Large-scale assessment of Mediterranean marine protected areas effects on fish assemblages

Sandy bottoms have limited species richness but substantially contribute to the regional coastal fish β-diversity: A case study of the Central Mediterranean Sea

Global marine biodiversity loss impairs entire ecosystems and their stability. Robust biodiversity estimates are key to inform policies and management strategies, and need to consider the contribution of diverse habitats, including those for which estimates of biodiversity are scattered or totally absent. This study assessed the fish diversity associated with three main coastal habitats (rocky bottoms, Posidonia oceanica meadows, sandy bottoms), and their role in shaping the overall coastal fish diversity, also in relation to potential environmental and anthropogenic drivers affecting patterns of fish diversity in coastal areas. Using underwater visual census, we sampled 62 sites distributed on the three habitats, for a total of 496 replicates. We assessed the contribution of each habitat to β-diversity, divided into Local Contribution to β-diversity (LCBD), a comparative indicator of the contributions to β-diversity of each habitat, and Species Contribution to β-diversity (SCBD), which measures the relative importance of each species in affecting β-diversity. Finally, we modelled species diversity in relation to potential environmental and anthropogenic drivers. Overall, 72 species were recorded, with the highest species richness observed on rocky bottoms (56 species, 16 unique to this habitat), followed by P. oceanica (38 species, 0 unique) and sandy bottoms (32 species, 14 unique). Sandy bottom assemblages had a significantly higher contribution to LCBD than P. oceanica meadows and rocky bottoms, and two of the five species with the highest contribution to SCBD are exclusively associated with sandy bottoms. Finally, sea surface temperature, sea surface salinity, and habitat were highlighted as significant predictors of species richness. Our findings, aside from highlighting the environmental drivers of coastal fish diversity in the Mediterranean Sea, unravel the potential key role of sandy bottoms in contributing to overall coastal fish diversity and can inform conservation planning.

Sustainable tourism in the Tremiti Islands (South Italy)

An analysis of the pressure factors that influence the sustainable tourism in the Tremiti Islands (TI) has been performed. Tourist's fluxes have been investigated in terms of monthly arrival and presences showing a high value of the territorial exploitation index with high number of arrivals, particularly in August, and low occupancy rate. Effects of climatic change has been analyzed in TI with reference to the increase of average air and sea temperature in the islands. Some measures of contrast to climate change and to favour sustainable tourism have been discussed also. The CO2 emissions by ferries transport, solid waste and wastewater treatment have been calculated. Environmental taxation for sustainable tourism aimed tat CO2 content reduction is also assessed identifying the value in 1.47 €/capita on the basis of the tourist arrivals and presences considering the environmental cost for CO2 removal and showing that tourism taxation should be well accepted if funds are destined to environmental purposes.

Marine protected areas promote stability of reef fish communities under climate warming

Protection from direct human impacts can safeguard marine life, yet ocean warming crosses marine protected area boundaries. Here, we test whether protection offers resilience to marine heatwaves from local to network scales. We examine 71,269 timeseries of population abundances for 2269 reef fish species surveyed in 357 protected versus 747 open sites worldwide. We quantify the stability of reef fish abundance from populations to metacommunities, considering responses of species and functional diversity including thermal affinity of different trophic groups. Overall, protection mitigates adverse effects of marine heatwaves on fish abundance, community stability, asynchronous fluctuations and functional richness. We find that local stability is positively related to distance from centers of high human density only in protected areas. We provide evidence that networks of protected areas have persistent reef fish communities in warming oceans by maintaining large populations and promoting stability at different levels of biological organization.

Grouping groupers in the Mediterranean: Ecological baselines revealed by ancient proteins

Marine historical ecology provides a means to establish baselines to inform current fisheries management. Groupers (Epinephelidae) are key species for fisheries in the Mediterranean, which have been heavily overfished. Species abundance and distribution prior to the 20th century in the Mediterranean remains poorly known. To reconstruct the past biogeography of Mediterranean groupers, we investigated whether Zooarchaeology by Mass Spectrometry (ZooMS) can be used for identifying intra-genus grouper bones to species level. We discovered 22 novel, species-specific ZooMS biomarkers for groupers. Applying these biomarkers to Kinet Höyük, a Mediterranean archaeological site, demonstrated 4000 years of regional Epinephelus aeneus dominance and resiliency through millennia of fishing pressures, habitat degradation and climatic changes. Combining ZooMS identifications with catch size reconstructions revealed the Epinephelus aeneus capacity for growing 30 cm larger than hitherto documented, revising the maximum Total Length from 120 to 150 cm. Our results provide ecological baselines for a key Mediterranean fishery which could be leveraged to define and assess conservation targets.

Marine Noise Effects on Juvenile Sparid Fish Change among Species and Developmental Stages

Marine noise is an emerging pollutant inducing a variety of negative impacts on many animal taxa, including fish. Fish population persistence and dynamics rely on the supply of early life stages, which are often very sensitive to disturbance. Impacts of marine noise pollution (MNP) on juvenile fish have rarely been investigated in temperate regions. This is particularly true for the Mediterranean Sea, which is considered as an MNP hotspot due to intensive maritime traffic. In this study, we investigate the relationship between MNP related to boat traffic and (i) assemblage structure and (ii) the density of juvenile fishes (post-settlers at different stages) belonging to the Sparidae family. We quantified MNP produced by boating at four coastal locations in the French Riviera (NW Mediterranean Sea) by linearly combining five variables into a ‘noise index’ (NI): (i) boat visitation, (ii) number of boat passages/hour, (iii) the instantaneous underwater noise levels of passing boats, (iv) continuous boat underwater noise levels and (v) duration of exposure to boat noise. Then, using the NI, we identified an MNP gradient. By using juvenile fish visual censuses (running a total of 1488 counts), we found that (i) the assemblage structure and (ii) the density patterns of three fish species (i.e., Diplodus sargus, D. puntazzo, D. vulgaris) changed along the MNP gradient. Specifically, the density of early D. sargus post-settlers was negatively related to MNP, while late post-settler densities of D. puntazzo and, less evidently, D. vulgaris tended to decrease more rapidly with decreasing MNP. Our findings suggest the following potential impacts of MNP on juvenile sparids related to coastal boat traffic: (i) idiosyncratic effects on density depending on the species and the developmental stage (early vs. late post-settlers); (ii) negative effects on recruitment, due to possible alteration of late post-settlement movement patterns.

