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Shen Z, Koch NM, Seid CA, Tilic E, Rouse GW. Three New Species of Deep-Sea Wood-Associated Sea Stars (Asteroidea: Caymanostellidae) from the Eastern Pacific. Zootaxa 2024; 5536:351-388. [PMID: 39646368 DOI: 10.11646/zootaxa.5536.3.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2024] [Indexed: 12/10/2024]
Abstract
Caymanostellidae is a group of rarely collected and morphologically unusual sea stars that have been exclusively encountered on wood falls in the deep sea. There are currently three genera and seven species described, occurring in the Atlantic, Pacific and Indian Oceans with a depth range between 418 and 6780 m. Three new species are here described from specimens collected from wood falls in multiple localities across the Pacific margin of Costa Rica and near the Gulf of California (Mexico): Caymanostella scrippscognaticausa sp. nov., Caymanostella davidalani sp. nov. and Caymanostella loresae sp. nov. These records expand the known geographical distribution of caymanostellids and constitute their first report from wood falls found at methane seeps. This study also includes the first descriptions of early-stage juvenile caymanostellids and reveals that traits previously considered useful for diagnosis might represent intraspecific and ontogenetic variability, with important consequences for caymanostellid taxonomy.
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Affiliation(s)
- Zihui Shen
- Scripps Institution of Oceanography; University of California San Diego; La Jolla; CA 92093-0202; USA.
| | - Nicolás Mongiardino Koch
- Scripps Institution of Oceanography; University of California San Diego; La Jolla; CA 92093-0202; USA.
| | - Charlotte A Seid
- Scripps Institution of Oceanography; University of California San Diego; La Jolla; CA 92093-0202; USA.
| | - Ekin Tilic
- Department of Marine Zoology; Senckenberg Research Institute and Natural History Museum;60325 Frankfurt; Germany.
| | - Greg W Rouse
- Scripps Institution of Oceanography; University of California San Diego; La Jolla; CA 92093-0202; USA.
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2
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Fau M, Wright DF, Ewin TA, Gale AS, Villier L. Phylogenetic and taxonomic revisions of Jurassic sea stars support a delayed evolutionary origin of the Asteriidae. PeerJ 2024; 12:e18169. [PMID: 39494292 PMCID: PMC11531740 DOI: 10.7717/peerj.18169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Accepted: 09/03/2024] [Indexed: 11/05/2024] Open
Abstract
Background The superorder Forcipulatacea is a major clade of sea stars with approximately 400 extant species across three orders (Forcipulatida, Brisingida, Zorocallida). Over the past century, the systematics of Forcipulatacea have undergone multiple revisions by various authors, with some considering numerous families such as Asteriidae, Zoroasteridae, Pedicellasteridae, Stichasteridae, Heliasteridae, Labidiasteridae, and Neomorphasteridae, while others recognized only two families (i.e., Asteriidae and Zoroasteridae). Recent molecular analyses have shown the artificial nature of some of these groupings. Notably, four well-supported clades (Zorocallida, Brisingida, Stichasteridae, and Asteriidae) emerged from a synthesis of morphological and molecular evidence. The majority of extinct forcipulatacean species have been placed in modern families. However, many of these fossil species are in need of revision, especially those species placed within the Asteriidae, the largest of all forcipulatacean families. Methods In light of recent advancements in forcipulatacean systematics, we comprehensively reassess six well-preserved Jurassic forcipulatacean taxa, including the earliest crown-group members from the Hettangian (∼201.4 Ma), and also describe two new Jurassic genera, Forbesasterias gen. nov. and Marbleaster gen. nov. We assembled the largest and most comprehensive phylogenetic matrix for this group, sampling 42 fossil and extant forcipulatacean species for 120 morphological characters. To infer phylogenetic relationships and construct an evolutionary timeline for the diversification of major clades, we conducted a Bayesian tip-dating analysis incorporating the fossilized birth-death process. A total of 13 fossil species were sampled in our analysis, including six taxonomically revaluated herein, two recently reappraised species from the Jurassic, and five additional species from the Cretaceous and Miocene. Results Contrary to prior assumptions, our results indicate that none of the Jurassic taxa investigated belong to Asteriidae or any other modern families, and instead represent stem-forcipulatids. Furthermore, our phylogenetic results suggest that Asteriidae likely originated during the late Cretaceous. Our findings highlight a greater early diversity within the Forcipulatacea than previously presumed, challenging existing perceptions of the evolutionary history of this significant clade of marine invertebrates.
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Affiliation(s)
- Marine Fau
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC, United States of America
| | - David F. Wright
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC, United States of America
- Sam Noble Oklahoma Museum of Natural History, University of Oklahoma, Norman, OK, United States of America
- School of Geosciences, University of Oklahoma, Norman, OK, United States of America
| | | | - Andrew S. Gale
- Science Group, Natural History Museum, London, United Kingdom
- School of the Environment, Geography and Geological Sciences, University of Portsmouth, Portsmouth, United Kingdom
| | - Loïc Villier
- Centre de Recherche en Paléontologie—Paris, Sorbonne Université, Paris, France
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3
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Alboasud M, Jeong H, Lee T. Complete Mitochondrial Genomes and Phylogenetic Analysis of Genus Henricia (Asteroidea: Spinulosida: Echinasteridae). Int J Mol Sci 2024; 25:5575. [PMID: 38891763 PMCID: PMC11171911 DOI: 10.3390/ijms25115575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 05/16/2024] [Accepted: 05/17/2024] [Indexed: 06/21/2024] Open
Abstract
The genus Henricia is known to have intraspecific morphological variations, making species identification difficult. Therefore, molecular phylogeny analysis based on genetic characteristics is valuable for species identification. We present complete mitochondrial genomic sequences of Henricia longispina aleutica, H. reniossa, and H. sanguinolenta for the first time in this study. This study will make a significant contribution to our understanding of Henricia species and its relationships within the class Asteroidea. Lengths of mitochondrial genomes of the three species are 16,217, 16,223, and 16,194 bp, respectively, with a circular form. These genomes contained 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a D-loop. The gene order and direction aligned with other asteroid species. Phylogenetic relationship analysis showed that our Henricia species were in a monophyletic clade with other Henricia species and in a large clade with species (Echinaster brasiliensis) from the same family. These findings provide valuable insight into understanding the phylogenetic relationships of species in the genus Henricia.
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Affiliation(s)
- Maria Alboasud
- Marine Biological Resource Institute, Sahmyook University, Seoul 01795, Republic of Korea;
- Department of Convergence Science, Sahmyook University, Seoul 01795, Republic of Korea
| | - Hoon Jeong
- Department of Animal Resources Science, Sahmyook University, Seoul 01795, Republic of Korea
| | - Taekjun Lee
- Marine Biological Resource Institute, Sahmyook University, Seoul 01795, Republic of Korea;
- Department of Animal Resources Science, Sahmyook University, Seoul 01795, Republic of Korea
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4
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Mah CL. Two New Taxa of Goniasteridae (Asteroidea, Echinodermata) and Noteworthy Observations of Deep-Sea Asteroidea by the NOAA Ship Okeanos Explorer in the North and Tropical Atlantic. Zootaxa 2024; 5432:461-508. [PMID: 39645772 DOI: 10.11646/zootaxa.5432.4.2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Indexed: 12/10/2024]
Abstract
Two new species and one new genus, collected by NOAA ship Okeanos Explorer, Bathyceramaster kelliottae n. sp. and Rhianastra isosceles n. gen., n. sp. (Goniasteridae; Asteroidea) are described from deep-sea settings in the North Atlantic. Two potentially undescribed species are observed from imagery and new in situ observations further elucidate life modes and feeding behavior of several species from North Atlantic deep-sea habitats. New occurrences of Atlantic Neomorphaster are presented and Neomorphaster forcipatus is synonymized with Neomorphaster margaritaceus.
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Affiliation(s)
- Christopher L Mah
- Department of Invertebrate Zoology; National Museum of Natural History; Smithsonian Institution; Washington D.C. 20007.
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5
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Zhang R, Fau M, Mah C, Eléaume M, Zhang D, Zhou Y, Lu B, Wang C. Systematics of deep-sea starfish order Brisingida (Echinodermata: Asteroidea), with a revised classification and assessments of morphological characters. Mol Phylogenet Evol 2024; 191:107993. [PMID: 38103706 DOI: 10.1016/j.ympev.2023.107993] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2023] [Revised: 12/06/2023] [Accepted: 12/12/2023] [Indexed: 12/19/2023]
Abstract
Brisingida Fisher 1928 is one of the seven currently recognised starfish orders, and one of the least known taxa as being exclusive deep-sea inhabitants. Modern deep-sea expeditions revealed their common occurrences in various deep-sea settings including seamounts, basins and hydrothermal vent peripheral, underlining the necessity of clarifying their global diversity and phylogeny. In this study, we present a comprehensive molecular phylogeny of Brisingida which encompasses the highest taxonomic diversity to date. DNA sequences (COI, 16S, 12S and 28S) were obtained from 225 specimens collected in the global ocean, identified as 58 species spanning 15 of the 17 extant genera. Phylogenetic relationship was inferred using both maximum likelihood and Bayesian inference methods, revealing polyphyletic families and genera and indicating nonnegligible bias in prior morphology-based systematics. Based on the new phylogeny, a novel classification of the order, consisting of 5 families and 17 genera, is proposed. Families Odinellidae, Brisingasteridae and Novodiniidae (sensu Clark and Mah, 2001) were resurrected to encompass the genera Odinella, Brisingaster and Novodinia. Brisingidae and Freyellidae were revised to include 11 and 3 genera, respectively. A new genus and species, two new subgenera and seven new combinations are described and a key to each genus and family is provided. Transformations of morphological traits were evaluated under the present phylogenetic hypothesis. A series of paedomorphic characters were found in many genera and species, which led to a high degree of homoplasy across phylogenetically distant groups. Our results provide new insights in the phylogeny and ontogeny of the order, and highlight the necessity to evaluate character convergence under sound phylogenetic hypothesis.
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Affiliation(s)
- Ruiyan Zhang
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, China; School of Oceanography, Shanghai Jiao Tong University, Shanghai, China
| | - Marine Fau
- Centre de Recherche en Paléontologie - Paris, Sorbonne Université, 4 place Jussieu, 75005 Paris, France; Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA
| | - Christopher Mah
- Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA
| | - Marc Eléaume
- Départment Origines et Évolution, Muséum National d'Histoire Naturelle, Paris, France
| | - Dongsheng Zhang
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, China; School of Oceanography, Shanghai Jiao Tong University, Shanghai, China; Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, China
| | - Yadong Zhou
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, China; Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, China
| | - Bo Lu
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, China
| | - Chunsheng Wang
- Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, China; School of Oceanography, Shanghai Jiao Tong University, Shanghai, China; Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, China.
