1
|
Eckmann S, Young EJ, Gjorgjieva J. Synapse-type-specific competitive Hebbian learning forms functional recurrent networks. Proc Natl Acad Sci U S A 2024; 121:e2305326121. [PMID: 38870059 PMCID: PMC11194505 DOI: 10.1073/pnas.2305326121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Accepted: 04/25/2024] [Indexed: 06/15/2024] Open
Abstract
Cortical networks exhibit complex stimulus-response patterns that are based on specific recurrent interactions between neurons. For example, the balance between excitatory and inhibitory currents has been identified as a central component of cortical computations. However, it remains unclear how the required synaptic connectivity can emerge in developing circuits where synapses between excitatory and inhibitory neurons are simultaneously plastic. Using theory and modeling, we propose that a wide range of cortical response properties can arise from a single plasticity paradigm that acts simultaneously at all excitatory and inhibitory connections-Hebbian learning that is stabilized by the synapse-type-specific competition for a limited supply of synaptic resources. In plastic recurrent circuits, this competition enables the formation and decorrelation of inhibition-balanced receptive fields. Networks develop an assembly structure with stronger synaptic connections between similarly tuned excitatory and inhibitory neurons and exhibit response normalization and orientation-specific center-surround suppression, reflecting the stimulus statistics during training. These results demonstrate how neurons can self-organize into functional networks and suggest an essential role for synapse-type-specific competitive learning in the development of cortical circuits.
Collapse
Affiliation(s)
- Samuel Eckmann
- Computation in Neural Circuits Group, Max Planck Institute for Brain Research, Frankfurt am Main60438, Germany
- Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, CambridgeCB2 1PZ, United Kingdom
| | - Edward James Young
- Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, CambridgeCB2 1PZ, United Kingdom
| | - Julijana Gjorgjieva
- Computation in Neural Circuits Group, Max Planck Institute for Brain Research, Frankfurt am Main60438, Germany
- School of Life Sciences, Technical University Munich, Freising85354, Germany
| |
Collapse
|
2
|
Thomas CI, Ryan MA, McNabb MC, Kamasawa N, Scholl B. Astrocyte coverage of excitatory synapses correlates to measures of synapse structure and function in ferret primary visual cortex. Glia 2024. [PMID: 38856149 DOI: 10.1002/glia.24582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 05/25/2024] [Accepted: 06/02/2024] [Indexed: 06/11/2024]
Abstract
Most excitatory synapses in the mammalian brain are contacted or ensheathed by astrocyte processes, forming tripartite synapses. Astrocytes are thought to be critical regulators of the structural and functional dynamics of synapses. While the degree of synaptic coverage by astrocytes is known to vary across brain regions and animal species, the reason for and implications of this variability remains unknown. Further, how astrocyte coverage of synapses relates to in vivo functional properties of individual synapses has not been investigated. Here, we characterized astrocyte coverage of synapses of pyramidal neurons in the ferret visual cortex and, using correlative light and electron microscopy, examined their relationship to synaptic strength and sensory-evoked Ca2+ activity. Nearly, all synapses were contacted by astrocytes, and most were contacted along the axon-spine interface. Structurally, we found that the degree of synaptic astrocyte coverage directly scaled with synapse size and postsynaptic density complexity. Functionally, we found that the amount of astrocyte coverage scaled with how selectively a synapse responds to a particular visual stimulus and, at least for the largest synapses, scaled with the reliability of visual stimuli to evoke postsynaptic Ca2+ events. Our study shows astrocyte coverage is highly correlated with structural metrics of synaptic strength of excitatory synapses in the visual cortex and demonstrates a previously unknown relationship between astrocyte coverage and reliable sensory activation.
Collapse
Affiliation(s)
- Connon I Thomas
- Electron Microscopy Core Facility, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA
| | - Melissa A Ryan
- Electron Microscopy Core Facility, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA
| | - Micaiah C McNabb
- Electron Microscopy Core Facility, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA
| | - Naomi Kamasawa
- Electron Microscopy Core Facility, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA
| | - Benjamin Scholl
- Department of Physiology and Biophysics, University of Colorado Denver, Aurora, Colorado, USA
| |
Collapse
|
3
|
DePiero VJ, Deng Z, Chen C, Savier EL, Chen H, Wei W, Cang J. Transformation of Motion Pattern Selectivity from Retina to Superior Colliculus. J Neurosci 2024; 44:e1704232024. [PMID: 38569924 PMCID: PMC11097260 DOI: 10.1523/jneurosci.1704-23.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 03/07/2024] [Accepted: 03/26/2024] [Indexed: 04/05/2024] Open
Abstract
The superior colliculus (SC) is a prominent and conserved visual center in all vertebrates. In mice, the most superficial lamina of the SC is enriched with neurons that are selective for the moving direction of visual stimuli. Here, we study how these direction selective neurons respond to complex motion patterns known as plaids, using two-photon calcium imaging in awake male and female mice. The plaid pattern consists of two superimposed sinusoidal gratings moving in different directions, giving an apparent pattern direction that lies between the directions of the two component gratings. Most direction selective neurons in the mouse SC respond robustly to the plaids and show a high selectivity for the moving direction of the plaid pattern but not of its components. Pattern motion selectivity is seen in both excitatory and inhibitory SC neurons and is especially prevalent in response to plaids with large cross angles between the two component gratings. However, retinal inputs to the SC are ambiguous in their selectivity to pattern versus component motion. Modeling suggests that pattern motion selectivity in the SC can arise from a nonlinear transformation of converging retinal inputs. In contrast, the prevalence of pattern motion selective neurons is not seen in the primary visual cortex (V1). These results demonstrate an interesting difference between the SC and V1 in motion processing and reveal the SC as an important site for encoding pattern motion.
Collapse
Affiliation(s)
- Victor J DePiero
- Department of Biology, University of Virginia, Charlottesville, Virginia 22904
- Department of Psychology, University of Virginia, Charlottesville, Virginia 22904
| | - Zixuan Deng
- Committee on Neurobiology, University of Chicago, Chicago, Illinois 60637
| | - Chen Chen
- Department of Psychology, University of Virginia, Charlottesville, Virginia 22904
| | - Elise L Savier
- Department of Biology, University of Virginia, Charlottesville, Virginia 22904
- Department of Physiology, University of Michigan, Ann Arbor, Michigan 48109
| | - Hui Chen
- Department of Biology, University of Virginia, Charlottesville, Virginia 22904
- Department of Psychology, University of Virginia, Charlottesville, Virginia 22904
| | - Wei Wei
- Department of Neurobiology, Neuroscience Institute, University of Chicago, Chicago, Illinois 60637
| | - Jianhua Cang
- Department of Biology, University of Virginia, Charlottesville, Virginia 22904
- Department of Psychology, University of Virginia, Charlottesville, Virginia 22904
| |
Collapse
|
4
|
Znamenskiy P, Kim MH, Muir DR, Iacaruso MF, Hofer SB, Mrsic-Flogel TD. Functional specificity of recurrent inhibition in visual cortex. Neuron 2024; 112:991-1000.e8. [PMID: 38244539 DOI: 10.1016/j.neuron.2023.12.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 10/31/2023] [Accepted: 12/19/2023] [Indexed: 01/22/2024]
Abstract
In the neocortex, neural activity is shaped by the interaction of excitatory and inhibitory neurons, defined by the organization of their synaptic connections. Although connections among excitatory pyramidal neurons are sparse and functionally tuned, inhibitory connectivity is thought to be dense and largely unstructured. By measuring in vivo visual responses and synaptic connectivity of parvalbumin-expressing (PV+) inhibitory cells in mouse primary visual cortex, we show that the synaptic weights of their connections to nearby pyramidal neurons are specifically tuned according to the similarity of the cells' responses. Individual PV+ cells strongly inhibit those pyramidal cells that provide them with strong excitation and share their visual selectivity. This structured organization of inhibitory synaptic weights provides a circuit mechanism for tuned inhibition onto pyramidal cells despite dense connectivity, stabilizing activity within feature-specific excitatory ensembles while supporting competition between them.
Collapse
Affiliation(s)
- Petr Znamenskiy
- Specification and Function of Neural Circuits Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK; Sainsbury Wellcome Centre, 25 Howland Street, London W1T 4JG, UK; Biozentrum, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland.
| | - Mean-Hwan Kim
- Biozentrum, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland
| | - Dylan R Muir
- Biozentrum, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland
| | | | - Sonja B Hofer
- Sainsbury Wellcome Centre, 25 Howland Street, London W1T 4JG, UK; Biozentrum, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland
| | - Thomas D Mrsic-Flogel
- Sainsbury Wellcome Centre, 25 Howland Street, London W1T 4JG, UK; Biozentrum, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland.
| |
Collapse
|
5
|
Ouelhazi A, Bharmauria V, Molotchnikoff S. Adaptation-induced sharpening of orientation tuning curves in the mouse visual cortex. Neuroreport 2024; 35:291-298. [PMID: 38407865 DOI: 10.1097/wnr.0000000000002012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2024]
Abstract
OBJECTIVE Orientation selectivity is an emergent property of visual neurons across species with columnar and noncolumnar organization of the visual cortex. The emergence of orientation selectivity is more established in columnar cortical areas than in noncolumnar ones. Thus, how does orientation selectivity emerge in noncolumnar cortical areas after an adaptation protocol? Adaptation refers to the constant presentation of a nonoptimal stimulus (adapter) to a neuron under observation for a specific time. Previously, it had been shown that adaptation has varying effects on the tuning properties of neurons, such as orientation, spatial frequency, motion and so on. BASIC METHODS We recorded the mouse primary visual neurons (V1) at different orientations in the control (preadaptation) condition. This was followed by adapting neurons uninterruptedly for 12 min and then recording the same neurons postadaptation. An orientation selectivity index (OSI) for neurons was computed to compare them pre- and post-adaptation. MAIN RESULTS We show that 12-min adaptation increases the OSI of visual neurons ( n = 113), that is, sharpens their tuning. Moreover, the OSI postadaptation increases linearly as a function of the OSI preadaptation. CONCLUSION The increased OSI postadaptation may result from a specific dendritic neural mechanism, potentially facilitating the rapid learning of novel features.
Collapse
Affiliation(s)
- Afef Ouelhazi
- Département de Sciences Biologiques, Neurophysiology of the Visual system, Université de Montréal, Montréal, Québec
| | - Vishal Bharmauria
- Department of Psychology, Centre for Vision Research and Vision: Science to Applications (VISTA) Program, York University, Toronto, Ontario, Canada
| | - Stéphane Molotchnikoff
- Département de Sciences Biologiques, Neurophysiology of the Visual system, Université de Montréal, Montréal, Québec
| |
Collapse
|
6
|
Cazemier JL, Haak R, Tran TKL, Hsu ATY, Husic M, Peri BD, Kirchberger L, Self MW, Roelfsema P, Heimel JA. Involvement of superior colliculus in complex figure detection of mice. eLife 2024; 13:e83708. [PMID: 38270590 PMCID: PMC10810606 DOI: 10.7554/elife.83708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 01/08/2024] [Indexed: 01/26/2024] Open
Abstract
Object detection is an essential function of the visual system. Although the visual cortex plays an important role in object detection, the superior colliculus can support detection when the visual cortex is ablated or silenced. Moreover, it has been shown that superficial layers of mouse SC (sSC) encode visual features of complex objects, and that this code is not inherited from the primary visual cortex. This suggests that mouse sSC may provide a significant contribution to complex object vision. Here, we use optogenetics to show that mouse sSC is involved in figure detection based on differences in figure contrast, orientation, and phase. Additionally, our neural recordings show that in mouse sSC, image elements that belong to a figure elicit stronger activity than those same elements when they are part of the background. The discriminability of this neural code is higher for correct trials than for incorrect trials. Our results provide new insight into the behavioral relevance of the visual processing that takes place in sSC.