Assessing the Effect of Full Protection on the Biomass of Ericaria amentacea and Understory Assemblages: Evidence from Two Mediterranean Marine Protected Areas

Cystoseira sensu lato marine forests, which are among the most productive and diverse systems in rocky intertidal and subtidal habitats of the Mediterranean Sea, are experiencing a widespread decline throughout the basin due to increasing human pressures. Yet it is still unclear whether Marine Protected Areas (MPAs) may represent effective tools for conservation of these important habitat formers and their associated assemblages. Here, we compared the biomass of intertidal stands of Ericaria amentacea (C. Agardh) Molinari and Guiry and their understory assemblages between the no-take zone and control sites in two Mediterranean MPAs. We did not find evidence supporting a significant effect of full protection in increasing the biomass of E. amentacea stands and associated assemblages, except for macroalgae of the understory in one of the investigated MPAs, raising concerns on the potential effectiveness of MPAs in mitigating human impacts on these marine forests. Such findings call for major efforts to implement long-term monitoring programs of protected Cystoseira s.l. forests in order to inform an adaptive management of conservation measures within MPAs and eventually to set active interventions of restoration.

Looking for a Simple Assessment Tool for a Complex Task: Short-Term Evaluation of Changes in Fisheries Management Measures in the Pomo/Jabuka Pits Area (Central Adriatic Sea)

A Before–Intermediate–After Multiple Sites (BIAMS) analysis, namely a modified version of the Before–After–Control–Impact (BACI) approach, was used to evaluate the possible effects of fishery management measures implemented in the Pomo/Jabuka Pits area, a historically highly exploited ground for Italian and Croatian fisheries, whose impact may have contributed over the years to the modification of the ecosystem. Since 2015, the area was subject to fishing regulations changing the type of restrictions over time and space, until the definitive establishment in 2018 of a Fishery Restricted Area. These changes in the regulatory regime result in complex signals to be interpreted. The analysis was carried out on abundance indices (i.e., kg/km2 and N/km2) of five commercially or ecologically relevant species, obtained in the period 2012–2019 from two annual trawl surveys. BIAMS was based on the selection of a Closure factor, declined in three levels (i.e., BEFORE/INTERMEDIATE/AFTER) and accounting for regulation changes in time, and on three adjacent strata (i.e., “A”, “B”, and “ext ITA”) a posteriori determined according to the latest regulations. BIAMS allowed us to identify early effects (i.e., changes in abundances), overcoming the unavailability of a proper independent control site; furthermore, the selection of adjacent strata allowed the inference of possible interactions among them.

Sea urchin harvest inside marine protected areas: an opportunity to investigate the effects of exploitation where trophic upgrading is achieved

Background

Marine protected areas (MPAs) usually have both positive effects of protection for the fisheries' target species and indirect negative effects for sea urchins. Moreover, often in MPAs sea urchin human harvest is restricted, but allowed. This study is aimed at estimating the effect of human harvest of the sea urchin Paracentrotus lividus within MPAs, where fish exploitation is restricted and its density is already controlled by a higher natural predation risk. The prediction we formulated was that the lowest densities of commercial sea urchins would be found where human harvest is allowed and where the harvest is restricted, compared to where the harvest is forbidden.

Methods

At this aim, a collaborative database gained across five MPAs in Sardinia (Western Mediterranean, Italy) and areas outside was gathered collecting sea urchin abundance and size data in a total of 106 sites at different degrees of sea urchin exploitation: no, restricted and unrestricted harvest sites (NH, RH and UH, respectively). Furthermore, as estimates made in past monitoring efforts (since 2005) were available for 75 of the sampled sites, for each of the different levels of exploitation, the rate of variation in the total sea urchin density was also estimated.

Results

Results have highlighted that the lowest sea urchin total and commercial density was found in RH sites, likely for the cumulative effects of human harvest and natural predation. The overall rate of change in sea urchin density over time indicates that only NH conditions promoted the increase of sea urchin abundance and that current local management of the MPAs has driven towards an important regression of populations, by allowing the harvest. Overall, results suggest that complex mechanisms, including synergistic effects between natural biotic interactions and human pressures, may occur on sea urchin populations and the assessment of MPA effects on P. lividus populations would be crucial to guide management decisions on regulating harvest permits. Overall, the need to ban sea urchin harvest in the MPAs to avoid extreme reductions is encouraged, as inside the MPAs sea urchin populations are likely under natural predation pressures for the trophic upgrading.

An integrated assessment of the Good Environmental Status of Mediterranean Marine Protected Areas

Local, regional and global targets have been set to halt marine biodiversity loss. Europe has set its own policy targets to achieve Good Environmental Status (GES) of marine ecosystems by implementing the Marine Strategy Framework Directive (MSFD) across member states. We combined an extensive dataset across five Mediterranean ecoregions including 26 Marine Protected Areas (MPAs), their reference unprotected areas, and a no-trawl case study. Our aim was to assess if MPAs reach GES, if their effects are local or can be detected at ecoregion level or up to a Mediterranean scale, and which are the ecosystem components driving GES achievement. This was undertaken by using the analytical tool NEAT (Nested Environmental status Assessment Tool), which allows an integrated assessment of the status of marine systems. We adopted an ecosystem approach by integrating data from several ecosystem components: the seagrass Posidonia oceanica, macroalgae, sea urchins and fish. Thresholds to define the GES were set by dedicated workshops and literature review. In the Western Mediterranean, most MPAs are in good/high status, with P. oceanica and fish driving this result within MPAs. However, GES is achieved only at a local level, and the Mediterranean Sea, as a whole, results in a moderate environmental status. Macroalgal forests are overall in bad condition, confirming their status at risk. The results are significantly affected by the assumption that discrete observations over small spatial scales are representative of the total extension investigated. This calls for large-scale, dedicated assessments to realistically detect environmental status changes under different conditions. Understanding MPAs effectiveness in reaching GES is crucial to assess their role as sentinel observatories of marine systems. MPAs and trawling bans can locally contribute to the attainment of GES and to the fulfillment of the MSFD objectives. Building confidence in setting thresholds between GES and non-GES, investing in long-term monitoring, increasing the spatial extent of sampling areas, rethinking and broadening the scope of complementary tools of protection (e.g., Natura 2000 Sites), are indicated as solutions to ameliorate the status of the basin.

