immunized dairy cattle from the Nile Delta of Egypt. During 2013-2015, a total of 4,167 dairy cattle from four governorates including Dakahlia, Damietta, Gharbia and Port Said were investigated. All cattle were born after 2007 and therewith after the last reported Egyptian RVFV outbreak in 2003. The samples derived from vaccinated animals from 26 different dairy farms as well as non-immunized cattle from 27 different smallholding flocks. All samples were examined following a three-part analysis including a commercially available competition ELISA, an in-house immunofluorescence assay and a virus neutralization test. Additionally, a subset of samples was analysed for acute infections using IgM ELISA and real-time reverse transcriptase PCR. The results indicated that the RVFV is still circulating in Egypt as about 10% of the non-immunized animals exhibited RVFV-specific antibodies. Surprisingly, the antibody prevalence in immunized animals was not significantly higher than that in non-vaccinated animals which points out the need for further evaluation of the vaccination programme. Due to the substantial role of livestock in the amplification and transmission of RVFV, further recurrent monitoring of the antibody prevalence in susceptible species is highly warranted.
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Affiliation(s)
- C Mroz
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
| | - M Gwida
- Department of Hygiene and Zoonoses, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt
| | - M El-Ashker
- Department of Internal Medicine and Infectious Diseases, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt
| | - U Ziegler
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
| | - T Homeier-Bachmann
- Institute of Epidemiology, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
| | - M Eiden
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
| | - M H Groschup
- Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany
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Olive MM, Grosbois V, Tran A, Nomenjanahary LA, Rakotoarinoro M, Andriamandimby SF, Rogier C, Heraud JM, Chevalier V. Reconstruction of Rift Valley fever transmission dynamics in Madagascar: estimation of force of infection from seroprevalence surveys using Bayesian modelling. Sci Rep 2017; 7:39870. [PMID: 28051125 PMCID: PMC5209714 DOI: 10.1038/srep39870] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2016] [Accepted: 11/29/2016] [Indexed: 11/09/2022] Open
Abstract
The force of infection (FOI) is one of the key parameters describing the dynamics of transmission of vector-borne diseases. Following the occurrence of two major outbreaks of Rift Valley fever (RVF) in Madagascar in 1990-91 and 2008-09, recent studies suggest that the pattern of RVF virus (RVFV) transmission differed among the four main eco-regions (East, Highlands, North-West and South-West). Using Bayesian hierarchical models fitted to serological data from cattle of known age collected during two surveys (2008 and 2014), we estimated RVF FOI and described its variations over time and space in Madagascar. We show that the patterns of RVFV transmission strongly differed among the eco-regions. In the North-West and Highlands regions, these patterns were synchronous with a high intensity in mid-2007/mid-2008. In the East and South-West, the peaks of transmission were later, between mid-2008 and mid-2010. In the warm and humid northwestern eco-region favorable to mosquito populations, RVFV is probably transmitted all year-long at low-level during inter-epizootic period allowing its maintenance and being regularly introduced in the Highlands through ruminant trade. The RVF surveillance of animals of the northwestern region could be used as an early warning indicator of an increased risk of RVF outbreak in Madagascar.