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6
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Liu J, Zhou Y, Pu Y, Zhang H. A chromosome-level genome assembly of a deep-sea starfish (Zoroaster cf. ophiactis). Sci Data 2023; 10:506. [PMID: 37528102 PMCID: PMC10394057 DOI: 10.1038/s41597-023-02397-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Accepted: 07/18/2023] [Indexed: 08/03/2023] Open
Abstract
Understanding of adaptation and evolution of organisms in the deep sea requires more genomic resources. Zoroaster cf. ophiactis is a sea star in the family Zoroasteridae occurring exclusively in the deep sea. In this study, a chromosome-level genome assembly for Z. cf. ophiactis was generated by combining Nanopore long-read, Illumina short-read, and Hi-C sequencing data. The final assembly was 1,002.0 Mb in length, with a contig N50 of 376 Kb and a scaffold N50 of 40.4 Mb, and included 22 pseudo-chromosomes, covering 92.3% of the assembly. Completeness analysis evaluated with BUSCO revealed that 95.91% of the metazoan conserved genes were complete. Additionally, 39,426 protein-coding genes were annotated for this assembly. This chromosome-level genome assembly represents the first high-quality genome for the deep-sea Asteroidea, and will provide a valuable resource for future studies on evolution and adaptation of deep-sea echinoderms.
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Affiliation(s)
- Jun Liu
- Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, Hainan, China
| | - Yang Zhou
- Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, Hainan, China
| | - Yujin Pu
- Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, Hainan, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Haibin Zhang
- Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, Hainan, China.
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7
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Mah CL. New Genera, Species, and observations on the biology of Antarctic Valvatida (Asteroidea). Zootaxa 2023; 5310:1-88. [PMID: 37518658 DOI: 10.11646/zootaxa.5310.1.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Indexed: 08/01/2023]
Abstract
Assessment of Antarctic taxonomic diversity for asteroids and other taxa for poorly studied or unknown regions, such as the deep-sea, will be important for our understanding of these understudied habitats. Eleven new species and a new genus are described from three families (Asterinidae, Goniasteridae, Solasteridae) within the Valvatida, nearly all of which were collected from deep-sea settings below 1000 m by the US Antarctic Research Program in the 1960s. A new subfamily, the Kampylasterinae subfam. nov. is designated for Kampylaster and Astrotholus nov. gen. which were supported as sister taxa on a monophyletic clade within the Asterinidae. Astrotholus nov. gen. is described to accommodate "Anseropoda" antarctica and four new bathyal and abyssal species, which are a significant morphological divergence from the typological definition of Anseropoda. New species of the goniasterid Notioceramus and the solasterid Paralophaster are also described from bathyal depths (2000-3000 m). Paralophaster ferax n. sp. is among the deepest asteroids known to brood, is the first brooding species within Paralophaster and the second species in the Solasteridae known to brood. Following examination of the type and molecular data, Lophaster densus is found to be included within Paralophaster. A review of Antarctic Lophaster species shows additional specimens of Lophaster abbreviatus which support it as a distinct species from Lophaster stellans. New occurrence data for bathyal Antarctic Asteroidea as well as unusual-gut content observations of shallower-water species are also included.
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Affiliation(s)
- Christopher L Mah
- Dept. of Invertebrate Zoology; NMNH; NHB-163; Smithsonian Institution; Washington D.C. 20560.
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8
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Li L, Yu Y, Wu W, Wang P. Extraction, Characterization and Osteogenic Activity of a Type I Collagen from Starfish ( Asterias amurensis). Mar Drugs 2023; 21:md21050274. [PMID: 37233468 DOI: 10.3390/md21050274] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 04/18/2023] [Accepted: 04/24/2023] [Indexed: 05/27/2023] Open
Abstract
Outbreaks of starfish (Asterias amurensis) pose a major threat to aquaculture and marine ecosystems in Qingdao, China, and no effective methods have been found to control them. A comprehensive study of collagen in starfish could be an alternative to high efficient utilization. Based on this, collagen was firstly extracted from Qingdao A. amurensis. Then, its protein pattern, amino acid composition, secondary structure, microstructure and thermal stability were investigated. The results showed that the A. amurensis collagen (AAC) is a type I collagen composed of α1, α2, and β chains. Glycine, hydroxyproline, and alanine were the major amino acids. The melting temperature was 57.7 °C. From FTIR, UV spectra and CD chromatography, the AAC had an intact triple helix and secondary structure, and microstructural analysis showed that the AAC had a loose, fibrous porous structure. Next, the osteogenic differentiation effect of AAC on Mouse bone marrow stem cells (BMSCs) was investigated, and the results showed that AAC induced osteogenic differentiation of cells by promoting the proliferation of BMSCs, enhancing alkaline phosphatase (ALP) activity, promoting cell mineralization nodules and upregulating the expression of mRNA of relevant osteogenic genes. These results suggest that AAC might have the potential application to bone health-related functional foods.
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Affiliation(s)
- Lingcui Li
- Department of Marine Pharmacology, College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China
- Marine Biomedical Science and Technology Innovation Platform of Lin-Gang Special Area, Shanghai 201306, China
| | - Yu Yu
- Qingdao Institute for Food and Drug Control, Qingdao 266071, China
| | - Wenhui Wu
- Department of Marine Pharmacology, College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China
- Marine Biomedical Science and Technology Innovation Platform of Lin-Gang Special Area, Shanghai 201306, China
| | - Peipei Wang
- Department of Marine Pharmacology, College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China
- Marine Biomedical Science and Technology Innovation Platform of Lin-Gang Special Area, Shanghai 201306, China
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9
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Tomholt L, Baum D, Wood RJ, Weaver JC. High-throughput segmentation, data visualization, and analysis of sea star skeletal networks. J Struct Biol 2023; 215:107955. [PMID: 36905978 DOI: 10.1016/j.jsb.2023.107955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 02/03/2023] [Accepted: 03/06/2023] [Indexed: 03/11/2023]
Abstract
The remarkably complex skeletal systems of the sea stars (Echinodermata, Asteroidea), consisting of hundreds to thousands of individual elements (ossicles), have intrigued investigators for more than 150 years. While the general features and structural diversity of isolated asteroid ossicles have been well documented in the literature, the task of mapping the spatial organization of these constituent skeletal elements in a whole-animal context represents an incredibly laborious process, and as such, has remained largely unexplored. To address this unmet need, particularly in the context of understanding structure-function relationships in these complex skeletal systems, we present an integrated approach that combines micro-computed tomography, semi-automated ossicle segmentation, data visualization tools, and the production of additively manufactured tangible models to reveal biologically relevant structural data that can be rapidly analyzed in an intuitive manner. In the present study, we demonstrate this high-throughput workflow by segmenting and analyzing entire skeletal systems of the giant knobby star, Pisaster giganteus, at four different stages of growth. The in-depth analysis, presented herein, provides a fundamental understanding of the three-dimensional skeletal architecture of the sea star body wall, the process of skeletal maturation during growth, and the relationship between skeletal organization and morphological characteristics of individual ossicles. The widespread implementation of this approach for investigating other species, subspecies, and growth series has the potential to fundamentally improve our understanding of asteroid skeletal architecture and biodiversity in relation to mobility, feeding habits, and environmental specialization in this fascinating group of echinoderms.
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Affiliation(s)
- Lara Tomholt
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA; Harvard University Graduate School of Design, 48 Quincy St, Cambridge, MA 02138, USA
| | - Daniel Baum
- Department of Visual and Data-Centric Computing, Zuse Institute Berlin, 14195 Berlin, Germany
| | - Robert J Wood
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA; Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA
| | - James C Weaver
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA; Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA 02115, USA.
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10
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Sobczyk R, Serigstad B, Pabis K. High polychaete diversity in the Gulf of Guinea (West African continental margin): The influence of local and intermediate scale ecological factors on a background of regional patterns. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 859:160046. [PMID: 36356769 DOI: 10.1016/j.scitotenv.2022.160046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 11/03/2022] [Accepted: 11/04/2022] [Indexed: 06/16/2023]
Abstract
The Tropical East Atlantic is one of the least studied areas in the world's oceans, and thus a blank spot on the map of marine studies. Shaped by dynamic currents and shifting water masses, it is a key region in discussions about marine ecology, biodiversity, and zoogeography, while facing numerous, poorly understood, and unmonitored threats associated with climate change, acidification, and pollution. Polychaete diversity was assessed along four transects along the Ghana coast, from shallow to deep bottoms and distributed along the whole upwelling marine ecoregion. Despite high sampling effort, steep species accumulation curves demonstrated the necessity of further sampling in the region. We observed zonation of fauna by depth, and a decrease in species richness from 25 m to 1000 m depth. Polychaete communities were influenced by sediment type, presence of oxygen minimum zones, and local disturbances caused by elevated barium concentrations. Similar evenness along the depth gradient reflected the importance of rare species in the community structure. Differences in phylogenetic diversity, as reflected by taxonomic distinctness, were small, which suggested high ecosystem stability. The highly variable species richness at small scale (meters) showed the importance of ecological factors giving rise to microhabitat diversity, although we also noticed intermediate scale (50-300 km) differences affecting community structure. About 44 % of the species were rare (i.e. recorded only in three or fewer samples), highlighting the level of patchiness, while one fifth was distributed on all transects, therefore along the whole upwelling ecoregion, demonstrating the influence of the regional species pool on local communities at particular stations. Our study yielded 253 species, increasing the number of polychaetes known from this region by at least 50 %. This casts doubt on previous findings regarding Atlantic bioregionalization, biodiversity estimates and endemism, which appear to have been more pronouncedly affected by sampling bias than previously thought.
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Affiliation(s)
- Robert Sobczyk
- Department of Invertebrates Zoology and Hydrobiology, University of Lodz, Lodz, Poland.
| | - Bjorn Serigstad
- Center for Development Cooperation in Fisheries, Institute of Marine Research, Bergen, Norway
| | - Krzysztof Pabis
- Department of Invertebrates Zoology and Hydrobiology, University of Lodz, Lodz, Poland
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11
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Nanglu K, Cole SR, Wright DF, Souto C. Worms and gills, plates and spines: the evolutionary origins and incredible disparity of deuterostomes revealed by fossils, genes, and development. Biol Rev Camb Philos Soc 2023; 98:316-351. [PMID: 36257784 DOI: 10.1111/brv.12908] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Revised: 09/23/2022] [Accepted: 09/28/2022] [Indexed: 01/12/2023]
Abstract
Deuterostomes are the major division of animal life which includes sea stars, acorn worms, and humans, among a wide variety of ecologically and morphologically disparate taxa. However, their early evolution is poorly understood, due in part to their disparity, which makes identifying commonalities difficult, as well as their relatively poor early fossil record. Here, we review the available morphological, palaeontological, developmental, and molecular data to establish a framework for exploring the origins of this important and enigmatic group. Recent fossil discoveries strongly support a vermiform ancestor to the group Hemichordata, and a fusiform active swimmer as ancestor to Chordata. The diverse and anatomically bewildering variety of forms among the early echinoderms show evidence of both bilateral and radial symmetry. We consider four characteristics most critical for understanding the form and function of the last common ancestor to Deuterostomia: Hox gene expression patterns, larval morphology, the capacity for biomineralization, and the morphology of the pharyngeal region. We posit a deuterostome last common ancestor with a similar antero-posterior gene regulatory system to that found in modern acorn worms and cephalochordates, a simple planktonic larval form, which was later elaborated in the ambulacrarian lineage, the ability to secrete calcium minerals in a limited fashion, and a pharyngeal respiratory region composed of simple pores. This animal was likely to be motile in adult form, as opposed to the sessile origins that have been historically suggested. Recent debates regarding deuterostome monophyly as well as the wide array of deuterostome-affiliated problematica further suggest the possibility that those features were not only present in the last common ancestor of Deuterostomia, but potentially in the ur-bilaterian. The morphology and development of the early deuterostomes, therefore, underpin some of the most significant questions in the study of metazoan evolution.
