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Nair SSK, David LR, Shariff A, Maskari SA, Mawali AA, Weis S, Fouad T, Ozsahin DU, Alshuweihi A, Obaideen A, Elshami W. CovMediScanX: A medical imaging solution for COVID-19 diagnosis from chest X-ray images. J Med Imaging Radiat Sci 2024; 55:272-280. [PMID: 38594085 DOI: 10.1016/j.jmir.2024.03.046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 02/17/2024] [Accepted: 03/19/2024] [Indexed: 04/11/2024]
Abstract
INTRODUCTION Radiologists have extensively employed the interpretation of chest X-rays (CXR) to identify visual markers indicative of COVID-19 infection, offering an alternative approach for the screening of infected individuals. This research article presents CovMediScanX, a deep learning-based framework designed for a rapid and automated diagnosis of COVID-19 from CXR scan images. METHODS The proposed approach encompasses gathering and preprocessing CXR image datasets, training deep learning-based custom-made Convolutional Neural Network (CNN), pre-trained and hybrid transfer learning models, identifying the highest-performing model based on key evaluation metrics, and embedding this model into a web interface called CovMediScanX, designed for radiologists to detect the COVID-19 status in new CXR images. RESULTS The custom-made CNN model obtained a remarkable testing accuracy of 94.32% outperforming other models. CovMediScanX, employing the custom-made CNN underwent evaluation with an independent dataset also. The images in the independent dataset are sourced from a scanning machine that is entirely different from those used for the training dataset, highlighting a clear distinction of datasets in their origins. The evaluation outcome highlighted the framework's capability to accurately detect COVID-19 cases, showcasing encouraging results with a precision of 73% and a recall of 84% for positive cases. However, the model requires further enhancement, particularly in improving its detection of normal cases, as evidenced by lower precision and recall rates. CONCLUSION The research proposes CovMediScanX framework that demonstrates promising potential in automatically identifying COVID-19 cases from CXR images. While the model's overall performance on independent data needs improvement, it is evident that addressing bias through the inclusion of diverse data sources during training could further enhance accuracy and reliability.
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Affiliation(s)
| | - Leena R David
- Department of Medical Diagnostic Imaging, College of Health Sciences, University of Sharjah, United Arab Emirates.
| | - Abdulwahid Shariff
- Department of Postgraduate Studies, University of Dar es Salaam, Tanzania
| | - Saqar Al Maskari
- Department of Computing and Electronics Engineering, Middle East College, Sultanate of Oman
| | - Adhra Al Mawali
- Quality Assurance and Planning, German University of Technology (GUtech), Sultanate of Oman
| | - Sammy Weis
- University Hospital, Sharjah, United Arab Emirates
| | - Taha Fouad
- University Hospital, Sharjah, United Arab Emirates
| | - Dilber Uzun Ozsahin
- Department of Medical Diagnostic Imaging, College of Health Sciences, University of Sharjah, United Arab Emirates
| | | | | | - Wiam Elshami
- Department of Medical Diagnostic Imaging, College of Health Sciences, University of Sharjah, United Arab Emirates
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Qayyum A, Benzinou A, Saidani O, Alhayan F, Khan MA, Masood A, Mazher M. Assessment and classification of COVID-19 DNA sequence using pairwise features concatenation from multi-transformer and deep features with machine learning models. SLAS Technol 2024; 29:100147. [PMID: 38796034 DOI: 10.1016/j.slast.2024.100147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Revised: 03/31/2024] [Accepted: 05/22/2024] [Indexed: 05/28/2024]
Abstract
The 2019 novel coronavirus (renamed SARS-CoV-2, and generally referred to as the COVID-19 virus) has spread to 184 countries with over 1.5 million confirmed cases. Such a major viral outbreak demands early elucidation of taxonomic classification and origin of the virus genomic sequence, for strategic planning, containment, and treatment. The emerging global infectious COVID-19 disease by novel Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) presents critical threats to global public health and the economy since it was identified in late December 2019 in China. The virus has gone through various pathways of evolution. Due to the continued evolution of the SARS-CoV-2 pandemic, researchers worldwide are working to mitigate, suppress its spread, and better understand it by deploying deep learning and machine learning approaches. In a general computational context for biomedical data analysis, DNA sequence classification is a crucial challenge. Several machine and deep learning techniques have been used in recent years to complete this task with some success. The classification of DNA sequences is a key research area in bioinformatics as it enables researchers to conduct genomic analysis and detect possible diseases. In this paper, three state-of-the-art deep learning-based models are proposed using two DNA sequence conversion methods. We also proposed a novel multi-transformer deep learning model and pairwise features fusion technique for DNA sequence classification. Furthermore, deep features are extracted from the last layer of the multi-transformer and used in machine-learning models for DNA sequence classification. The k-mer and one-hot encoding sequence conversion techniques have been presented. The proposed multi-transformer achieved the highest performance in COVID DNA sequence classification. Automatic identification and classification of viruses are essential to avoid an outbreak like COVID-19. It also helps in detecting the effect of viruses and drug design.
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Affiliation(s)
- Abdul Qayyum
- National Heart and Lung Institute, Imperial College London, London, United Kingdom
| | | | - Oumaima Saidani
- Department of Information Systems, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, P.O.Box 84428, Riyadh 11671, Saudi Arabia.
| | - Fatimah Alhayan
- Department of Information Systems, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, P.O.Box 84428, Riyadh 11671, Saudi Arabia.
| | - Muhammad Attique Khan
- Department of Computer Science and Mathematics, Lebanese American University, Beirut, Lebanon
| | - Anum Masood
- Department of Physics, Norwegian University of Science and Technology, Trondheim NO-7491, Norway.
| | - Moona Mazher
- Centre for Medical Image Computing, Department of Computer Science, University College London, London, United Kingdom
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Bennour A, Ben Aoun N, Khalaf OI, Ghabban F, Wong WK, Algburi S. Contribution to pulmonary diseases diagnostic from X-ray images using innovative deep learning models. Heliyon 2024; 10:e30308. [PMID: 38707425 PMCID: PMC11068804 DOI: 10.1016/j.heliyon.2024.e30308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Revised: 04/09/2024] [Accepted: 04/23/2024] [Indexed: 05/07/2024] Open
Abstract
Pulmonary disease identification and characterization are among the most intriguing research topics of recent years since they require an accurate and prompt diagnosis. Although pulmonary radiography has helped in lung disease diagnosis, the interpretation of the radiographic image has always been a major concern for doctors and radiologists to reduce diagnosis errors. Due to their success in image classification and segmentation tasks, cutting-edge artificial intelligence techniques like machine learning (ML) and deep learning (DL) are widely encouraged to be applied in the field of diagnosing lung disorders and identifying them using medical images, particularly radiographic ones. For this end, the researchers are concurring to build systems based on these techniques in particular deep learning ones. In this paper, we proposed three deep-learning models that were trained to identify the presence of certain lung diseases using thoracic radiography. The first model, named "CovCXR-Net", identifies the COVID-19 disease (two cases: COVID-19 or normal). The second model, named "MDCXR3-Net", identifies the COVID-19 and pneumonia diseases (three cases: COVID-19, pneumonia, or normal), and the last model, named "MDCXR4-Net", is destined to identify the COVID-19, pneumonia and the pulmonary opacity diseases (4 cases: COVID-19, pneumonia, pulmonary opacity or normal). These models have proven their superiority in comparison with the state-of-the-art models and reached an accuracy of 99,09 %, 97.74 %, and 90,37 % respectively with three benchmarks.
