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Shaver DJ, Gredzens C, Walker JS, Godard-Codding CAJ, Yacabucci JE, Frey A, Dutton PH, Schmitt CJ. Embryo deformities and nesting trends in Kemp’s ridley sea turtles Lepidochelys kempii before and after the Deepwater Horizon oil spill. ENDANGER SPECIES RES 2021. [DOI: 10.3354/esr01107] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Kemp’s ridley sea turtles Lepidochelys kempii were disproportionately affected by the Deepwater Horizon (DWH) oil spill, which began on 20 April 2010. Embryo deformities were documented in inviable L. kempii eggs before (2008-2010) and after (2011-2013) the DWH spill in 2 Texas (USA) nesting areas (Upper Texas Coast and Padre Island National Seashore). Additional nesting trends, including clutch size and hatching success, were also investigated. Total and late-stage embryo deformity prevalence were 1.5 times greater after 2010 than before, but low in all nesting seasons (mean ± SD: 0.7 ± 8.5% total; 0.6 ± 8.0% late-stage) and did not differ between locations. Craniofacial and carapace deformities were the most frequently observed deformity types. Documented nests in both areas declined in 2010 relative to previous years, ending an exponential increase observed beginning in 1995. Clutch size remained consistent before and after the spill. Hatching success averaged 87.0 ± 33.3% in all years, but no effects from DWH were determined. Collectively, these data represent useful benchmarks against which to judge impacts of future crude oil spills and other catastrophic events.
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Affiliation(s)
- DJ Shaver
- National Park Service, Padre Island National Seashore, Corpus Christi, TX 78480, USA
| | - C Gredzens
- National Park Service, Padre Island National Seashore, Corpus Christi, TX 78480, USA
| | - JS Walker
- National Park Service, Padre Island National Seashore, Corpus Christi, TX 78480, USA
| | - CAJ Godard-Codding
- The Institute of Environmental and Human Health, Texas Tech University, Lubbock, TX 79409, USA
| | - JE Yacabucci
- The Institute of Environmental and Human Health, Texas Tech University, Lubbock, TX 79409, USA
| | - A Frey
- NOAA Fisheries, Southwest Fisheries Science Center, La Jolla, CA 92037, USA
| | - PH Dutton
- NOAA Fisheries, Southwest Fisheries Science Center, La Jolla, CA 92037, USA
| | - CJ Schmitt
- US Geological Survey, Columbia Environmental Research Center, Columbia, MO 65201, USA
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2
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King MD, Elliott JE, Williams TD. Effects of petroleum exposure on birds: A review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 755:142834. [PMID: 33109373 DOI: 10.1016/j.scitotenv.2020.142834] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Revised: 09/14/2020] [Accepted: 10/02/2020] [Indexed: 06/11/2023]
Abstract
Birds are vulnerable to petroleum pollution, and exposure has a range of negative effects resulting from plumage fouling, systemic toxicity, and embryotoxicity. Recent research has not been synthesized since Leighton's 1993 review despite the continued discharge of conventional petroleum, including high-volume oil spills and chronic oil pollution, as well as the emergence of understudied unconventional crude oil types. To address this, we reviewed the individual-level effects of crude oil and refined fuel exposure in avifauna with peer-reviewed articles published 1993-2020 to provide a critical synthesis of the state of the science. We also sought to answer how unconventional crude petroleum effects compare with conventional crude oil. Relevant knowledge gaps and research challenges were identified. The resulting review examines avian exposure to petroleum and synthesizes advances regarding the physical effects of oil hydrocarbons on feather structure and function, as well the toxic effects of inhaled or ingested oil, embryotoxicity, and how exposure affects broader scale endpoints related to behavior, reproduction, and survival. Another outcome of the review was the knowledge gaps and challenges identified. The first finding was a paucity of oil ingestion rate estimates in birds. Characterizing environmentally realistic exposure and ingestion rates is a higher research priority than additional conventional oral dosing experiments. Second, there is an absence of toxicity data for unconventional crude petroleum. Although the effects of air and water contamination in the Canadian oil sands region have received attention, toxicity data for direct exposure to unrefined bitumen produced there in high volumes and other such unconventional oil types are needed. Third, we encountered barriers to the interpretation, replication, broad relevance, and comparability of studies. We therefore propose best practices and promising technological advancements for researchers. This review consolidates our understanding of petroleum's effects on birds and points a way forward for researchers and resource managers.