Collapse
Affiliation(s)
- J Leonie Cazemier
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Robin Haak
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - TK Loan Tran
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Ann TY Hsu
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Medina Husic
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Brandon D Peri
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Lisa Kirchberger
- Department of Vision and Cognition, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Matthew W Self
- Department of Vision and Cognition, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| | - Pieter Roelfsema
- Department of Vision and Cognition, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
- Department of Integrative Neurophysiology, VU UniversityAmsterdamNetherlands
- Department of Psychiatry, Academic Medical CentreAmsterdamNetherlands
- Laboratory of Visual Brain Therapy, Sorbonne Université, Institut National de la Santé et de la Recherche Médicale, Centre National de la Recherche Scientifique, Institut de la VisionParisFrance
| | - J Alexander Heimel
- Department of Circuits, Structure & Function, The Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences (KNAW)AmsterdamNetherlands
| |
Collapse
|
7
|
Bernáez Timón L, Ekelmans P, Kraynyukova N, Rose T, Busse L, Tchumatchenko T. How to incorporate biological insights into network models and why it matters. J Physiol 2023; 601:3037-3053. [PMID: 36069408 DOI: 10.1113/jp282755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Accepted: 08/24/2022] [Indexed: 11/08/2022] Open
Abstract
Due to the staggering complexity of the brain and its neural circuitry, neuroscientists rely on the analysis of mathematical models to elucidate its function. From Hodgkin and Huxley's detailed description of the action potential in 1952 to today, new theories and increasing computational power have opened up novel avenues to study how neural circuits implement the computations that underlie behaviour. Computational neuroscientists have developed many models of neural circuits that differ in complexity, biological realism or emergent network properties. With recent advances in experimental techniques for detailed anatomical reconstructions or large-scale activity recordings, rich biological data have become more available. The challenge when building network models is to reflect experimental results, either through a high level of detail or by finding an appropriate level of abstraction. Meanwhile, machine learning has facilitated the development of artificial neural networks, which are trained to perform specific tasks. While they have proven successful at achieving task-oriented behaviour, they are often abstract constructs that differ in many features from the physiology of brain circuits. Thus, it is unclear whether the mechanisms underlying computation in biological circuits can be investigated by analysing artificial networks that accomplish the same function but differ in their mechanisms. Here, we argue that building biologically realistic network models is crucial to establishing causal relationships between neurons, synapses, circuits and behaviour. More specifically, we advocate for network models that consider the connectivity structure and the recorded activity dynamics while evaluating task performance.
Collapse
Affiliation(s)
- Laura Bernáez Timón
- Institute for Physiological Chemistry, University of Mainz Medical Center, Mainz, Germany
| | - Pierre Ekelmans
- Frankfurt Institute for Advanced Studies, Frankfurt, Germany
| | - Nataliya Kraynyukova
- Institute of Experimental Epileptology and Cognition Research, University of Bonn Medical Center, Bonn, Germany
| | - Tobias Rose
- Institute of Experimental Epileptology and Cognition Research, University of Bonn Medical Center, Bonn, Germany
| | - Laura Busse
- Division of Neurobiology, Faculty of Biology, LMU Munich, Munich, Germany
- Bernstein Center for Computational Neuroscience, Munich, Germany
| | - Tatjana Tchumatchenko
- Institute for Physiological Chemistry, University of Mainz Medical Center, Mainz, Germany
- Institute of Experimental Epileptology and Cognition Research, University of Bonn Medical Center, Bonn, Germany
| |
Collapse
|
8
|
Ekelmans P, Kraynyukovas N, Tchumatchenko T. Targeting operational regimes of interest in recurrent neural networks. PLoS Comput Biol 2023; 19:e1011097. [PMID: 37186668 DOI: 10.1371/journal.pcbi.1011097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Revised: 05/25/2023] [Accepted: 04/11/2023] [Indexed: 05/17/2023] Open
Abstract
Neural computations emerge from local recurrent neural circuits or computational units such as cortical columns that comprise hundreds to a few thousand neurons. Continuous progress in connectomics, electrophysiology, and calcium imaging require tractable spiking network models that can consistently incorporate new information about the network structure and reproduce the recorded neural activity features. However, for spiking networks, it is challenging to predict which connectivity configurations and neural properties can generate fundamental operational states and specific experimentally reported nonlinear cortical computations. Theoretical descriptions for the computational state of cortical spiking circuits are diverse, including the balanced state where excitatory and inhibitory inputs balance almost perfectly or the inhibition stabilized state (ISN) where the excitatory part of the circuit is unstable. It remains an open question whether these states can co-exist with experimentally reported nonlinear computations and whether they can be recovered in biologically realistic implementations of spiking networks. Here, we show how to identify spiking network connectivity patterns underlying diverse nonlinear computations such as XOR, bistability, inhibitory stabilization, supersaturation, and persistent activity. We establish a mapping between the stabilized supralinear network (SSN) and spiking activity which allows us to pinpoint the location in parameter space where these activity regimes occur. Notably, we find that biologically-sized spiking networks can have irregular asynchronous activity that does not require strong excitation-inhibition balance or large feedforward input and we show that the dynamic firing rate trajectories in spiking networks can be precisely targeted without error-driven training algorithms.
Collapse
Affiliation(s)
- Pierre Ekelmans
- Theory of Neural Dynamics group, Max Planck Institute for Brain Research, Frankfurt am Main, Germany
- Frankfurt Institute for Advanced Studies, Frankfurt am Main, Germany
| | - Nataliya Kraynyukovas
- Theory of Neural Dynamics group, Max Planck Institute for Brain Research, Frankfurt am Main, Germany
- Institute of Experimental Epileptology and Cognition Research, Life and Brain Center, Universitätsklinikum Bonn, Bonn, Germany
| | - Tatjana Tchumatchenko
- Theory of Neural Dynamics group, Max Planck Institute for Brain Research, Frankfurt am Main, Germany
- Institute of Experimental Epileptology and Cognition Research, Life and Brain Center, Universitätsklinikum Bonn, Bonn, Germany
- Institute of physiological chemistry, Medical center of the Johannes Gutenberg-University Mainz, Mainz, Germany
| |
Collapse
|
9
|
From mechanisms to markers: novel noninvasive EEG proxy markers of the neural excitation and inhibition system in humans. Transl Psychiatry 2022; 12:467. [PMID: 36344497 PMCID: PMC9640647 DOI: 10.1038/s41398-022-02218-z] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Revised: 08/22/2022] [Accepted: 10/06/2022] [Indexed: 11/09/2022] Open
Abstract
Brain function is a product of the balance between excitatory and inhibitory (E/I) brain activity. Variation in the regulation of this activity is thought to give rise to normal variation in human traits, and disruptions are thought to potentially underlie a spectrum of neuropsychiatric conditions (e.g., Autism, Schizophrenia, Downs' Syndrome, intellectual disability). Hypotheses related to E/I dysfunction have the potential to provide cross-diagnostic explanations and to combine genetic and neurological evidence that exists within and between psychiatric conditions. However, the hypothesis has been difficult to test because: (1) it lacks specificity-an E/I dysfunction could pertain to any level in the neural system- neurotransmitters, single neurons/receptors, local networks of neurons, or global brain balance - most researchers do not define the level at which they are examining E/I function; (2) We lack validated methods for assessing E/I function at any of these neural levels in humans. As a result, it has not been possible to reliably or robustly test the E/I hypothesis of psychiatric disorders in a large cohort or longitudinal patient studies. Currently available, in vivo markers of E/I in humans either carry significant risks (e.g., deep brain electrode recordings or using Positron Emission Tomography (PET) with radioactive tracers) and/or are highly restrictive (e.g., limited spatial extent for Transcranial Magnetic Stimulation (TMS) and Magnetic Resonance Spectroscopy (MRS). More recently, a range of novel Electroencephalography (EEG) features has been described, which could serve as proxy markers for E/I at a given level of inference. Thus, in this perspective review, we survey the theories and experimental evidence underlying 6 novel EEG markers and their biological underpinnings at a specific neural level. These cheap-to-record and scalable proxy markers may offer clinical utility for identifying subgroups within and between diagnostic categories, thus directing more tailored sub-grouping and, therefore, treatment strategies. However, we argue that studies in clinical populations are premature. To maximize the potential of prospective EEG markers, we first need to understand the link between underlying E/I mechanisms and measurement techniques.
Collapse
|
10
|
In vivo extracellular recordings of thalamic and cortical visual responses reveal V1 connectivity rules. Proc Natl Acad Sci U S A 2022; 119:e2207032119. [PMID: 36191204 PMCID: PMC9564935 DOI: 10.1073/pnas.2207032119] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
The brain's connectome provides the scaffold for canonical neural computations. However, a comparison of connectivity studies in the mouse primary visual cortex (V1) reveals that the average number and strength of connections between specific neuron types can vary. Can variability in V1 connectivity measurements coexist with canonical neural computations? We developed a theory-driven approach to deduce V1 network connectivity from visual responses in mouse V1 and visual thalamus (dLGN). Our method revealed that the same recorded visual responses were captured by multiple connectivity configurations. Remarkably, the magnitude and selectivity of connectivity weights followed a specific order across most of the inferred connectivity configurations. We argue that this order stems from the specific shapes of the recorded contrast response functions and contrast invariance of orientation tuning. Remarkably, despite variability across connectivity studies, connectivity weights computed from individual published connectivity reports followed the order we identified with our method, suggesting that the relations between the weights, rather than their magnitudes, represent a connectivity motif supporting canonical V1 computations.