The Gyaros island marine reserve: A biodiversity hotspot in the eastern Mediterranean Sea

Since July 2019, Gyaros island in the central Aegean Sea, enjoys the status of a partial Marine Protected Area (MPA), allowing for exploitation by small-scale fishers following specific spatio-temporal restrictions. The need for assessing the effectiveness of the MPA in the future, led MAVA Foundation to fund a knowledge survey project aiming to serve as a baseline for future reference. A series of experimental fishing surveys took place with static nets, the outcomes of which are presented herein. From June 2018 to September 2020, a series of 8 fishing excursions with a total of 40 experimental fishing sets with bottom static nets were realized in 5 set locations around Gyaros island, inside the MPA protection zone. A total of 75 species were identified; the most abundant species, in terms of biomass, being: parrotfish-Sparisoma cretense, red scorpionfish-Scorpaena scrofa, common spiny lobster-Palinurus elephas, red porgy-Pagrus pagrus, little tunny--Euthynnus alletteratus, Mediterranean moray-Muraena helena, lesser spotted dogfish -Scyliorhinus canicula, forkbeard-Phycis phycis, surmullet-Mullus surmuletus, common cuttlefish-Sepia officinalis and common Pandora-Pagellus erythrinus. A comparison with similar data in adjacent areas outside the MPA allowed for assessing the effectiveness of the MPA based on four indicators: species diversity index, species relative biomass index, key predator species abundance, and alien fish abundance. Based solely on the experimental fishing trials, the MPA seems to be functioning, since both species diversity and abundance were higher within the protected area. However, its performance may still not be considered as optimal, as this is indicated by the large proportion of undersized key predators (e.g. groupers), although more abundant and larger than the ones residing outside the MPA.

Alien Species Threat across Marine Protected Areas of Turkey—An Updated Inventory

This study presents the first comprehensive assessment of alien species occurrences within the selected 11 Marine Protected Areas (MPAs) located on the Aegean and Levantine coasts of Turkey. The inventory includes a total of 289 species belonging to 15 phyla, in which lowest and highest diversities were observed in Saros Bay MPA (27 species, northern Aegean Sea) and Fethiye-Göcek Bay MPA (150 species, northwest Levantine Sea), respectively. Alien species distributions that were revealed in protected areas located in the southern Aegean and Levantine Seas were 56.9% similar (based on presence vs. absence data), while northern Aegean sites formed another distinct group. According to the breakdown of major phyla through the entire study areas, Mollusca had the highest alien diversity (22.1% of alien species), followed by Actinopterygii (19.0%), Arthropoda (15.2%) and Annelida (13.5%). Casual aliens were represented by very low proportions in each MPA, proving that most species were already established in the region, with a significant proportion of invasive species. Regardless of the localities, the majority of the species originated from the Red Sea, whose primary pathway of introduction is the corridor, the Suez Canal. In the absence of effective management actions against bioinvasions, MPAs located along the Turkish coastline do not currently seem to provide any protection, revealing a large conservation gap to be filled.

Mediterranean rocky reefs in the Anthropocene: Present status and future concerns

Global change is striking harder and faster in the Mediterranean Sea than elsewhere, where high levels of human pressure and proneness to climate change interact in modifying the structure and disrupting regulative mechanisms of marine ecosystems. Rocky reefs are particularly exposed to such environmental changes with ongoing trends of degradation being impressive. Due to the variety of habitat types and associated marine biodiversity, rocky reefs are critical for the functioning of marine ecosystems, and their decline could profoundly affect the provision of essential goods and services which human populations in coastal areas rely upon. Here, we provide an up-to-date overview of the status of rocky reefs, trends in human-driven changes undermining their integrity, and current and upcoming management and conservation strategies, attempting a projection on what could be the future of this essential component of Mediterranean marine ecosystems.

The MPA Guide: A framework to achieve global goals for the ocean

[Figure: see text].

A meta-analysis reveals edge effects within marine protected areas

Marine protected areas (MPAs) play a leading role in conserving and restoring marine environments. MPAs can benefit both marine populations within their boundaries and external populations owing to a net export of organisms (spillover). However, little is known about variation in performance within MPAs. For example, edge effects may degrade populations within MPAs close to their boundaries. Here we synthesize empirical estimates of 72 taxa of fish and invertebrates to explore spatial patterns across the borders of 27 no-take MPAs. We show that there is a prominent and consistent edge effect that extends approximately 1 km within the MPA, in which population sizes on the border are 60% smaller than those in the core area. Our analysis of cross-boundary population trends suggests that, globally, the smallest 64% of no-take MPAs (those of less than 10 km² in area) may hold only about half (45-56%) of the population size that is implied by their area. MPAs with buffer zones did not display edge effects, suggesting that extending no-take areas beyond the target habitats and managing fishing activities around MPA borders are critical for boosting MPA performance.

The role of competition and herbivory in biotic resistance against invaders: a synergistic effect

Invasive species pose a major threat to global diversity, and once they are well established their eradication typically becomes unfeasible. However, certain natural mechanisms can increase the resistance of native communities to invaders and can be used to guide effective management policies. Both competition and herbivory have been identified as potential biotic resistance mechanisms that can limit plant invasiveness, but it is still under debate to what extent they might be effective against well-established invaders. Surprisingly, whereas biotic mechanisms are known to interact strongly, most studies to date have examined single biotic mechanisms separately, which likely influences our understanding of the strength and effectiveness of biotic resistance against invaders. Here we use long-term field data, benthic assemblage sampling, and exclusion experiments to assess the effect of native assemblage complexity and herbivory on the invasion dynamics of a successful invasive species, the alga Caulerpa cylindracea. A higher complexity of the native algal assemblage limited C. cylindracea invasion, probably through competition by canopy-forming and erect algae. Additionally, high herbivory pressure by the fish Sarpa salpa reduced C. cylindracea abundance by more than four times. However, long-term data of the invasion reflects that biotic resistance strength can vary across the invasion process and it is only where high assemblage complexity is concomitant with high herbivory pressure, that the most significant limitation is observed (synergistic effect). Overall, the findings reported in this study highlight that neglecting the interactions between biotic mechanisms during invasive processes and restricting the studied time scales may lead to underestimations of the true capacity of native assemblages to develop resistance to invaders.

Marine Protection Induces Morphological Variation in the California Moray, Gymnothorax mordax

The effectiveness of marine protected areas (MPAs) on the general health and conservation of species, habitats, and community interactions is of great interest to researchers, managers, and recreationalists. However, the ecological and behavioral diversity of vertebrate predators of southern California kelp forests limits our ability to make general conclusions about MPA effectiveness across a variety of species. Identifying and studying species with extreme feeding habits or prey-capture strategies may offer greater insight into predator-prey relationships and reveal the trophic importance of an animal in the larger community. Moray eels (family Muraenidae) have been shown to have morphological and behavioral adaptations that allow them to consume large prey whole, identifying them as important predators. From 2015 to 2018, we studied the health and feeding behavior of a long-lived, elusive, and benthic kelp forest predator, the California moray eel (Gymnothorax mordax). We trapped eels inside and outside of Blue Cavern Onshore State Marine Conservation Area, an MPA on the northwest side of Santa Catalina Island, CA which prohibits the take of any species. Over 4 years, we captured 1736 eels. Overall, we found that morays were longer, older, heavier, had higher body condition, and were found in greater abundance within the MPA. Although fish comprised the majority of their summer diet, morays outside of the MPA were consuming a more diverse set of fish, while kelp bass comprised more than half of the diet for morays inhabiting the MPA. Additionally, we found that morays within the MPA had larger relative vertical gape distances (VGDs) and narrower heads. Our recapture data support the high site fidelity of morays, indicating that their diet and morphology are influenced by their local community. While the majority of morays are thriving in the MPA, as suggested by their robust sizes and longevity, high abundance appears to result in higher frequencies of cannibalism, the presence of an undescribed disease, and lower growth rates. Our results suggest that the MPA affects the life history of morays and may select for an alternative feeding strategy in which eels develop larger VGDs, smaller adductor muscles, and a specialized diet which is presumably influenced by the local environment. In addition, observations of cannibalistic behavior and species-specific disease provide us with important insight into natural factors that may still regulate populations removed from anthropogenic disturbances such as fishing.