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Affiliation(s)
- Mason D King
- Simon Fraser University, Department of Biological Sciences, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
| | - John E Elliott
- Simon Fraser University, Department of Biological Sciences, 8888 University Drive, Burnaby, BC V5A 1S6, Canada; Environment and Climate Change Canada, Science and Technology Division, 5421 Robertson Road, Delta, BC V4K 3N2, Canada.
| | - Tony D Williams
- Simon Fraser University, Department of Biological Sciences, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
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3
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Albertos S, Berenguer NI, Sánchez-Virosta P, Gómez-Ramírez P, Jiménez P, Torres-Chaparro MY, Valverde I, Navas I, María-Mojica P, García-Fernández AJ, Espín S. Mercury Exposure in Birds Linked to Marine Ecosystems in the Western Mediterranean. ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2020; 79:435-453. [PMID: 33106911 DOI: 10.1007/s00244-020-00768-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Accepted: 10/03/2020] [Indexed: 06/11/2023]
Abstract
Mercury (Hg), particularly as methylmercury (MeHg), is a nonessential, persistent, and bioaccumulative toxic element with high biomagnification capacity and is considered a threat to marine environments. We evaluated total Hg concentrations in liver, kidney, and brain in 62 individuals of 9 bird species linked to marine ecosystems from western Mediterranean admitted in a Wildlife Rehabilitation Center (WRC) (Alicante, Spain, 2005-2020). Age- and sex-related differences in Hg levels, as well as the cause of admission to the WRC, were also evaluated in certain species. The species studied were: northern gannet (Morus bassanus), European shag (Phalacrocorax aristotelis), great cormorant (Phalacrocorax carbo), osprey (Pandion haliaetus), Balearic shearwater (Puffinus mauretanicus), yellow-legged gull (Larus michahellis), razorbill (Alca torda), common tern (Sterna hirundo), and black-headed gull (Chroicocephalus ridibundus). Concentrations in feathers of 27 individuals, and concentrations in internal tissues in 7 other individuals of 7 different species were also reported but not statistically evaluated due to the limited number of samples. Results suggest that individuals were chronically exposed to Hg through diet. The differences in Hg concentrations among species may be explained by their diet habits. Mercury concentrations strongly correlated between tissues (r = 0.78-0.94, p < 0.001, n = 61-62). Some individuals of certain species (i.e., European shag, northern gannet, and great cormorant) showed Hg concentrations close to or above those described in the literature as causing reproductive alterations in other avian species. Consequently, certain individuals inhabiting western Mediterranean could be at risk of suffering long-term, Hg-related effects. Some of the species evaluated are listed within different categories of threat according to the International Union for Conservation of Nature (IUCN) and are endangered at a national level, so this study will provide valuable information for assessors and authorities in charge of the management of the environment and pollution.
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Affiliation(s)
- Silvia Albertos
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Neus I Berenguer
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Pablo Sánchez-Virosta
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Pilar Gómez-Ramírez
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
- Toxicology and Risk Assessment Group, IMIB-Arrixaca, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Pedro Jiménez
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - María Y Torres-Chaparro
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Irene Valverde
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Isabel Navas
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
- Toxicology and Risk Assessment Group, IMIB-Arrixaca, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain
| | - Pedro María-Mojica
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain.
- "Santa Faz" Wildlife Rehabilitation Center, Consellería de Agricultura, Medio Ambiente, Cambio Climático y Desarrollo Rural, Alicante, Generalitat Valenciana, Spain.
| | - Antonio J García-Fernández
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain.
- Toxicology and Risk Assessment Group, IMIB-Arrixaca, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain.
| | - Silvia Espín
- Department of Socio-Sanitary Sciences, Faculty of Veterinary, Area of Toxicology, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain.
- Toxicology and Risk Assessment Group, IMIB-Arrixaca, University of Murcia, Campus de Espinardo, 30100, Murcia, Spain.
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4
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Peng C, Tang Y, Yang H, He Y, Liu Y, Liu D, Qian Y, Lu L. Time- and compound-dependent microbial community compositions and oil hydrocarbon degrading activities in seawater near the Chinese Zhoushan Archipelago. MARINE POLLUTION BULLETIN 2020; 152:110907. [PMID: 31957682 DOI: 10.1016/j.marpolbul.2020.110907] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Revised: 01/03/2020] [Accepted: 01/10/2020] [Indexed: 06/10/2023]
Abstract
Marine microorganisms play an irreplaceable role in removing spilled oil. Zhoushan archipelago has one of the busiest ports and oil stockpiles in China. However, little is known about which and how fast oil-degrading microorganisms could biodegrade spilled oil here. By combining 14C-/3H-based radiotracer assays and MiSeq sequencing, we report the successive pattern of microbial oil-degrading activities and community compositions. The biodegradation rates of alkanes and PAHs (Polycyclic Aromatic Hydrocarbons) were significantly stimulated by oil addition, and reached their maximum after incubation for 3 and 7 days, respectively. Meanwhile, the abundances of alkB and phnAc genes increased and the bacterial communities continuously shifted. Potential oil-degrading bacteria Alcanivorax, Erythrobacter were the dominant degraders by day 3, whereas the dominant degraders shifted to C1-B045, Alteromonas, Pseudohongiella in the later period. These results provide valuable insights into the cooperative system of the versatile oil-degrading bacteria in successively biodegrading complex oil hydrocarbons in oil spills.