Collapse
|
11
|
Corbo J, McClure JP, Erkat OB, Polack PO. Dynamic Distortion of Orientation Representation after Learning in the Mouse Primary Visual Cortex. J Neurosci 2022; 42:4311-4325. [PMID: 35477902 PMCID: PMC9145234 DOI: 10.1523/jneurosci.2272-21.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 01/24/2022] [Accepted: 02/13/2022] [Indexed: 11/21/2022] Open
Abstract
Learning is an essential cognitive mechanism allowing behavioral adaptation through adjustments in neuronal processing. It is associated with changes in the activity of sensory cortical neurons evoked by task-relevant stimuli. However, the exact nature of those modifications and the computational advantages they may confer are still debated. Here, we investigated how learning an orientation discrimination task alters the neuronal representations of the cues orientations in the primary visual cortex (V1) of male and female mice. When comparing the activity evoked by the task stimuli in naive mice and the mice performing the task, we found that the representations of the orientation of the rewarded and nonrewarded cues were more accurate and stable in trained mice. This better cue representation in trained mice was associated with a distortion of the orientation representation space such that stimuli flanking the task-relevant orientations were represented as the task stimuli themselves, suggesting that those stimuli were generalized as the task cues. This distortion was context dependent as it was absent in trained mice passively viewing the task cues and enhanced in the behavioral sessions where mice performed best. Those modifications of the V1 population orientation representation in performing mice were supported by a suppression of the activity of neurons tuned for orientations neighboring the orientations of the task cues. Thus, visual processing in V1 is dynamically adapted to enhance the reliability of the representation of the learned cues and favor generalization in the task-relevant computational space.SIGNIFICANCE STATEMENT Performance improvement in a task often requires facilitating the extraction of the information necessary to its execution. Here, we demonstrate the existence of a suppression mechanism that improves the representation of the orientations of the task stimuli in the V1 of mice performing an orientation discrimination task. We also show that this mechanism distorts the V1 orientation representation space, leading stimuli flanking the task stimuli orientations to be generalized as the task stimuli themselves.
Collapse
Affiliation(s)
- Julien Corbo
- Center for Molecular and Behavioral Neuroscience, Rutgers University-Newark, Newark, New Jersey 07102
| | - John P McClure
- Center for Molecular and Behavioral Neuroscience, Rutgers University-Newark, Newark, New Jersey 07102
- Behavioral and Neural Sciences Graduate Program, Rutgers University-Newark, Newark, New Jersey 07102
| | - O Batuhan Erkat
- Center for Molecular and Behavioral Neuroscience, Rutgers University-Newark, Newark, New Jersey 07102
- Behavioral and Neural Sciences Graduate Program, Rutgers University-Newark, Newark, New Jersey 07102
| | - Pierre-Olivier Polack
- Center for Molecular and Behavioral Neuroscience, Rutgers University-Newark, Newark, New Jersey 07102
| |
Collapse
|
12
|
Feedforward mechanisms of cross-orientation interactions in mouse V1. Neuron 2022; 110:297-311.e4. [PMID: 34735779 PMCID: PMC8920535 DOI: 10.1016/j.neuron.2021.10.017] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 09/03/2021] [Accepted: 10/12/2021] [Indexed: 01/21/2023]
Abstract
Sensory neurons are modulated by context. For example, in mouse primary visual cortex (V1), neuronal responses to the preferred orientation are modulated by the presence of superimposed orientations ("plaids"). The effects of this modulation are diverse; some neurons are suppressed, while others have larger responses to a plaid than its components. We investigated whether this diversity could be explained by a unified circuit mechanism. We report that this masking is maintained during suppression of cortical activity, arguing against cortical mechanisms. Instead, the heterogeneity of plaid responses is explained by an interaction between stimulus geometry and orientation tuning. Highly selective neurons are uniformly suppressed by plaids, whereas the effects in weakly selective neurons depend on the spatial configuration of the stimulus, transitioning systematically between suppression and facilitation. Thus, the diverse responses emerge as a consequence of the spatial structure of feedforward inputs, with no need to invoke cortical interactions.
Collapse
|
13
|
Santos-Mayo A, Moratti S, de Echegaray J, Susi G. A Model of the Early Visual System Based on Parallel Spike-Sequence Detection, Showing Orientation Selectivity. BIOLOGY 2021; 10:biology10080801. [PMID: 34440033 PMCID: PMC8389551 DOI: 10.3390/biology10080801] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Revised: 08/12/2021] [Accepted: 08/16/2021] [Indexed: 12/22/2022]
Abstract
Simple Summary A computational model of primates’ early visual processing, showing orientation selectivity, is presented. The system importantly integrates two key elements: (1) a neuromorphic spike-decoding structure that considerably resembles the circuitry between layers IV and II/III of the primary visual cortex, both in topology and operation; (2) the plasticity of intrinsic excitability, to embed recent findings about the operation of the same area. The model is proposed as a tool for the analysis and reproduction of the orientation selectivity phenomenon, whose underlying neuronal-level computational mechanisms are today the subject of intense scrutiny. In response to rotated Gabor patches the model is able to exhibit realistic orientation tuning curves and to reproduce responses similar to those found in neurophysiological recordings from the primary visual cortex obtained under the same task, considering different stages of the network. This demonstrates its aptness to capture the mechanisms underlying the evoked response in the primary visual cortex. Our tool is available online, and can be expanded to other experiments using a dedicated software library developed by the authors, to elucidate the computational mechanisms underlying orientation selectivity. Abstract Since the first half of the twentieth century, numerous studies have been conducted on how the visual cortex encodes basic image features. One of the hallmarks of basic feature extraction is the phenomenon of orientation selectivity, of which the underlying neuronal-level computational mechanisms remain partially unclear despite being intensively investigated. In this work we present a reduced visual system model (RVSM) of the first level of scene analysis, involving the retina, the lateral geniculate nucleus and the primary visual cortex (V1), showing orientation selectivity. The detection core of the RVSM is the neuromorphic spike-decoding structure MNSD, which is able to learn and recognize parallel spike sequences and considerably resembles the neuronal microcircuits of V1 in both topology and operation. This structure is equipped with plasticity of intrinsic excitability to embed recent findings about V1 operation. The RVSM, which embeds 81 groups of MNSD arranged in 4 oriented columns, is tested using sets of rotated Gabor patches as input. Finally, synthetic visual evoked activity generated by the RVSM is compared with real neurophysiological signal from V1 area: (1) postsynaptic activity of human subjects obtained by magnetoencephalography and (2) spiking activity of macaques obtained by multi-tetrode arrays. The system is implemented using the NEST simulator. The results attest to a good level of resemblance between the model response and real neurophysiological recordings. As the RVSM is available online, and the model parameters can be customized by the user, we propose it as a tool to elucidate the computational mechanisms underlying orientation selectivity.
Collapse
Affiliation(s)
- Alejandro Santos-Mayo
- Laboratory of Cognitive and Computational Neuroscience, Center for Biomedical Technology, Technical University of Madrid, 28040 Madrid, Spain; (A.S.-M.); (S.M.); (J.d.E.)
- Department of Experimental Psychology, Faculty of Psychology, Complutense University of Madrid, 28040 Madrid, Spain
| | - Stephan Moratti
- Laboratory of Cognitive and Computational Neuroscience, Center for Biomedical Technology, Technical University of Madrid, 28040 Madrid, Spain; (A.S.-M.); (S.M.); (J.d.E.)
- Department of Experimental Psychology, Faculty of Psychology, Complutense University of Madrid, 28040 Madrid, Spain
- Laboratory of Clinical Neuroscience, Center for Biomedical Technology, Technical University of Madrid, 28040 Madrid, Spain
| | - Javier de Echegaray
- Laboratory of Cognitive and Computational Neuroscience, Center for Biomedical Technology, Technical University of Madrid, 28040 Madrid, Spain; (A.S.-M.); (S.M.); (J.d.E.)
- Department of Experimental Psychology, Faculty of Psychology, Complutense University of Madrid, 28040 Madrid, Spain
| | - Gianluca Susi
- Laboratory of Cognitive and Computational Neuroscience, Center for Biomedical Technology, Technical University of Madrid, 28040 Madrid, Spain; (A.S.-M.); (S.M.); (J.d.E.)
- Department of Experimental Psychology, Faculty of Psychology, Complutense University of Madrid, 28040 Madrid, Spain
- Department of Civil Engineering and Computer Science, University of Rome “Tor Vergata”, 00133 Rome, Italy
- Correspondence: ; Tel.: +34-(61)-86893399-79317
| |
Collapse
|
14
|
Mackwood O, Naumann LB, Sprekeler H. Learning excitatory-inhibitory neuronal assemblies in recurrent networks. eLife 2021; 10:59715. [PMID: 33900199 PMCID: PMC8075581 DOI: 10.7554/elife.59715] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 03/03/2021] [Indexed: 12/22/2022] Open
Abstract
Understanding the connectivity observed in the brain and how it emerges from local plasticity rules is a grand challenge in modern neuroscience. In the primary visual cortex (V1) of mice, synapses between excitatory pyramidal neurons and inhibitory parvalbumin-expressing (PV) interneurons tend to be stronger for neurons that respond to similar stimulus features, although these neurons are not topographically arranged according to their stimulus preference. The presence of such excitatory-inhibitory (E/I) neuronal assemblies indicates a stimulus-specific form of feedback inhibition. Here, we show that activity-dependent synaptic plasticity on input and output synapses of PV interneurons generates a circuit structure that is consistent with mouse V1. Computational modeling reveals that both forms of plasticity must act in synergy to form the observed E/I assemblies. Once established, these assemblies produce a stimulus-specific competition between pyramidal neurons. Our model suggests that activity-dependent plasticity can refine inhibitory circuits to actively shape cortical computations.