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Affiliation(s)
- Akram Bennour
- LAMIS Laboratiry, Echahid Cheikh Larbi Tebessi University, Tebessa, Algeria
| | - Najib Ben Aoun
- College of Computer Science and Information Technology, Al-Baha University, Al Baha, Saudi Arabia
- REGIM-Lab: Research Groups in Intelligent Machines, National School of Engineers of Sfax (ENIS), University of Sfax, Tunisia
| | - Osamah Ibrahim Khalaf
- Department of Solar, Al-Nahrain Research Center for Renewable Energy, Al-Nahrain University, Jadriya, Baghdad, Iraq
| | - Fahad Ghabban
- College of Computer Science and Engineering, Taibah University, Medina, Saudi Arabia
| | | | - Sameer Algburi
- Al-Kitab University, College of Engineering Techniques, Kirkuk, Iraq
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Shayegan MJ. A brief review and scientometric analysis on ensemble learning methods for handling COVID-19. Heliyon 2024; 10:e26694. [PMID: 38420425 PMCID: PMC10901105 DOI: 10.1016/j.heliyon.2024.e26694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 02/07/2024] [Accepted: 02/19/2024] [Indexed: 03/02/2024] Open
Abstract
Numerous efforts and research have been conducted worldwide to combat the coronavirus disease 2019 (COVID-19) pandemic. In this regard, some researchers have focused on deep and machine-learning approaches to discover more about this disease. There have been many articles on using ensemble learning methods for COVID-19 detection. Still, there seems to be no scientometric analysis or a brief review of these researches. Hence, a combined method of scientometric analysis and brief review was used to study the published articles that employed an ensemble learning approach to detect COVID-19. This research used both methods to overcome their limitations, leading to enhanced and reliable outcomes. The related articles were retrieved from the Scopus database. Then a two-step procedure was employed. A concise review of the collected articles was conducted. Then they underwent scientometric and bibliometric analyses. The findings revealed that convolutional neural network (CNN) is the mostly employed algorithm, while support vector machine (SVM), random forest, Resnet, DenseNet, and visual geometry group (VGG) were also frequently used. Additionally, China has had a significant presence in the numerous top-ranking categories of this field of research. Both study phases yielded valuable results and rankings.
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Garg A, Alag S, Duncan D. CoSev: Data-Driven Optimizations for COVID-19 Severity Assessment in Low-Sample Regimes. Diagnostics (Basel) 2024; 14:337. [PMID: 38337853 PMCID: PMC10855975 DOI: 10.3390/diagnostics14030337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 01/06/2024] [Accepted: 01/19/2024] [Indexed: 02/12/2024] Open
Abstract
Given the pronounced impact COVID-19 continues to have on society-infecting 700 million reported individuals and causing 6.96 million deaths-many deep learning works have recently focused on the virus's diagnosis. However, assessing severity has remained an open and challenging problem due to a lack of large datasets, the large dimensionality of images for which to find weights, and the compute limitations of modern graphics processing units (GPUs). In this paper, a new, iterative application of transfer learning is demonstrated on the understudied field of 3D CT scans for COVID-19 severity analysis. This methodology allows for enhanced performance on the MosMed Dataset, which is a small and challenging dataset containing 1130 images of patients for five levels of COVID-19 severity (Zero, Mild, Moderate, Severe, and Critical). Specifically, given the large dimensionality of the input images, we create several custom shallow convolutional neural network (CNN) architectures and iteratively refine and optimize them, paying attention to learning rates, layer types, normalization types, filter sizes, dropout values, and more. After a preliminary architecture design, the models are systematically trained on a simplified version of the dataset-building models for two-class, then three-class, then four-class, and finally five-class classification. The simplified problem structure allows the model to start learning preliminary features, which can then be further modified for more difficult classification tasks. Our final model CoSev boosts classification accuracies from below 60% at first to 81.57% with the optimizations, reaching similar performance to the state-of-the-art on the dataset, with much simpler setup procedures. In addition to COVID-19 severity diagnosis, the explored methodology can be applied to general image-based disease detection. Overall, this work highlights innovative methodologies that advance current computer vision practices for high-dimension, low-sample data as well as the practicality of data-driven machine learning and the importance of feature design for training, which can then be implemented for improvements in clinical practices.
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Affiliation(s)
- Aksh Garg
- Computer Science Department, Stanford University, Stanford, CA 94305, USA; (A.G.); (S.A.)
| | - Shray Alag
- Computer Science Department, Stanford University, Stanford, CA 94305, USA; (A.G.); (S.A.)
| | - Dominique Duncan
- Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, University of Southern California, Los Angeles, CA 90033, USA
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Murphy K, Muhairwe J, Schalekamp S, van Ginneken B, Ayakaka I, Mashaete K, Katende B, van Heerden A, Bosman S, Madonsela T, Gonzalez Fernandez L, Signorell A, Bresser M, Reither K, Glass TR. COVID-19 screening in low resource settings using artificial intelligence for chest radiographs and point-of-care blood tests. Sci Rep 2023; 13:19692. [PMID: 37952026 PMCID: PMC10640556 DOI: 10.1038/s41598-023-46461-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 11/01/2023] [Indexed: 11/14/2023] Open
Abstract
Artificial intelligence (AI) systems for detection of COVID-19 using chest X-Ray (CXR) imaging and point-of-care blood tests were applied to data from four low resource African settings. The performance of these systems to detect COVID-19 using various input data was analysed and compared with antigen-based rapid diagnostic tests. Participants were tested using the gold standard of RT-PCR test (nasopharyngeal swab) to determine whether they were infected with SARS-CoV-2. A total of 3737 (260 RT-PCR positive) participants were included. In our cohort, AI for CXR images was a poor predictor of COVID-19 (AUC = 0.60), since the majority of positive cases had mild symptoms and no visible pneumonia in the lungs. AI systems using differential white blood cell counts (WBC), or a combination of WBC and C-Reactive Protein (CRP) both achieved an AUC of 0.74 with a suggested optimal cut-off point at 83% sensitivity and 63% specificity. The antigen-RDT tests in this trial obtained 65% sensitivity at 98% specificity. This study is the first to validate AI tools for COVID-19 detection in an African setting. It demonstrates that screening for COVID-19 using AI with point-of-care blood tests is feasible and can operate at a higher sensitivity level than antigen testing.