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Affiliation(s)
- Chao Peng
- College of Life Sciences, China West Normal University, Nanchong 637002, China; Chemical Synthesis and Pollution Control Key Laboratory of Sichuan Province, College of Chemistry and Chemical Engineering, China West Normal University, Nanchong 637002, China
| | - Yun Tang
- College of Life Sciences, China West Normal University, Nanchong 637002, China.
| | - Hong Yang
- College of Life Sciences, China West Normal University, Nanchong 637002, China
| | - Yan He
- College of Life Sciences, China West Normal University, Nanchong 637002, China
| | - Yan Liu
- College of Environmental Science and Engineering, China West Normal University, Nanchong 637009, China
| | - Dan Liu
- College of Life Sciences, China West Normal University, Nanchong 637002, China
| | - Yongming Qian
- College of Environmental Science and Engineering, China West Normal University, Nanchong 637009, China
| | - Lu Lu
- College of Environmental Science and Engineering, China West Normal University, Nanchong 637009, China..
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5
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Varrella S, Tangherlini M, Corinaldesi C. Deep Hypersaline Anoxic Basins as Untapped Reservoir of Polyextremophilic Prokaryotes of Biotechnological Interest. Mar Drugs 2020; 18:md18020091. [PMID: 32019162 PMCID: PMC7074082 DOI: 10.3390/md18020091] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Revised: 01/27/2020] [Accepted: 01/28/2020] [Indexed: 12/18/2022] Open
Abstract
Deep-sea hypersaline anoxic basins (DHABs) are considered to be among the most extreme ecosystems on our planet, allowing only the life of polyextremophilic organisms. DHABs’ prokaryotes exhibit extraordinary metabolic capabilities, representing a hot topic for microbiologists and biotechnologists. These are a source of enzymes and new secondary metabolites with valuable applications in different biotechnological fields. Here, we review the current knowledge on prokaryotic diversity in DHABs, highlighting the biotechnological applications of identified taxa and isolated species. The discovery of new species and molecules from these ecosystems is expanding our understanding of life limits and is expected to have a strong impact on biotechnological applications.
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Affiliation(s)
- Stefano Varrella
- Department of Materials, Environmental Sciences and Urban Planning, Polytechnic University of Marche, 60131 Ancona, Italy;
| | | | - Cinzia Corinaldesi
- Department of Materials, Environmental Sciences and Urban Planning, Polytechnic University of Marche, 60131 Ancona, Italy;
- Correspondence:
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6
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Liu X, Jung D, Zhou K, Lee S, Noh K, Khim JS, Giesy JP, Yim UH, Shim WJ, Choi K. Characterization of endocrine disruption potentials of coastal sediments of Taean, Korea employing H295R and MVLN assays-Reconnaissance at 5years after Hebei Spirit oil spill. MARINE POLLUTION BULLETIN 2018; 127:264-272. [PMID: 29475662 DOI: 10.1016/j.marpolbul.2017.11.055] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2017] [Revised: 11/19/2017] [Accepted: 11/23/2017] [Indexed: 06/08/2023]
Abstract
Endocrine disrupting potentials were assessed for sediment samples collected near Hebei Spirit oil spill (HSOS) site, between December 2007 and January 2012. For comparison, major crude oil (CO) of HSOS, or its weathered form were assessed. Both raw extracts (REs) and their fractionated samples were tested using H295R and MVLNluc bioassays. In H295R cells, REs of crude and weathered oil (WO), and nine of 14 sediments significantly increased E2 levels, which were correlated with the concentrations of PAHs. Steroidogenic disruption potentials of the sediments generally decreased over time. Among silica fractions of all REs, aromatic hydrocarbons (F2) and polar compounds (F3) caused greater E2 levels. While, in MVLN cell bioassay, only three of 14 sediment REs showed estrogen receptor binding potencies, and no temporal trend was observed. In conclusion, oil spill can cause endocrine disruption in the affected ecosystem through steroidogenic alteration for years, and such potencies attenuate over time.
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Affiliation(s)
- Xiaoshan Liu
- Dongguan Key Laboratory of Environmental Medicine, School of Public Health, Guangdong Medical University, Guangdong, China
| | - Dawoon Jung
- School of Public Health & Institute of Health and Environment, Seoul National University, Seoul, Republic of Korea; Korea Environment Institute, Sejong, Republic of Korea
| | - Kairu Zhou
- Dongguan Key Laboratory of Environmental Medicine, School of Public Health, Guangdong Medical University, Guangdong, China
| | - Sangwoo Lee
- School of Public Health & Institute of Health and Environment, Seoul National University, Seoul, Republic of Korea; Korea Institute of Toxicology, Daejeon, Republic of Korea
| | - Kiwan Noh
- School of Public Health & Institute of Health and Environment, Seoul National University, Seoul, Republic of Korea
| | - Jong Seong Khim
- School of Earth and Environmental Sciences & Research Institute of Oceanography, Seoul National University, Seoul, Republic of Korea
| | - John P Giesy
- Department of Veterinary Biomedical Sciences & Toxicology Centre, University of Saskatchewan, Saskatoon, SK, Canada
| | - Un Hyuk Yim
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology (KIOST), Geoje, Republic of Korea
| | - Won Joon Shim
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology (KIOST), Geoje, Republic of Korea
| | - Kyungho Choi
- School of Public Health & Institute of Health and Environment, Seoul National University, Seoul, Republic of Korea.