It Is Not Just a Matter of Noise: Sciaena umbra Vocalizes More in the Busiest Areas of the Venice Tidal Inlets

Boat noise is known to have a detrimental effect on a vulnerable Mediterranean sciaenid, the brown meagre Sciaena umbra. During summer 2019, two acoustic surveys were conducted at 40 listening points distributed within the inlet areas of Venice (northern Adriatic Sea). Two five-minute recordings were collected per each point during both the boat traffic hours and the peak of the species’ vocal activity with the aims of (1) characterizing the local noise levels and (2) evaluating the fish spatial distribution by means of its sounds. High underwater broadband noise levels were found (sound pressure levels (SPLs)50–20kHz 107–137 dB re 1 μPa). Interestingly, a significantly higher background noise within the species’ hearing sensibility (100–3150 Hz) was highlighted in the afternoon (113 ± 5 dB re 1 μPa) compared to the night (103 ± 7 dB re 1 μPa) recordings due to a high vessel traffic. A cluster analysis based on Sciaena umbra vocalizations separated the listening points in three groups: highly vocal groups experienced higher vessel presence and higher afternoon noise levels compared to the lower ones. Since the species’ sounds are a proxy of spawning events, this suggests that the reproductive activity was placed in the noisier part of the inlets.

Exceptionally high but still growing predatory reef fish biomass after 23 years of protection in a Marine Protected Area

Marine Protected Areas (MPAs) help replenish fish assemblages, though different trophic levels may show diverse recovery patterns. Long-term protection is required to achieve total recovery but poaching events may prevent the achievement of full carrying capacity. Here, we have analysed the effect of long-term protection on the entire reef fish community and the different trophic levels in the Cabo de Palos-Islas Hormigas MPA (SE Spain; SW Mediterranean Sea) in order to assess their recovery patterns after 23 years of protection. We compared the values for carrying capacity obtained with the maximum values achieved at regional scale, and we assessed the effect of a reduction in the surveillance over a few years, during which poaching events increased, on the recovery patterns. We found that, overall, biomass of fishes increased with time while density diminished. In particular, piscivorous and macro-invertivore fish increased while the other trophic groups remained constant or declined, suggesting top-down processes. For the entire study period, those trophic groups were approaching carrying capacity; however, when accounting only for the period in which enforcement was high and constant, they grew exponentially, indicating that full carrying capacity may have not been achieved yet. When compared to other Mediterranean MPAs, the Cabo de Palos-Islas Hormigas MPA showed values for biomass that were disproportionately higher, suggesting that local factors, such as habitat structure and associated oceanographic processes, may be responsible for the dynamics found. Our results help to understand the potential trajectories of fish assemblages over a consolidated MPA and highlight empirically how the reduction of surveillance in a period may change the recovery patterns.

The effects of fishing on the ontogeny of trophic position and body condition of a small-sized temperate marine fish

Using rainbow wrasse as a model species, we evaluate the impact of protection on the relationship between body size and: i) trophic position (TP), based on δ¹⁵N; and ii) body condition (BC), based on weight-at-length. We found that the biomass of the rainbow wrasse, their predators and their competitors was higher inside the no-take marine protected area (NTA) than in the area open to fishing. The TP of rainbow wrasse was higher inside the NTA but the BC was lower. A domed relationship between TP and size was observed in both areas: the TP increased with size up to 12.6 cm total length, when all individuals shifted to terminal males, and then decreased. Although other confounding environmental variables may exist, the indirect effects of fishing on competition and predation risk are the most likely explanation for the changes in TP, BC and the ontogenetic dietary shift of the rainbow wrasse.

Distribution and Characterization of Deep Rhodolith Beds off the Campania coast (SW Italy, Mediterranean Sea)

Rhodolith beds (RBs) are bioconstructions characterized by coralline algae, which provide habitat for several associated species. Mediterranean RBs are usually located in the mesophotic zone (below 40 m), and thus are frequently remote and unexplored. Recently, the importance and vulnerability of these habitats have been recognized by the European Community and more attention has been drawn to their investigation and conservation. This study reports the results of an extensive monitoring program, carried out within the Marine Strategy Framework Directive (2008/56/EC), in six sites off the Campania coast (Italy, Mediterranean Sea). New insights were given into the distribution, cover, vitality (i.e., live/dead rhodolith ratio), structural complexity, and coralline algae composition of RBs. Remotely operated vehicles (ROV) investigations allowed the description of several RBs, and the discovery of a RB with rhodolith cover >65% offshore the Capri Island. Only two sites (Secchitiello and Punta Campanella) showed a very low mean cover of live rhodoliths (<10%); hence, not being classifiable as RBs. The collected rhodoliths were mostly small pralines (~2 cm), spheroidal to ellipsoidal, with growth-forms ranging from encrusting/warty to fruticose/lumpy. Coralline algae identification revealed a high diversity within each bed, with a total of 13 identified taxa. The genus Lithothamnion dominated all sites, and Phymatolithon calcareum and Lithothamnion corallioides, protected by the Habitats Directive (92/43/EEC), were detected in all RBs.

Operational DGT threshold values for metals in seawater from protected coastal areas in Sardinia (Western Mediterranean)

Diffusive gradients in thin films (DGTs) were used for monitoring metal (Cd, Cu, Ni, and Pb) concentrations in protected and non-protected coastal areas in Sardinia (Western Mediterranean). The deployment of DGTs in relatively undisturbed areas enabled calculation of operational DGT threshold values, which can be used for assessments of the environmental quality of coastal areas. The DGT thresholds were defined as the median metal concentrations that were found in protected areas, which ensured consideration of the natural variability of the different study sites. The calculated DGT thresholds were 11.6 ng L^-1 for Pb, 5.1 ng L^-1 for Cd, 63 ng L^-1 for Cu and 152 ng L^-1 for Ni. A comparison of the calculated DGT thresholds with previous DGT studies in the area demonstrated their suitability for identifying sites of environmental concern in the Western Mediterranean.