Collapse
Affiliation(s)
- Owen Mackwood
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany.,Department for Electrical Engineering and Computer Science, Technische Universität Berlin, Berlin, Germany
| | - Laura B Naumann
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany.,Department for Electrical Engineering and Computer Science, Technische Universität Berlin, Berlin, Germany
| | - Henning Sprekeler
- Bernstein Center for Computational Neuroscience Berlin, Berlin, Germany.,Department for Electrical Engineering and Computer Science, Technische Universität Berlin, Berlin, Germany
| |
Collapse
|
15
|
Ferreiro DN, Conde-Ocazionez SA, Patriota JHN, Souza LC, Oliveira MF, Wolf F, Schmidt KE. Spatial clustering of orientation preference in primary visual cortex of the large rodent agouti. iScience 2020; 24:101882. [PMID: 33354663 PMCID: PMC7744940 DOI: 10.1016/j.isci.2020.101882] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 10/16/2020] [Accepted: 11/25/2020] [Indexed: 11/28/2022] Open
Abstract
All rodents investigated so far possess orientation-selective neurons in the primary visual cortex (V1) but – in contrast to carnivores and primates – no evidence of periodic maps with pinwheel-like structures. Theoretical studies debating whether phylogeny or universal principles determine development of pinwheels point to V1 size as a critical constraint. Thus, we set out to study maps of agouti, a big diurnal rodent with a V1 size comparable to cats'. In electrophysiology, we detected interspersed orientation and direction-selective neurons with a bias for horizontal contours, corroborated by homogeneous activation in optical imaging. Compatible with spatial clustering at short distance, nearby neurons tended to exhibit similar orientation preference. Our results argue against V1 size as a key parameter in determining the presence of periodic orientation maps. They are consistent with a phylogenetic influence on the map layout and development, potentially reflecting distinct retinal traits or interspecies differences in cortical circuitry. Agouti V1 neurons are among the highest orientation- and direction-selective neurons in rodents They respond best to low spatial frequencies and with a bias for horizontal orientations There is no evidence of systematic periodic maps of orientation columns for agouti Neurons along the vertical cortical axis tend to have similar orientation preferences
Collapse
Affiliation(s)
- Dardo N Ferreiro
- Neurobiology of Vision Lab, Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil
| | - Sergio A Conde-Ocazionez
- Neurobiology of Vision Lab, Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil.,Universidad de Santander, Facultad de Ciencias de la Salud. Laboratorio de Neurociencias, Bucaramanga, Colombia
| | - João H N Patriota
- Neurobiology of Vision Lab, Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil
| | - Luã C Souza
- Neurobiology of Vision Lab, Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil
| | - Moacir F Oliveira
- Department of Veterinary Medicine, Universidade Federal Rural do Semiárido, Mossoró, Brazil
| | - Fred Wolf
- Max Planck Institute for Dynamics and Self-Organization, Göttingen, Germany.,Bernstein Center for Computational Neuroscience, University of Göttingen, Göttingen, Germany.,Max Planck Institute of Experimental Medicine, Göttingen, Germany.,Campus Institute for Dynamics of Biological Networks, University of Göttingen, Göttingen, Germany
| | - Kerstin E Schmidt
- Neurobiology of Vision Lab, Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil
| |
Collapse
|
16
|
Wang T, Li Y, Yang G, Dai W, Yang Y, Han C, Wang X, Zhang Y, Xing D. Laminar Subnetworks of Response Suppression in Macaque Primary Visual Cortex. J Neurosci 2020; 40:7436-7450. [PMID: 32817246 PMCID: PMC7511183 DOI: 10.1523/jneurosci.1129-20.2020] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Revised: 08/04/2020] [Accepted: 08/10/2020] [Indexed: 11/21/2022] Open
Abstract
Cortical inhibition plays an important role in information processing in the brain. However, the mechanisms by which inhibition and excitation are coordinated to generate functions in the six layers of the cortex remain unclear. Here, we measured laminar-specific responses to stimulus orientations in primary visual cortex (V1) of awake monkeys (male, Macaca mulatta). We distinguished inhibitory effects (suppression) from excitation, by taking advantage of the separability of excitation and inhibition in the orientation and time domains. We found two distinct types of suppression governing different layers. Fast suppression (FS) was strongest in input layers (4C and 6), and slow suppression (SS) was 3 times stronger in output layers (2/3 and 5). Interestingly, the two types of suppression were correlated with different functional properties measured with drifting gratings. FS was primarily correlated with orientation selectivity in input layers (r = -0.65, p < 10-9), whereas SS was primarily correlated with surround suppression in output layers (r = 0.61, p < 10-4). The earliest SS in layer 1 indicates the origin of cortical feedback for SS, in contrast to the feedforward/recurrent origin of FS. Our results reveal two V1 laminar subnetworks with different response suppression that may provide a general framework for laminar processing in other sensory cortices.SIGNIFICANCE STATEMENT This study sought to understand inhibitory effects (suppression) and their relationships with functional properties in the six different layers of the cortex. We found that the diversity of neural responses across layers in primary visual cortex (V1) could be fully explained by one excitatory and two suppressive components (fast and slow suppression). The distinct laminar distributions, origins, and functional roles of the two types of suppression provided a simplified representation of the differences between two V1 subnetworks (input network and output network). These results not only help to elucidate computational principles in macaque V1, but also provide a framework for general computation of cortical laminae in other sensory cortices.
Collapse
Affiliation(s)
- Tian Wang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Yang Li
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Guanzhong Yang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Weifeng Dai
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Yi Yang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Chuanliang Han
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Xingyun Wang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Yange Zhang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Dajun Xing
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| |
Collapse
|
17
|
Li B, Routh BN, Johnston D, Seidemann E, Priebe NJ. Voltage-Gated Intrinsic Conductances Shape the Input-Output Relationship of Cortical Neurons in Behaving Primate V1. Neuron 2020; 107:185-196.e4. [PMID: 32348717 DOI: 10.1016/j.neuron.2020.04.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Revised: 01/02/2020] [Accepted: 03/31/2020] [Indexed: 12/01/2022]
Abstract
Neurons are input-output (I/O) devices-they receive synaptic inputs from other neurons, integrate those inputs with their intrinsic properties, and generate action potentials as outputs. To understand this fundamental process, we studied the interaction between synaptic inputs and intrinsic properties using whole-cell recordings from V1 neurons of awake, fixating macaque monkeys. Our measurements during spontaneous activity and visual stimulation reveal an intrinsic voltage-gated conductance that profoundly alters the integrative properties and visual responses of cortical neurons. This voltage-gated conductance increases neuronal gain and selectivity with subthreshold depolarization and linearizes the relationship between synaptic input and neural output. This intrinsic conductance is found in layer 2/3 V1 neurons of awake macaques, anesthetized mice, and acute brain slices. These results demonstrate that intrinsic conductances play an essential role in shaping the I/O relationship of cortical neurons and must be taken into account in future models of cortical computations.
Collapse
Affiliation(s)
- Baowang Li
- Center for Perceptual Systems, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Center for Learning and Memory, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Neuroscience, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Psychology, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA
| | - Brandy N Routh
- Center for Learning and Memory, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Neuroscience, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA
| | - Daniel Johnston
- Center for Learning and Memory, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Neuroscience, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA
| | - Eyal Seidemann
- Center for Perceptual Systems, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Neuroscience, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Psychology, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA.
| | - Nicholas J Priebe
- Center for Learning and Memory, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA; Department of Neuroscience, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA.
| |
Collapse
|
18
|
Awwad B, Jankowski MM, Nelken I. Synaptic Recruitment Enhances Gap Termination Responses in Auditory Cortex. Cereb Cortex 2020; 30:4465-4480. [PMID: 32147725 PMCID: PMC7325714 DOI: 10.1093/cercor/bhaa044] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 01/30/2020] [Accepted: 02/06/2020] [Indexed: 11/22/2022] Open
Abstract
The ability to detect short gaps in noise is an important tool for assessing the temporal resolution in the auditory cortex. However, the mere existence of responses to temporal gaps bounded by two short broadband markers is surprising, because of the expected short-term suppression that is prevalent in auditory cortex. Here, we used in-vivo intracellular recordings in anesthetized rats to dissect the synaptic mechanisms that underlie gap-related responses. When a gap is bounded by two short markers, a gap termination response was evoked by the onset of the second marker with minimal contribution from the offset of the first marker. Importantly, we show that the gap termination response was driven by a different (potentially partially overlapping) synaptic population than that underlying the onset response to the first marker. This recruitment of additional synaptic resources is a novel mechanism contributing to the important perceptual task of gap detection.
Collapse
Affiliation(s)
- Bshara Awwad
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.,Department Neurobiology, Silberman Institute of Life Sciences, Hebrew University of Jerusalem, 9190401 Jerusalem, Israel
| | - Maciej M Jankowski
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.,Department Neurobiology, Silberman Institute of Life Sciences, Hebrew University of Jerusalem, 9190401 Jerusalem, Israel
| | - Israel Nelken
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.,Department Neurobiology, Silberman Institute of Life Sciences, Hebrew University of Jerusalem, 9190401 Jerusalem, Israel
| |
Collapse
|
19
|
Kilohertz two-photon fluorescence microscopy imaging of neural activity in vivo. Nat Methods 2020; 17:287-290. [PMID: 32123392 PMCID: PMC7199528 DOI: 10.1038/s41592-020-0762-7] [Citation(s) in RCA: 111] [Impact Index Per Article: 27.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2018] [Accepted: 01/23/2020] [Indexed: 01/03/2023]
Abstract
Understanding information processing in the brain requires us to monitor
neural activity at high spatiotemporal resolution. Using an ultrafast two-photon
fluorescence microscope (2PFM) empowered by all-optical laser scanning, we
imaged neural activity in vivo at up to 3,000 frames per second
and submicron spatial resolution. This ultrafast imaging method enabled
monitoring of both supra- and sub-threshold electrical activity down to 345
μm below the brain surface in head-fixed awake mice.
Collapse
|
20
|
Latimer KW, Rieke F, Pillow JW. Inferring synaptic inputs from spikes with a conductance-based neural encoding model. eLife 2019; 8:47012. [PMID: 31850846 PMCID: PMC6989090 DOI: 10.7554/elife.47012] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Accepted: 12/17/2019] [Indexed: 01/15/2023] Open
Abstract
Descriptive statistical models of neural responses generally aim to characterize the mapping from stimuli to spike responses while ignoring biophysical details of the encoding process. Here, we introduce an alternative approach, the conductance-based encoding model (CBEM), which describes a mapping from stimuli to excitatory and inhibitory synaptic conductances governing the dynamics of sub-threshold membrane potential. Remarkably, we show that the CBEM can be fit to extracellular spike train data and then used to predict excitatory and inhibitory synaptic currents. We validate these predictions with intracellular recordings from macaque retinal ganglion cells. Moreover, we offer a novel quasi-biophysical interpretation of the Poisson generalized linear model (GLM) as a special case of the CBEM in which excitation and inhibition are perfectly balanced. This work forges a new link between statistical and biophysical models of neural encoding and sheds new light on the biophysical variables that underlie spiking in the early visual pathway.
Collapse
Affiliation(s)
- Kenneth W Latimer
- Department of Physiology and Biophysics, University of Washington, Seattle, United States
| | - Fred Rieke
- Department of Physiology and Biophysics, University of Washington, Seattle, United States
| | - Jonathan W Pillow
- Princeton Neuroscience Institute, Department of Psychology, Princeton University, Princeton, United States
| |
Collapse
|
21
|
Mohan YS, Jayakumar J, Lloyd EKJ, Levichkina E, Vidyasagar TR. Diversity of Feature Selectivity in Macaque Visual Cortex Arising from a Limited Number of Broadly Tuned Input Channels. Cereb Cortex 2019; 29:5255-5268. [PMID: 31220214 DOI: 10.1093/cercor/bhz063] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Spike (action potential) responses of most primary visual cortical cells in the macaque are sharply tuned for the orientation of a line or an edge, and neurons preferring similar orientations are clustered together in cortical columns. The preferred stimulus orientation of these columns span the full range of orientations, as observed in recordings of spikes and in classical optical imaging of intrinsic signals. However, when we imaged the putative thalamic input to striate cortical cells that can be seen in imaging of intrinsic signals when they are analyzed on a larger spatial scale, we found that the orientation domain map of the primary visual cortex did not show the same diversity of orientations. This map was dominated by just the one orientation that is most commonly preferred by neurons in the retina and the lateral geniculate nucleus. This supports cortical feature selectivity and columnar architecture being built upon feed-forward signals transmitted from the thalamus in a very limited number of broadly tuned input channels.