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Affiliation(s)
- Karma Nanglu
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA, 02138, USA
| | - Selina R Cole
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, 10th & Constitution Avenue NW, Washington, DC, 20560, USA.,Sam Noble Museum, University of Oklahoma, 2401 Chautauqua Avenue, Norman, OK, 73072, USA.,School of Geosciences, University of Oklahoma, 100 E Boyd Street, Norman, OK, 73019, USA
| | - David F Wright
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, 10th & Constitution Avenue NW, Washington, DC, 20560, USA.,Sam Noble Museum, University of Oklahoma, 2401 Chautauqua Avenue, Norman, OK, 73072, USA.,School of Geosciences, University of Oklahoma, 100 E Boyd Street, Norman, OK, 73019, USA
| | - Camilla Souto
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, 10th & Constitution Avenue NW, Washington, DC, 20560, USA.,School of Natural Sciences & Mathematics, Stockton University, 101 Vera King Farris Dr, Galloway, NJ, 08205, USA
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12
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Morphological Description and Molecular Analysis of Newly Recorded Asteroid, Henricia djakonovi Chichvarkhin, 2017 (Asteroidea: Spinulosida: Echinasteridae), from Dokdo Island, Korea. TAXONOMY 2023. [DOI: 10.3390/taxonomy3010004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
We recently collected the samples of Henricia from adjacent waters of Dokdo Island, Korea, using trimix SCUBA diving. Based on a combined result of morphological and molecular analysis, we identified our specimen as Henricia djakonovi Chichvarkhin, 2017, which is newly recorded in Korea. Morphologically, H. djakonovi has crescent abactinal plates bearing numerous pillar-shaped abactinal spines with a droplet-like apical tip. Moreover, molecular analysis based on the mitochondrial COI gene occurred that clearly distinguished H. djakonovi from other species of Henricia in the pairwise genetic distance and maximum likelihood analysis. Accordingly, 15 species of Henricia are recorded in Korean fauna, including H. djakonovi.
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13
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Ullsten S, Petit GA, Isaksson J, Hansen IKØ, Schneider YKH, Jenssen M, Li C, Hansen KØ. Identification of New Purpuroine Analogues from the Arctic Echinodermata Pteraster militaris That Inhibit FLT3-ITD + AML Cell Lines. Int J Mol Sci 2022; 23:15852. [PMID: 36555494 PMCID: PMC9779817 DOI: 10.3390/ijms232415852] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Revised: 12/01/2022] [Accepted: 12/05/2022] [Indexed: 12/15/2022] Open
Abstract
Isolation of bioactive products from the marine environment is considered a very promising approach to identify new compounds that can be used for further drug development. In this work we have isolated three new compounds from the purpuroine family by mass-guided preparative HPLC; purpuroine K-M. These compounds where screened for antibacterial- and antifungal activity, antibiofilm formation and anti-cell proliferation activity. Additionally, apoptosis-, cell cycle-, kinase binding- and docking studies were performed to evaluate the mechanism-of-action. None of the compounds showed activity in antibacterial-, antibiofilm- or antifungal assays. However, one of the isolated compounds, purpuroine K, showed activity against two cell lines, MV-4-11 and MOLM-13, two AML cell lines both carrying the FTL3-ITD mutation. In MV-4-11 cells, purpuroine K was found to increase apoptosis and arrest cells cycle in G1/G0, which is a common feature of FLT3 inhibitors. Interactions between purpuroine K and the FLT3 wild type or FLT3 ITD mutant proteins could however not be elucidated in our kinase binding and docking studies. In conclusion, we have isolated three novel molecules, purpuroine K-M, one of which (purpuroine K) shows a potent activity against FLT3-ITD mutated AML cell lines, however, the molecular target(s) of purpuroine K still need to be further investigated.
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Affiliation(s)
- Sara Ullsten
- Marbio, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
| | | | - Johan Isaksson
- Department of Chemistry, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
- Department of Pharmacy, Faculty of Health Sciences, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Ida K. Ø. Hansen
- Norwegian College of Fishery Science, Faculty of Biosciences, Fisheries and Economics, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
| | | | - Marte Jenssen
- Marbio, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Chun Li
- Marbio, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Kine Ø. Hansen
- Marbio, UiT—The Arctic University of Norway, N-9037 Tromsø, Norway
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14
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Species composition of sea stars (Echinodermata: Asteroidea) in the Patagonian Argentinian deep sea, including seven new records: connectivity with sub-Antarctic and Antarctic fauna. Polar Biol 2022. [DOI: 10.1007/s00300-022-03056-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
AbstractThe main target of this paper is to improve the knowledge of the species composition of sea stars in Patagonian Argentine deep sea reaching depths of 2062 m. In addition, these results offer us the opportunity to analyze the possible connections between Argentinian marine fauna and adjacent Antarctic areas that have become a topic of interest in the past few years. This work is based on Atlantic Projects’ surveys carried out on an atypical and especially vulnerable marine ecosystems (canyons created from craters collapse by gas leaks). These are profusely impacted by frequent fishing activities, being one of the most important and international fishing grounds, where 887 records (1878 specimens) of 41 species of asteroids were collected in 217 stations ranging from 219 to 2062 m in depth. Seven of those species are proposed as new records: (Diplasterias octoradiata (Studer 1885), Plutonaster bifrons (Wyville Thomson, 1873), Radiaster elegans Perrier, 1881, Anseropoda antarctica Fisher, 1940, Pillsburiaster calvus Mah, 2011, Paralophaster lorioli (Koehler, 1907), Pteraster flabellifer Mortensen 1933). After refining the database built from literature and open-access databases such as OBIS and AntBIF, the new Argentinian asteroids deep-water checklist contains 2198 records from 64 asteroids species including the 7 new records proposed. Most of these 64 species (89.06%) are present in Antarctic-adjacent waters, and after the study of their occurrences at traditional biogeographic entities, our results support the hypothesis that Argentinian waters (in the case of the class Asteroidea) should be considered part of the sub-Antarctic entity.
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15
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Mitogenomics provides new insights into the phylogenetic relationships and evolutionary history of deep-sea sea stars (Asteroidea). Sci Rep 2022; 12:4656. [PMID: 35304532 PMCID: PMC8933410 DOI: 10.1038/s41598-022-08644-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Accepted: 02/25/2022] [Indexed: 12/22/2022] Open
Abstract
The deep sea (> 200 m) is considered as the largest and most remote biome, which characterized by low temperatures, low oxygen level, scarce food, constant darkness, and high hydrostatic pressure. The sea stars (class Asteroidea) are ecologically important and diverse echinoderms in all of the world’s oceans, occurring from the intertidal to the abyssal zone (to about 6000 m). To date, the phylogeny of the sea stars and the relationships of deep-sea and shallow water groups have not yet been fully resolved. Here, we recovered five mitochondrial genomes of deep-sea asteroids. The A+T content of the mtDNA in deep-sea asteroids were significantly higher than that of the shallow-water groups. The gene orders of the five new mitogenomes were identical to that of other asteroids. The phylogenetic analysis showed that the orders Valvatida, Paxillosida, Forcipulatida are paraphyletic. Velatida was the sister order of all the others and then the cladeValvatida-Spinulosida-Paxillosida-Notomyotida versus Forcipulatida-Brisingida. Deep-sea asteroids were nested in different lineages, instead of a well-supported clade. The tropical Western Pacific was suggested as the original area of asteroids, and the temperate water was initially colonized with asteroids by the migration events from the tropical and cold water. The time-calibrated phylogeny showed that Asteroidea originated during Devonian-Carboniferous boundary and the major lineages of Asteroidea originated during Permian–Triassic boundary. The divergence between the deep-sea and shallow-water asteroids coincided approximately with the Triassic-Jurassic extinction. Total 29 positively selected sites were detected in fifteen mitochondrial genes of five deep-sea lineages, implying a link between deep-sea adaption and mitochondrial molecular biology in asteroids.
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16
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First evidence of microplastics in the Marine Protected Area Namuncurá at Burdwood Bank, Argentina: a study on Henricia obesa and Odontaster penicillatus (Echinodermata: Asteroidea). Polar Biol 2021. [DOI: 10.1007/s00300-021-02959-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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17
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Dilman AB, Minin KV, Petrov NB. New record of the wood-associated sea star Caymanostella, with notes on the phylogenetic position of the family Caymanostellidae (Asteroidea). Zool J Linn Soc 2021. [DOI: 10.1093/zoolinnean/zlab060] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
Abstract
In 2016, three specimens of Caymanostella were collected from the Kuril-Kamchatka Trench area at depths of 5101–5134 m. Comparative morphological analysis revealed that the new specimens are similar to Caymanostella spinimarginata, the most geographically distant species (Atlantic Ocean). The new specimens were identified as C. cf. spinimarginata. Multilocus genetic data were obtained for the family Caymanostellidae for the first time in this study. Molecular evidence based on the analyses of three mitochondrial and two nuclear markers recovers the family Caymanostellidae as a sister-taxon to Ophidiasteridae (order Valvatida). Phylogenetic data indicate that morphological features, which were previously used to imply asterinid, xyloplacid or korethrasterid affinities for the family Caymanostellidae, emerged independently. It is suggested that the family Caymanostellidae should be placed within the order Valvatida.
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Affiliation(s)
- Anna B Dilman
- Shirshov Institute of Oceanology, RAS, Nakhimovsky prospekt, 36, 117997, Moscow, Russia
| | - Kirill V Minin
- Shirshov Institute of Oceanology, RAS, Nakhimovsky prospekt, 36, 117997, Moscow, Russia
| | - Nikolay B Petrov
- A. N. Belozersky Research Institute of Physico-Chemical Biology, MSU, Leninskye gory, 1, building 40, 119992, Moscow, Russia
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18
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Quek ZBR, Chang JJM, Ip YCA, Chan YKS, Huang D. Mitogenomes Reveal Alternative Initiation Codons and Lineage-Specific Gene Order Conservation in Echinoderms. Mol Biol Evol 2021; 38:981-985. [PMID: 33027524 PMCID: PMC7947835 DOI: 10.1093/molbev/msaa262] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
The mitochondrial genetic code is much more varied than the standard genetic code. The invertebrate mitochondrial code, for instance, comprises six initiation codons, including five alternative start codons. However, only two initiation codons are known in the echinoderm and flatworm mitochondrial code, the canonical ATG and alternative GTG. Here, we analyzed 23 Asteroidea mitogenomes, including ten newly sequenced species and unambiguously identified at least two other start codons, ATT and ATC, both of which also initiate translation of mitochondrial genes in other invertebrates. These findings underscore the diversity of the genetic code and expand upon the suite of initiation codons among echinoderms to avoid erroneous annotations. Our analyses have also uncovered the remarkable conservation of gene order among asteroids, echinoids, and holothuroids, with only an interchange between two gene positions in asteroids over ∼500 Ma of echinoderm evolution.