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7
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Huang RM, Bass OL, Pimm SL. Sooty tern ( Onychoprion fuscatus) survival, oil spills, shrimp fisheries, and hurricanes. PeerJ 2017; 5:e3287. [PMID: 28503374 PMCID: PMC5428334 DOI: 10.7717/peerj.3287] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2016] [Accepted: 04/08/2017] [Indexed: 11/30/2022] Open
Abstract
Migratory seabirds face threats from climate change and a variety of anthropogenic disturbances. Although most seabird research has focused on the ecology of individuals at the colony, technological advances now allow researchers to track seabird movements at sea and during migration. We combined telemetry data on Onychoprion fuscatus (sooty terns) with a long-term capture-mark-recapture dataset from the Dry Tortugas National Park to map the movements at sea for this species, calculate estimates of mortality, and investigate the impact of hurricanes on a migratory seabird. Included in the latter analysis is information on the locations of recovered bands from deceased individuals wrecked by tropical storms. We present the first known map of sooty tern migration in the Atlantic Ocean. Our results indicate that the birds had minor overlaps with areas affected by the major 2010 oil spill and a major shrimp fishery. Indices of hurricane strength and occurrence are positively correlated with annual mortality and indices of numbers of wrecked birds. As climate change may lead to an increase in severity and frequency of major hurricanes, this may pose a long-term problem for this colony.
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Affiliation(s)
- Ryan M Huang
- Nicholas School of the Environment, Duke University, Durham, NC, United States of America
| | - Oron L Bass
- South Florida Natural Resources Center, Everglades National Park, Homestead, FL, United States of America
| | - Stuart L Pimm
- Nicholas School of the Environment, Duke University, Durham, NC, United States of America
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8
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Reich KJ, López-Castro MC, Shaver DJ, Iseton C, Hart KM, Hooper MJ, Schmitt CJ. δ13C and δ15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill. ENDANGER SPECIES RES 2017. [DOI: 10.3354/esr00819] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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9
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Krüger L, Ramos JA, Xavier JC, Grémillet D, González-Solís J, Kolbeinsson Y, Militão T, Navarro J, Petry MV, Phillips RA, Ramírez I, Reyes-González JM, Ryan PG, Sigurðsson IA, Van Sebille E, Wanless RM, Paiva VH. Identification of candidate pelagic marine protected areas through a seabird seasonal-, multispecific- and extinction risk-based approach. Anim Conserv 2017. [DOI: 10.1111/acv.12339] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- L. Krüger
- MARE - Marine and Environmental Science Centre; Department of Life Sciences; University of Coimbra; Coimbra Portugal
- Instituto Nacional de Ciência e Tecnologia Antártico de Pesquisas Ambientais INCT-APA; Rio de Janeiro Brasil
| | - J. A. Ramos
- MARE - Marine and Environmental Science Centre; Department of Life Sciences; University of Coimbra; Coimbra Portugal
| | - J. C. Xavier
- MARE - Marine and Environmental Science Centre; Department of Life Sciences; University of Coimbra; Coimbra Portugal
- British Antarctic Survey; Natural Environment Research Council; Cambridge UK
| | - D. Grémillet
- Centre d'Ecologie Fonctionnelle et Evolutive; UMR 5175; CNRS - Université de Montpellier - Université Paul-Valéry Montpellier - EPHE; Montpellier France
- Percy FitzPatrick Institute of African Ornithology; DST-NRF Centre of Excellence; University of Cape Town; Rondebosch South Africa
| | - J. González-Solís
- Department of Animal Biology and Biodiversity Research Institute (IRBio); Faculty of Biology; University of Barcelona; Barcelona Spain
| | - Y. Kolbeinsson
- Northeast Iceland Nature Research Centre; Húsavík Iceland
| | - T. Militão
- Department of Animal Biology and Biodiversity Research Institute (IRBio); Faculty of Biology; University of Barcelona; Barcelona Spain
| | - J. Navarro
- Centre d'Ecologie Fonctionnelle et Evolutive; UMR 5175; CNRS - Université de Montpellier - Université Paul-Valéry Montpellier - EPHE; Montpellier France
- Conservation Biology Department; Estación Biológica de Doñana; Sevilla Spain
| | - M. V. Petry
- Instituto Nacional de Ciência e Tecnologia Antártico de Pesquisas Ambientais INCT-APA; Rio de Janeiro Brasil
- Laboratório de Ornitologia e Animais Marinhos; Universidade do Vale do Rio dos Sinos; São Leopoldo Brasil