Patterns of predation on native and invasive alien fish in Mediterranean protected and unprotected areas

Worldwide, the loss of predatory fish due to overexploitation has altered the structure of native communities and caused ecosystem shifts. Ecosystems deprived of high-level predators may be more vulnerable to invasive alien species as the latter are subject to reduced predation control. Marine protected areas (MPAs), and particularly no-take reserves where fishing is banned, can be effective tools for the restoration of predatory relationships within their boundaries. We explored whether the restoration of high-level predatory fish populations within Mediterranean MPAs can exert top-down control on alien fish. Fish tethering experiments, including native (Sardina pilchardus, Boops boops) and alien (Siganus rivulatus) dead specimens, were conducted to quantify predation within the no-take zones of three MPAs and in unprotected areas, and to assess potential differences in predation rates and prey type preferences. A subsample of experimental units was filmed to document predation events and related fish behaviour. More high-level predators interacted with the tethered fish inside the MPAs than in unprotected areas. Yet we did not find significant differences in the consumption of alien or native fishes between MPAs and unprotected areas. The native S. pilchardus was consumed more in comparison to the other tethered fishes, regardless of protection status and location. Interestingly, the alien S. rivulatus was consumed by native predators in the western Mediterranean locations where this alien fish is not established. Despite its limitations, our study provides evidence on the ability of some native predators to feed on and potentially control certain alien species without requiring 'adaptive' time-lag periods.

An Alien Invader is the Cause of Homogenization in the Recipient Ecosystem: A Simulation-Like Approach

Biotic homogenization is an expected effect of biological invasions. Invasive alien species typically show great adaptability to a wide range of environmental conditions and may expand into different habitats, thus reducing the dissimilarity among the recipient communities. We tested this assumption by analyzing a comprehensive database (78 species × 229 samples) collected between 2012 and 2017 in the marine protected area of Portofino (NW Italy), where Caulerpa cylindracea, one of the worst invaders in the Mediterranean Sea, exhibits high substratum cover at depths between 1 m and 45 m in 14 different communities (identified according to the European Nature Information System EUNIS for habitat classification). Five samples for each of the eight depth zones (i.e., 5 m, 10 m, 15 m, 20 m, 25 m, 30 m, 35 m, and 40 m) were randomly re-sampled from the comprehensive database to produce a dataset of 67 species × 40 samples. Then, a second dataset of 66 species × 40 samples was simulated by excluding Caulerpa cylindracea. Both re-sampled datasets underwent multivariate analysis. In the presence of C. cylindracea, the overall similarity among samples was higher, thus indicating homogenization of the rocky reef communities of Portofino Marine Protected Area. Continued monitoring activity is needed to understand and assess the pattern and extent of C. cylindracea’s inclusion in the recipient ecosystems.

Small-sized and well-enforced Marine Protected Areas provide ecological benefits for piscivorous fish populations worldwide

Many piscivorous fish species are depleted and/or threatened around the world. Marine Protected Areas (MPAs) are tools for conservation and fisheries management, though there is still controversy regarding the best design for increasing their ecological effectiveness. Here, on the basis of a weighted meta-analytical approach, we have assessed the effect of 32 MPAs, distributed worldwide, on the biomass and density of piscivorous fishes. We analysed the MPA features and the biological, commercial and ecological characteristics of fishes that may affect the response of species to protection. We found a positive effect on the biomass and density of piscivores inside MPAs. This effect was stronger for the biomass of medium-sized fishes (in relation to the maximum size reported for the species) and the density of large and gregarious species. The size of the no-take zone had a significant negative impact on both response variables and differed according to the level of enforcement, with smaller no-take zones having higher levels of enforcement. Thus, MPAs help to protect piscivorous fish species, with smaller, but well enforced reserves being more effective for the protection of the local populations of piscivorous fishes throughout the world.

Organization Science improves management effectiveness of Marine Protected Areas

The ecological management effectiveness (EME) of Marine Protected Areas (MPAs) is the degree to which MPAs reach their ecological goals. The significant variability of EME among MPAs has been partly explained by MPA design, management and implementation features (e.g. surface area, enforcement, age of protection). We investigated EME variability by employing, for the first time, Organization Science. Eight Mediterranean MPAs were taken into account as case studies to explore the relationships between EME and MPA features, such as: 1) organizational size (i.e. the ratio between the number of full-time employees and the total MPA surface area), 2) management performance (i.e. the level of effort exerted to enhance and sustain the MPA management, including enforcement), 3) total surface area, and 4) MPA age. The log-response ratios of fish biomass and density in protected vs unprotected (control) areas were used as a proxy of EME. Management performance, organizational size and, to a lesser extent, MPA age were positively correlated with the log-response ratio of fish biomass, whereas total surface area did not display a significant role. None of the four features considered was significantly correlated with the log-response ratio of fish density. Based on our findings, we argue that the employment of Organization Science in the management effectiveness assessment can assist MPA managers to reach MPAs goals more effectively, with a more efficient use of available resources.

Marine protected areas are more effective but less reliable in protecting fish biomass than fish diversity

Marine protected areas (MPAs) provide multiple conservation benefits, thus raising the question of how good and consistent they are at their roles. Here, we quantified three components, namely, diversity, biomass, and other relevant variables, in numerous protected and unprotected areas across four marine ecoregions in south-western Europe. We created a "global conservation status index" (CSI_global) as the sum of CSI_diversity, CSI_biomass, and CSI_relevant. We then tested whether CSI and its three components varied as a function of protection and marine ecoregion. MPA efficiency, defined as the effect size of protection on CSI_global, was unreliable and varied with geography. CSI_biomass and CSI_relevant contributed to the unreliability of MPA efficiency, while CSI_diversity was reliable. CSI_biomass showed the major efficiency in protected areas (60%). Biomass of threatened species was the single largest variable that contributed to MPA efficiency. Our easy-to-use approach can identify high- and low-efficient MPAs and help to clarify their actual roles.

Identifying global centers of unsustainable commercial harvesting of species

Overexploitation is one of the main threats to biodiversity, but the intensity of this threat varies geographically. We identified global concentrations, on land and at sea, of 4543 species threatened by unsustainable commercial harvesting. Regions under high-intensity threat (based on accessibility on land and on fishing catch at sea) cover 4.3% of the land and 6.1% of the seas and contain 82% of all species threatened by unsustainable harvesting and >80% of the ranges of Critically Endangered species threatened by unsustainable harvesting. Currently, only 16% of these regions are covered by protected areas on land and just 6% at sea. Urgent actions are needed in these centers of unsustainable harvesting to ensure that use of species is sustainable and to prevent further species' extinctions.