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Affiliation(s)
- Keelin Murphy
- Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands.
| | | | - Steven Schalekamp
- Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands
| | - Bram van Ginneken
- Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands
| | - Irene Ayakaka
- SolidarMed, Partnerships for Health, Maseru, Lesotho
| | | | | | - Alastair van Heerden
- Centre for Community Based Research, Human Sciences Research Council, Pietermaritzburg, South Africa
- SAMRC/WITS Developmental Pathways for Health Research Unit, Department of Paediatrics, School of Clinical Medicine, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, Gauteng, South Africa
| | - Shannon Bosman
- Centre for Community Based Research, Human Sciences Research Council, Pietermaritzburg, South Africa
| | - Thandanani Madonsela
- Centre for Community Based Research, Human Sciences Research Council, Pietermaritzburg, South Africa
| | - Lucia Gonzalez Fernandez
- Department of Infectious Diseases and Hospital Epidemiology, University Hospital Basel, Basel, Switzerland
- SolidarMed, Partnerships for Health, Lucerne, Switzerland
| | - Aita Signorell
- Swiss Tropical and Public Health Institute, Allschwil, Switzerland
- University of Basel, Basel, Switzerland
| | - Moniek Bresser
- Swiss Tropical and Public Health Institute, Allschwil, Switzerland
- University of Basel, Basel, Switzerland
| | - Klaus Reither
- Swiss Tropical and Public Health Institute, Allschwil, Switzerland
- University of Basel, Basel, Switzerland
| | - Tracy R Glass
- Swiss Tropical and Public Health Institute, Allschwil, Switzerland
- University of Basel, Basel, Switzerland
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7
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Rangel G, Cuevas-Tello JC, Rivera M, Renteria O. A Deep Learning Model Based on Capsule Networks for COVID Diagnostics through X-ray Images. Diagnostics (Basel) 2023; 13:2858. [PMID: 37685396 PMCID: PMC10486517 DOI: 10.3390/diagnostics13172858] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 08/22/2023] [Accepted: 08/24/2023] [Indexed: 09/10/2023] Open
Abstract
X-ray diagnostics are widely used to detect various diseases, such as bone fracture, pneumonia, or intracranial hemorrhage. This method is simple and accessible in most hospitals, but requires an expert who is sometimes unavailable. Today, some diagnoses are made with the help of deep learning algorithms based on Convolutional Neural Networks (CNN), but these algorithms show limitations. Recently, Capsule Networks (CapsNet) have been proposed to overcome these problems. In our work, CapsNet is used to detect whether a chest X-ray image has disease (COVID or pneumonia) or is healthy. An improved model called DRCaps is proposed, which combines the advantage of CapsNet and the dilation rate (dr) parameter to manage images with 226 × 226 resolution. We performed experiments with 16,669 chest images, in which our model achieved an accuracy of 90%. Furthermore, the model size is 11M with a reconstruction stage, which helps to avoid overfitting. Experiments show how the reconstruction stage works and how we can avoid the max-pooling operation for networks with a stride and dilation rate to downsampling the convolution layers. In this paper, DRCaps is superior to other comparable models in terms of accuracy, parameters, and image size handling. The main idea is to keep the model as simple as possible without using data augmentation or a complex preprocessing stage.
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Affiliation(s)
- Gabriela Rangel
- Facultad de Ingeniería, Universidad Autonoma de San Luis Potosi, San Luis Potosi 78290, Mexico;
- Tecnologico Nacional de Mexico/ITSSLPC, San Luis Potosi 78421, Mexico
| | - Juan C. Cuevas-Tello
- Facultad de Ingeniería, Universidad Autonoma de San Luis Potosi, San Luis Potosi 78290, Mexico;
| | - Mariano Rivera
- Centro de Investigacion en Matematicas, Guanajuato 36000, Mexico; (M.R.); (O.R.)
| | - Octavio Renteria
- Centro de Investigacion en Matematicas, Guanajuato 36000, Mexico; (M.R.); (O.R.)
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Highly accurate multiclass classification of respiratory system diseases from chest radiography images using deep transfer learning technique. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/05/2023]
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9
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Akila SM, Imanov E, Almezhghwi K. Investigating Beta-Variational Convolutional Autoencoders for the Unsupervised Classification of Chest Pneumonia. Diagnostics (Basel) 2023; 13:2199. [PMID: 37443592 DOI: 10.3390/diagnostics13132199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2023] [Revised: 06/21/2023] [Accepted: 06/22/2023] [Indexed: 07/15/2023] Open
Abstract
The world's population is increasing and so is the challenge on existing healthcare infrastructure to cope with the growing demand in medical diagnosis and evaluation. Although human experts are primarily tasked with the diagnosis of different medical conditions, artificial intelligence (AI)-assisted diagnoses have become considerably useful in recent times. One of the critical lung infections, which requires early diagnosis and subsequent treatment to reduce the mortality rate, is pneumonia. There are different methods for obtaining a pneumonia diagnosis; however, the adoption of chest X-rays is popular since it is non-invasive. The AI systems for a pneumonia diagnosis using chest X-rays are often built on supervised machine-learning (ML) models, which require labeled datasets for development. However, collecting labeled datasets is sometimes infeasible due to constraints such as human resources, cost, and time. As such, the problem that we address in this paper is the unsupervised classification of pneumonia using unsupervised ML models including the beta-variational convolutional autoencoder (β-VCAE) and other variants, such as convolutional autoencoders (CAE), denoising convolutional autoencoders (DCAE), and sparse convolutional autoencoders (SCAE). Namely, the pneumonia classification problem is cast into an anomaly detection to develop the aforementioned ML models. The experimental results show that pneumonia can be diagnosed with high recall, precision, f1-score, and f2-score using the proposed unsupervised models. In addition, we observe that the proposed models are competitive with the state-of-the-art models, which are trained on a labeled dataset.