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Affiliation(s)
| | - Jia Jin Marc Chang
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Yin Cheong Aden Ip
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Yong Kit Samuel Chan
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Danwei Huang
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore.,Tropical Marine Science Institute, National University of Singapore, Singapore, Singapore
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19
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Turner RL, Graham BD, Miller JE. Mithrodia clavigera (Lamarck, 1816) (Echinodermata: Asteroidea: Mithrodiidae) from the central Atlantic Ocean and Gulf of Mexico. P BIOL SOC WASH 2021. [DOI: 10.2988/20-00009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Richard L. Turner
- (RLT) Department of Ocean Engineering and Marine Sciences, Florida Institute of Technology, 150 West University Boulevard, Melbourne, Florida 32901, U.S.A.,
| | - Bruce D. Graham
- (BDG) CSA Ocean Sciences Inc., 8502 SW Kansas Avenue, Stuart, Florida 34997, U.S.A.,
| | - John E. Miller
- (JEM) 1115 Ansley Avenue SW, Vero Beach, Florida 32968, U.S.A.,
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20
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Yamamoto M, Hiruta SF, Arai M, Shimizu M, Mah CL, Fujita T, Setiamarga DHE. The first complete mitochondrial genome of the Northern Pacific deep-sea goniasterid sea star Ceramaster japonicus (Sladen, 1889) determined using NGS-based shotgun sequencing. Mitochondrial DNA B Resour 2021; 6:1406-1408. [PMID: 33969188 PMCID: PMC8079041 DOI: 10.1080/23802359.2021.1911706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
Affiliation(s)
- Masaki Yamamoto
- Department of Applied Chemistry and Biochemistry, National Institute of Technology (KOSEN), Wakayama College, Wakayama, Japan
| | - Shimpei F. Hiruta
- Division of Marine Invertebrates, National Museum of Nature and Science, Ibaraki, Japan
| | - Mikihito Arai
- Division of Marine Invertebrates, National Museum of Nature and Science, Ibaraki, Japan
- Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | - Moe Shimizu
- Department of Applied Chemistry and Biochemistry, National Institute of Technology (KOSEN), Wakayama College, Wakayama, Japan
| | - Christopher L. Mah
- Department of Invertebrate Zoology, Smithsonian National Museum of Natural History, Washington, DC, USA
| | - Toshihiko Fujita
- Division of Marine Invertebrates, National Museum of Nature and Science, Ibaraki, Japan
- Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | - Davin H. E. Setiamarga
- Department of Applied Chemistry and Biochemistry, National Institute of Technology (KOSEN), Wakayama College, Wakayama, Japan
- The University Museum, The University of Tokyo, Tokyo, Japan
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21
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Plazzi F, Puccio G, Passamonti M. HERMES: An improved method to test mitochondrial genome molecular synapomorphies among clades. Mitochondrion 2021; 58:285-295. [PMID: 33639269 DOI: 10.1016/j.mito.2021.02.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2020] [Revised: 01/10/2021] [Accepted: 02/12/2021] [Indexed: 02/06/2023]
Abstract
Mitochondrial chromosomes have diversified among eukaryotes and many different architectures and features are now acknowledged for this genome. Here we present the improved HERMES index, which can measure and quantify the amount of molecular change experienced by mitochondrial genomes. We test the improved approach with ten molecular phylogenetic studies based on complete mitochondrial genomes, representing six bilaterian Phyla. In most cases, HERMES analysis spotted out clades or single species with peculiar molecular synapomorphies, allowing to identify phylogenetic and ecological patterns. The software presented herein handles linear, circular, and multi-chromosome genomes, thus widening the HERMES scope to the complete eukaryotic domain.
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Affiliation(s)
- Federico Plazzi
- Department of Biological, Geological and Environmental Sciences, University of Bologna, via Selmi, 3, 40126 Bologna, Italy.
| | - Guglielmo Puccio
- Department of Biological, Geological and Environmental Sciences, University of Bologna, via Selmi, 3, 40126 Bologna, Italy.
| | - Marco Passamonti
- Department of Biological, Geological and Environmental Sciences, University of Bologna, via Selmi, 3, 40126 Bologna, Italy.
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22
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Hunter AW, Ortega-Hernández J. A new somasteroid from the Fezouata Lagerstätte in Morocco and the Early Ordovician origin of Asterozoa. Biol Lett 2021; 17:20200809. [PMID: 33465330 PMCID: PMC7876607 DOI: 10.1098/rsbl.2020.0809] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Accepted: 12/21/2020] [Indexed: 11/12/2022] Open
Abstract
The somasteroids are Lower Palaeozoic star-shaped animals widely regarded as ancestors of Asterozoa, the group of echinoderms that includes brittle stars and starfish. However, the origin of asterozoans, the assembly of their distinctive body organization, and their relationships with other Cambrian and Ordovician echinoderms remain problematic owing to the difficulties of comparing the endoskeleton between disparate groups. Here, we describe the new somasteroid Cantabrigiaster fezouataensis, a primitive asterozoan from the Early Ordovician Fezouata Lagerstätte in Morocco. Cantabrigiaster shares with other somasteroids a unique endoskeletal arm organization and the presence of rod-like virgal ossicles that articulate with the ambulacrals, but differs from all other known asterozoans in the absence of adambulacral ossicles defining the arm margins, evoking parallels with non-asterozoan echinoderms. Developmentally informed Bayesian and parsimony phylogenetic analyses, which reflect the homology of the biserial ambulacral ossicles in Palaeozoic echinoderms according to the extraxial-axial theory, recover Cantabrigiaster as the earliest divergent stem-group asterozoan. Our results illuminate the ancestral morphology of Asterozoa, and clarify the affinities of problematic Ordovician Asterozoa. Bayesian inference and parsimony demonstrate that somasteroids represent a paraphyletic grade within stem- and crown-group Asterozoa, whereas stenuroids are paraphyletic within stem-group Ophiuroidea. Our results also offer potential insights on the evolutionary relationships between asterozoans, crinoids and potential Cambrian stem-group representatives.
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Affiliation(s)
- Aaron W. Hunter
- Department of Earth Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EQ, UK
- School of Earth Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6009, Australia
| | - Javier Ortega-Hernández
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK
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23
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Lu YY, Wang MC, Liu K, Zhang W, Liu Y, Tang HF. Two new polyhydroxylated steroidal glycosides from the starfish Culcita novaeguineae. Nat Prod Res 2020; 36:2118-2124. [PMID: 33336584 DOI: 10.1080/14786419.2020.1845676] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
The chemical constituent investigation on the starfish Culcita novaeguineae resulted in the isolation of two new polyhydroxylated steroidal glycosides and two known ones. The new compounds were identified as (25S)-3-O-(2-O-methyl-β-D-xylopyranosyl)-26-O-(β-D-xylopyranosyl)-cholest-4-ene-3β,6β,7α,8,15α,16β,26-heptaol (1) and (25S)-3-O-(2-O-methyl-β-D-xylopyranosyl)-26-O-(β-D-xylopyranosyl)-cholest-4,24(28)-diene-3β,6β,7α,8,15α,16β,26-heptaol (2) and the known compounds were determined as linckosides I and H (3-4). The structures of the isolated compounds were elucidated on the basis of extensive spectroscopic studies and chemical evidence. In addition, the cytotoxicity of the two new compounds against human glioblastoma cell lines U87, U251 and SHG44 was evaluated by MTT method.
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Affiliation(s)
- Yun-Yang Lu
- Department of Chinese Materia Medica and Natural Medicines, School of Pharmacy, Fourth Military Medical University, Xi'an, China
| | - Min-Chang Wang
- Nuclear Magnetic Resonance Center, Xi'an Modern Chemistry Research Institute, Xi'an, China
| | - Ke Liu
- Nuclear Magnetic Resonance Center, Xi'an Modern Chemistry Research Institute, Xi'an, China
| | - Wei Zhang
- Department of Pharmacy, Xijing Hospital, Fourth Military Medical University, Xi'an, China
| | - Yang Liu
- Department of Chinese Materia Medica and Natural Medicines, School of Pharmacy, Fourth Military Medical University, Xi'an, China
| | - Hai-Feng Tang
- Department of Chinese Materia Medica and Natural Medicines, School of Pharmacy, Fourth Military Medical University, Xi'an, China
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24
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Chemical constituents from starfish Culcita novaeguineae. BIOCHEM SYST ECOL 2020. [DOI: 10.1016/j.bse.2020.104164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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25
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Asterosaponins: Structures, Taxonomic Distribution, Biogenesis and Biological Activities. Mar Drugs 2020; 18:md18120584. [PMID: 33255254 PMCID: PMC7760246 DOI: 10.3390/md18120584] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 11/16/2020] [Accepted: 11/16/2020] [Indexed: 12/12/2022] Open
Abstract
Asterosaponins are a class of steroid oligoglycosides isolated from starfish with characteristic structures and diverse biological activities. In this review, we have attempted to combine the most important data concerning asterosaponins and give a list of these secondary metabolites with their structural peculiarities. The purpose of this review is to provide a brief but as complete as possible principal information about their chemical structures, taxonomic distribution in the marine environment, distribution in different geographical areas and depths, some properties, biological activities, and functions. Some other rare steroid metabolites from starfish, closely related in structures and probably biogenesis to asterosaponins, are also discussed.
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26
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Jossart Q, Kochzius M, Danis B, Saucède T, Moreau CVE. Diversity of the Pterasteridae (Asteroidea) in the Southern Ocean: a molecular and morphological approach. Zool J Linn Soc 2020. [DOI: 10.1093/zoolinnean/zlaa097] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Abstract
An integrative approach is crucial in discrimination of species, especially for taxa that are difficult to identify based on morphological characters. In this study, we combine genetics and morphology to assess the diversity of Pterasteridae, a sea star family diversified in deep-sea and polar environments. Because of their derived anatomy and the frequent loss of characters during preservation, Pterasteridae are a suitable case for an integrative study. The molecular identification of 191 specimens (mostly from the Southern Ocean) suggests 26–33 species in three genera (Diplopteraster, Hymenaster and Pteraster), which match the morphological identification in 54–62% of cases. The mismatches are either different molecular units that are morphologically indistinguishable (e.g. Pteraster stellifer units 2 and 4) or, conversely, nominal species that are genetically identical (e.g. Hymenaster coccinatus/densus/praecoquis). Several species are shared between the Northern and Southern Hemispheres (e.g. Pteraster jordani/affinis). In conclusion, the taxonomic status of some groups is confirmed, but for others we find the need to re-evaluate the taxonomy at both genus and species levels. This work significantly increases the DNA barcode library of the Southern Ocean species and merges taxonomic information into an identification key that could become a baseline for future studies (pterasteridae-so.identificationkey.org).