Exploring the relationships between marine protected areas and invasive fish in the world's most invaded sea

Marine Protected Areas (MPAs) are an essential tool for marine biodiversity conservation. Yet, their effectiveness in protecting marine ecosystems from global stressors is debated. Biological invasions are a major driver of global change, causing biodiversity loss and altering ecosystem functioning. Here, we explored the relationships between MPAs and alien/native range-expanding fishes in the Mediterranean Sea, the world's most invaded sea. We surveyed fish and benthic communities in nine MPAs and adjacent unprotected areas across six countries. In the South and Eastern Mediterranean MPAs, the biomass of alien and native range-expanding fishes often exceeded 50% of the total fish biomass. Conversely, in the North and Western Mediterranean, alien fishes were absent. A negative relationship was found between native and alien species richness. Average and minimum sea surface temperature (SST) over six consecutive years were positively correlated with the total biomass of alien species; no alien fishes were recorded below 20.5°C average SST and 13.8°C minimum SST. We also found a negative relationship between alien fishes' biomass and the distance from the Suez Canal, which is the main pathway for the introduction of alien fish in the Mediterranean Sea. The biomass of alien and native range-expanding fishes was found to be higher in the South and Eastern Mediterranean MPAs than in adjacent unprotected areas. The association of barrens (rocky reefs deprived of vegetation) and invasive herbivores was observed at all eastern sites, regardless of protection status. Currently, the level of fishing pressure exerted on alien and native range-expanding fishes seems to be the most influential factor determining the lower biomass of invasive fishes at unprotected sites compared to MPAs. Our findings suggest that complementary management actions, such as species-targeted removals, should be taken in MPAs to effectively control invasive fish populations.

Multiscale seascape habitat of necto-benthic littoral species, application to the study of the dusky grouper habitat shift throughout ontogeny

Describing the spatial patterns of benthic coastal habitats and investigating how those patterns affect the ecology of inhabiting species is a main objective of seascape ecology. Within this emerging discipline spatial scale is a principal topic. Different spatial scales inform on different characteristics of the habitat and therefore the relation between species and their habitats would be better defined when observed at multiple levels of spatial scale. Here we apply a multiscale seascape approach to investigate the habitat preferences of juvenile and adult individuals of dusky grouper (Epinephelus marginatus) in a Mediterranean marine protected area. Results show that the information obtained at different spatial scales is complementary, improving our capability to identify the preferred habitats and how it changes throughout ontogeny. These results show the relevance of implementing multiscale seascape ecology approaches to investigate the species-habitat relationships and to improve management and conservation of necto-benthic endangered top predators.

Applying organization science to assess the management performance of Marine Protected Areas: An exploratory study

Marine Protected Areas (MPAs) are important tools to achieve marine conservation and resources management goals. The management effectiveness of MPAs (the degree to which MPAs achieve their goals) is highly variable and can be affected by many MPA attributes, for example their design, enforcement and age. Another key factor possibly affecting MPA management effectiveness is the management performance, here conceived according to Horigue et al. definition (2014) as the "level of effort exerted to enhance and sustain management of MPAs". Organization Science (OS), the discipline that studies organizations, can offer a useful framework to assess and interpret MPA management performance. Using an exploratory multiple case study approach, we applied OS principles to 11 Mediterranean MPAs in order to: i) characterize several MPA organizational features; ii) assess MPA management performance (evaluated as the effort deployed in, for example, planning the future, formalizing measurable goals, and implementing specific strategies). Results show that a number of organizational features and networking attributes are highly variable among the MPAs we have studied. For instance, goals are seldom measurable and the strategy to achieve goals is not systematically pursued. Two relevant outcomes emerge from this exploratory study: i) the management performance of the MPAs considered needs considerable improvements; ii) the methods and the approach proposed could help MPAs' managers and policy makers to understand how to improve their management performance and, consequently, their effectiveness.

Reduction of herbivorous fish pressure can facilitate focal algal species forestation on artificial structures

Coastal areas have been transformed worldwide by urbanization, so that artificial structures are now widespread. Current coastal development locally depletes many native marine species, while offering limited possibilities for their expansion. Eco-engineering interventions intend to identify ways to facilitate the presence of focal species and their associated functions on artificial habitats. An important but overlooked factor controlling restoration operations is overgrazing by herbivores. The aim of this study was to quantify the effects of different potential feeders on Cystoseira amentacea, a native canopy-forming alga of the Mediterranean infralittoral fringe, and test whether manipulation of grazing pressure can facilitate the human-guided installation of this focal species on coastal structures. Results of laboratory tests and field experiments revealed that Sarpa salpa, the only strictly native herbivorous fish in the Western Mediterranean Sea, can be a very effective grazer of C. amentacea in artificial habitats, up to as far as the infralittoral fringe, which is generally considered less accessible to fishes. S. salpa can limit the success of forestation operations in artificial novel habitats, causing up to 90% of Cystoseira loss after a few days. Other grazers, such as limpets and crabs, had only a moderate impact. Future engineering operations,intended to perform forestation of canopy-forming algae on artificial structures, should consider relevant biotic factors, such as fish overgrazing, identifying cost-effective techniques to limit their impact, as is the usual practice in restoration programmes on land.

An ecological framework for informing permitting decisions on scientific activities in protected areas

There are numerous reasons to conduct scientific research within protected areas, but research activities may also negatively impact organisms and habitats, and thus conflict with a protected area’s conservation goals. We developed a quantitative ecological decision-support framework that estimates these potential impacts so managers can weigh costs and benefits of proposed research projects and make informed permitting decisions. The framework generates quantitative estimates of the ecological impacts of the project and the cumulative impacts of the proposed project and all other projects in the protected area, and then compares the estimated cumulative impacts of all projects with policy-based acceptable impact thresholds. We use a series of simplified equations (models) to assess the impacts of proposed research to: a) the population of any targeted species, b) the major ecological assemblages that make up the community, and c) the physical habitat that supports protected area biota. These models consider both targeted and incidental impacts to the ecosystem and include consideration of the vulnerability of targeted species, assemblages, and habitats, based on their recovery time and ecological role. We parameterized the models for a wide variety of potential research activities that regularly occur in the study area using a combination of literature review and expert judgment with a precautionary approach to uncertainty. We also conducted sensitivity analyses to examine the relationships between model input parameters and estimated impacts to understand the dominant drivers of the ecological impact estimates. Although the decision-support framework was designed for and adopted by the California Department of Fish and Wildlife for permitting scientific studies in the state-wide network of marine protected areas (MPAs), the framework can readily be adapted for terrestrial and freshwater protected areas.