Collapse
Affiliation(s)
- Yamni S Mohan
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia
| | - Jaikishan Jayakumar
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia.,Centre for Computational Brain Research, Indian Institute of Technology-Madras, Chennai, India
| | - Errol K J Lloyd
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia
| | - Ekaterina Levichkina
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia.,Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia
| | - Trichur R Vidyasagar
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia.,Melbourne Neuroscience Institute, University of Melbourne, Parkville, Victoria, Australia
| |
Collapse
|
22
|
Fang Q, Chou XL, Peng B, Zhong W, Zhang LI, Tao HW. A Differential Circuit via Retino-Colliculo-Pulvinar Pathway Enhances Feature Selectivity in Visual Cortex through Surround Suppression. Neuron 2019; 105:355-369.e6. [PMID: 31812514 DOI: 10.1016/j.neuron.2019.10.027] [Citation(s) in RCA: 61] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2019] [Revised: 08/15/2019] [Accepted: 10/17/2019] [Indexed: 01/06/2023]
Abstract
In the mammalian visual system, information from the retina streams into parallel bottom-up pathways. It remains unclear how these pathways interact to contribute to contextual modulation of visual cortical processing. By optogenetic inactivation and activation of mouse lateral posterior nucleus (LP) of thalamus, a homolog of pulvinar, or its projection to primary visual cortex (V1), we found that LP contributes to surround suppression of layer (L) 2/3 responses in V1 by driving L1 inhibitory neurons. This results in subtractive suppression of visual responses and an overall enhancement of orientation, direction, spatial, and size selectivity. Neurons in V1-projecting LP regions receive bottom-up input from the superior colliculus (SC) and respond preferably to non-patterned visual noise. The noise-dependent LP activity allows V1 to "cancel" noise effects and maintain its orientation selectivity under varying noise background. Thus, the retina-SC-LP-V1 pathway forms a differential circuit with the canonical retino-geniculate pathway to achieve context-dependent sharpening of visual representations.
Collapse
Affiliation(s)
- Qi Fang
- Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA; Graduate Program in Neuroscience, University of Southern California, Los Angeles, CA 90089, USA
| | - Xiao-Lin Chou
- Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA; Graduate Program in Neuroscience, University of Southern California, Los Angeles, CA 90089, USA
| | - Bo Peng
- Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA; Graduate Program in Neuroscience, University of Southern California, Los Angeles, CA 90089, USA
| | - Wen Zhong
- Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA
| | - Li I Zhang
- Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA; Department of Physiology and Neuroscience, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA.
| | - Huizhong Whit Tao
- Zilkha Neurogenetic Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA; Department of Physiology and Neuroscience, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA.
| |
Collapse
|
23
|
Scholl B, Wilson DE, Jaepel J, Fitzpatrick D. Functional Logic of Layer 2/3 Inhibitory Connectivity in the Ferret Visual Cortex. Neuron 2019; 104:451-457.e3. [PMID: 31495646 DOI: 10.1016/j.neuron.2019.08.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Revised: 05/29/2019] [Accepted: 08/01/2019] [Indexed: 10/26/2022]
Abstract
Understanding how cortical inhibition shapes circuit function requires identifying the connectivity rules relating the response properties of inhibitory interneurons and their postsynaptic targets. Here we explore the orientation tuning of layer 2/3 inhibitory inputs in the ferret visual cortex using a combination of in vivo axon imaging, functional input mapping, and physiology. Inhibitory boutons exhibit robust orientation-tuned responses with preferences that can differ significantly from the cortical column in which they reside. Inhibitory input fields measured with patterned optogenetic stimulation and intracellular recordings revealed that these inputs originate from a wide range of orientation domains, inconsistent with a model of co-tuned inhibition and excitation. Intracellular synaptic conductance measurements confirm that individual neurons can depart from a co-tuned regime. Our results argue against a simple rule for the arrangement of inhibitory inputs supplied by layer 2/3 circuits and suggest that heterogeneity in presynaptic inhibitory networks contributes to neural response properties.
Collapse
Affiliation(s)
- Benjamin Scholl
- Max Planck Florida Institute for Neuroscience, 1 Max Planck Way, Jupiter, FL 33458, USA.
| | | | - Juliane Jaepel
- Max Planck Florida Institute for Neuroscience, 1 Max Planck Way, Jupiter, FL 33458, USA
| | - David Fitzpatrick
- Max Planck Florida Institute for Neuroscience, 1 Max Planck Way, Jupiter, FL 33458, USA
| |
Collapse
|
24
|
Yunzab M, Cloherty SL, Ibbotson MR. Comparison of contrast-dependent phase sensitivity in primary visual cortex of mouse, cat and macaque. Neuroreport 2019; 30:960-965. [PMID: 31469724 PMCID: PMC6735947 DOI: 10.1097/wnr.0000000000001307] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Accepted: 07/03/2019] [Indexed: 11/26/2022]
Abstract
Neurones in the primary visual cortex (V1) are classified into simple and complex types. Simple cells are phase-sensitive, that is, they modulate their responses according to the position and brightness polarity of edges in their receptive fields. Complex cells are phase invariant, that is, they respond to edges in their receptive fields regardless of location or brightness polarity. Simple and complex cells are quantified by the degree of sensitivity to the spatial phases of drifting sinusoidal gratings. Some V1 complex cells become more phase-sensitive at low contrasts. Here we use a standardized analysis method for data derived from grating stimuli developed for macaques to reanalyse data previously collected from cats, and also collect and analyse the responses of 73 mouse V1 neurons. The analysis provides the first consistent comparative study of contrast-dependent phase sensitivity in V1 of mouse, cat and macaque monkey.
Collapse
Affiliation(s)
- Molis Yunzab
- National Vision Research Institute, Australian College of Optometry, Carlton
- Department of Optometry and Vision Sciences, University of Melbourne, Parkville
| | - Shaun L. Cloherty
- Department of Physiology, Monash University, Clayton, VIC, Australia
| | - Michael R. Ibbotson
- National Vision Research Institute, Australian College of Optometry, Carlton
- Department of Optometry and Vision Sciences, University of Melbourne, Parkville
| |
Collapse
|
25
|
Kazemipour A, Novak O, Flickinger D, Marvin JS, Abdelfattah AS, King J, Borden PM, Kim JJ, Al-Abdullatif SH, Deal PE, Miller EW, Schreiter ER, Druckmann S, Svoboda K, Looger LL, Podgorski K. Kilohertz frame-rate two-photon tomography. Nat Methods 2019; 16:778-786. [PMID: 31363222 PMCID: PMC6754705 DOI: 10.1038/s41592-019-0493-9] [Citation(s) in RCA: 81] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Accepted: 06/14/2019] [Indexed: 11/25/2022]
Abstract
Point-scanning two-photon microscopy enables high-resolution imaging within scattering specimens such as the mammalian brain, but sequential acquisition of voxels fundamentally limits its speed. We developed a two-photon imaging technique that scans lines of excitation across a focal plane at multiple angles and computationally recovers high-resolution images, attaining voxel rates of over 1 billion Hz in structured samples. Using a static image as a prior for recording neural activity, we imaged visually evoked and spontaneous glutamate release across hundreds of dendritic spines in mice at depths over 250 µm and frame rates over 1 kHz. Dendritic glutamate transients in anesthetized mice are synchronized within spatially contiguous domains spanning tens of micrometers at frequencies ranging from 1-100 Hz. We demonstrate millisecond-resolved recordings of acetylcholine and voltage indicators, three-dimensional single-particle tracking and imaging in densely labeled cortex. Our method surpasses limits on the speed of raster-scanned imaging imposed by fluorescence lifetime.
Collapse
Affiliation(s)
- Abbas Kazemipour
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - Ondrej Novak
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
- Second Medical Faculty, Charles University, Prague, Czech Republic
| | - Daniel Flickinger
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jonathan S Marvin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | | | - Philip M Borden
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jeong Jun Kim
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Parker E Deal
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA
| | - Evan W Miller
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA
- Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA
- Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA, USA
| | - Eric R Schreiter
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shaul Druckmann
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - Karel Svoboda
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Loren L Looger
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Kaspar Podgorski
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| |
Collapse
|
26
|
Synaptic Basis for Contrast-Dependent Shifts in Functional Identity in Mouse V1. eNeuro 2019; 6:eN-NWR-0480-18. [PMID: 30993184 PMCID: PMC6464514 DOI: 10.1523/eneuro.0480-18.2019] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Revised: 02/12/2019] [Accepted: 02/27/2019] [Indexed: 11/21/2022] Open
Abstract
A central transformation that occurs within mammalian visual cortex is the change from linear, polarity-sensitive responses to nonlinear, polarity-insensitive responses. These neurons are classically labelled as either simple or complex, respectively, on the basis of their response linearity (Skottun et al., 1991). While the difference between cell classes is clear when the stimulus strength is high, reducing stimulus strength diminishes the differences between the cell types and causes some complex cells to respond as simple cells (Crowder et al., 2007; van Kleef et al., 2010; Hietanen et al., 2013). To understand the synaptic basis for this shift in behavior, we used in vivo whole-cell recordings while systematically shifting stimulus contrast. We find systematic shifts in the degree of complex cell responses in mouse primary visual cortex (V1) at the subthreshold level, demonstrating that synaptic inputs change in concert with the shifts in response linearity and that the change in response linearity is not simply due to the threshold nonlinearity. These shifts are consistent with a visual cortex model in which the recurrent amplification acts as a critical component in the generation of complex cell responses (Chance et al., 1999).
Collapse
|
27
|
Chettih SN, Harvey CD. Single-neuron perturbations reveal feature-specific competition in V1. Nature 2019; 567:334-340. [PMID: 30842660 PMCID: PMC6682407 DOI: 10.1038/s41586-019-0997-6] [Citation(s) in RCA: 109] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Accepted: 02/07/2019] [Indexed: 12/22/2022]
Abstract
The computations performed by local neural populations, such as a cortical layer, are typically inferred from anatomical connectivity and observations of neural activity. Here we describe a method-influence mapping-that uses single-neuron perturbations to directly measure how cortical neurons reshape sensory representations. In layer 2/3 of the primary visual cortex (V1), we use two-photon optogenetics to trigger action potentials in a targeted neuron and calcium imaging to measure the effect on spiking in neighbouring neurons in awake mice viewing visual stimuli. Excitatory neurons on average suppressed other neurons and had a centre-surround influence profile over anatomical space. A neuron's influence on its neighbour depended on their similarity in activity. Notably, neurons suppressed activity in similarly tuned neurons more than in dissimilarly tuned neurons. In addition, photostimulation reduced the population response, specifically to the targeted neuron's preferred stimulus, by around 2%. Therefore, V1 layer 2/3 performed feature competition, in which a like-suppresses-like motif reduces redundancy in population activity and may assist with inference of the features that underlie sensory input. We anticipate that influence mapping can be extended to investigate computations in other neural populations.