| | - R. A. Phillips
- British Antarctic Survey; Natural Environment Research Council; Cambridge UK
| | - I. Ramírez
- Head of Conservation for Europe and Central Asia; Birdlife International; Cambridge UK
| | - J. M. Reyes-González
- Department of Animal Biology and Biodiversity Research Institute (IRBio); Faculty of Biology; University of Barcelona; Barcelona Spain
| | - P. G. Ryan
- Percy FitzPatrick Institute of African Ornithology; DST-NRF Centre of Excellence; University of Cape Town; Rondebosch South Africa
| | | | - E. Van Sebille
- Grantham Institute & Department of Physics; Imperial College London; London UK
| | - R. M. Wanless
- Percy FitzPatrick Institute of African Ornithology; DST-NRF Centre of Excellence; University of Cape Town; Rondebosch South Africa
- Seabird Conservation Programme; BirdLife South Africa; Johannesburg South Africa
| | - V. H. Paiva
- MARE - Marine and Environmental Science Centre; Department of Life Sciences; University of Coimbra; Coimbra Portugal
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10
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Coelho FJRC, Cleary DFR, Costa R, Ferreira M, Polónia ARM, Silva AMS, Simões MMQ, Oliveira V, Gomes NCM. Multitaxon activity profiling reveals differential microbial response to reduced seawater pH and oil pollution. Mol Ecol 2016; 25:4645-59. [DOI: 10.1111/mec.13779] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Revised: 07/25/2016] [Indexed: 12/25/2022]
Affiliation(s)
| | - Daniel F. R. Cleary
- Department of Biology & CESAM; University of Aveiro; Campus de Santiago 3810-193 Aveiro Portugal
| | - Rodrigo Costa
- Centre of Marine Sciences (CCMAR); University of Algarve; Faro 8005-139 Algarve Portugal
- Institute for Bioengineering and Biosciences; Department of Bioengineering; Instituto Superior Técnico; Universidade de Lisboa; 1049-001 Lisbon Portugal
| | - Marina Ferreira
- Department of Biology & CESAM; University of Aveiro; Campus de Santiago 3810-193 Aveiro Portugal
| | - Ana R. M. Polónia
- Department of Biology & CESAM; University of Aveiro; Campus de Santiago 3810-193 Aveiro Portugal
| | - Artur M. S. Silva
- Department of Chemistry & QOPNA; University of Aveiro; Campus Universitário de Santiago Aveiro Portugal
| | - Mário M. Q. Simões
- Department of Chemistry & QOPNA; University of Aveiro; Campus Universitário de Santiago Aveiro Portugal
| | - Vanessa Oliveira
- Department of Biology & CESAM; University of Aveiro; Campus de Santiago 3810-193 Aveiro Portugal
| | - Newton C. M. Gomes
- Department of Biology & CESAM; University of Aveiro; Campus de Santiago 3810-193 Aveiro Portugal
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11
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Daghio M, Vaiopoulou E, Patil SA, Suárez-Suárez A, Head IM, Franzetti A, Rabaey K. Anodes Stimulate Anaerobic Toluene Degradation via Sulfur Cycling in Marine Sediments. Appl Environ Microbiol 2016; 82:297-307. [PMID: 26497463 PMCID: PMC4702649 DOI: 10.1128/aem.02250-15] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2015] [Accepted: 10/17/2015] [Indexed: 11/20/2022] Open
Abstract
Hydrocarbons released during oil spills are persistent in marine sediments due to the absence of suitable electron acceptors below the oxic zone. Here, we investigated an alternative bioremediation strategy to remove toluene, a model monoaromatic hydrocarbon, using a bioanode. Bioelectrochemical reactors were inoculated with sediment collected from a hydrocarbon-contaminated marine site, and anodes were polarized at 0 mV and +300 mV (versus an Ag/AgCl [3 M KCl] reference electrode). The degradation of toluene was directly linked to current generation of up to 301 mA m(-2) and 431 mA m(-2) for the bioanodes polarized at 0 mV and +300 mV, respectively. Peak currents decreased over time even after periodic spiking with toluene. The monitoring of sulfate concentrations during bioelectrochemical experiments suggested that sulfur metabolism was involved in toluene degradation at bioanodes. 16S rRNA gene-based Illumina sequencing of the bulk anolyte and anode samples revealed enrichment with electrocatalytically active microorganisms, toluene degraders, and sulfate-reducing microorganisms. Quantitative PCR targeting the α-subunit of the dissimilatory sulfite reductase (encoded by dsrA) and the α-subunit of the benzylsuccinate synthase (encoded by bssA) confirmed these findings. In particular, members of the family Desulfobulbaceae were enriched concomitantly with current production and toluene degradation. Based on these observations, we propose two mechanisms for bioelectrochemical toluene degradation: (i) direct electron transfer to the anode and/or (ii) sulfide-mediated electron transfer.