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Affiliation(s)
- Serag Mohamed Akila
- Department of Biomedical Engineering, Near East University, Mersin 10, 99138 Nicosia, Turkey
| | - Elbrus Imanov
- Department of Computer Engineering, Near East University, Mersin 10, 99138 Nicosia, Turkey
| | - Khaled Almezhghwi
- Electrical and Electronics Engineering, College of Electronics Technology Tripoli, Tripoli 00000, Libya
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Moussaid A, Zrira N, Benmiloud I, Farahat Z, Karmoun Y, Benzidia Y, Mouline S, El Abdi B, Bourkadi JE, Ngote N. On the Implementation of a Post-Pandemic Deep Learning Algorithm Based on a Hybrid CT-Scan/X-ray Images Classification Applied to Pneumonia Categories. Healthcare (Basel) 2023; 11:healthcare11050662. [PMID: 36900667 PMCID: PMC10000749 DOI: 10.3390/healthcare11050662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 02/11/2023] [Accepted: 02/12/2023] [Indexed: 03/12/2023] Open
Abstract
The identification and characterization of lung diseases is one of the most interesting research topics in recent years. They require accurate and rapid diagnosis. Although lung imaging techniques have many advantages for disease diagnosis, the interpretation of medial lung images has always been a major problem for physicians and radiologists due to diagnostic errors. This has encouraged the use of modern artificial intelligence techniques such as deep learning. In this paper, a deep learning architecture based on EfficientNetB7, known as the most advanced architecture among convolutional networks, has been constructed for classification of medical X-ray and CT images of lungs into three classes namely: common pneumonia, coronavirus pneumonia and normal cases. In terms of accuracy, the proposed model is compared with recent pneumonia detection techniques. The results provided robust and consistent features to this system for pneumonia detection with predictive accuracy according to the three classes mentioned above for both imaging modalities: radiography at 99.81% and CT at 99.88%. This work implements an accurate computer-aided system for the analysis of radiographic and CT medical images. The results of the classification are promising and will certainly improve the diagnosis and decision making of lung diseases that keep appearing over time.
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Affiliation(s)
- Abdelghani Moussaid
- MECAtronique Team, CPS2E Laboratory, National Superior School of Mines Rabat, Rabat 53000, Morocco
- ISITS-Maintenance Biomédicale-/Rabat, Abulcasis International University of Health Sciences, Rabat 10000, Morocco
- Correspondence:
| | - Nabila Zrira
- ADOS Team, LISTD Laboratory, National Superior School of Mines Rabat, Rabat 53000, Morocco
| | - Ibtissam Benmiloud
- MECAtronique Team, CPS2E Laboratory, National Superior School of Mines Rabat, Rabat 53000, Morocco
| | - Zineb Farahat
- SSDT Team, LISTD Laboratory, National Superior School of Mines Rabat, Rabat 53000, Morocco
- Medical Simulation Center/Rabat of the Cheikh Zaid Foundation, Rabat 10000, Morocco
| | - Youssef Karmoun
- ISITS-Maintenance Biomédicale-/Rabat, Abulcasis International University of Health Sciences, Rabat 10000, Morocco
| | - Yasmine Benzidia
- ISITS-Maintenance Biomédicale-/Rabat, Abulcasis International University of Health Sciences, Rabat 10000, Morocco
| | - Soumaya Mouline
- Cheikh Zaïd International University Hospital, B.P. 6533, Rabat 10000, Morocco
| | - Bahia El Abdi
- ISITS-Maintenance Biomédicale-/Rabat, Abulcasis International University of Health Sciences, Rabat 10000, Morocco
| | - Jamal Eddine Bourkadi
- Faculty of Medicine and Pharmacy, Mohammed V University, B.P. 6203, Rabat 10000, Morocco
| | - Nabil Ngote
- MECAtronique Team, CPS2E Laboratory, National Superior School of Mines Rabat, Rabat 53000, Morocco
- ISITS-Maintenance Biomédicale-/Rabat, Abulcasis International University of Health Sciences, Rabat 10000, Morocco
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Novel Light Convolutional Neural Network for COVID Detection with Watershed Based Region Growing Segmentation. J Imaging 2023; 9:jimaging9020042. [PMID: 36826961 PMCID: PMC9963211 DOI: 10.3390/jimaging9020042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Revised: 02/06/2023] [Accepted: 02/08/2023] [Indexed: 02/16/2023] Open
Abstract
A rapidly spreading epidemic, COVID-19 had a serious effect on millions and took many lives. Therefore, for individuals with COVID-19, early discovery is essential for halting the infection's progress. To quickly and accurately diagnose COVID-19, imaging modalities, including computed tomography (CT) scans and chest X-ray radiographs, are frequently employed. The potential of artificial intelligence (AI) approaches further explored the creation of automated and precise COVID-19 detection systems. Scientists widely use deep learning techniques to identify coronavirus infection in lung imaging. In our paper, we developed a novel light CNN model architecture with watershed-based region-growing segmentation on Chest X-rays. Both CT scans and X-ray radiographs were employed along with 5-fold cross-validation. Compared to earlier state-of-the-art models, our model is lighter and outperformed the previous methods by achieving a mean accuracy of 98.8% on X-ray images and 98.6% on CT scans, predicting the rate of 0.99% and 0.97% for PPV (Positive predicted Value) and NPV (Negative predicted Value) rate of 0.98% and 0.99%, respectively.
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12
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Kao CL, Chien LC, Wang MC, Tang JS, Huang PC, Chuang CC, Shih CL. The development of new remote technologies in disaster medicine education: A scoping review. Front Public Health 2023; 11:1029558. [PMID: 37033011 PMCID: PMC10080133 DOI: 10.3389/fpubh.2023.1029558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2022] [Accepted: 02/27/2023] [Indexed: 04/11/2023] Open
Abstract
Background Remote teaching and online learning have significantly changed the responsiveness and accessibility after the COVID-19 pandemic. Disaster medicine (DM) has recently gained prominence as a critical issue due to the high frequency of worldwide disasters, especially in 2021. The new artificial intelligence (AI)-enhanced technologies and concepts have recently progressed in DM education. Objectives The aim of this article is to familiarize the reader with the remote technologies that have been developed and used in DM education over the past 20 years. Literature scoping reviews Mobile edge computing (MEC), unmanned aerial vehicles (UAVs)/drones, deep learning (DL), and visual reality stimulation, e.g., head-mounted display (HMD), are selected as promising and inspiring designs in DM education. Methods We performed a comprehensive review of the literature on the remote technologies applied in DM pedagogy for medical, nursing, and social work, as well as other health discipline students, e.g., paramedics. Databases including PubMed (MEDLINE), ISI Web of Science (WOS), EBSCO (EBSCO Essentials), Embase (EMB), and Scopus were used. The sourced results were recorded in a Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) flowchart and followed in accordance with the PRISMA extension Scoping Review checklist. We included peer-reviewed articles, Epubs (electronic publications such as databases), and proceedings written in English. VOSviewer for related keywords extracted from review articles presented as a tabular summary to demonstrate their occurrence and connections among these DM education articles from 2000 to 2022. Results A total of 1,080 research articles on remote technologies in DM were initially reviewed. After exclusion, 64 articles were included in our review. Emergency remote teaching/learning education, remote learning, online learning/teaching, and blended learning are the most frequently used keywords. As new remote technologies used in emergencies become more advanced, DM pedagogy is facing more complex problems. Discussions Artificial intelligence-enhanced remote technologies promote learning incentives for medical undergraduate students or graduate professionals, but the efficacy of learning quality remains uncertain. More blended AI-modulating pedagogies in DM education could be increasingly important in the future. More sophisticated evaluation and assessment are needed to implement carefully considered designs for effective DM education.