Collapse
|
28
|
Bharmauria V, Bachatene L, Molotchnikoff S. The speed of neuronal adaptation: A perspective through the visual cortex. Eur J Neurosci 2019; 49:1215-1219. [PMID: 30803085 DOI: 10.1111/ejn.14393] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Revised: 02/11/2019] [Accepted: 02/14/2019] [Indexed: 12/30/2022]
Affiliation(s)
- Vishal Bharmauria
- Neurophysiology of Visual System, Département de Sciences Biologiques, Université de Montréal, Montréal, Quebec
| | - Lyes Bachatene
- Neurophysiology of Visual System, Département de Sciences Biologiques, Université de Montréal, Montréal, Quebec
| | - Stéphane Molotchnikoff
- Neurophysiology of Visual System, Département de Sciences Biologiques, Université de Montréal, Montréal, Quebec.,Département de Génie Électrique et Génie Informatique, Université de Sherbrooke, Sherbrooke, Quebec
| |
Collapse
|
29
|
Abstract
Recently, sophisticated optogenetic tools for mouse have enabled many detailed studies of the neuronal circuits of its primary visual cortex (V1), providing much more specific information than is available for cat or monkey. Among various other differences, they show a striking contrast dependency in orientation selectivity in mouse V1 rather than the well-known contrast invariance for cat and monkey. Constrained by the existing experiment data, we develop a comprehensive large-scale model of an effective input layer of mouse V1 that successfully reproduces the contrast-dependent phenomena and many other response properties. The model helps to probe different mechanisms based on excitation–inhibition balance that underlie both contrast dependencies and invariance, and it provides implications for future studies on these circuits. Recent experiments have shown that mouse primary visual cortex (V1) is very different from that of cat or monkey, including response properties—one of which is that contrast invariance in the orientation selectivity (OS) of the neurons’ firing rates is replaced in mouse with contrast-dependent sharpening (broadening) of OS in excitatory (inhibitory) neurons. These differences indicate a different circuit design for mouse V1 than that of cat or monkey. Here we develop a large-scale computational model of an effective input layer of mouse V1. Constrained by experiment data, the model successfully reproduces experimentally observed response properties—for example, distributions of firing rates, orientation tuning widths, and response modulations of simple and complex neurons, including the contrast dependence of orientation tuning curves. Analysis of the model shows that strong feedback inhibition and strong orientation-preferential cortical excitation to the excitatory population are the predominant mechanisms underlying the contrast-sharpening of OS in excitatory neurons, while the contrast-broadening of OS in inhibitory neurons results from a strong but nonpreferential cortical excitation to these inhibitory neurons, with the resulting contrast-broadened inhibition producing a secondary enhancement on the contrast-sharpened OS of excitatory neurons. Finally, based on these mechanisms, we show that adjusting the detailed balances between the predominant mechanisms can lead to contrast invariance—providing insights for future studies on contrast dependence (invariance).
Collapse
|
30
|
Rupprecht P, Friedrich RW. Precise Synaptic Balance in the Zebrafish Homolog of Olfactory Cortex. Neuron 2018; 100:669-683.e5. [PMID: 30318416 DOI: 10.1016/j.neuron.2018.09.013] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 07/04/2018] [Accepted: 09/06/2018] [Indexed: 01/04/2023]
Abstract
Neuronal computations critically depend on the connectivity rules that govern the convergence of excitatory and inhibitory synaptic signals onto individual neurons. To examine the functional synaptic organization of a distributed memory network, we performed voltage clamp recordings in telencephalic area Dp of adult zebrafish, the homolog of olfactory cortex. In neurons of posterior Dp, odor stimulation evoked large, recurrent excitatory and inhibitory inputs that established a transient state of high conductance and synaptic balance. Excitation and inhibition in individual neurons were co-tuned to different odors and correlated on slow and fast timescales. This precise synaptic balance implies specific connectivity among Dp neurons, despite the absence of an obvious topography. Precise synaptic balance stabilizes activity patterns in different directions of coding space and in time while preserving high bandwidth. The coordinated connectivity of excitatory and inhibitory subnetworks in Dp therefore supports fast recurrent memory operations.
Collapse
Affiliation(s)
- Peter Rupprecht
- Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland; Faculty of Natural Sciences, University of Basel, 4003 Basel, Switzerland.
| | - Rainer W Friedrich
- Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland; Faculty of Natural Sciences, University of Basel, 4003 Basel, Switzerland.
| |
Collapse
|
31
|
Pattadkal JJ, Mato G, van Vreeswijk C, Priebe NJ, Hansel D. Emergent Orientation Selectivity from Random Networks in Mouse Visual Cortex. Cell Rep 2018; 24:2042-2050.e6. [PMID: 30134166 PMCID: PMC6179374 DOI: 10.1016/j.celrep.2018.07.054] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2017] [Revised: 05/25/2018] [Accepted: 07/16/2018] [Indexed: 01/13/2023] Open
Abstract
The connectivity principles underlying the emergence of orientation selectivity in primary visual cortex (V1) of mammals lacking an orientation map (such as rodents and lagomorphs) are poorly understood. We present a computational model in which random connectivity gives rise to orientation selectivity that matches experimental observations. The model predicts that mouse V1 neurons should exhibit intricate receptive fields in the two-dimensional frequency domain, causing a shift in orientation preferences with spatial frequency. We find evidence for these features in mouse V1 using calcium imaging and intracellular whole-cell recordings.
Collapse
Affiliation(s)
- Jagruti J Pattadkal
- Center for Perceptual Systems and Center for Learning and Memory, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA
| | - German Mato
- Centro Atomico Bariloche and Instituto Balseiro, CNEA and CONICET, 8400 Bariloche, Rio Negro, Argentina
| | - Carl van Vreeswijk
- Center of Neurophysics, Physiology and Pathologies, CNRS-UMR8119, 45 Rue des Saints-Pères, 75270 Paris, France
| | - Nicholas J Priebe
- Center for Perceptual Systems and Center for Learning and Memory, The University of Texas at Austin, 2415 Speedway, Austin, TX 78712, USA
| | - David Hansel
- Center of Neurophysics, Physiology and Pathologies, CNRS-UMR8119, 45 Rue des Saints-Pères, 75270 Paris, France.
| |
Collapse
|
32
|
Differential tuning of excitation and inhibition shapes direction selectivity in ferret visual cortex. Nature 2018; 560:97-101. [PMID: 30046106 PMCID: PMC6946183 DOI: 10.1038/s41586-018-0354-1] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Accepted: 06/08/2018] [Indexed: 11/12/2022]
Abstract
To encode specific sensory inputs, cortical neurons must generate selective responses for distinct stimulus features. In principle, a variety of factors contribute to a cortical neuron’s response selectivity: the tuning and strength of excitatory1–3 and inhibitory synaptic inputs4–6, dendritic nonlinearities7–9, and spike threshold10,11. Here we employ a combination of techniques including in vivo whole-cell recording, synaptic and cellular resolution in vivo two photon calcium imaging, and GABAergic-selective optogenetic manipulation to dissect the factors contributing to direction selective responses of layer 2/3 neurons in ferret visual cortex (V1). Two-photon calcium imaging of dendritic spines12,13 revealed that each neuron receives a mixture of excitatory synaptic inputs selective for the somatic preferred or null direction of motion. The relative number of preferred- and null-tuned excitatory inputs predicted a neuron’s somatic direction preference, but failed to account for the degree of direction selectivity. In contrast, in vivo whole-cell patch clamp recordings revealed a striking degree of direction selectivity in subthreshold responses that was significantly correlated with spiking direction selectivity. Subthreshold direction selectivity was predicted by the magnitude and variance of the response to the null direction of motion, and several lines of evidence including conductance measurements demonstrate that differential tuning of excitation and inhibition suppresses responses to the null direction of motion. Consistent with this idea, optogenetic inactivation of GABAergic neurons in layer 2/3 reduced direction selectivity by enhancing responses to the null direction. Furthermore, using a new technique to optogenetically map connections of inhibitory neurons in layer 2/3 in vivo, we find that layer 2/3 inhibitory neurons make long-range, intercolumnar projections to excitatory neurons that prefer the opposite direction of motion. We conclude that intracortical inhibition exerts a major influence on the degree of direction selectivity in layer 2/3 of ferret V1 by suppressing responses to the null direction of motion.
Collapse
|
33
|
Shi X, Jin Y, Cang J. Transformation of Feature Selectivity From Membrane Potential to Spikes in the Mouse Superior Colliculus. Front Cell Neurosci 2018; 12:163. [PMID: 29970991 PMCID: PMC6018398 DOI: 10.3389/fncel.2018.00163] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2018] [Accepted: 05/25/2018] [Indexed: 11/13/2022] Open
Abstract
Neurons in the visual system display varying degrees of selectivity for stimulus features such as orientation and direction. Such feature selectivity is generated and processed by intricate circuit and synaptic mechanisms. A key factor in this process is the input-output transformation from membrane potential (Vm) to spikes in individual neurons. Here, we use in vivo whole-cell recording to study Vm-to-spike transformation of visual feature selectivity in the superficial neurons of the mouse superior colliculus (SC). As expected from the spike threshold effect, direction and orientation selectivity increase from Vm to spike responses. The degree of this increase is highly variable, and interestingly, it is correlated with the receptive field size of the recorded neurons. We find that the relationships between Vm and spike rate and between Vm dynamics and spike initiation are also correlated with receptive field size, which likely contribute to the observed input-output transformation of feature selectivity. Together, our findings provide useful information for understanding information processing and visual transformation in the mouse SC.
Collapse
Affiliation(s)
- Xuefeng Shi
- Department of Neurobiology, Northwestern University, Evanston, IL, United States.,Tianjin Eye Hospital, Tianjin Key Laboratory of Ophthalmology and Visual Science, Tianjin Eye Institute, Clinical College of Ophthalmology, Tianjin Medical University, Tianjin, China
| | - Yanjiao Jin
- Department of Neurobiology, Northwestern University, Evanston, IL, United States.,General Hospital, Tianjin Medical University, Tianjin, China
| | - Jianhua Cang
- Department of Neurobiology, Northwestern University, Evanston, IL, United States.,Department of Biology and Department of Psychology, University of Virginia, Charlottesville, VA, United States
| |
Collapse
|
34
|
King JL, Crowder NA. Adaptation to stimulus orientation in mouse primary visual cortex. Eur J Neurosci 2018; 47:346-357. [PMID: 29357122 DOI: 10.1111/ejn.13830] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Revised: 12/15/2017] [Accepted: 01/08/2018] [Indexed: 02/02/2023]
Abstract
Information processing in the visual system is shaped by recent stimulus history, such that prolonged viewing of an adapting stimulus can alter the perception of subsequently presented test stimuli. In the tilt-after-effect, the perceived orientation of a grating is often repelled away from the orientation of a previously viewed adapting grating. A possible neural correlate for the tilt-after-effect has been described in cat and macaque primary visual cortex (V1), where adaptation produces repulsive shifts in the orientation tuning curves of V1 neurons. We investigated adaptation to stimulus orientation in mouse V1 to determine whether known species differences in orientation processing, notably V1 functional architecture and proportion of tightly tuned cells, are important for these repulsive shifts. Unlike the consistent repulsion reported in other species, we found that repulsion was only about twice as common as attraction in our mouse data. Furthermore, adapted responses were attenuated across all orientations. A simple model that captured key physiological findings reported in cats and mice indicated that the greater proportion of broadly tuned neurons in mice may explain the observed species differences in adaptation.