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Affiliation(s)
- Matteo Daghio
- Laboratory of Microbial Ecology and Technology, Ghent University, Ghent, Belgium Department of Earth and Environmental Sciences, University of Milano-Bicocca, Milan, Italy
| | - Eleni Vaiopoulou
- Laboratory of Microbial Ecology and Technology, Ghent University, Ghent, Belgium
| | - Sunil A Patil
- Laboratory of Microbial Ecology and Technology, Ghent University, Ghent, Belgium
| | - Ana Suárez-Suárez
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Ian M Head
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Andrea Franzetti
- Department of Earth and Environmental Sciences, University of Milano-Bicocca, Milan, Italy
| | - Korneel Rabaey
- Laboratory of Microbial Ecology and Technology, Ghent University, Ghent, Belgium
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12
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Catania V, Santisi S, Signa G, Vizzini S, Mazzola A, Cappello S, Yakimov MM, Quatrini P. Intrinsic bioremediation potential of a chronically polluted marine coastal area. MARINE POLLUTION BULLETIN 2015; 99:138-149. [PMID: 26248825 DOI: 10.1016/j.marpolbul.2015.07.042] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2015] [Accepted: 07/18/2015] [Indexed: 06/04/2023]
Abstract
A microbiological survey of the Priolo Bay (eastern coast of Sicily, Ionian Sea), a chronically polluted marine coastal area, was carried out in order to discern its intrinsic bioremediation potential. Microbiological analysis, 16S rDNA-based DGGE fingerprinting and PLFAs analysis were performed on seawater and sediment samples from six stations on two transects. Higher diversity and variability among stations was detected by DGGE in sediment than in water samples although seawater revealed higher diversity of culturable hydrocarbon-degrading bacteria. The most polluted sediment hosted higher total bacterial diversity and higher abundance and diversity of culturable HC degraders. Alkane- and PAH-degrading bacteria were isolated from all stations and assigned to Alcanivorax, Marinobacter, Thalassospira, Alteromonas and Oleibacter (first isolation from the Mediterranean area). High total microbial diversity associated to a large selection of HC degraders is believed to contribute to natural attenuation of the area, provided that new contaminant contributions are avoided.
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Affiliation(s)
- Valentina Catania
- Dept. of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, Viale delle Scienze, blg. 16, 90128 Palermo, Italy
| | - Santina Santisi
- Institute for Coastal Marine Environment (IAMC) - CNR of Messina, Spianata San Raineri, 86, 98121 Messina, Italy; PhD School of "Cellular Biology and Biotechnology" University of Messina, Messina, Italy
| | - Geraldina Signa
- Dept. of Earth and Marine Sciences (DISTEM), University of Palermo, CoNISMa, Via Archirafi 22, 90123 Palermo, Italy
| | - Salvatrice Vizzini
- Dept. of Earth and Marine Sciences (DISTEM), University of Palermo, CoNISMa, Via Archirafi 22, 90123 Palermo, Italy
| | - Antonio Mazzola
- Dept. of Earth and Marine Sciences (DISTEM), University of Palermo, CoNISMa, Via Archirafi 22, 90123 Palermo, Italy
| | - Simone Cappello
- Institute for Coastal Marine Environment (IAMC) - CNR of Messina, Spianata San Raineri, 86, 98121 Messina, Italy
| | - Michail M Yakimov
- Institute for Coastal Marine Environment (IAMC) - CNR of Messina, Spianata San Raineri, 86, 98121 Messina, Italy
| | - Paola Quatrini
- Dept. of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, Viale delle Scienze, blg. 16, 90128 Palermo, Italy.
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Moreno R, Stowasser G, McGill RAR, Bearhop S, Phillips RA. Assessing the structure and temporal dynamics of seabird communities: the challenge of capturing marine ecosystem complexity. J Anim Ecol 2015; 85:199-212. [PMID: 26439671 PMCID: PMC4989482 DOI: 10.1111/1365-2656.12434] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2014] [Accepted: 08/13/2015] [Indexed: 02/01/2023]
Abstract
Understanding interspecific interactions, and the influences of anthropogenic disturbance and environmental change on communities, are key challenges in ecology. Despite the pressing need to understand these fundamental drivers of community structure and dynamics, only 17% of ecological studies conducted over the past three decades have been at the community level. Here, we assess the trophic structure of the procellariiform community breeding at South Georgia, to identify the factors that determine foraging niches and possible temporal changes. We collected conventional diet data from 13 sympatric species between 1974 and 2002, and quantified intra‐ and inter‐guild, and annual variation in diet between and within foraging habits. In addition, we tested the reliability of stable isotope analysis (SIA) of seabird feathers collected over a 13‐year period, in relation to those of their potential prey, as a tool to assess community structure when diets are diverse and there is high spatial heterogeneity in environmental baselines. Our results using conventional diet data identified a four‐guild community structure, distinguishing species that mainly feed on crustaceans; large fish and squid; a mixture of crustaceans, small fish and squid; or carrion. In total, Antarctic krill Euphausia superba represented 32%, and 14 other species a further 46% of the combined diet of all 13 predators, underlining the reliance of this community on relatively few types of prey. Annual variation in trophic segregation depended on relative prey availability; however, our data did not provide evidence of changes in guild structure associated with a suggested decline in Antarctic krill abundance over the past 40 years. Reflecting the differences in δ15N of potential prey (crustaceans vs. squid vs. fish and carrion), analysis of δ15N in chick feathers identified a three‐guild community structure that was constant over a 13‐year period, but lacked the trophic cluster representing giant petrels which was identified using conventional diet data. Our study is the first in recent decades to examine dietary changes in seabird communities over time. Conventional dietary analysis provided better resolution of community structure than SIA. However, δ15N in chick feathers, which reflected trophic (level) specialization, was nevertheless an effective and less time‐consuming means of monitoring temporal changes.