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Affiliation(s)
- Chia-Lung Kao
- Department of Emergency Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan
- Regional Emergency Medical Operations Center-Tainan Branch, Ministry of Health and Welfare, Taipei City, Taiwan
| | - Li-Chien Chien
- Department of Emergency Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan
- Regional Emergency Medical Operations Center-Tainan Branch, Ministry of Health and Welfare, Taipei City, Taiwan
| | - Mei-Chin Wang
- Department of Nursing, Chung Hwa University of Medical Technology, Tainan, Taiwan
| | - Jing-Shia Tang
- Department of Nursing, Chung Hwa University of Medical Technology, Tainan, Taiwan
| | - Po-Chang Huang
- Department of Emergency Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan
| | - Chia-Chang Chuang
- Department of Emergency Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan
- Regional Emergency Medical Operations Center-Tainan Branch, Ministry of Health and Welfare, Taipei City, Taiwan
- *Correspondence: Chia-Chang Chuang
| | - Chung-Liang Shih
- Department of Medical Affairs, Ministry of Health and Welfare, Taipei City, Taiwan
- Department of Emergency Medicine, College of Medicine, National Taiwan University, Taipei City, Taiwan
- Chung-Liang Shih
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13
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Chest X-Ray Images to Differentiate COVID-19 from Pneumonia with Artificial Intelligence Techniques. Int J Biomed Imaging 2022; 2022:5318447. [PMID: 36588667 PMCID: PMC9800093 DOI: 10.1155/2022/5318447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Revised: 11/05/2022] [Accepted: 11/29/2022] [Indexed: 12/24/2022] Open
Abstract
This paper presents an automated and noninvasive technique to discriminate COVID-19 patients from pneumonia patients using chest X-ray images and artificial intelligence. The reverse transcription-polymerase chain reaction (RT-PCR) test is commonly administered to detect COVID-19. However, the RT-PCR test necessitates person-to-person contact to administer, requires variable time to produce results, and is expensive. Moreover, this test is still unreachable to the significant global population. The chest X-ray images can play an important role here as the X-ray machines are commonly available at any healthcare facility. However, the chest X-ray images of COVID-19 and viral pneumonia patients are very similar and often lead to misdiagnosis subjectively. This investigation has employed two algorithms to solve this problem objectively. One algorithm uses lower-dimension encoded features extracted from the X-ray images and applies them to the machine learning algorithms for final classification. The other algorithm relies on the inbuilt feature extractor network to extract features from the X-ray images and classifies them with a pretrained deep neural network VGG16. The simulation results show that the proposed two algorithms can extricate COVID-19 patients from pneumonia with the best accuracy of 100% and 98.1%, employing VGG16 and the machine learning algorithm, respectively. The performances of these two algorithms have also been collated with those of other existing state-of-the-art methods.
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14
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Dubey AK, Mohbey KK. Combined Cloud-Based Inference System for the Classification of COVID-19 in CT-Scan and X-Ray Images. NEW GENERATION COMPUTING 2022; 41:61-84. [PMID: 36439302 PMCID: PMC9676871 DOI: 10.1007/s00354-022-00195-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/29/2022] [Accepted: 11/09/2022] [Indexed: 06/16/2023]
Abstract
In the past few years, most of the work has been done around the classification of covid-19 using different images like CT-scan, X-ray, and ultrasound. But none of that is capable enough to deal with each of these image types on a single common platform and can identify the possibility that a person is suffering from COVID or not. Thus, we realized there should be a platform to identify COVID-19 in CT-scan and X-ray images on the fly. So, to fulfill this need, we proposed an AI model to identify CT-scan and X-ray images from each other and then use this inference to classify them of COVID positive or negative. The proposed model uses the inception architecture under the hood and trains on the open-source extended covid-19 dataset. The dataset consists of plenty of images for both image types and is of size 4 GB. We achieved an accuracy of 100%, average macro-Precision of 100%, average macro-Recall of 100%, average macro f1-score of 100%, and AUC score of 99.6%. Furthermore, in this work, cloud-based architecture is proposed to massively scale and load balance as the Number of user requests rises. As a result, it will deliver a service with minimal latency to all users.
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Affiliation(s)
- Ankit Kumar Dubey
- Department of Computer Science, Central University of Rajasthan, Ajmer, India
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15
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Gulakala R, Markert B, Stoffel M. Generative adversarial network based data augmentation for CNN based detection of Covid-19. Sci Rep 2022; 12:19186. [PMID: 36357530 PMCID: PMC9647771 DOI: 10.1038/s41598-022-23692-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Accepted: 11/03/2022] [Indexed: 11/11/2022] Open
Abstract
Covid-19 has been a global concern since 2019, crippling the world economy and health. Biological diagnostic tools have since been developed to identify the virus from bodily fluids and since the virus causes pneumonia, which results in lung inflammation, the presence of the virus can also be detected using medical imaging by expert radiologists. The success of each diagnostic method is measured by the hit rate for identifying Covid infections. However, the access for people to each diagnosis tool can be limited, depending on the geographic region and, since Covid treatment denotes a race against time, the diagnosis duration plays an important role. Hospitals with X-ray opportunities are widely distributed all over the world, so a method investigating lung X-ray images for possible Covid-19 infections would offer itself. Promising results have been achieved in the literature in automatically detecting the virus using medical images like CT scans and X-rays using supervised artificial neural network algorithms. One of the major drawbacks of supervised learning models is that they require enormous amounts of data to train, and generalize on new data. In this study, we develop a Swish activated, Instance and Batch normalized Residual U-Net GAN with dense blocks and skip connections to create synthetic and augmented data for training. The proposed GAN architecture, due to the presence of instance normalization and swish activation, can deal with the randomness of luminosity, that arises due to different sources of X-ray images better than the classical architecture and generate realistic-looking synthetic data. Also, the radiology equipment is not generally computationally efficient. They cannot efficiently run state-of-the-art deep neural networks such as DenseNet and ResNet effectively. Hence, we propose a novel CNN architecture that is 40% lighter and more accurate than state-of-the-art CNN networks. Multi-class classification of the three classes of chest X-rays (CXR), ie Covid-19, healthy and Pneumonia, is performed using the proposed model which had an extremely high test accuracy of 99.2% which has not been achieved in any previous studies in the literature. Based on the mentioned criteria for developing Corona infection diagnosis, in the present study, an Artificial Intelligence based method is proposed, resulting in a rapid diagnostic tool for Covid infections based on generative adversarial and convolutional neural networks. The benefit will be a high accuracy of lung infection identification with 99% accuracy. This could lead to a support tool that helps in rapid diagnosis, and an accessible Covid identification method using CXR images.