Collapse
Affiliation(s)
- Jillian L King
- Department of Psychology and Neuroscience, Dalhousie University, 1355 Oxford Street, PO Box 15000, Halifax, NS, B3H 4R2, Canada
| | - Nathan A Crowder
- Department of Psychology and Neuroscience, Dalhousie University, 1355 Oxford Street, PO Box 15000, Halifax, NS, B3H 4R2, Canada
| |
Collapse
|
35
|
Zhou S, Yu Y. Synaptic E-I Balance Underlies Efficient Neural Coding. Front Neurosci 2018; 12:46. [PMID: 29456491 PMCID: PMC5801300 DOI: 10.3389/fnins.2018.00046] [Citation(s) in RCA: 90] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Accepted: 01/19/2018] [Indexed: 12/19/2022] Open
Abstract
Both theoretical and experimental evidence indicate that synaptic excitation and inhibition in the cerebral cortex are well-balanced during the resting state and sensory processing. Here, we briefly summarize the evidence for how neural circuits are adjusted to achieve this balance. Then, we discuss how such excitatory and inhibitory balance shapes stimulus representation and information propagation, two basic functions of neural coding. We also point out the benefit of adopting such a balance during neural coding. We conclude that excitatory and inhibitory balance may be a fundamental mechanism underlying efficient coding.
Collapse
Affiliation(s)
- Shanglin Zhou
- State Key Laboratory of Medical Neurobiology, School of Life Science and the Collaborative Innovation Center for Brain Science, Institutes of Brain Science, Center for Computational Systems Biology, Fudan University, Shanghai, China
| | - Yuguo Yu
- State Key Laboratory of Medical Neurobiology, School of Life Science and the Collaborative Innovation Center for Brain Science, Institutes of Brain Science, Center for Computational Systems Biology, Fudan University, Shanghai, China
| |
Collapse
|
36
|
Inhibition in Simple Cell Receptive Fields Is Broad and OFF-Subregion Biased. J Neurosci 2017; 38:595-612. [PMID: 29196320 DOI: 10.1523/jneurosci.2099-17.2017] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2017] [Revised: 09/11/2017] [Accepted: 10/02/2017] [Indexed: 11/21/2022] Open
Abstract
Inhibition in thalamorecipient layer 4 simple cells of primary visual cortex is believed to play important roles in establishing visual response properties and integrating visual inputs across their receptive fields (RFs). Simple cell RFs are characterized by nonoverlapping, spatially restricted subregions in which visual stimuli can either increase or decrease the firing rate of the cell, depending on contrast. Inhibition is believed to be triggered exclusively from visual stimulation of individual RF subregions. However, this view is at odds with the known anatomy of layer 4 interneurons in visual cortex and differs from recent findings in mouse visual cortex. Here we show with in vivo intracellular recordings in cats that while excitation is restricted to RF subregions, inhibition spans the width of simple cell RFs. Consequently, excitatory stimuli within a subregion concomitantly drive excitation and inhibition. Furthermore, we found that the distribution of inhibition across the RF is stronger toward OFF subregions. This inhibitory OFF-subregion bias has a functional consequence on spatial integration of inputs across the RF. A model based on the known anatomy of layer 4 demonstrates that the known proportion and connectivity of inhibitory neurons in layer 4 of primary visual cortex is sufficient to explain broad inhibition with an OFF-subregion bias while generating a variety of phase relations, including antiphase, between excitation and inhibition in response to drifting gratings.SIGNIFICANCE STATEMENT The wiring of excitatory and inhibitory neurons in cortical circuits is key to determining the response properties in sensory cortex. In the visual cortex, the first cells that receive visual input are simple cells in layer 4. The underlying circuitry responsible for the response properties of simple cells is not yet known. In this study, we challenge a long-held view concerning the pattern of inhibitory input and provide results that agree with current known anatomy. We show here that inhibition is evoked broadly across the receptive fields of simple cells, and we identify a surprising bias in inhibition within the receptive field. Our findings represent a step toward a unified view of inhibition across different species and sensory systems.
Collapse
|
37
|
Samonds JM, Feese BD, Lee TS, Kuhlman SJ. Nonuniform surround suppression of visual responses in mouse V1. J Neurophysiol 2017; 118:3282-3292. [PMID: 28931608 DOI: 10.1152/jn.00172.2017] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Complex receptive field characteristics, distributed across a population of neurons, are thought to be critical for solving perceptual inference problems that arise during motion and image segmentation. For example, in a class of neurons referred to as "end-stopped," increasing the length of stimuli outside of the bar-responsive region into the surround suppresses responsiveness. It is unknown whether these properties exist for receptive field surrounds in the mouse. We examined surround modulation in layer 2/3 neurons of the primary visual cortex in mice using two-photon calcium imaging. We found that surround suppression was significantly asymmetric in 17% of the visually responsive neurons examined. Furthermore, the magnitude of asymmetry was correlated with orientation selectivity. Our results demonstrate that neurons in mouse primary visual cortex are differentially sensitive to the addition of elements in the surround and that individual neurons can be described as being either uniformly suppressed by the surround, end-stopped, or side-stopped. NEW & NOTEWORTHY Perception of visual scenes requires active integration of both local and global features to successfully segment objects from the background. Although the underlying circuitry and development of perceptual inference is not well understood, converging evidence indicates that asymmetry and diversity in surround modulation are likely fundamental for these computations. We determined that these key features are present in the mouse. Our results support the mouse as a model to explore the neural basis and development of surround modulation as it relates to perceptual inference.
Collapse
Affiliation(s)
- Jason M Samonds
- Center for the Neural Basis of Cognition, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Computer Science Department, Carnegie Mellon University , Pittsburgh, Pennsylvania
| | - Berquin D Feese
- Center for the Neural Basis of Cognition, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Department of Biological Sciences, Carnegie Mellon University , Pittsburgh, Pennsylvania
| | - Tai Sing Lee
- Center for the Neural Basis of Cognition, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Computer Science Department, Carnegie Mellon University , Pittsburgh, Pennsylvania
| | - Sandra J Kuhlman
- Center for the Neural Basis of Cognition, Carnegie Mellon University , Pittsburgh, Pennsylvania.,Department of Biological Sciences, Carnegie Mellon University , Pittsburgh, Pennsylvania
| |
Collapse
|
38
|
Sawada T, Petrov AA. The divisive normalization model of V1 neurons: a comprehensive comparison of physiological data and model predictions. J Neurophysiol 2017; 118:3051-3091. [PMID: 28835531 DOI: 10.1152/jn.00821.2016] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Revised: 08/21/2017] [Accepted: 08/21/2017] [Indexed: 01/24/2023] Open
Abstract
The physiological responses of simple and complex cells in the primary visual cortex (V1) have been studied extensively and modeled at different levels. At the functional level, the divisive normalization model (DNM; Heeger DJ. Vis Neurosci 9: 181-197, 1992) has accounted for a wide range of single-cell recordings in terms of a combination of linear filtering, nonlinear rectification, and divisive normalization. We propose standardizing the formulation of the DNM and implementing it in software that takes static grayscale images as inputs and produces firing rate responses as outputs. We also review a comprehensive suite of 30 empirical phenomena and report a series of simulation experiments that qualitatively replicate dozens of key experiments with a standard parameter set consistent with physiological measurements. This systematic approach identifies novel falsifiable predictions of the DNM. We show how the model simultaneously satisfies the conflicting desiderata of flexibility and falsifiability. Our key idea is that, while adjustable parameters are needed to accommodate the diversity across neurons, they must be fixed for a given individual neuron. This requirement introduces falsifiable constraints when this single neuron is probed with multiple stimuli. We also present mathematical analyses and simulation experiments that explicate some of these constraints.
Collapse
Affiliation(s)
- Tadamasa Sawada
- School of Psychology, National Research University Higher School of Economics, Moscow, Russia; and
| | | |
Collapse
|
39
|
Hoseini MS, Pobst J, Wright N, Clawson W, Shew W, Wessel R. Induced cortical oscillations in turtle cortex are coherent at the mesoscale of population activity, but not at the microscale of the membrane potential of neurons. J Neurophysiol 2017; 118:2579-2591. [PMID: 28794194 DOI: 10.1152/jn.00375.2017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Revised: 08/04/2017] [Accepted: 08/06/2017] [Indexed: 01/30/2023] Open
Abstract
Bursts of oscillatory neural activity have been hypothesized to be a core mechanism by which remote brain regions can communicate. Such a hypothesis raises the question to what extent oscillations are coherent across spatially distant neural populations. To address this question, we obtained local field potential (LFP) and membrane potential recordings from the visual cortex of turtle in response to visual stimulation of the retina. The time-frequency analysis of these recordings revealed pronounced bursts of oscillatory neural activity and a large trial-to-trial variability in the spectral and temporal properties of the observed oscillations. First, local bursts of oscillations varied from trial to trial in both burst duration and peak frequency. Second, oscillations of a given recording site were not autocoherent; i.e., the phase did not progress linearly in time. Third, LFP oscillations at spatially separate locations within the visual cortex were more phase coherent in the presence of visual stimulation than during ongoing activity. In contrast, the membrane potential oscillations from pairs of simultaneously recorded pyramidal neurons showed smaller phase coherence, which did not change when switching from black screen to visual stimulation. In conclusion, neuronal oscillations at distant locations in visual cortex are coherent at the mesoscale of population activity, but coherence is largely absent at the microscale of the membrane potential of neurons.NEW & NOTEWORTHY Coherent oscillatory neural activity has long been hypothesized as a potential mechanism for communication across locations in the brain. In this study we confirm the existence of coherent oscillations at the mesoscale of integrated cortical population activity. However, at the microscopic level of neurons, we find no evidence for coherence among oscillatory membrane potential fluctuations. These results raise questions about the applicability of the communication through coherence hypothesis to the level of the membrane potential.
Collapse
Affiliation(s)
- Mahmood S Hoseini
- Department of Physics, Washington University, Saint Louis, Missouri;
| | - Jeff Pobst
- Department of Physics, Washington University, Saint Louis, Missouri
| | - Nathaniel Wright
- Department of Physics, Washington University, Saint Louis, Missouri
| | - Wesley Clawson
- Department of Electrical Engineering, University of Arkansas, Fayetteville, Arkansas; and
| | - Woodrow Shew
- Department of Physics, University of Arkansas, Fayetteville, Arkansas
| | - Ralf Wessel
- Department of Physics, Washington University, Saint Louis, Missouri
| |
Collapse
|
40
|
Kato HK, Asinof SK, Isaacson JS. Network-Level Control of Frequency Tuning in Auditory Cortex. Neuron 2017; 95:412-423.e4. [PMID: 28689982 DOI: 10.1016/j.neuron.2017.06.019] [Citation(s) in RCA: 122] [Impact Index Per Article: 17.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Revised: 05/10/2017] [Accepted: 06/09/2017] [Indexed: 11/17/2022]
Abstract
Lateral inhibition is a fundamental circuit operation that sharpens the tuning properties of cortical neurons. This operation is classically attributed to an increase in GABAergic synaptic input triggered by non-preferred stimuli. Here we use in vivo whole-cell recording and two-photon Ca2+ imaging in awake mice to show that lateral inhibition shapes frequency tuning in primary auditory cortex via an unconventional mechanism: non-preferred tones suppress both excitatory and inhibitory synaptic inputs onto layer 2/3 cells ("network suppression"). Moreover, optogenetic inactivation of inhibitory interneurons elicits a paradoxical increase in inhibitory synaptic input. These results indicate that GABAergic interneurons regulate cortical activity indirectly via the suppression of recurrent excitation. Furthermore, the network suppression underlying lateral inhibition was blocked by inactivation of somatostatin-expressing interneurons (SOM cells), but not parvalbumin-expressing interneurons (PV cells). Together, these findings reveal that SOM cells govern lateral inhibition and control cortical frequency tuning through the regulation of reverberating recurrent circuits.