Soft-bottom fishes and spatial protection: findings from a temperate marine protected area

Numerous studies over the last decades have focused on marine protected areas (MPAs) and their effects on fish communities. However, there is a knowledge gap regarding how species that live associated with soft-substrates (e.g., sand, mud) respond to spatial protection. We analyzed abundance, biomass and total lengths of the soft-bottom fishes in a multiple-use MPA in the north-eastern Atlantic, the Luiz Saldanha Marine Park (Portugal), during and after the implementation of its management plan. Data were collected by experimental fishing in areas with three different levels of protection, during the implementation period and for three years after full implementation of the MPA. Univariate analysis detected significant biomass increases between the two periods. Fish assemblages were mainly structured by depth and substrate, followed by protection level. Community composition analyses revealed significant differences between protection levels and between the two periods. Species exhibited a broad variation in their response to protection, and we hypothesize that factors such as species habitat preferences, body size and late maturity might be underlying determinants. Overall, this study provides some evidence of protection effectiveness in soft-bottom fish communities, supported by the significant increase in biomass in the protected areas and the positive trends of some species.

Thirty year ecosystem trajectories in a submerged marine cave under changing pressure regime

Marine caves are unique and vulnerable habitats exhibiting high biodiversity and heterogeneity, but threatened by multiple global and local disturbances. Marine caves, although widely distributed along the Mediterranean coast, suffer for the lack of quantitative data on their structure and function, which hinder their conservation status assessment. Thanks to the availability of a nearly 30-year-long series of data (1986-2013), we evaluated ecosystem change in the Bergeggi marine cave (Ligurian Sea, NW Mediterranean), a cave with a complex shape and high habitat heterogeneity. Non-taxonomic descriptors were adopted, namely growth forms (GF) and trophic guilds (TG), which are informative about ecosystem structure and functioning, respectively. The cave experienced a general trend of change during the last three decades, mainly due to the decline in the cover of sessile organisms (especially 3-dimensional forms) matched by an increase of turf and sediment, thus causing the structural and functional homogenization of the cave community. While change before 2004 had been attributed to climatic factors (especially to the summer heat waves of 1999 and 2003), the most important rate of change was observed between 2009 and 2013, coinciding with recent major beach nourishments and the extension of the neighbouring Vado Ligure harbour, thus providing evidences on the importance of local disturbances deriving from coastal interventions. Monitoring the status of cave ecosystems is urgently needed, and the use of effective indicators, such as the specific traits here adopted (morphology and feeding strategy), could provide effective tools to assist marine cave conservation.

Global trends on reef fishes' ecology of fear: Flight initiation distance for conservation

Escape behaviors have a great potential as an indicator of the efficacy of management. For instance, the degree of fear perceived by fishes targeted by fisheries is frequently higher in unprotected marine areas than in areas where some protection is provided. We systematically reviewed the literature on how fear, which we define as variation in escape behavior, was quantified in reef fishes. In the past 25 years, a total of 33 studies were identified, many of which were published within the last five years and nearly 40% of those (n = 13) focused on Indo-Pacific reefs, showing that there are still many geographical gaps. While eleven escape metrics were identified to evaluate fish escape, flight initiation distance (FID) was the most commonly employed (n = 23). FID was used to study different questions of applied and theoretical ecology, which involved 14 reef fish families. We also used a formal meta-analysis to investigate the effects of fishing by comparing FID inside and outside marine protected areas. Fishes outside MPAs had increased FID compared to those inside MPAs. The Labridae family had a significantly higher effect sizes than Acanthuridae and Epinephelidae, suggesting that fishes in this family may be indicators of effective MPAs using FID. We conclude that protocols aimed to quantify fear in fishes, which provide accurate assessments of fishing effects on fish escape behavior, will help gauge the compliance of marine protected areas.

A user-friendly tool to evaluate the effectiveness of no-take marine reserves

Marine reserves are implemented to achieve a variety of objectives, but are seldom rigorously evaluated to determine whether those objectives are met. In the rare cases when evaluations do take place, they typically focus on ecological indicators and ignore other relevant objectives such as socioeconomics and governance. And regardless of the objectives, the diversity of locations, monitoring protocols, and analysis approaches hinder the ability to compare results across case studies. Moreover, analysis and evaluation of reserves is generally conducted by outside researchers, not the reserve managers or users, plausibly thereby hindering effective local management and rapid response to change. We present a framework and tool, called "MAREA", to overcome these challenges. Its purpose is to evaluate the extent to which any given reserve has achieved its stated objectives. MAREA provides specific guidance on data collection and formatting, and then conducts rigorous causal inference analysis based on data input by the user, providing real-time outputs about the effectiveness of the reserve. MAREA's ease of use, standardization of state-of-the-art inference methods, and ability to analyze marine reserve effectiveness across ecological, socioeconomic, and governance objectives could dramatically further our understanding and support of effective marine reserve management.

On the prevalence and dynamics of inverted trophic pyramids and otherwise top-heavy communities

Classically, biomass partitioning across trophic levels was thought to add up to a pyramidal distribution. Numerous exceptions have, however, been noted including complete pyramidal inversions. Elevated levels of biomass top-heaviness (i.e. high consumer/resource biomass ratios) have been reported from Arctic tundra communities to Brazilian phytotelmata, and in species assemblages as diverse as those dominated by sharks and ants. We highlight two major pathways for creating top-heaviness, via: (1) endogenous channels that enhance energy transfer across trophic boundaries within a community and (2) exogenous pathways that transfer energy into communities from across spatial and temporal boundaries. Consumer-resource models and allometric trophic network models combined with niche models reveal the nature of core mechanisms for promoting top-heaviness. Outputs from these models suggest that top-heavy communities can be stable, but they also reveal sources of instability. Humans are both increasing and decreasing top-heaviness in nature with ecological consequences. Current and future research on the drivers of top-heaviness can help elucidate fundamental mechanisms that shape the architecture of ecological communities and govern energy flux within and between communities. Questions emerging from the study of top-heaviness also usefully draw attention to the incompleteness and inconsistency by which ecologists often establish definitional boundaries for communities.

Long-term assessment of recruitment, early stages and population dynamics of the endangered Mediterranean fan mussel Pinna nobilis in the Columbretes Islands (NW Mediterranean)

A long-term experimental approach was undertaken to assess viability and resilience of the endangered Mediterranean fan mussel Pinna nobilis. Artificial and natural recruitment, mortality, population traits and juvenile growth were assessed in seasonal and annual surveys. In the Columbretes Islands, P. nobilis thrives in differing substrate types, from coarse sand to boulders, in Cymodocea nodosa meadows and among rhodoliths, and is always found sharing habitat with the less abundant sibling species P. rudis. In artificial collectors larval settlement occurred over a several months period, concentrating its peak in September and resulting from two separated spawning events. Recruitment in the collectors showed high inter-annual variability and was independent of depth, but positively correlated with seasonal water temperature increase in June. Natural recruitment of P. nobilis was low and showed little variability, evidencing the existence of intense post-settlement processes. Adult mortality was also low, thus leading to slow population dynamics and to the species' vulnerability to catastrophic events. Population size structure suggests the existence of a refuge size above 45 cm shell length. The fast growth during the first years of life would help shortening this vulnerability period. Altogether, essential information and tools for the species' conservation are provided, which will be critical in the current context of mass mortalities affecting P. nobilis.