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Affiliation(s)
- Rutwik Gulakala
- grid.1957.a0000 0001 0728 696XInstitute of General Mechanics, RWTH Aachen University, Aachen, Germany
| | - Bernd Markert
- grid.1957.a0000 0001 0728 696XInstitute of General Mechanics, RWTH Aachen University, Aachen, Germany
| | - Marcus Stoffel
- grid.1957.a0000 0001 0728 696XInstitute of General Mechanics, RWTH Aachen University, Aachen, Germany
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16
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COVID-19 Data Analytics Using Extended Convolutional Technique. Interdiscip Perspect Infect Dis 2022; 2022:4578838. [DOI: 10.1155/2022/4578838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Revised: 10/25/2022] [Accepted: 10/27/2022] [Indexed: 11/09/2022] Open
Abstract
The healthcare system, lifestyle, industrial growth, economy, and livelihood of human beings worldwide were affected due to the triggered global pandemic by the COVID-19 virus that originated and was first reported in Wuhan city, Republic Country of China. COVID cases are difficult to predict and detect in their early stages, and their spread and mortality are uncontrollable. The reverse transcription polymerase chain reaction (RT-PCR) is still the first and foremost diagnostical methodology accepted worldwide; hence, it creates a scope of new diagnostic tools and techniques of detection approach which can produce effective and faster results compared with its predecessor. Innovational through current studies that complement the existence of the novel coronavirus (COVID-19) to findings in the thorax (chest) X-ray imaging, the projected research’s method makes use of present deep learning (DL) models with the integration of various frameworks such as GoogleNet, U-Net, and ResNet50 to novel method those X-ray images and categorize patients as the corona positive (COVID + ve) or the corona negative (COVID -ve). The anticipated technique entails the pretreatment phase through dissection of the lung, getting rid of the environment which does now no longer provide applicable facts and can provide influenced consequences; then after this, the preliminary degree comes up with the category version educated below the switch mastering system; and in conclusion, consequences are evaluated and interpreted through warmth maps visualization. The proposed research method completed a detection accuracy of COVID-19 at around 99%.
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17
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Alturki R, Alharbi M, AlAnzi F, Albahli S. Deep learning techniques for detecting and recognizing face masks: A survey. Front Public Health 2022; 10:955332. [PMID: 36225777 PMCID: PMC9548692 DOI: 10.3389/fpubh.2022.955332] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2022] [Accepted: 08/31/2022] [Indexed: 01/24/2023] Open
Abstract
The year 2020 brought many changes to the lives of people all over the world with the outbreak of COVID-19; we saw lockdowns for months and deaths of many individuals, which set the world economy back miles. As research was conducted to create vaccines and cures that would eradicate the virus, precautionary measures were imposed on people to help reduce the spread the disease. These measures included washing of hands, appropriate distancing in social gatherings and wearing of masks to cover the face and nose. But due to human error, most people failed to adhere to this face mask rule and this could be monitored using artificial intelligence. In this work, we carried out a survey on Masked Face Recognition (MFR) and Occluded Face Recognition (OFR) deep learning techniques used to detect whether a face mask was being worn. The major problem faced by these models is that people often wear face masks incorrectly, either not covering the nose or mouth, which is equivalent to not wearing it at all. The deep learning algorithms detected the covered features on the face to ensure that the correct parts of the face were covered and had amazingly effective results.
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Affiliation(s)
- Rahaf Alturki
- Department of Information Technology, College of Computer, Qassim University, Buraydah, Saudi Arabia
| | - Maali Alharbi
- Department of Information Technology, College of Computer, Qassim University, Buraydah, Saudi Arabia
| | - Ftoon AlAnzi
- Department of Information Technology, College of Computer, Qassim University, Buraydah, Saudi Arabia
| | - Saleh Albahli
- Department of Information Technology, College of Computer, Qassim University, Buraydah, Saudi Arabia
- Department of Computer Science, Kent State University, Kent, OH, United States
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18
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Hamza A, Attique Khan M, Wang SH, Alqahtani A, Alsubai S, Binbusayyis A, Hussein HS, Martinetz TM, Alshazly H. COVID-19 classification using chest X-ray images: A framework of CNN-LSTM and improved max value moth flame optimization. Front Public Health 2022; 10:948205. [PMID: 36111186 PMCID: PMC9468600 DOI: 10.3389/fpubh.2022.948205] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Accepted: 08/01/2022] [Indexed: 01/21/2023] Open
Abstract
Coronavirus disease 2019 (COVID-19) is a highly contagious disease that has claimed the lives of millions of people worldwide in the last 2 years. Because of the disease's rapid spread, it is critical to diagnose it at an early stage in order to reduce the rate of spread. The images of the lungs are used to diagnose this infection. In the last 2 years, many studies have been introduced to help with the diagnosis of COVID-19 from chest X-Ray images. Because all researchers are looking for a quick method to diagnose this virus, deep learning-based computer controlled techniques are more suitable as a second opinion for radiologists. In this article, we look at the issue of multisource fusion and redundant features. We proposed a CNN-LSTM and improved max value features optimization framework for COVID-19 classification to address these issues. The original images are acquired and the contrast is increased using a combination of filtering algorithms in the proposed architecture. The dataset is then augmented to increase its size, which is then used to train two deep learning networks called Modified EfficientNet B0 and CNN-LSTM. Both networks are built from scratch and extract information from the deep layers. Following the extraction of features, the serial based maximum value fusion technique is proposed to combine the best information of both deep models. However, a few redundant information is also noted; therefore, an improved max value based moth flame optimization algorithm is proposed. Through this algorithm, the best features are selected and finally classified through machine learning classifiers. The experimental process was conducted on three publically available datasets and achieved improved accuracy than the existing techniques. Moreover, the classifiers based comparison is also conducted and the cubic support vector machine gives better accuracy.