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Affiliation(s)
- Marie-Marie Olive
- CIRAD, Animal and Integrated Risk Management (AGIRs) Unit, Montpellier, France
- Institut Pasteur de Madagascar, Virology Unit, Antananarivo, Madagascar
| | - Vladimir Grosbois
- CIRAD, Animal and Integrated Risk Management (AGIRs) Unit, Montpellier, France
| | - Annelise Tran
- CIRAD, Animal and Integrated Risk Management (AGIRs) Unit, Montpellier, France
| | | | | | | | - Christophe Rogier
- Institut Pasteur de Madagascar, Direction, Madagascar
- Institute for Biomedical Research of the French Armed Forces (IRBA), Brétigny-Sur-Orge, France
- Unité de recherche sur les maladies infectieuses et tropicales émergentes (URMITE), Marseille, France
| | | | - Veronique Chevalier
- CIRAD, Animal and Integrated Risk Management (AGIRs) Unit, Montpellier, France
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Dellagi K, Salez N, Maquart M, Larrieu S, Yssouf A, Silaï R, Leparc-Goffart I, Tortosa P, de Lamballerie X. Serological Evidence of Contrasted Exposure to Arboviral Infections between Islands of the Union of Comoros (Indian Ocean). PLoS Negl Trop Dis 2016; 10:e0004840. [PMID: 27977670 PMCID: PMC5157944 DOI: 10.1371/journal.pntd.0004840] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2015] [Accepted: 06/20/2016] [Indexed: 01/19/2023] Open
Abstract
A cross sectional serological survey of arboviral infections in humans was conducted on the three islands of the Union of Comoros, Indian Ocean, in order to test a previously suggested contrasted exposure of the three neighboring islands to arthropod-borne epidemics. Four hundred human sera were collected on Ngazidja (Grande Comore), Mwali (Mohéli) and Ndzouani (Anjouan), and were tested by ELISA for IgM and/or IgG antibodies to Dengue (DENV), Chikungunya (CHIKV), Rift Valley fever (RVFV), West Nile (WNV), Tick borne encephalitis (TBEV) and Yellow fever (YFV) viruses and for neutralizing antibodies to DENV serotypes 1-4. Very few sera were positive for IgM antibodies to the tested viruses indicating that the sero-survey was performed during an inter epidemic phase for the investigated arbovirus infections, except for RVF which showed evidence of recent infections on all three islands. IgG reactivity with at least one arbovirus was observed in almost 85% of tested sera, with seropositivity rates increasing with age, indicative of an intense and long lasting exposure of the Comorian population to arboviral risk. Interestingly, the positivity rates for IgG antibodies to DENV and CHIKV were significantly higher on Ngazidja, confirming the previously suggested prominent exposure of this island to these arboviruses, while serological traces of WNV infection were detected most frequently on Mwali suggesting some transmission specificities associated with this island only. The study provides the first evidence for circulation of RVFV in human populations from the Union of Comoros and further suggests that the virus is currently circulating on the three islands in an inconspicuous manner. This study supports contrasted exposure of the islands of the Comoros archipelago to arboviral infections. The observation is discussed in terms of ecological factors that may affect the abundance and distribution of vector populations on the three islands as well as concurring anthropogenic factors that may impact arbovirus transmission in this diverse island ecosystem.
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Affiliation(s)
- Koussay Dellagi
- Centre de Recherche et de Veille sur les Maladies Emergentes dans l’Océan Indien, (CRVOI) Plateforme de Recherche CYROI, Sainte Clotilde, Reunion Island, France
- Unité Mixte de Recherche «Processus Infectieux en Milieu Insulaire Tropical» (UMR PIMIT), INSERM 1187 CNRS 9192 IRD 249 Université de La Réunion, Plateforme de Recherche CYROI, Sainte Clotilde, La Réunion, France
- * E-mail:
| | - Nicolas Salez
- Aix Marseille Université, IRD, EHESP French School of Public Health, EPV UMR_D 190 "Emergence des Pathologies Virales", Marseille, France
| | - Marianne Maquart
- French National Reference Centre for Arbovirus, IRBA, Marseille, France
| | - Sophie Larrieu
- Cellule Interrégionale d'Épidémiologie Océan Indien (Cire OI), Institut de Veille Sanitaire, Saint Denis, La Réunion, France
| | - Amina Yssouf
- Programme National de Lutte contre le Paludisme, Moroni, Union of the Comoros
| | - Rahamatou Silaï
- Programme National de Lutte contre le Paludisme, Moroni, Union of the Comoros
| | | | - Pablo Tortosa
- Centre de Recherche et de Veille sur les Maladies Emergentes dans l’Océan Indien, (CRVOI) Plateforme de Recherche CYROI, Sainte Clotilde, Reunion Island, France