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Affiliation(s)
- Rocío Moreno
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK
| | - Gabriele Stowasser
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK
| | - Rona A R McGill
- Scottish Universities Environmental Research Centre (SUERC), Rankine Avenue, Scottish Enterprise Technology Park, East Kilbride, G75 0QF, UK
| | - Stuart Bearhop
- Centre for Ecology and Conservation, University of Exeter, Tremough, Penryn, Cornwall, TR10 9EZ, UK
| | - Richard A Phillips
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK
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Acosta-González A, Martirani-von Abercron SM, Rosselló-Móra R, Wittich RM, Marqués S. The effect of oil spills on the bacterial diversity and catabolic function in coastal sediments: a case study on the Prestige oil spill. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:15200-14. [PMID: 25869434 DOI: 10.1007/s11356-015-4458-y] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2015] [Accepted: 03/27/2015] [Indexed: 05/20/2023]
Abstract
The accident of the Prestige oil tanker in 2002 contaminated approximately 900 km of the coastline along the northern Spanish shore, as well as parts of Portugal and France coast, with a mixture of heavy crude oil consisting of polycyclic aromatic hydrocarbons, alkanes, asphaltenes and resins. The capacity of the autochthonous bacterial communities to respond to the oil spill was assessed indirectly by determining the hydrocarbon profiles of weathered oil samples collected along the shore, as well as through isotope ratios of seawater-dissolved CO2, and directly by analyses of denaturing gradient gel electrophoresis fingerprints and 16S rRNA gene libraries. Overall, the results evidenced biodegradation of crude oil components mediated by natural bacterial communities, with a bias towards lighter and less substituted compounds. The changes observed in the Proteobacteria, the most abundant phylum in marine sediments, were related to the metabolic profiles of the sediment. The presence of crude oil in the supratidal and intertidal zones increased the abundance of Alpha- and Gammaproteobacteria, dominated by the groups Sphingomonadaceae, Rhodobacteraceae and Chromatiales, whilst Gamma- and Deltaproteobacteria were more relevant in subtidal zones. The phylum Actinobacteria, and particularly the genus Rhodococcus, was a key player in the microbial response to the spill, especially in the degradation of the alkane fraction. The addition of inorganic fertilizers enhanced total biodegradation rates, suggesting that, in these environments, nutrients were insufficient to support significant growth after the huge increase in carbon sources, as evidenced in other spills. The presence of bacterial communities able to respond to a massive oil input in this area was consistent with the important history of pollution of the region by crude oil.
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Affiliation(s)
- Alejandro Acosta-González
- Department of Environmental Protection, Consejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Profesor Albareda 1, 18008, Granada, Spain
- Facultad de Ingeniería, Universidad de La Sabana, Autopista Norte km 7, Chía, Cundinamarca, Colombia
| | - Sophie-Marie Martirani-von Abercron
- Department of Environmental Protection, Consejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Profesor Albareda 1, 18008, Granada, Spain
| | - Ramon Rosselló-Móra
- Institut Mediterrani d'Estudis Avançats, IMEDEA, CSIC-UIB, C/. Miquel Marqués 21, 07190, Esporles, Illes Balears, Spain
| | - Regina-Michaela Wittich
- Department of Environmental Protection, Consejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Profesor Albareda 1, 18008, Granada, Spain
| | - Silvia Marqués
- Department of Environmental Protection, Consejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Profesor Albareda 1, 18008, Granada, Spain.