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Affiliation(s)
- Ameer Hamza
- Department of Computer Science, HITEC University, Taxila, Pakistan
| | - Muhammad Attique Khan
- Department of Computer Science, HITEC University, Taxila, Pakistan,*Correspondence: Muhammad Attique Khan
| | - Shui-Hua Wang
- Department of Mathematics, University of Leicester, Leicester, United Kingdom
| | - Abdullah Alqahtani
- College of Computer Engineering and Sciences, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Shtwai Alsubai
- College of Computer Engineering and Sciences, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Adel Binbusayyis
- College of Computer Engineering and Sciences, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Hany S. Hussein
- Department of Electrical Engineering, College of Engineering, King Khalid University, Abha, Saudi Arabia,Department of Electrical Engineering, Faculty of Engineering, Aswan University, Aswan, Egypt
| | | | - Hammam Alshazly
- Faculty of Computers and Information, South Valley University, Qena, Egypt
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19
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Phong LT. Secure deep learning for distributed data against maliciouscentral server. PLoS One 2022; 17:e0272423. [PMID: 35913921 PMCID: PMC9342767 DOI: 10.1371/journal.pone.0272423] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Accepted: 07/19/2022] [Indexed: 11/18/2022] Open
Abstract
In this paper, we propose a secure system for performing deep learning with distributed trainers connected to a central parameter server. Our system has the following two distinct features: (1) the distributed trainers can detect malicious activities in the server; (2) the distributed trainers can perform both vertical and horizontal neural network training. In the experiments, we apply our system to medical data including magnetic resonance and X-ray images and obtain approximate or even better area-under-the-curve scores when compared to the existing scores.
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Affiliation(s)
- Le Trieu Phong
- National Institute of Information and Communications Technology (NICT), Koganei, Tokyo, Japan
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20
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Pandey SK, Mohanta GC, Kumar V, Gupta K. Diagnostic Tools for Rapid Screening and Detection of SARS-CoV-2 Infection. Vaccines (Basel) 2022; 10:1200. [PMID: 36016088 PMCID: PMC9414050 DOI: 10.3390/vaccines10081200] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 07/19/2022] [Accepted: 07/25/2022] [Indexed: 12/11/2022] Open
Abstract
The novel coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has severely impacted human health and the health management system globally. The ongoing pandemic has required the development of more effective diagnostic strategies for restricting deadly disease. For appropriate disease management, accurate and rapid screening and isolation of the affected population is an efficient means of containment and the decimation of the disease. Therefore, considerable efforts are being directed toward the development of rapid and robust diagnostic techniques for respiratory infections, including SARS-CoV-2. In this article, we have summarized the origin, transmission, and various diagnostic techniques utilized for the detection of the SARS-CoV-2 virus. These higher-end techniques can also detect the virus copy number in asymptomatic samples. Furthermore, emerging rapid, cost-effective, and point-of-care diagnostic devices capable of large-scale population screening for COVID-19 are discussed. Finally, some breakthrough developments based on spectroscopic diagnosis that could revolutionize the field of rapid diagnosis are discussed.
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Affiliation(s)
- Satish Kumar Pandey
- Department of Biotechnology, School of Life Sciences, Mizoram University (Central University), Aizawl 796004, India
| | - Girish C. Mohanta
- Materials Science and Sensor Applications, CSIR-Central Scientific Instruments Organisation (CSIR-CSIO), Chandigarh 160030, India;
| | - Vinod Kumar
- Department of Dermatology, Venerology and Leprology, Post Graduate Institute of Medical Education & Research, Chandigarh 160012, India;
| | - Kuldeep Gupta
- Russel H. Morgan, Department of Radiology and Radiological Sciences, School of Medicine, Johns Hopkins University, Baltimore, MD 21287, USA
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21
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Suganyadevi S, Seethalakshmi V. CVD-HNet: Classifying Pneumonia and COVID-19 in Chest X-ray Images Using Deep Network. WIRELESS PERSONAL COMMUNICATIONS 2022; 126:3279-3303. [PMID: 35756172 PMCID: PMC9206838 DOI: 10.1007/s11277-022-09864-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 05/29/2022] [Indexed: 06/04/2023]
Abstract
The use of computer-assisted analysis to improve image interpretation has been a long-standing challenge in the medical imaging industry. In terms of image comprehension, Continuous advances in AI (Artificial Intelligence), predominantly in DL (Deep Learning) techniques, are supporting in the classification, Detection, and quantification of anomalies in medical images. DL techniques are the most rapidly evolving branch of AI, and it's recently been successfully pragmatic in a variety of fields, including medicine. This paper provides a classification method for COVID 19 infected X-ray images based on new novel deep CNN model. For COVID19 specified pneumonia analysis, two new customized CNN architectures, CVD-HNet1 (COVID-HybridNetwork1) and CVD-HNet2 (COVID-HybridNetwork2), have been designed. The suggested method utilizes operations based on boundaries and regions, as well as convolution processes, in a systematic manner. In comparison to existing CNNs, the suggested classification method achieves excellent Accuracy 98 percent, F Score 0.99 and MCC 0.97. These results indicate impressive classification accuracy on a limited dataset, with more training examples, much better results can be achieved. Overall, our CVD-HNet model could be a useful tool for radiologists in diagnosing and detecting COVID 19 instances early.
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Affiliation(s)
- S. Suganyadevi
- Department of Electronics and Communication Engineering, KPR Institute of Engineering and Technology, Coimbatore, Tamilnadu 641 407 India
| | - V. Seethalakshmi
- Department of Electronics and Communication Engineering, KPR Institute of Engineering and Technology, Coimbatore, Tamilnadu 641 407 India
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22
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Sri Kavya N, Shilpa T, Veeranjaneyulu N, Divya Priya D. Detecting Covid19 and pneumonia from chest X-ray images using deep convolutional neural networks. MATERIALS TODAY. PROCEEDINGS 2022; 64:737-743. [PMID: 35607444 PMCID: PMC9117408 DOI: 10.1016/j.matpr.2022.05.199] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
With the current COVID19 pandemic, we have to weigh human life, prosperity, and value, while implicitly acknowledging that controlling case spread and mortality is a challenge. Identifying COVID19-infected patients and disconnecting them to avoid COVID transmission is one of the most difficult tasks for clinicians. As a result, figuring out who infected with covid19 is crucial. COVID19 is identified using a 4-6-hour reverse transcription-polymerase chain reaction (RT-PCR). Another way to detect Coronavirus early in the disease process is by using chest X-rays (CXR).We extracted characteristics from chest X-ray images using VGG16 and ResNet50 deep learning algorithms, then classified them into three groups: viral pneumonia, normal, and COVID19. We ran 15,153 images through the models to see how accurate they were in real-world situations. For detecting COVID19 cases, the VGG16 model has an average accuracy of 89.34 %, whereas ResNet50 has an accuracy of 91.39 %. When utilizing deep learning to identify COVID19, however, a larger dataset is necessary. It has the desired effect of detecting situations accurately.