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Affiliation(s)
- Quentin Jossart
- Marine Biology, Ecology and Biodiversity, Vrije Universiteit Brussel (VUB), Brussels, Belgium
| | - Marc Kochzius
- Marine Biology, Ecology and Biodiversity, Vrije Universiteit Brussel (VUB), Brussels, Belgium
| | - Bruno Danis
- Laboratoire de Biologie Marine, Université Libre de Bruxelles (ULB), Brussels, Belgium
| | - Thomas Saucède
- Biogéosciences, Université Bourgogne Franche Comté (UBFC), Dijon, France
| | - Camille V E Moreau
- Laboratoire de Biologie Marine, Université Libre de Bruxelles (ULB), Brussels, Belgium
- Biogéosciences, Université Bourgogne Franche Comté (UBFC), Dijon, France
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27
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An Investigation into the Genetic History of Japanese Populations of Three Starfish, Acanthaster planci, Linckia laevigata, and Asterias amurensis, Based on Complete Mitochondrial DNA Sequences. G3-GENES GENOMES GENETICS 2020; 10:2519-2528. [PMID: 32471940 PMCID: PMC7341131 DOI: 10.1534/g3.120.401155] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Crown-of-thorns starfish, Acanthaster planci (COTS), are common in coral reefs of Indo-Pacific Ocean. Since they are highly fecund predators of corals, periodic outbreaks of COTS cause substantial loss of healthy coral reefs. Using complete mitochondrial DNA sequences, we here examined how COTS outbreaks in the Ryukyu Archipelago, Japan are reflected by the profile of their population genetics. Population genetics of the blue starfish, Linckia laevigata, which lives in the Ryukyu Archipelago, but not break out and the northern Pacific sea star, Asterias amurensis, which lives in colder seawater around the main Islands of Japan, were also examined as controls. Our results showed that As. amurensis has at least two local populations that diverged approximately 4.7 million years ago (MYA), and no genetic exchanges have occurred between the populations since then. Linckia laevigata shows two major populations in the Ryukyu Archipelago that likely diverged ∼6.8 MYA. The two populations, each comprised of individuals collected from coast of the Okinawa Island and those from the Ishigaki Island, suggest the presence of two cryptic species in the Ryukyu Archipelago. On the other hand, population genetics of COTS showed a profile quite different from those of Asterias and Linckia. At least five lineages of COTS have arisen since their divergence ∼0.7 MYA, and each of the lineages is present at the Okinawa Island, Miyako Island, and Ishigaki Island. These results suggest that COTS have experienced repeated genetic bottlenecks that may be associated with or caused by repeated outbreaks.
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28
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Selecting environmental descriptors is critical for modelling the distribution of Antarctic benthic species. Polar Biol 2020. [DOI: 10.1007/s00300-020-02714-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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29
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Lee T, Shin S. Complete mitochondrial genome of Henricia pachyderma (Asteroidea, Spinulosida, Echinasteridae) and phylogenetic analysis. Mitochondrial DNA B Resour 2020. [DOI: 10.1080/23802359.2020.1742231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
Affiliation(s)
- Taekjun Lee
- Marine Biological Resource Institute, Sahmyook University, Seoul, Korea
| | - Sook Shin
- Marine Biological Resource Institute, Sahmyook University, Seoul, Korea
- Department of Animal Biotechnology and Resource, Sahmyook University, Seoul, Korea
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30
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Ruiz-Ramos DV, Schiebelhut LM, Hoff KJ, Wares JP, Dawson MN. An initial comparative genomic autopsy of wasting disease in sea stars. Mol Ecol 2020; 29:1087-1102. [PMID: 32069379 DOI: 10.1111/mec.15386] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2019] [Revised: 01/28/2020] [Accepted: 02/05/2020] [Indexed: 12/18/2022]
Abstract
Beginning in 2013, sea stars throughout the Eastern North Pacific were decimated by wasting disease, also known as "asteroid idiopathic wasting syndrome" (AIWS) due to its elusive aetiology. The geographic extent and taxonomic scale of AIWS meant events leading up to the outbreak were heterogeneous, multifaceted, and oftentimes unobserved; progression from morbidity to death was rapid, leaving few tell-tale symptoms. Here, we take a forensic genomic approach to discover candidate genes that may help explain sea star wasting syndrome. We report the first genome and annotation for Pisaster ochraceus, along with differential gene expression (DGE) analyses in four size classes, three tissue types, and in symptomatic and asymptomatic individuals. We integrate nucleotide polymorphisms associated with survivors of the wasting disease outbreak, DGE associated with temperature treatments in P. ochraceus, and DGE associated with wasting in another asteroid Pycnopodia helianthoides. In P. ochraceus, we found DGE across all tissues, among size classes, and between asymptomatic and symptomatic individuals; the strongest wasting-associated DGE signal was in pyloric caecum. We also found previously identified outlier loci co-occur with differentially expressed genes. In cross-species comparisons of symptomatic and asymptomatic individuals, consistent responses distinguish genes associated with invertebrate innate immunity and chemical defence, consistent with context-dependent stress responses, defensive apoptosis, and tissue degradation. Our analyses thus highlight genomic constituents that may link suspected environmental drivers (elevated temperature) with intrinsic differences among individuals (age/size, alleles associated with susceptibility) that elicit organismal responses (e.g., coelomocyte proliferation) and manifest as sea star wasting mass mortality.
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Affiliation(s)
- Dannise V Ruiz-Ramos
- Department of Life and Environmental Sciences, University of California, Merced, CA, USA
| | - Lauren M Schiebelhut
- Department of Life and Environmental Sciences, University of California, Merced, CA, USA
| | - Katharina J Hoff
- Institute for Computer Science and Mathematics, University of Greifswald, Greifswald, Germany.,Center for Functional Genomics of Microbes, University of Greifswald, Greifswald, Germany
| | - John P Wares
- Department of Genetics and the Odum School of Ecology, University of Georgia, Athens, GA, USA
| | - Michael N Dawson
- Department of Life and Environmental Sciences, University of California, Merced, CA, USA
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31
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Fau M, Villier L. Comparative anatomy and phylogeny of the Forcipulatacea (Echinodermata: Asteroidea): insights from ossicle morphology. Zool J Linn Soc 2019. [DOI: 10.1093/zoolinnean/zlz127] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
A new phylogenetic analysis of the superorder Forcipulatacea is presented. Forcipulatacea is one of the three major groups of sea stars (Asteroidea: Echinodermata), composed of 400 extant species. The sampled taxa are thought to represent the morphological diversity of the group. Twenty-nine forcipulate taxa were sampled belonging to Asteriidae, Stichasteridae, Heliasteridae, Pedicellasteridae, Zoroasteridae and Brisingida. Specimens were dissected with bleach. Detailed description of the skeleton and the anatomy of the ossicles were investigated using scanning electron microscopy. Comparative anatomy allowed the scoring of 115 phylogenetically informative characters. The consensus tree resulting from the analysis recovers Asteriidae, Stichasteridae, Zoroasteridae and Brisingida as monophyletic. All types of morphological features contribute to tree resolution and may be appropriate for taxon diagnosis. The synapomorphies supporting different clades are described and discussed. Brisingida and Zoroasteridae are the best-supported clades. The potentially challenging position of Brisingida in the tree may be explained by homoplastic changes, but also by the presence of numerous non-applicable characters.
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Affiliation(s)
- Marine Fau
- Department of Geosciences, University of Fribourg, Chemin du Musée 6, Fribourg, Switzerland
| | - Loïc Villier
- Centre de Recherche en Paléontologie – Paris, UMR 7207 CNRS – MNHN – Sorbonne Université, Paris, France
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32
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Lazzara V, Arizza V, Luparello C, Mauro M, Vazzana M. Bright Spots in The Darkness of Cancer: A Review of Starfishes-Derived Compounds and Their Anti-Tumor Action. Mar Drugs 2019; 17:E617. [PMID: 31671922 PMCID: PMC6891385 DOI: 10.3390/md17110617] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Revised: 10/24/2019] [Accepted: 10/25/2019] [Indexed: 12/17/2022] Open
Abstract
The fight against cancer represents a great challenge for researchers and, for this reason, the search for new promising drugs to improve cancer treatments has become inevitable. Oceans, due to their wide diversity of marine species and environmental conditions have proven to be precious sources of potential natural drugs with active properties. As an example, in this context several studies performed on sponges, tunicates, mollusks, and soft corals have brought evidence of the interesting biological activities of the molecules derived from these species. Also, echinoderms constitute an important phylum, whose members produce a huge number of compounds with diverse biological activities. In particular, this review is the first attempt to summarize the knowledge about starfishes and their secondary metabolites that exhibited a significant anticancer effect against different human tumor cell lines. For each species of starfish, the extracted molecules, their effects, and mechanisms of action are described.
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Affiliation(s)
- Valentina Lazzara
- Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, 90128 Palermo, Italy.
| | - Vincenzo Arizza
- Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, 90128 Palermo, Italy.
| | - Claudio Luparello
- Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, 90128 Palermo, Italy.
| | - Manuela Mauro
- Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, 90128 Palermo, Italy.
| | - Mirella Vazzana
- Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, 90128 Palermo, Italy.
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33
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Quek ZBR, Chang JJM, Ip YCA, Huang D. Complete mitochondrial genome of the sea star Archaster typicus (Asteroidea: Archasteridae). MITOCHONDRIAL DNA PART B-RESOURCES 2019; 4:3130-3132. [PMID: 33365885 PMCID: PMC7706473 DOI: 10.1080/23802359.2019.1666676] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
The complete mitochondrial genome of the widespread and common Indo-Pacific sea star Archaster typicus has been sequenced in this study. The mitogenome is 16,230 base pairs (bp) in length, with 13 protein coding genes (PCGs), 22 tRNAs and 2 rRNAs. Gene order of its PCGs and rRNAs matches those of nine other asteroid taxa included for comparison in this study, and it has a similar nucleotide composition of 33.08% A, 26.38% T, 25.53% C and 15.01% G nucleotides. Phylogenetic analyses place A. typicus as the sister group to Acanthaster spp., consistent with previous inferences.
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Affiliation(s)
| | - Jia Jin Marc Chang
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Yin Cheong Aden Ip
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Danwei Huang
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore.,Tropical Marine Science Institute, National University of Singapore, Singapore, Singapore
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34
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Lengerer B, Algrain M, Lefevre M, Delroisse J, Hennebert E, Flammang P. Interspecies comparison of sea star adhesive proteins. Philos Trans R Soc Lond B Biol Sci 2019; 374:20190195. [PMID: 31495313 DOI: 10.1098/rstb.2019.0195] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called 'footprints'. In the common sea star species Asterias rubens, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In A. rubens, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species. This article is part of the theme issue 'Transdisciplinary approaches to the study of adhesion and adhesives in biological systems'.