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Hatch JM, Wiley D, Murray KT, Welch L. Integrating Satellite-Tagged Seabird and Fishery-Dependent Data: A Case Study of Great Shearwaters (Puffinus gravis) and the U.S. New England Sink Gillnet Fishery. Conserv Lett 2015. [DOI: 10.1111/conl.12178] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
Affiliation(s)
- Joshua M. Hatch
- Integrated Statistics, Inc; 172 Shearwater Way Falmouth MA 02540 USA
| | - David Wiley
- Stellwagen Bank National Marine Sanctuary; 175 Edward Foster Road Scituate MA 01938 USA
| | - Kimberly T. Murray
- NOAA Fisheries; Northeast Fisheries Science Center; 166 Water Street Woods Hole MA 02543 USA
| | - Linda Welch
- U.S. Fish & Wildlife Service; Maine Coast Islands National Wildlife Refuge; P.O. Box 279 Milbridge ME 04658 USA
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16
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Kim J, Oh JM. Concentration of trace elements in feathers of waterfowl, Korea. ENVIRONMENTAL MONITORING AND ASSESSMENT 2014; 186:8517-25. [PMID: 25208517 DOI: 10.1007/s10661-014-4021-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2014] [Accepted: 08/21/2014] [Indexed: 05/22/2023]
Abstract
Cadmium (Cd), lead (Pb), chromium (Cr), copper (Cu), manganese (Mn), zinc (Zn), and iron (Fe) were analyzed in the breast feather of white-fronted geese (Anser albifrons, n = 15), mallards (Anas platyrhynchos, n = 4), and spot-billed ducks (Anas poecilorhyncha, n = 13) found dead in Gimpo, Korea. All of the mallards and eight of the 13 spot-billed ducks had embedded shot. Concentrations of Pb, Cr, Cu, Mn, Zn, and Fe were significantly different among waterfowl species. Mallards with embedded shot had relatively higher Pb, Cr, Mn, and Fe concentrations than the other species. Cd and Cr in feathers of waterfowl species were within the range reported for other birds, and no specimen exceeded the tentative threshold effect levels of Cd (2 μg/g dry weight (dw)) and Cr (2.8 μg/g dw) for birds. However, Pb in feathers of all four mallards and two spot-billed ducks exceeded the threshold for deleterious effects (>4 μg/g dw). Essential elements such as Cu, Mn, Zn, and Fe in the feather of waterfowl species were not at toxic levels and within the background or normal range for the homeostatic mechanisms.
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Affiliation(s)
- Jungsoo Kim
- Department of Environmental Science and Engineering, Kyung Hee University, 1 Seocheon-dong, Giheung-gu, Yongin, Gyeonggi-do, 446-701, Republic of Korea,
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Izagirre U, Garmendia L, Soto M, Etxebarria N, Marigómez I. Health status assessment through an integrative biomarker approach in mussels of different ages with a different history of exposure to the Prestige oil spill. THE SCIENCE OF THE TOTAL ENVIRONMENT 2014; 493:65-78. [PMID: 24946027 DOI: 10.1016/j.scitotenv.2014.05.118] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Revised: 05/23/2014] [Accepted: 05/25/2014] [Indexed: 06/03/2023]
Abstract
A battery of cell and tissue-level biomarkers was applied in mussels of 6 size-classes collected from Galicia and the Basque coast in summer 2007 in an attempt to examine the health status of individuals affected as adults (mature before 2003), affected during their developmental or juvenile stages (2003-2004 offspring), or not directly affected by the Prestige oil spill (POS) exposure (presumably 2005-2006 offspring). This battery of biomarkers was akin to those formerly applied on mussels of 3.5-4.5 cm shell length for which there exist biomarker reference values in the studied geographical areas. The cause-effect relationship between biological responses and the different history of exposure to POS fuel oil was intricate for different reasons: (a) growth rate was dissimilar in mussels of the two studied localities and much lower than expected, (b) a chronological basis could not be directly associated to POS events (all mussels except the smallest from Galicia had been subjected to the direct POS impact at one or another stage of their life-cycle); and (c) some biomarkers and histopathology seemingly depended on size/age irrespectively of the locality and the POS chronology. As a whole, the present study gives a very useful set of reference values of biomarkers obtained for Mytilus galloprovincialis of different size-classes. Finally, it is recommended that Mussel Watch programmes should be designed by standardising the age of the sentinel mussels rather than their size, especially if the programme covers large or diverse geographical areas, if long-term trends are relevant or if significant pollution effects on growth are expected.
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Affiliation(s)
- U Izagirre
- Research Centre for Experimental Marine Biology and Biotechnology (PIE-UPV/EHU), University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain; CBET Research Grp, Zoology and Animal Cell Biology Dept., Sci and Technol Fac., University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain
| | - L Garmendia
- Research Centre for Experimental Marine Biology and Biotechnology (PIE-UPV/EHU), University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain; CBET Research Grp, Zoology and Animal Cell Biology Dept., Sci and Technol Fac., University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain
| | - M Soto
- Research Centre for Experimental Marine Biology and Biotechnology (PIE-UPV/EHU), University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain; CBET Research Grp, Zoology and Animal Cell Biology Dept., Sci and Technol Fac., University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain
| | - N Etxebarria
- Research Centre for Experimental Marine Biology and Biotechnology (PIE-UPV/EHU), University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain; IBEA Research Grp, Analytical Chemistry Dept., Sci and Technol Fac., University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain
| | - I Marigómez
- Research Centre for Experimental Marine Biology and Biotechnology (PIE-UPV/EHU), University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain; CBET Research Grp, Zoology and Animal Cell Biology Dept., Sci and Technol Fac., University of the Basque Country (UPV/EHU), PO Box 644, E-48080 Bilbao, Basque Country, Spain.
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18
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Navarro J, Moreno R, Braun L, Sanpera C, Hennicke JC. Resource partitioning between incubating and chick-rearing brown boobies and red-tailed tropicbirds on Christmas Island. Zool Stud 2014. [DOI: 10.1186/s40555-014-0027-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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