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Affiliation(s)
- Nallamothu Sri Kavya
- Department of IT, Vignan's Foundation for Science, Technology and Research (Deemed to be University), Vadlamudi, Guntur, Andhra Pradesh, India
| | - Thotapalli Shilpa
- Department of IT, Vignan's Foundation for Science, Technology and Research (Deemed to be University), Vadlamudi, Guntur, Andhra Pradesh, India
| | - N Veeranjaneyulu
- Department of IT, Vignan's Foundation for Science, Technology and Research (Deemed to be University), Vadlamudi, Guntur, Andhra Pradesh, India
| | - D Divya Priya
- Department of Computer Science and Engineering, MLR Institute of Technology, Hyderabad, India
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23
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Saleem F, AL-Ghamdi ASALM, Alassafi MO, AlGhamdi SA. Machine Learning, Deep Learning, and Mathematical Models to Analyze Forecasting and Epidemiology of COVID-19: A Systematic Literature Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:5099. [PMID: 35564493 PMCID: PMC9099605 DOI: 10.3390/ijerph19095099] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Revised: 04/11/2022] [Accepted: 04/20/2022] [Indexed: 01/27/2023]
Abstract
COVID-19 is a disease caused by SARS-CoV-2 and has been declared a worldwide pandemic by the World Health Organization due to its rapid spread. Since the first case was identified in Wuhan, China, the battle against this deadly disease started and has disrupted almost every field of life. Medical staff and laboratories are leading from the front, but researchers from various fields and governmental agencies have also proposed healthy ideas to protect each other. In this article, a Systematic Literature Review (SLR) is presented to highlight the latest developments in analyzing the COVID-19 data using machine learning and deep learning algorithms. The number of studies related to Machine Learning (ML), Deep Learning (DL), and mathematical models discussed in this research has shown a significant impact on forecasting and the spread of COVID-19. The results and discussion presented in this study are based on the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines. Out of 218 articles selected at the first stage, 57 met the criteria and were included in the review process. The findings are therefore associated with those 57 studies, which recorded that CNN (DL) and SVM (ML) are the most used algorithms for forecasting, classification, and automatic detection. The importance of the compartmental models discussed is that the models are useful for measuring the epidemiological features of COVID-19. Current findings suggest that it will take around 1.7 to 140 days for the epidemic to double in size based on the selected studies. The 12 estimates for the basic reproduction range from 0 to 7.1. The main purpose of this research is to illustrate the use of ML, DL, and mathematical models that can be helpful for the researchers to generate valuable solutions for higher authorities and the healthcare industry to reduce the impact of this epidemic.
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Affiliation(s)
- Farrukh Saleem
- Department of Information System, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
| | - Abdullah Saad AL-Malaise AL-Ghamdi
- Department of Information System, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
| | - Madini O. Alassafi
- Department of Information Technology, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
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24
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Garibaldi-Márquez F, Flores G, Mercado-Ravell DA, Ramírez-Pedraza A, Valentín-Coronado LM. Weed Classification from Natural Corn Field-Multi-Plant Images Based on Shallow and Deep Learning. SENSORS (BASEL, SWITZERLAND) 2022; 22:3021. [PMID: 35459006 PMCID: PMC9032669 DOI: 10.3390/s22083021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Revised: 04/09/2022] [Accepted: 04/11/2022] [Indexed: 06/14/2023]
Abstract
Crop and weed discrimination in natural field environments is still challenging for implementing automatic agricultural practices, such as weed control. Some weed control methods have been proposed. However, these methods are still restricted as they are implemented under controlled conditions. The development of a sound weed control system begins by recognizing the crop and the different weed plants presented in the field. In this work, a classification approach of Zea mays L. (Crop), narrow-leaf weeds (NLW), and broadleaf weeds (BLW) from multi-plant images are presented. Moreover, a large image dataset was generated. Images were captured in natural field conditions, in different locations, and growing stages of the plants. The extraction of regions of interest (ROI) is carried out employing connected component analysis (CCA), whereas the classification of ROIs is based on Convolutional Neural Networks (CNN) and compared with a shallow learning approach. To measure the classification performance of both methods, accuracy, precision, recall, and F1-score metrics were used. The best alternative for the weed classification task at early stages of growth and in natural corn field environments was the CNN-based approach, as indicated by the 97% accuracy value obtained.
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Affiliation(s)
- Francisco Garibaldi-Márquez
- Centro de Investigaciones en Óptica A.C., Loma del Bosque 115, Leon 37150, Guanajuato, Mexico; (F.G.-M.); (G.F.); (A.R.-P.)
- Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias—Campo Experimental Pabellón, Pabellon de Arteaga 20671, Aguascalientes, Mexico
| | - Gerardo Flores
- Centro de Investigaciones en Óptica A.C., Loma del Bosque 115, Leon 37150, Guanajuato, Mexico; (F.G.-M.); (G.F.); (A.R.-P.)
| | - Diego A. Mercado-Ravell
- Centro de Investigación en Matemáticas A.C., Lasec y Andador Galileo Galilei, Quantum Ciudad del Conocimiento, Zacatecas 98160, Zacatecas, Mexico;
- Consejo Nacional de Ciencia y Tecnología, Ciudad de Mexico 03940, Mexico
| | - Alfonso Ramírez-Pedraza
- Centro de Investigaciones en Óptica A.C., Loma del Bosque 115, Leon 37150, Guanajuato, Mexico; (F.G.-M.); (G.F.); (A.R.-P.)
- Consejo Nacional de Ciencia y Tecnología, Ciudad de Mexico 03940, Mexico
| | - Luis M. Valentín-Coronado
- Centro de Investigaciones en Óptica A.C., Loma del Bosque 115, Leon 37150, Guanajuato, Mexico; (F.G.-M.); (G.F.); (A.R.-P.)
- Consejo Nacional de Ciencia y Tecnología, Ciudad de Mexico 03940, Mexico
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