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Affiliation(s)
- Birgit Lengerer
- Biology of Marine Organisms and Biomimetics Unit, Research Institute for Biosciences, University of Mons, 23 Place du Parc, 7000 Mons, Belgium
| | - Morgane Algrain
- Biology of Marine Organisms and Biomimetics Unit, Research Institute for Biosciences, University of Mons, 23 Place du Parc, 7000 Mons, Belgium
| | - Mathilde Lefevre
- Cell Biology Unit, Research Institute for Biosciences, University of Mons, 23 Place du Parc, 7000 Mons, Belgium
| | - Jérôme Delroisse
- Biology of Marine Organisms and Biomimetics Unit, Research Institute for Biosciences, University of Mons, 23 Place du Parc, 7000 Mons, Belgium
| | - Elise Hennebert
- Cell Biology Unit, Research Institute for Biosciences, University of Mons, 23 Place du Parc, 7000 Mons, Belgium
| | - Patrick Flammang
- Biology of Marine Organisms and Biomimetics Unit, Research Institute for Biosciences, University of Mons, 23 Place du Parc, 7000 Mons, Belgium
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35
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Madeira P, Kroh A, Cordeiro R, DE Frias Martins AM, Ávila SP. The Echinoderm Fauna of the Azores (NE Atlantic Ocean). Zootaxa 2019; 4639:zootaxa.4639.1.1. [PMID: 31712455 DOI: 10.11646/zootaxa.4639.1.1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Indexed: 11/04/2022]
Abstract
In more than 150 years of research in the waters surrounding the Azores, several publications on the fauna of echinoderms of the archipelago have been produced, in the form of papers, notes, reports, reviews, and monographs. This work attempts to summarize the present knowledge on this marine group in the Azorean exclusive economic zone (i.e., waters within 200 nautical miles of the archipelago's shores). A short review of the history of the species' taxonomy is given, with key references, geographical distribution, ecology, additional notes and, when possible, figures. We herein report 172 species of echinoderms (6 crinoids, 55 ophiuroids, 45 asteroids, 36 holothurians, and 30 echinoids) from the Azores Archipelago, most of them inhabiting deep waters (>200 m). Only 29 shallow-water species were recorded locally (≤50 m depth). In general, the echinoderm species present in the Azores are characterized by a wide geographical distribution in the Atlantic Ocean. Only nine taxa (all deep-water species, >840 m) appear to be restricted to the Azorean waters. Overall, the knowledge of the echinoderm fauna of the Azores is out-dated, with many species last collected in the archipelago over 100 years ago. A recent interest in the Azorean Mid-Atlantic waters has brought oceanographic cruises back to the archipelago, thus providing new opportunities for the renewal of 150 years of echinoderm studies in the area.
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Affiliation(s)
- Patrícia Madeira
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Pólo dos Açores, Portugal Departamento de Biologia, Faculdade de Ciências e Tecnologia, Universidade dos Açores, Apartado 1422, 9501-801 Ponta Delgada, Açores, Portugal.
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36
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Fau M, Villier L. Post-metamorphic ontogeny of Zoroaster fulgens Thomson, 1873 (Asteroidea, Forcipulatacea). J Anat 2018; 233:644-665. [PMID: 30294788 PMCID: PMC6182998 DOI: 10.1111/joa.12881] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/13/2018] [Indexed: 11/29/2022] Open
Abstract
The complete ontogenetic development of an asteroid skeleton has never been described formally for any species. Here, we describe in detail the post-metamorphic ontogeny of Zoroaster fulgens Thomson, 1873. The major novelty of our work is the description of patterns of plate addition, the ontogeny of the internal ossicles, as well as the variability of ossicles according to their position along series. Seven specimens collected in the Rockall Basin (North Atlantic) were dissected with bleach and their anatomy was documented using a scanning electron microscope. The external anatomy was additionally observed on more than 30 specimens. We found that the overall structure of the skeleton does not change much between juveniles and adults, but the shape of individual ossicle changes during growth. Allometric scaling was particularly visible on the orals, ambulacrals and adambulacrals. The shape of an ossicle is more dependent of its position along the arm series than of its individual size. Many morphological features differentiate progressively during ontogeny, while others are expressed consistently among specimens. The study of this ontogenetic series allows discussing the homology between the structures present on the ossicles of Z. fulgens in particular and other forcipulatacean sea stars in general (i.e. muscles insertions and articulation areas). The new data obtained in this study provide a comprehensive framework of the anatomy and ontogeny of Z. fulgens that will help resolve taxonomic and phylogenetic controversies in the future.
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Affiliation(s)
- Marine Fau
- Department of GeosciencesUniversity of FribourgFribourgSwitzerland
| | - Loïc Villier
- Centre de Recherche sur la Paléobiodiversité et les PaléoenvironnementsSorbonne UniversitéParisFrance
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37
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Mu W, Liu J, Zhang H. The first complete mitochondrial genome of the Mariana Trench Freyastera benthophila (Asteroidea: Brisingida: Brisingidae) allows insights into the deep-sea adaptive evolution of Brisingida. Ecol Evol 2018; 8:10673-10686. [PMID: 30519397 PMCID: PMC6262923 DOI: 10.1002/ece3.4427] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2018] [Revised: 06/27/2018] [Accepted: 07/10/2018] [Indexed: 01/13/2023] Open
Abstract
Starfish (phylum Echinodermata) are ecologically important and diverse members of marine ecosystems in all of the world's oceans, from the shallow water to the hadal zone. The deep sea is recognized as an extremely harsh environment on earth. In this study, we present the mitochondrial genome sequence of Mariana Trench starfish Freyastera benthophila, and this study is the first to explore in detail the mitochondrial genome of a deep-sea member of the order Brisingida. Similar to other starfish, it contained 13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNA genes (duplication of two tRNAs: trnL and trnS). Twenty-two of these genes are encoded on the positive strand, while the other 15 are encoded on the negative strand. The gene arrangement was identical to those of sequenced starfish. Phylogenetic analysis showed the deep-sea Brisingida as a sister taxon to the traditional members of the Asteriidae. Positive selection analysis indicated that five residues (8 N and 16 I in atp8, 47 D and 196 V in nad2, 599 N in nad5) were positively selected sites with high posterior probabilities. Compared these features with shallow sea starfish, we predict that variation specifically in atp8, nad2, and nad5 may play an important role in F. benthophila's adaptation to deep-sea environment.
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Affiliation(s)
- Wendan Mu
- Institute of Deep‐Sea Science and EngineeringChinese Academy of SciencesSanyaChina
- University of Chinese Academy of SciencesBeijingChina
| | - Jun Liu
- Institute of Deep‐Sea Science and EngineeringChinese Academy of SciencesSanyaChina
| | - Haibin Zhang
- Institute of Deep‐Sea Science and EngineeringChinese Academy of SciencesSanyaChina
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38
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Moreau C, Mah C, Agüera A, Améziane N, David Barnes, Crokaert G, Eléaume M, Griffiths H, Charlène Guillaumot, Hemery LG, Jażdżewska A, Quentin Jossart, Vladimir Laptikhovsky, Linse K, Neill K, Sands C, Thomas Saucède, Schiaparelli S, Siciński J, Vasset N, Bruno Danis. Antarctic and Sub-Antarctic Asteroidea database. Zookeys 2018:141-156. [PMID: 29674908 PMCID: PMC5904557 DOI: 10.3897/zookeys.747.22751] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 03/23/2018] [Indexed: 11/24/2022] Open
Abstract
The present dataset is a compilation of georeferenced occurrences of asteroids (Echinodermata: Asteroidea) in the Southern Ocean. Occurrence data south of 45°S latitude were mined from various sources together with information regarding the taxonomy, the sampling source and sampling sites when available. Records from 1872 to 2016 were thoroughly checked to ensure the quality of a dataset that reaches a total of 13,840 occurrences from 4,580 unique sampling events. Information regarding the reproductive strategy (brooders vs. broadcasters) of 63 species is also made available. This dataset represents the most exhaustive occurrence database on Antarctic and Sub-Antarctic asteroids.
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Affiliation(s)
- Camille Moreau
- Marine Biology Lab, CP160/15 Université Libre de Bruxelles (ULB) 50, B-1050 Brussels, Belgium.,UMR CNRS 6282 Biogéosciences, Université de Bourgogne Franche-Comté (UBFC) 6 Boulevard Gabriel, F-21000 Dijon, France
| | - Christopher Mah
- Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, D.C
| | - Antonio Agüera
- Marine Biology Lab, CP160/15 Université Libre de Bruxelles (ULB) 50, B-1050 Brussels, Belgium
| | - Nadia Améziane
- Muséum National d'Histoire Naturelle, Station de Biologie Marine, Place de la Croix, BP 225 9182 Concarneau Cedex
| | - David Barnes
- British Antarctic Survey, High Cross, Madingley Rd, Cambridge CB3 0ET, United Kingdom
| | - Guillaume Crokaert
- Marine Biology Lab, CP160/15 Université Libre de Bruxelles (ULB) 50, B-1050 Brussels, Belgium
| | - Marc Eléaume
- Muséum National d'Histoire Naturelle, Station de Biologie Marine, Place de la Croix, BP 225 9182 Concarneau Cedex.,Muséum National d'Histoire Naturelle, Département Origines, UMR7205 ISYEB MNHN-CNRS-UPMC-EPHE, CP51, 57 rue Cuvier, 75231 Paris Cedex 05, France
| | - Huw Griffiths
- British Antarctic Survey, High Cross, Madingley Rd, Cambridge CB3 0ET, United Kingdom
| | - Charlène Guillaumot
- Marine Biology Lab, CP160/15 Université Libre de Bruxelles (ULB) 50, B-1050 Brussels, Belgium
| | - Lenaïg G Hemery
- Muséum National d'Histoire Naturelle, Département Origines, UMR7205 ISYEB MNHN-CNRS-UPMC-EPHE, CP51, 57 rue Cuvier, 75231 Paris Cedex 05, France
| | - Anna Jażdżewska
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Invertebrate Zoology and Hydrobiology, Laboratory of Polar Biology and Oceanobiology. 12/16 Banacha st., 90-237 Lodz, Poland
| | - Quentin Jossart
- Marine Biology Lab, CP160/15 Université Libre de Bruxelles (ULB) 50, B-1050 Brussels, Belgium.,Marine Biology, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium
| | - Vladimir Laptikhovsky
- Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft NR33 0HT, United Kingdom.,Shallow Marine Surveys Group, P.O. Box 598, Stanley FIQQ 1ZZ, Falkland Islands
| | - Katrin Linse
- British Antarctic Survey, High Cross, Madingley Rd, Cambridge CB3 0ET, United Kingdom
| | - Kate Neill
- National Institute of Water and Atmospheric Research, Coasts and Oceans Centre, 301 Evans Bay Parade, Wellington, New Zealand
| | - Chester Sands
- British Antarctic Survey, High Cross, Madingley Rd, Cambridge CB3 0ET, United Kingdom
| | - Thomas Saucède
- UMR CNRS 6282 Biogéosciences, Université de Bourgogne Franche-Comté (UBFC) 6 Boulevard Gabriel, F-21000 Dijon, France
| | - Stefano Schiaparelli
- Dipartimento di Scienze della Terra, dell'Ambiente e della Vita (DISTAV), Università di Genova, C.so Europa 26, Genova I-16132 Italy
| | - Jacek Siciński
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Invertebrate Zoology and Hydrobiology, Laboratory of Polar Biology and Oceanobiology. 12/16 Banacha st., 90-237 Lodz, Poland
| | - Noémie Vasset
- Muséum National d'Histoire Naturelle, Station de Biologie Marine, Place de la Croix, BP 225 9182 Concarneau Cedex.,Noémie Vasset has been central in compiling all POKER 2 samples, among other things, while she was at the MNHN. She passed away August 22, 2016
| | - Bruno Danis
- Marine Biology Lab, CP160/15 Université Libre de Bruxelles (ULB) 50, B-1050 Brussels, Belgium
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39
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Lu Y, Li H, Wang M, Liu Y, Feng Y, Liu K, Tang H. Cytotoxic Polyhydroxysteroidal Glycosides from Starfish Culcita novaeguineae. Mar Drugs 2018. [PMID: 29534028 PMCID: PMC5867636 DOI: 10.3390/md16030092] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Four new polyhydroxysteroidal glycosides—culcinosides A–D (1, 2, 4, and 7)—along with three known compounds—echinasteroside C (3), linckoside F (5), and linckoside L3 (6)—were isolated from the ethanol extract of starfish Culcita novaeguineae collected from the Xisha Islands of the South China Sea. The structures of new compounds were elucidated through extensive spectroscopic studies and chemical evidence, especially two-dimensional (2D) NMR techniques. The cytotoxicity of the new compounds against human glioblastoma cell lines U87, U251, and SHG44 were evaluated.
