Microplastic-antifouling paint particle contamination alters microbial communities in surrounding marine sediment

Paint used to coat surfaces in aquatic environments often contain biocides to prevent biofouling, and as these coatings degrade, antifouling paint particles (APPs) end up in aquatic, and especially marine, sediments. However, it is currently unclear what further influence APPs in the sediment have on biotic communities or processes. This study investigates how a variety of commercially-available APPs effect the marine microbial community by spiking different laboratory-manufactured APPs to sediment. Following exposure for 30 and 60 days, APPs caused a clear and consistent effect on the bacterial community composition as determined by 16S metabarcoding. This effect was strongest between 0 and 30 days, but continues to a lesser extent between 30 and 60 days. APPs appear to inhibit the highly diverse, but in general rarer, fraction of the community and/or select for specific community members to become more dominant. 71 antifouling-presence and 454 antifouling-absence indicator taxa were identified by indicator analysis. The difference in the level of classification in these two indicator groups was highly significant, with the antifouling-presence indicators having much higher percentage sequence identity to cultured taxa, while the antifouling-absence indicators appear to be made up of undescribed taxa, which may indicate that APPs act as a proxy for general anthropogenic influence or that APP contamination selects for taxa capable of being cultured. Given the clear and consistent effect APPs have on the surrounding sediment microbial community, further research into how APPs affect sediment functional processes and how such effects scale with concentration is recommended to better assess the wider consequences of these pollutants for marine biogeochemical cycles in the future. SYNOPSIS: Microplastic-paint particles are commonly found in marine sediment but little is known about how these, especially antifouling, paint particles affect sediment microbial communities. This study demonstrates that antifouling paint particles fundamentally alter sediment microbial communities.

Microbial Composition of Freshwater Marsh Sediment Responds more Strongly to Microcosm Seawater Addition than Simulated Nitrate or Phosphate Eutrophication

As sea level rise impacts coastal wetlands, saltmarsh will overtake coastal freshwater marsh in many areas, but changes in the sediment microbiome in response to saltwater intrusion are difficult to predict. Coastal freshwater marsh sediment was exposed to ambient, brackish, and saline conditions as well as to elevated nitrate and phosphate to model the combined stresses of saltwater intrusion and coastal eutrophication. Initially, sediment prokaryotic composition was similar to prior studies of freshwater marsh but diverged over time, reflecting the magnitude of increase in saltwater. There was no observed effect of nutrient amendment, potentially ranking seawater intrusion as a higher-importance compositional driver. Although the previously described loss of methanogenic populations and promotion of sulfate reducers in response to saltwater exposure was observed, taxonomic distribution was not similar to typical meso-polyhaline wetlands. Without colonization by marine taxa, such a community may be short-lived naturally, ultimately equilibrating with more common saltmarsh species. However, the recapitulation of salinity concentration by freshwater sediment microbial composition demonstrates the overwhelming nature of saltwater intrusion relative to other drivers like eutrophication.

Responses of riverbed sediment bacteria to heavy metals: Integrated evaluation based on bacterial density, activity and community structure under well-controlled sequencing batch incubation conditions

Better understanding the responses of riverbed sediment bacteria to heavy metals is a key for considering using riverbed sediment bacterial community as an indicator of river water contamination by heavy metals. For this, integrated evaluation based on bacterial density, activity and community structure through incubation experiments under well-controlled conditions is necessary to obtain more closely relevant findings that are difficult to achieve through field studies. The findings may also include those that can serve as new evidence to clarify contrary findings reported in previous studies. In this study, sequencing batch incubation experiments were performed using sediment suspensions from three rivers with catchment of different land covers and uses. The effects of four metals (Pb, Cr, Cd and Cu) were investigated by spiking them separately under three different concentration levels. Glucose was added once every day as the carbon source throughout the whole incubation lasted for 30 days. The changing trends of the density of general and heterotrophic bacteria showed clearly that the responses of sediment bacteria to Cu were obviously stronger, followed by that to Cd; whereas, the responses to Pb and Cr were not apparent. For incubation with Cu, a short-term inhibition effect appeared in the initial 3 days and was then followed by a long-term promotion effect reflected by obvious increases of bacterial density against control. In regard of bacterial activity evaluated based on the first-order consumption rate for glucose, a trend of decreases was revealed. The results of PCR-DGGE and sequence analysis of extracted 16S rDNA further suggested there were bacterial species that had strong tolerance against the metal and could grow readily to become new dominating ones. The existence of such bacterial species was inferred as the reason leading to the observed increases of bacterial density during incubation with the metal.

Intrinsic bioremediation potential of a chronically polluted marine coastal area

A microbiological survey of the Priolo Bay (eastern coast of Sicily, Ionian Sea), a chronically polluted marine coastal area, was carried out in order to discern its intrinsic bioremediation potential. Microbiological analysis, 16S rDNA-based DGGE fingerprinting and PLFAs analysis were performed on seawater and sediment samples from six stations on two transects. Higher diversity and variability among stations was detected by DGGE in sediment than in water samples although seawater revealed higher diversity of culturable hydrocarbon-degrading bacteria. The most polluted sediment hosted higher total bacterial diversity and higher abundance and diversity of culturable HC degraders. Alkane- and PAH-degrading bacteria were isolated from all stations and assigned to Alcanivorax, Marinobacter, Thalassospira, Alteromonas and Oleibacter (first isolation from the Mediterranean area). High total microbial diversity associated to a large selection of HC degraders is believed to contribute to natural attenuation of the area, provided that new contaminant contributions are avoided.