- Unité Mixte de Recherche «Processus Infectieux en Milieu Insulaire Tropical» (UMR PIMIT), INSERM 1187 CNRS 9192 IRD 249 Université de La Réunion, Plateforme de Recherche CYROI, Sainte Clotilde, La Réunion, France
| | - Xavier de Lamballerie
- Aix Marseille Université, IRD, EHESP French School of Public Health, EPV UMR_D 190 "Emergence des Pathologies Virales", Marseille, France
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21
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Nanyingi MO, Muchemi GM, Thumbi SM, Ade F, Onyango CO, Kiama SG, Bett B. Seroepidemiological Survey of Rift Valley Fever Virus in Ruminants in Garissa, Kenya. Vector Borne Zoonotic Dis 2016; 17:141-146. [PMID: 27929928 DOI: 10.1089/vbz.2016.1988] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
INTRODUCTION Rift Valley fever (RVF) is a vector-borne zoonotic disease caused by phlebovirus in the family Bunyaviridae. In Kenya, major outbreaks occurred in 1997-1998 and 2006-2007 leading to human deaths, huge economic losses because of livestock morbidity, mortality, and restrictions on livestock trade. AIM This study was conducted to determine RVF seroprevalence in cattle, sheep, and goats during an interepidemic period in Garissa County in Kenya. METHODS In July 2013, we performed a cross-sectional survey and sampled 370 ruminants from eight RVF-prone areas of Garissa County. Rift Valley fever virus (RVFV) antibodies were detected using a multispecies competitive enzyme-linked immunosorbent assay. Mixed effect logistic regression models were used to determine the association between RVF seropositivity and species, sex, age, and location of the animals. RESULTS A total of 271 goats, 87 sheep, and 12 cattle were sampled and the overall immunoglobulin G seroprevalence was 27.6% (95% CI [23-32.1]). Sheep, cattle, and goats had seroprevalences of 32.2% (95% CI [20.6-31]), 33.3% (95% CI [6.7-60]), and 25.8% (95% CI [22.4-42]), respectively. Seropositivity in males was 31.8% (95% CI [22.2-31.8]), whereas that of females was 27% (95% CI [18.1-45.6]). CONCLUSIONS The high seroprevalence suggests RVFV circulation in domestic ruminants in Garissa and may be indicative of a subclinal infection. These findings provide evidence of RVF disease status that will assist decision-makers to flag areas of high risk of RVF outbreaks and prioritize the implementation of timely and cost-effective vaccination programs.
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Affiliation(s)
- Mark O Nanyingi
- 1 Department of Public Health, Pharmacology and Toxicology, University of Nairobi , Nairobi, Kenya .,2 Department of Biomedical Sciences, Colorado State University , Fort Collins, Colorado.,3 Center for Global Health Research, Kenya Medical Research Institute , Kisumu, Kenya
| | - Gerald M Muchemi
- 1 Department of Public Health, Pharmacology and Toxicology, University of Nairobi , Nairobi, Kenya
| | - Samuel M Thumbi
- 3 Center for Global Health Research, Kenya Medical Research Institute , Kisumu, Kenya .,4 Paul G. Allen School for Global Animal Health, Washington State University , Pullman, Washington
| | - Fredrick Ade
- 3 Center for Global Health Research, Kenya Medical Research Institute , Kisumu, Kenya
| | - Clayton O Onyango
- 3 Center for Global Health Research, Kenya Medical Research Institute , Kisumu, Kenya
| | - Stephen G Kiama
- 5 Wangari Maathai Institute for Peace and Environmental Studies, University of Nairobi , Nairobi, Kenya
| | - Bernard Bett
- 6 International Livestock Research Institute , Nairobi, Kenya
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22
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Métras R, Cavalerie L, Dommergues L, Mérot P, Edmunds WJ, Keeling MJ, Cêtre-Sossah C, Cardinale E. The Epidemiology of Rift Valley Fever in Mayotte: Insights and Perspectives from 11 Years of Data. PLoS Negl Trop Dis 2016; 10:e0004783. [PMID: 27331402 PMCID: PMC4917248 DOI: 10.1371/journal.pntd.0004783] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 05/27/2016] [Indexed: 12/27/2022] Open
Abstract