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Affiliation(s)
- Yunyang Lu
- Institute of Materia Medica, School of Pharmacy, Fourth Military Medical University, Xi'an 710032, China.
| | - Hu Li
- Institute of Materia Medica, School of Pharmacy, Fourth Military Medical University, Xi'an 710032, China.
- First Motorized Detachment of Shanghai Armed Police Corps, Shanghai 200126, China.
| | - Minchang Wang
- Nuclear Magnetic Resonance Center, Xi'an Modern Chemistry Research Institute, Xi'an 710065, China.
| | - Yang Liu
- Institute of Materia Medica, School of Pharmacy, Fourth Military Medical University, Xi'an 710032, China.
| | - Yingda Feng
- Institute of Materia Medica, School of Pharmacy, Fourth Military Medical University, Xi'an 710032, China.
| | - Ke Liu
- Nuclear Magnetic Resonance Center, Xi'an Modern Chemistry Research Institute, Xi'an 710065, China.
| | - Haifeng Tang
- Institute of Materia Medica, School of Pharmacy, Fourth Military Medical University, Xi'an 710032, China.
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40
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Loeza-Quintana T, Adamowicz SJ. Iterative Calibration: A Novel Approach for Calibrating the Molecular Clock Using Complex Geological Events. J Mol Evol 2018; 86:118-137. [DOI: 10.1007/s00239-018-9831-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2017] [Accepted: 02/02/2018] [Indexed: 01/04/2023]
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41
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Chemical Ecology of Chemosensation in Asteroidea: Insights Towards Management Strategies of Pest Species. J Chem Ecol 2018; 44:147-177. [PMID: 29362949 DOI: 10.1007/s10886-018-0926-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Revised: 12/03/2017] [Accepted: 01/09/2018] [Indexed: 12/11/2022]
Abstract
Within the Phylum Echinodermata, the class Asteroidea, commonly known as starfish and sea stars, encompasses a large number of benthos inhabiting genera and species with various feeding modalities including herbivores, carnivores, omnivores and detritivores. The Asteroidea rely on chemosensation throughout their life histories including hunting prey, avoiding or deterring predators, in the formation of spawning aggregations, synchronizing gamete release and targeting appropriate locations for larval settlement. The identities of many of the chemical stimuli that mediate these physiological and behavioural processes remain unresolved even though evidence indicates they play pivotal roles in the functionality of benthic communities. Aspects of chemosensation, as well as putative chemically-mediated behaviours and the molecular mechanisms of chemoreception, within the Asteroidea are reviewed here, with particular reference to the coral reef pest the Crown-of-Thorns starfish Acanthaster planci species complex, in the context of mitigation of population outbreaks.
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42
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López-Márquez V, Acevedo I, Manjón-Cabeza ME, García-Jiménez R, Templado J, Machordom A. Looking for morphological evidence of cryptic species in Asterina Nardo, 1834 (Echinodermata: Asteroidea). The redescription of Asterina pancerii (Gasco, 1870) and the description of two new species. INVERTEBR SYST 2018. [DOI: 10.1071/is17024] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Three species of the genus Asterina are known to inhabit the Mediterranean Sea and the north-eastern Atlantic Ocean: Asterina gibbosa (Pennant, 1777), A. pancerii (Gasco, 1870) and A. phylactica Emson & Crump, 1979. Differentiation of these species has primarily been based only on subtle characters (some highly debatable), such as colour or size. Therefore, this study aimed to review the morphological data characterising members of the genus, to incorporate new characters that may clarify morphological analyses and to couple morphological data with molecular evidence of differentiation based on the analysis of partial sequences of the cytochromec oxidase subunitI (COI) and 18S rDNA (18S) genes and two anonymous nuclear loci (AgX2 and AgX5). The different lineages and cryptic species identified from the molecular analysis were then morphologically characterised, which was challenging given the limited number of diagnostic characters. Two of the five monophyletic lineages obtained molecularly (COI divergence >4%), further supported by differences in morphological characters and reproductive behaviour, are proposed as new species: Asterina martinbarriosi, sp. nov. from the Canary Islands, Spain (eastern central Atlantic Ocean) and Asterina vicentae, sp. nov. from Tarragona, north-eastern Spain (western Mediterranean Sea).
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43
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Knott KE, Ringvold H, Blicher ME. Morphological and molecular analysis of Henricia Gray, 1840 (Asteroidea: Echinodermata) from the Northern Atlantic Ocean. Zool J Linn Soc 2017. [DOI: 10.1093/zoolinnean/zlx066] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- K Emily Knott
- Department of Biological and Environmental Science, University of Jyvaskyla, Jyvaskyla, Finland
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44
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De novo assembly of a transcriptome from the eggs and early embryos of Astropecten aranciacus. PLoS One 2017; 12:e0184090. [PMID: 28873438 PMCID: PMC5584759 DOI: 10.1371/journal.pone.0184090] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2017] [Accepted: 08/17/2017] [Indexed: 11/19/2022] Open
Abstract
Starfish have been instrumental in many fields of biological and ecological research. Oocytes of Astropecten aranciacus, a common species native to the Mediterranean Sea and the East Atlantic, have long been used as an experimental model to study meiotic maturation, fertilization, intracellular Ca2+ signaling, and cell cycle controls. However, investigation of the underlying molecular mechanisms has often been hampered by the overall lack of DNA or protein sequences for the species. In this study, we have assembled a transcriptome for this species from the oocytes, eggs, zygotes, and early embryos, which are known to have the highest RNA sequence complexity. Annotation of the transcriptome identified over 32,000 transcripts including the ones that encode 13 distinct cyclins and as many cyclin-dependent kinases (CDK), as well as the expected components of intracellular Ca2+ signaling toolkit. Although the mRNAs of cyclin and CDK families did not undergo significant abundance changes through the stages from oocyte to early embryo, as judged by real-time PCR, the transcript encoding Mos, a negative regulator of mitotic cell cycle, was drastically reduced during the period of rapid cleavages. Molecular phylogenetic analysis using the homologous amino acid sequences of cytochrome oxidase subunit I from A. aranciacus and 30 other starfish species indicated that Paxillosida, to which A. aranciacus belongs, is not likely to be the most basal order in Asteroidea. Taken together, the first transcriptome we assembled in this species is expected to enable us to perform comparative studies and to design gene-specific molecular tools with which to tackle long-standing biological questions.
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Linchangco GV, Foltz DW, Reid R, Williams J, Nodzak C, Kerr AM, Miller AK, Hunter R, Wilson NG, Nielsen WJ, Mah CL, Rouse GW, Wray GA, Janies DA. The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics. Mol Phylogenet Evol 2017; 115:161-170. [PMID: 28757447 DOI: 10.1016/j.ympev.2017.07.022] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2017] [Revised: 06/05/2017] [Accepted: 07/25/2017] [Indexed: 11/28/2022]
Abstract
Multi-locus phylogenetic studies of echinoderms based on Sanger and RNA-seq technologies and the fossil record have provided evidence for the Asterozoa-Echinozoa hypothesis. This hypothesis posits a sister relationship between asterozoan classes (Asteroidea and Ophiuroidea) and a similar relationship between echinozoan classes (Echinoidea and Holothuroidea). Despite this consensus around Asterozoa-Echinozoa, phylogenetic relationships within the class Asteroidea (sea stars or starfish) have been controversial for over a century. Open questions include relationships within asteroids and the status of the enigmatic taxon Xyloplax. Xyloplax is thought by some to represent a newly discovered sixth class of echinoderms - and by others to be an asteroid. To address these questions, we applied a novel workflow to a large RNA-seq dataset that encompassed a broad taxonomic and genomic sample. This study included 15 species sampled from all extant orders and 13 families, plus four ophiuroid species as an outgroup. To expand the taxonomic coverage, the study also incorporated five previously published transcriptomes and one previously published expressed sequence tags (EST) dataset. We developed and applied methods that used a range of alignment parameters with increasing permissiveness in terms of gap characters present within an alignment. This procedure facilitated the selection of phylogenomic data subsets from large amounts of transcriptome data. The results included 19 nested data subsets that ranged from 37 to 4,281loci. Tree searches on all data subsets reconstructed Xyloplax as a velatid asteroid rather than a new class. This result implies that asteroid morphology remains labile well beyond the establishment of the body plan of the group. In the phylogenetic tree with the highest average asteroid nodal support several monophyletic groups were recovered. In this tree, Forcipulatida and Velatida are monophyletic and form a clade that includes Brisingida as sister to Forcipulatida. Xyloplax is consistently recovered as sister to Pteraster. Paxillosida and Spinulosida are each monophyletic, with Notomyotida as sister to the Paxillosida. Valvatida is recovered as paraphyletic. The results from other data subsets are largely consistent with these results. Our results support the hypothesis that the earliest divergence event among extant asteroids separated Velatida and Forcipulatacea from Valvatacea and Spinulosida.