Ecological effects of full and partial protection in the crowded Mediterranean Sea: a regional meta-analysis

Marine protected areas (MPAs) are a cornerstone of marine conservation. Globally, the number and coverage of MPAs are increasing, but MPA implementation lags in many human-dominated regions. In areas with intense competition for space and resources, evaluation of the effects of MPAs is crucial to inform decisions. In the human-dominated Mediterranean Sea, fully protected areas occupy only 0.04% of its surface. We evaluated the impacts of full and partial protection on biomass and density of fish assemblages, some commercially important fishes, and sea urchins in 24 Mediterranean MPAs. We explored the relationships between the level of protection and MPA size, age, and enforcement. Results revealed significant positive effects of protection for fisheries target species and negative effects for urchins as their predators benefited from protection. Full protection provided stronger effects than partial protection. Benefits of full protection for fish biomass were only correlated with the level of MPA enforcement; fish density was higher in older, better enforced, and —interestingly— smaller MPAs. Our finding that even small, well-enforced, fully protected areas can have significant ecological effects is encouraging for “crowded” marine environments. However, more data are needed to evaluate sufficient MPA sizes for protecting populations of species with varying mobility levels.

Threats to large brown algal forests in temperate seas: the overlooked role of native herbivorous fish

Canopy-forming algae are declining globally due to multiple disturbances. This decline has recently been on the increase due to the spread of some tropical herbivorous fishes. This new phenomenon has drawn attention to the effects of fish herbivory in temperate areas, which have been assumed to be negligible compared to that of invertebrates, such as sea urchins. In this study, the impact of a Mediterranean native herbivorous fish (Sarpa salpa, salema) was assessed on the canopy-forming seaweed Cystoseira amentacea var. stricta. Cystoseira amentacea forms belts in the infralittoral fringe of wave-exposed shores, which has so far been considered a refuge from fish herbivory. To test the effects of salema feeding on natural C. amentacea belts, an innovative herbivore deterrent device was conceived. Salema had a significant effect on C. amentacea by decreasing algal size, biomass and fertility, by up to 97%. The results suggest that the contribution of salema feeding to the loss of Cystoseira forests in the Mediterranean may have been overlooked. In addition, the analysis of temporal and spatial patterns of salema landings in the Mediterranean Sea suggests that salema abundance may have increased recently. Thus, along with invertebrate herbivory and anthropogenic stressors, fish herbivory may also represent a potential threat to algal forests in temperate areas.

Enhancing fish Underwater Visual Census to move forward assessment of fish assemblages: An application in three Mediterranean Marine Protected Areas

Monitoring fish assemblages is needed to assess whether Marine Protected Areas (MPAs) are meeting their conservation and fisheries management goals, as it allows one to track the progress of recovery of exploited species and associated communities. Underwater Visual Census techniques (UVC) are used to monitor fish assemblages in MPAs. UVCs should be adapted to fish abundance, body-size and behaviour, which can strongly affect fish detectability. In Mediterranean subtidal habitats, however, UVC strip transects of one surface area (25x5 m²) are commonly used to survey the whole fish assemblage, from large shy fish to small crypto-benthic fish. Most high trophic level predators (HTLPs) are large shy fish which rarely swim close to divers and, consequently, their abundance may be under-estimated with commonly used transects. Here, we propose an improvement to traditional transect surveys to better account for differences in behaviour among and within species. First, we compared the effectiveness of combining two transect surface areas (large: 35x20 m²; medium: 25x5 m²) in quantifying large, shy fish within and outside Mediterranean MPAs. We identified species-specific body-size thresholds defining a smaller and a larger size class better sampled by medium and large transects respectively. Combining large and medium transects provided more accurate biomass and species richness estimates for large, shy species than using medium transects alone. We thus combined the new approach with two other transect surface areas commonly used to survey crypto-benthic (10x1 m²) and necto-benthic (25x5 m²) species in order to assess how effectively MPAs protection the whole fish assemblage. We verified that MPAs offer significant protection for HTLPs, their response in terms of biomass and density increase in MPAs was always higher in magnitude than other functional groups. Inside MPAs, the contribution of HTLP reached >25% of total fish biomass, against < 2% outside MPAs. Surveys with multiple transect surface areas allow for a more realistic assessment of the structure of the whole fish assemblage and better assessment of potential recovery of HTLPs within reserves of HTLP.

Genetic identification of istiophorid larvae from the Gulf of Mexico based on the analysis of mitochondrial DNA control region sequences

Assigning relative importance of spawning and nursery habitats for threatened and endangered teleosts, such as those seen in the Gulf of Mexico (GoM), relies on the proper identification of the early life-history stages of the species of concern. Here, sequencing a portion of the mitochondrial DNA (mtDNA) control region (CR) I as barcodes is recommended to identify istiophorid (billfish) larvae in the Atlantic Ocean because of its high resolution and the intrinsic value of the levels of genetic variation that can be extracted from these data. The universality of the primers employed here demonstrates their utility for not only the positive identification of istiophorids in the GoM, but for any larval teleost occurring in areas recognized as larval hotspots worldwide.

Resetting predator baselines in coral reef ecosystems

What did coral reef ecosystems look like before human impacts became pervasive? Early efforts to reconstruct baselines resulted in the controversial suggestion that pristine coral reefs have inverted trophic pyramids, with disproportionally large top predator biomass. The validity of the coral reef inverted trophic pyramid has been questioned, but until now, was not resolved empirically. We use data from an eight-year tag-recapture program with spatially explicit, capture-recapture models to re-examine the population size and density of a key top predator at Palmyra atoll, the same location that inspired the idea of inverted trophic biomass pyramids in coral reef ecosystems. Given that animal movement is suspected to have significantly biased early biomass estimates of highly mobile top predators, we focused our reassessment on the most mobile and most abundant predator at Palmyra, the grey reef shark (Carcharhinus amblyrhynchos). We estimated a density of 21.3 (95% CI 17.8, 24.7) grey reef sharks/km², which is an order of magnitude lower than the estimates that suggested an inverted trophic pyramid. Our results indicate that the trophic structure of an unexploited reef fish community is not inverted, and that even healthy top predator populations may be considerably smaller, and more precarious, than previously thought.