Rift Valley fever (RVF) is a zoonotic arboviral disease that is a threat to human health, animal health and production, mainly in Sub-Saharan Africa. RVF virus dynamics have been poorly studied due to data scarcity. On the island of Mayotte in the Indian Ocean, off the Southeastern African coast, RVF has been present since at least 2004. Several retrospective and prospective serological surveys in livestock have been conducted over eleven years (2004-15). These data are collated and presented here. Temporal patterns of seroprevalence were plotted against time, as well as age-stratified seroprevalence. Results suggest that RVF was already present in 2004-07. An epidemic occurred between 2008 and 2010, with IgG and IgM peak annual prevalences of 36% in 2008-09 (N = 142, n = 51, 95% CI [17-55]) and 41% (N = 96, n = 39, 95% CI [25-56]), respectively. The virus seems to be circulating at a low level since 2011, causing few new infections. In 2015, about 95% of the livestock population was susceptible (IgG annual prevalence was 6% (N = 584, n = 29, 95% CI [3-10])). Monthly rainfall varied a lot (2-540mm), whilst average temperature remained high with little variation (about 25-30°C). This large dataset collected on an insular territory for more than 10 years, suggesting a past epidemic and a current inter-epidemic period, represents a unique opportunity to study RVF dynamics. Further data collection and modelling work may be used to test different scenarios of animal imports and rainfall pattern that could explain the observed epidemiological pattern and estimate the likelihood of a potential re-emergence.
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Affiliation(s)
- Raphaëlle Métras
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
| | - Lisa Cavalerie
- UMR CMAEE, CIRAD, Sainte-Clotilde, La Réunion, France
- UMR1309 CMAEE, INRA, Montpellier, France
- Bureau de la Santé Animale, Direction Générale de l’Alimentation, Paris, France
- Université de La Réunion, St Denis, France
| | - Laure Dommergues
- GDS Mayotte-Coopérative Agricole des Eleveurs Mahorais, Coconi, Mayotte, France
| | - Philippe Mérot
- Direction de l’Alimentation, de l’Agriculture et de la Forêt de Mayotte, Mamoudzou, France
| | - W. John Edmunds
- Centre for the Mathematical Modelling of Infectious Diseases, Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
| | - Matt J. Keeling
- WIDER, Warwick University, Coventry, United Kingdom
- Life Sciences, Warwick University, Coventry, United Kingdom
- Mathematics Institute, Warwick University, Coventry, United Kingdom
| | - Catherine Cêtre-Sossah
- UMR CMAEE, CIRAD, Sainte-Clotilde, La Réunion, France
- UMR1309 CMAEE, INRA, Montpellier, France
| | - Eric Cardinale
- UMR CMAEE, CIRAD, Sainte-Clotilde, La Réunion, France
- UMR1309 CMAEE, INRA, Montpellier, France
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23
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A Stochastic Model to Study Rift Valley Fever Persistence with Different Seasonal Patterns of Vector Abundance: New Insights on the Endemicity in the Tropical Island of Mayotte. PLoS One 2015; 10:e0130838. [PMID: 26147799 PMCID: PMC4493030 DOI: 10.1371/journal.pone.0130838] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Accepted: 05/25/2015] [Indexed: 12/24/2022] Open
Abstract
Rift Valley fever (RVF) is a zoonotic vector-borne disease causing abortion storms in cattle and human epidemics in Africa. Our aim was to evaluate RVF persistence in a seasonal and isolated population and to apply it to Mayotte Island (Indian Ocean), where the virus was still silently circulating four years after its last known introduction in 2007. We proposed a stochastic model to estimate RVF persistence over several years and under four seasonal patterns of vector abundance. Firstly, the model predicted a wide range of virus spread patterns, from obligate persistence in a constant or tropical environment (without needing vertical transmission or reintroduction) to frequent extinctions in a drier climate. We then identified for each scenario of seasonality the parameters that most influenced prediction variations. Persistence was sensitive to vector lifespan and biting rate in a tropical climate, and to host viraemia duration and vector lifespan in a drier climate. The first epizootic peak was primarily sensitive to viraemia duration and thus likely to be controlled by vaccination, whereas subsequent peaks were sensitive to vector lifespan and biting rate in a tropical climate, and to host birth rate and viraemia duration in arid climates. Finally, we parameterized the model according to Mayotte known environment. Mosquito captures estimated the abundance of eight potential RVF vectors. Review of RVF competence studies on these species allowed adjusting transmission probabilities per bite. Ruminant serological data since 2004 and three new cross-sectional seroprevalence studies are presented. Transmission rates had to be divided by more than five to best fit observed data. Five years after introduction, RVF persisted in more than 10% of the simulations, even under this scenario of low transmission. Hence, active surveillance must be maintained to better understand the risk related to RVF persistence and to prevent new introductions.