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Affiliation(s)
- Gregorio V Linchangco
- Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA.
| | - David W Foltz
- Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA
| | - Rob Reid
- Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA
| | - John Williams
- Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA
| | - Conor Nodzak
- Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA
| | | | | | - Rebecca Hunter
- Department of Biology, Abilene Christian University, Abilene, TX, USA
| | - Nerida G Wilson
- Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA; Western Australian Museum, Locked Bag 49, Welshpool DC, Western Australia 6986, Australia
| | - William J Nielsen
- Department of Biology and Center for Genomic and Computational Biology, Duke University, Durham, NC, USA
| | - Christopher L Mah
- Department of Invertebrate Zoology, Smithsonian Institution, Washington, District of Columbia, USA
| | - Greg W Rouse
- Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA
| | - Gregory A Wray
- Department of Biology and Center for Genomic and Computational Biology, Duke University, Durham, NC, USA
| | - Daniel A Janies
- Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA.
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Blowes LM, Egertová M, Liu Y, Davis GR, Terrill NJ, Gupta HS, Elphick MR. Body wall structure in the starfish Asterias rubens. J Anat 2017; 231:325-341. [PMID: 28714118 PMCID: PMC5554833 DOI: 10.1111/joa.12646] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/25/2017] [Indexed: 12/25/2022] Open
Abstract
The body wall of starfish is composed of magnesium calcite ossicles connected by collagenous tissue and muscles and it exhibits remarkable variability in stiffness, which is attributed to the mechanical mutability of the collagenous component. Using the common European starfish Asterias rubens as an experimental animal, here we have employed a variety of techniques to gain new insights into the structure of the starfish body wall. The structure and organisation of muscular and collagenous components of the body wall were analysed using trichrome staining. The muscle system comprises interossicular muscles as well as muscle strands that connect ossicles with the circular muscle layer of the coelomic lining. The collagenous tissue surrounding the ossicle network contains collagen fibres that form loop-shaped straps that wrap around calcite struts near to the surface of ossicles. The 3D architecture of the calcareous endoskeleton was visualised for the first time using X-ray microtomography, revealing the shapes and interactions of different ossicle types. Furthermore, analysis of the anatomical organisation of the ossicles indicates how changes in body shape may be achieved by local contraction/relaxation of interossicular muscles. Scanning synchrotron small-angle X-ray diffraction (SAXD) scans of the starfish aboral body wall and ambulacrum were used to study the collagenous tissue component at the fibrillar level. Collagen fibrils in aboral body wall were found to exhibit variable degrees of alignment, with high levels of alignment probably corresponding to regions where collagenous tissue is under tension. Collagen fibrils in the ambulacrum had a uniformly low degree of orientation, attributed to macrocrimp of the fibrils and the presence of slanted as well as horizontal fibrils connecting antimeric ambulacral ossicles. Body wall collagen fibril D-period lengths were similar to previously reported mammalian D-periods, but were significantly different between the aboral and ambulacral samples. The overlap/D-period length ratio within fibrils was higher than reported for mammalian tissues. Collectively, the data reported here provide new insights into the anatomy of the body wall in A. rubens and a foundation for further studies investigating the structural basis of the mechanical properties of echinoderm body wall tissue composites.
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Affiliation(s)
- Liisa M Blowes
- School of Biological & Chemical Sciences, Queen Mary University of London, London, UK.,School of Engineering & Materials Science, Queen Mary University of London, London, UK
| | - Michaela Egertová
- School of Biological & Chemical Sciences, Queen Mary University of London, London, UK
| | - Yankai Liu
- School of Engineering & Materials Science, Queen Mary University of London, London, UK
| | - Graham R Davis
- Institute of Dentistry, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, UK
| | | | - Himadri S Gupta
- School of Engineering & Materials Science, Queen Mary University of London, London, UK
| | - Maurice R Elphick
- School of Biological & Chemical Sciences, Queen Mary University of London, London, UK
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Biology of Incidental Catch Sea Star Stellaster childreni Gray, 1840 (Echinodermata: Asteroidea), from Malaysian Borneo Exclusive Economic Zone. ScientificWorldJournal 2017; 2017:1489360. [PMID: 28695188 PMCID: PMC5485481 DOI: 10.1155/2017/1489360] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Revised: 05/07/2017] [Accepted: 05/18/2017] [Indexed: 11/17/2022] Open
Abstract
Sea star (class Asteroidea, phylum Echinodermata) is one of the most successful marine organisms inhabiting a wide range of habitats. As one of the key stone species, sea stars are responsible for maintaining much of the local diversity of species within certain communities. Malaysian Exclusive Economic Zone (EEZ) Resource Survey had been carried out from 16th Aug to 6th Nov 2015 and one of the invertebrate by-catch organisms is sea star Stellaster childreni Gray, 1840. This study documents morphological characters and diet of the sea star, besides providing brief descriptions of the habitats based on particle size analysis and vessel log data sheet. A total of 217 individuals had been examined throughout this study. Fragments of flora and fauna were found in the gut including Mollusca (gastropod, bivalves, and scaphopods), sponge seagrass, and seaweed as well as benthic Foraminifera. Stellaster childreni were found at depth of 45 m to 185 m in the South China Sea off Sarawak Malaysia, with various sea bottom substrata. Approximately 41% of S. childreni were found at a mixture of sandy and muddy substratum, followed by mixture of sandy and coral (19.3%), muddy substratum (17.5%), coral substratum (11.5%), and sandy areas (10.6%). The widely distributed sea star on different types of sea beds suggested healthy deep sea ecosystem; thus Malaysia should explore further potential fisheries resources in the EEZ off Sarawak coast.
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Saito S, Hamanaka G, Kawai N, Furukawa R, Gojobori J, Tominaga M, Kaneko H, Satta Y. Characterization of TRPA channels in the starfish Patiria pectinifera: involvement of thermally activated TRPA1 in thermotaxis in marine planktonic larvae. Sci Rep 2017; 7:2173. [PMID: 28526851 PMCID: PMC5438368 DOI: 10.1038/s41598-017-02171-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2016] [Accepted: 04/12/2017] [Indexed: 11/30/2022] Open
Abstract
The vast majority of marine invertebrates spend their larval period as pelagic plankton and are exposed to various environmental cues. Here we investigated the thermotaxis behaviors of the bipinnaria larvae of the starfish, Patiria pectinifera, in association with TRPA ion channels that serve as thermal receptors in various animal species. Using a newly developed thermotaxis assay system, we observed that P. pectinifera larvae displayed positive thermotaxis toward high temperatures, including toward temperatures high enough to cause death. In parallel, we identified two TRPA genes, termed PpTRPA1 and PpTRPA basal, from this species. We examined the phylogenetic position, spatial expression, and channel properties of each PpTRPA. Our results revealed the following: (1) The two genes diverged early in animal evolution; (2) PpTRPA1 and PpTRPA basal are expressed in the ciliary band and posterior digestive tract of the larval body, respectively; and (3) PpTRPA1 is activated by heat stimulation as well as by known TRPA1 agonists. Moreover, knockdown and rescue experiments demonstrated that PpTRPA1 is involved in positive thermotaxis in P. pectinifera larvae. This is the first report to reveal that TRPA1 channels regulate the behavioral response of a marine invertebrate to temperature changes during its planktonic larval period.
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Affiliation(s)
- Shigeru Saito
- Division of Cell Signaling, Okazaki Institute for Integrative Bioscience (National Institute for Physiological Sciences), National Institute of Natural Sciences, Okazaki, Aichi, 444-8787, Japan.,Department of Physiological Sciences, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, 444-8787, Japan
| | - Gen Hamanaka
- Tateyama Marine Laboratory, Marine and Coastal Research Center, Ochanomizu University, Kouyatsu, Tateyama, Chiba, 294-0301, Japan
| | - Narudo Kawai
- Department of Biology, Research and Education Center for Natural Sciences, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Kanagawa, 223-8521, Japan
| | - Ryohei Furukawa
- Division of Biomedical Information Analysis, Iwate Tohoku Medical Megabank Organization, Iwate Medical University Disaster Reconstruction Center, Nishitokuda, Yahaba-cho, Shiwa-gun, Iwate, 028-3694, Japan
| | - Jun Gojobori
- Department of Evolutionary Studies of Biosystems, School of Advanced Sciences, SOKENDAI (The Graduate University for Advanced Studies), Hayama, Kanagawa, 240-0193, Japan
| | - Makoto Tominaga
- Division of Cell Signaling, Okazaki Institute for Integrative Bioscience (National Institute for Physiological Sciences), National Institute of Natural Sciences, Okazaki, Aichi, 444-8787, Japan.,Department of Physiological Sciences, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, 444-8787, Japan
| | - Hiroyuki Kaneko
- Department of Biology, Research and Education Center for Natural Sciences, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Kanagawa, 223-8521, Japan.
| | - Yoko Satta
- Department of Evolutionary Studies of Biosystems, School of Advanced Sciences, SOKENDAI (The Graduate University for Advanced Studies), Hayama, Kanagawa, 240-0193, Japan.
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Montgomery EM, Hamel JF, Mercier A. Patterns and Drivers of Egg Pigment Intensity and Colour Diversity in the Ocean: A Meta-Analysis of Phylum Echinodermata. ADVANCES IN MARINE BIOLOGY 2016; 76:41-104. [PMID: 28065296 DOI: 10.1016/bs.amb.2016.10.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Egg pigmentation is proposed to serve numerous ecological, physiological, and adaptive functions in egg-laying animals. Despite the predominance and taxonomic diversity of egg layers, syntheses reviewing the putative functions and drivers of egg pigmentation have been relatively narrow in scope, centring almost exclusively on birds. Nonvertebrate and aquatic species are essentially overlooked, yet many of them produce maternally provisioned eggs in strikingly varied colours, from pale yellow to bright red or green. We explore the ways in which these colour patterns correlate with behavioural, morphological, geographic and phylogenetic variables in extant classes of Echinodermata, a phylum that has close phylogenetic ties with chordates and representatives in nearly all marine environments. Results of multivariate analyses show that intensely pigmented eggs are characteristic of pelagic or external development whereas pale eggs are commonly brooded internally. Of the five egg colours catalogued, orange and yellow are the most common. Yellow eggs are a primitive character, associated with all types of development (predominant in internal brooders), whereas green eggs are always pelagic, occur in the most derived orders of each class and are restricted to the Indo-Pacific Ocean. Orange eggs are geographically ubiquitous and may represent a 'universal' egg pigment that functions well under a diversity of environmental conditions. Finally, green occurs chiefly in the classes Holothuroidea and Ophiuroidea, orange in Asteroidea, yellow in Echinoidea, and brown in Holothuroidea. By examining an unprecedented combination of egg colours/intensities and reproductive strategies, this phylum-wide study sheds new light on the role and drivers of egg pigmentation, drawing parallels with theories developed from the study of more derived vertebrate taxa. The primary use of pigments (of any colour) to protect externally developing eggs from oxidative damage and predation is supported by the comparatively pale colour of equally large, internally brooded eggs. Secondarily, geographic location drives the evolution of egg colour diversity, presumably through the selection of better-adapted, more costly pigments in response to ecological pressure.
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Affiliation(s)
| | - J-F Hamel
- Society for Exploration and Valuing of the Environment (SEVE), Portugal Cove-St. Phillips, NL, Canada
| | - A Mercier
- Memorial University, St. John's, NL, Canada
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