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Cêtre-Sossah C, Kwiatek O, Faharoudine A, Soulé M, Moutroifi YO, Vrel MA, Salami H, Rassoul S, Asnaoui M, Moindjie Y, Albina E, Libeau G, Cardinale E. Impact and Epidemiological Investigations into the Incursion and Spread of Peste des Petits Ruminants in the Comoros Archipelago: An Increased Threat to Surrounding Islands. Transbound Emerg Dis 2014; 63:452-9. [PMID: 25430822 DOI: 10.1111/tbed.12296] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2014] [Indexed: 10/24/2022]
Abstract
Late October 2012, a great number of deaths of unknown origin occurred in goat herds in the suburbs of Ngazidja, located in the Comoros archipelago. Few weeks later, laboratory testing requested by the animal health authorities resulted in the identification of peste des petits ruminants (PPR) infection. Notably, the Index case could be attributed to a sick goat imported from Tanzania. Viral isolation was successful from the lungs leading to the whole N nucleoprotein gene sequencing. Phylogenetic analysis revealed that the strain belongs to the lineage III which includes strains of eastern African origin. In addition, to evaluate the impact of PPR on the Comorian indigenous domesticated ruminant population, a cross-sectional PPR serological survey was conducted between April and July 2013. A low overall PPRV antibody prevalence 2.24% (95% CI [1.38; 3.08]) was detected with a Grande Comore prevalence of 3.34% (IC = [2.09; 4.63]) with a limited spread of the disease mainly due to farm practices such as limited contacts between farm animals and rapid slaughtering of sick animals.
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Affiliation(s)
- C Cêtre-Sossah
- UMR CMAEE, CIRAD, Sainte Clotilde, La Réunion, France.,UMR 1309 CMAEE, INRA, Montpellier, France.,Plateforme de recherche CYROI, Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien (CRVOI), Sainte Clotilde, La Réunion, France
| | - O Kwiatek
- UMR 1309 CMAEE, INRA, Montpellier, France.,UMR CMAEE, CIRAD, Montpellier, France
| | - A Faharoudine
- Vice-President, Ministry of Agriculture, Fisheries, Environment, Industry, Energy and Handicraft, Moroni, Republic of Comoros
| | - M Soulé
- Vice-President, Ministry of Agriculture, Fisheries, Environment, Industry, Energy and Handicraft, Moroni, Republic of Comoros
| | - Y O Moutroifi
- Vice-President, Ministry of Agriculture, Fisheries, Environment, Industry, Energy and Handicraft, Moroni, Republic of Comoros
| | - M A Vrel
- UMR CMAEE, CIRAD, Sainte Clotilde, La Réunion, France.,UMR 1309 CMAEE, INRA, Montpellier, France.,Plateforme de recherche CYROI, Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien (CRVOI), Sainte Clotilde, La Réunion, France
| | - H Salami
- UMR 1309 CMAEE, INRA, Montpellier, France.,UMR CMAEE, CIRAD, Montpellier, France
| | - S Rassoul
- Institut National de la recherche agricole, la pêche et l'environnement, Vice-présidence en charge de la Production, Moroni, Republic of Comoros
| | - M Asnaoui
- Institut National de la recherche agricole, la pêche et l'environnement, Vice-présidence en charge de la Production, Moroni, Republic of Comoros
| | - Y Moindjie
- Vice-President, Ministry of Agriculture, Fisheries, Environment, Industry, Energy and Handicraft, Moroni, Republic of Comoros
| | - E Albina
- UMR 1309 CMAEE, INRA, Montpellier, France.,UMR CMAEE, CIRAD, Petit Bourg, Guadeloupe, France
| | - G Libeau
- UMR 1309 CMAEE, INRA, Montpellier, France.,UMR CMAEE, CIRAD, Montpellier, France
| | - E Cardinale
- UMR CMAEE, CIRAD, Sainte Clotilde, La Réunion, France.,UMR 1309 CMAEE, INRA, Montpellier, France.,Plateforme de recherche CYROI, Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien (CRVOI), Sainte Clotilde, La Réunion, France
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25
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Maquart M, Pascalis H, Abdouroihamane S, Roger M, Abdourahime F, Cardinale E, Cêtre-Sossah C. Phylogeographic Reconstructions of a Rift Valley Fever Virus Strain Reveals Transboundary Animal Movements from Eastern Continental Africa to the Union of the Comoros. Transbound Emerg Dis 2014; 63:e281-5. [PMID: 25213037 DOI: 10.1111/tbed.12267] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2014] [Indexed: 12/31/2022]
Abstract
Major explosive outbreaks of Rift Valley fever (RVF), an arthropod borne zoonotic disease, occur in humans and animals with significant mortality and economic impact across continental Africa and the Indian Ocean region (Madagascar, the Comoros archipelago). Recently, sporadic human cases have been reported in Mayotte and Grande Comore, two islands belonging to the Comoros archipelago. To identify the hypothetical source of virus introduction in an inter-epidemic or a post-epidemic period, a longitudinal survey of livestock was set up in Comorian ruminant populations, known to be susceptible hosts. The phylogeographic genomic analysis has shown that RVF virus (RVFV) detected in a zebu collected in Anjouan in August 2011 seems to be related to the last known epidemic of RVF which occurred in East Africa and Madagascar (2007-2009). This result highlights the fact that RVFV is maintained within local livestock populations and transboundary animal movements from eastern continental Africa to Indian Ocean islands likely result in RVFV crossover.
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Affiliation(s)
- M Maquart
- CIRAD, UMR CMAEE, Sainte Clotilde, La Réunion, France.,INRA, UMR 1309 CMAEE, Montpellier, France.,CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), CYROI, Sainte Clotilde, La Réunion, France
| | - H Pascalis
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), CYROI, Sainte Clotilde, La Réunion, France.,IRD, Sainte Clotilde, La Réunion, France
| | - S Abdouroihamane
- Vice-Présidence en charge de l'Agriculture, l'Elevage, la Pêche, l'Industrie, l'Energie et l'Artisanat, Moroni, Union des Comores
| | - M Roger
- CIRAD, UMR CMAEE, Sainte Clotilde, La Réunion, France.,INRA, UMR 1309 CMAEE, Montpellier, France.,CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), CYROI, Sainte Clotilde, La Réunion, France
| | - F Abdourahime
- Vice-Présidence en charge de l'Agriculture, l'Elevage, la Pêche, l'Industrie, l'Energie et l'Artisanat, Moroni, Union des Comores
| | - E Cardinale
- CIRAD, UMR CMAEE, Sainte Clotilde, La Réunion, France.,INRA, UMR 1309 CMAEE, Montpellier, France.,CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), CYROI, Sainte Clotilde, La Réunion, France
| | - C Cêtre-Sossah
- CIRAD, UMR CMAEE, Sainte Clotilde, La Réunion, France.,INRA, UMR 1309 CMAEE, Montpellier, France.,CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), CYROI, Sainte Clotilde, La Réunion, France
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