Collapse
Affiliation(s)
- Hiroyuki K Kato
- Center for Neural Circuits and Behavior and Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA.
| | - Samuel K Asinof
- Center for Neural Circuits and Behavior and Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
| | - Jeffry S Isaacson
- Center for Neural Circuits and Behavior and Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA.
| |
Collapse
|
41
|
Binocular Disparity Selectivity Weakened after Monocular Deprivation in Mouse V1. J Neurosci 2017; 37:6517-6526. [PMID: 28576937 DOI: 10.1523/jneurosci.1193-16.2017] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2016] [Revised: 04/23/2017] [Accepted: 05/09/2017] [Indexed: 11/21/2022] Open
Abstract
Experiences during the critical period sculpt the circuitry within the neocortex, leading to changes in the functional responses of sensory neurons. Monocular deprivation (MD) during the visual critical period causes shifts in ocular preference, or dominance, toward the open eye in primary visual cortex (V1) and disrupts the normal development of acuity. In carnivores and primates, MD also disrupts the emergence of binocular disparity selectivity, a cue resulting from integrating ocular inputs. This disruption may be a result of the increase in neurons driven exclusively by the open eye that follows deprivation or a result of a mismatch in the convergence of ocular inputs. To distinguish between these possibilities, we measured the ocular dominance (OD) and disparity selectivity of neurons from male and female mouse V1 following MD. Normal mouse V1 neurons are dominated by contralateral eye input and contralateral eye deprivation shifts mouse V1 neurons toward more balanced responses between the eyes. This shift toward binocularity, as assayed by OD, decreased disparity sensitivity. MD did not alter the initial maturation of binocularity, as disparity selectivity before the MD was indistinguishable from normal mature animals. Decreased disparity tuning was most pronounced in binocular and ipsilaterally biased neurons, which are the populations that have undergone the largest shifts in OD. In concert with the decline in disparity selectivity, we observed a shift toward lower spatial frequency selectivity for the ipsilateral eye following MD. These results suggest an emergence of novel synaptic inputs during MD that disrupt the representation of disparity selectivity.SIGNIFICANCE STATEMENT We demonstrate that monocular deprivation during the developmental critical period impairs binocular integration in mouse primary visual cortex. This impairment occurs despite an increase in the degree to which neurons become more binocular. We further demonstrate that our deprivation did not impair the maturation of disparity selectivity. Disparity selectivity has already reached a matured level before the monocular deprivation. The loss of disparity tuning is primarily observed in neurons dominated by the open eye, suggesting a link between altered inputs and loss of disparity sensitivity. These results suggest that new inputs following deprivation may not maintain the precise spatial relationship between the two eye inputs required for disparity selectivity.
Collapse
|
42
|
Roland PE, Bonde LH, Forsberg LE, Harvey MA. Breaking the Excitation-Inhibition Balance Makes the Cortical Network's Space-Time Dynamics Distinguish Simple Visual Scenes. Front Syst Neurosci 2017; 11:14. [PMID: 28377701 PMCID: PMC5360108 DOI: 10.3389/fnsys.2017.00014] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2016] [Accepted: 03/03/2017] [Indexed: 11/21/2022] Open
Abstract
Brain dynamics are often taken to be temporal dynamics of spiking and membrane potentials in a balanced network. Almost all evidence for a balanced network comes from recordings of cell bodies of few single neurons, neglecting more than 99% of the cortical network. We examined the space-time dynamics of excitation and inhibition simultaneously in dendrites and axons over four visual areas of ferrets exposed to visual scenes with stationary and moving objects. The visual stimuli broke the tight balance between excitation and inhibition such that the network exhibited longer episodes of net excitation subsequently balanced by net inhibition, in contrast to a balanced network. Locally in all four areas the amount of net inhibition matched the amount of net excitation with a delay of 125 ms. The space-time dynamics of excitation-inhibition evolved to reduce the complexity of neuron interactions over the whole network to a flow on a low-(3)-dimensional manifold within 80 ms. In contrast to the pure temporal dynamics, the low dimensional flow evolved to distinguish the simple visual scenes.
Collapse
Affiliation(s)
- Per E Roland
- Faculty of Health Sciences, Center for Neuroscience, University of Copenhagen Copenhagen, Denmark
| | - Lars H Bonde
- Faculty of Health Sciences, Center for Neuroscience, University of Copenhagen Copenhagen, Denmark
| | - Lars E Forsberg
- Faculty of Health Sciences, Center for Neuroscience, University of Copenhagen Copenhagen, Denmark
| | - Michael A Harvey
- Department of Physiology, University of Fribourg Fribourg, Switzerland
| |
Collapse
|
43
|
Scholl B, Pattadkal JJ, Rowe A, Priebe NJ. Functional characterization and spatial clustering of visual cortical neurons in the predatory grasshopper mouse Onychomys arenicola. J Neurophysiol 2017; 117:910-918. [PMID: 27927787 PMCID: PMC5338624 DOI: 10.1152/jn.00779.2016] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Accepted: 12/05/2016] [Indexed: 11/22/2022] Open
Abstract
Mammalian neocortical circuits are functionally organized such that the selectivity of individual neurons systematically shifts across the cortical surface, forming a continuous map. Maps of the sensory space exist in cortex, such as retinotopic maps in the visual system or tonotopic maps in the auditory system, but other functional response properties also may be similarly organized. For example, many carnivores and primates possess a map for orientation selectivity in primary visual cortex (V1), whereas mice, rabbits, and the gray squirrel lack orientation maps. In this report we show that a carnivorous rodent with predatory behaviors, the grasshopper mouse (Onychomys arenicola), lacks a canonical columnar organization of orientation preference in V1; however, neighboring neurons within 50 μm exhibit related tuning preference. Using a combination of two-photon microscopy and extracellular electrophysiology, we demonstrate that the functional organization of visual cortical neurons in the grasshopper mouse is largely the same as in the C57/BL6 laboratory mouse. We also find similarity in the selectivity for stimulus orientation, direction, and spatial frequency. Our results suggest that the properties of V1 neurons across rodent species are largely conserved.NEW & NOTEWORTHY Carnivores and primates possess a map for orientation selectivity in primary visual cortex (V1), whereas rodents and lagomorphs lack this organization. We examine, for the first time, V1 of a wild carnivorous rodent with predatory behaviors, the grasshopper mouse (Onychomys arenicola). We demonstrate the cellular organization of V1 in the grasshopper mouse is largely the same as the C57/BL6 laboratory mouse, suggesting that V1 neuron properties across rodent species are largely conserved.
Collapse
Affiliation(s)
- Benjamin Scholl
- Functional Architecture and Development of Cerebral Cortex, Max Planck Florida Institute, Jupiter, Florida
| | - Jagruti J Pattadkal
- Department of Neuroscience, The University of Texas at Austin, Austin, Texas; and
| | - Ashlee Rowe
- Department of Integrative Biology and Neuroscience Program, Michigan State University, East Lansing, Michigan
| | - Nicholas J Priebe
- Department of Neuroscience, The University of Texas at Austin, Austin, Texas; and
| |
Collapse
|
44
|
Cardin JA. More than meets the eye. Nat Neurosci 2016; 19:984-6. [DOI: 10.1038/nn.4341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
45
|
Denève S, Machens CK. Efficient codes and balanced networks. Nat Neurosci 2016; 19:375-82. [PMID: 26906504 DOI: 10.1038/nn.4243] [Citation(s) in RCA: 242] [Impact Index Per Article: 30.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2015] [Accepted: 01/13/2016] [Indexed: 12/12/2022]
Abstract
Recent years have seen a growing interest in inhibitory interneurons and their circuits. A striking property of cortical inhibition is how tightly it balances excitation. Inhibitory currents not only match excitatory currents on average, but track them on a millisecond time scale, whether they are caused by external stimuli or spontaneous fluctuations. We review, together with experimental evidence, recent theoretical approaches that investigate the advantages of such tight balance for coding and computation. These studies suggest a possible revision of the dominant view that neurons represent information with firing rates corrupted by Poisson noise. Instead, tight excitatory/inhibitory balance may be a signature of a highly cooperative code, orders of magnitude more precise than a Poisson rate code. Moreover, tight balance may provide a template that allows cortical neurons to construct high-dimensional population codes and learn complex functions of their inputs.
Collapse
Affiliation(s)
- Sophie Denève
- Laboratoire de Neurosciences Cognitives, École Normale Supérieure, Paris, France
| | | |
Collapse
|
46
|
Orientation selectivity and the functional clustering of synaptic inputs in primary visual cortex. Nat Neurosci 2016; 19:1003-9. [PMID: 27294510 PMCID: PMC5240628 DOI: 10.1038/nn.4323] [Citation(s) in RCA: 151] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2016] [Accepted: 05/11/2016] [Indexed: 12/11/2022]
Abstract
The majority of neurons in primary visual cortex are tuned for stimulus orientation, but the factors that account for the range of orientation selectivities exhibited by cortical neurons remain unclear. To address this issue, we used in vivo 2-photon calcium imaging to characterize the orientation tuning and spatial arrangement of synaptic inputs to the dendritic spines of individual pyramidal neurons in layer 2/3 of ferret visual cortex. The summed synaptic input to individual neurons reliably predicted the neuron’s orientation preference, but did not account for differences in orientation selectivity among neurons. These differences reflected a robust input-output nonlinearity that could not be explained by spike threshold alone, and was strongly correlated with the spatial clustering of co-tuned synaptic inputs within the dendritic field. Dendritic branches with more co-tuned synaptic clusters exhibited greater rates of local dendritic calcium events supporting a prominent role for functional clustering of synaptic inputs in dendritic nonlinearities that shape orientation selectivity.
Collapse
|
47
|
Kremkow J, Perrinet LU, Monier C, Alonso JM, Aertsen A, Frégnac Y, Masson GS. Push-Pull Receptive Field Organization and Synaptic Depression: Mechanisms for Reliably Encoding Naturalistic Stimuli in V1. Front Neural Circuits 2016; 10:37. [PMID: 27242445 PMCID: PMC4862982 DOI: 10.3389/fncir.2016.00037] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2016] [Accepted: 04/25/2016] [Indexed: 11/13/2022] Open
Abstract
Neurons in the primary visual cortex are known for responding vigorously but with high variability to classical stimuli such as drifting bars or gratings. By contrast, natural scenes are encoded more efficiently by sparse and temporal precise spiking responses. We used a conductance-based model of the visual system in higher mammals to investigate how two specific features of the thalamo-cortical pathway, namely push-pull receptive field organization and fast synaptic depression, can contribute to this contextual reshaping of V1 responses. By comparing cortical dynamics evoked respectively by natural vs. artificial stimuli in a comprehensive parametric space analysis, we demonstrate that the reliability and sparseness of the spiking responses during natural vision is not a mere consequence of the increased bandwidth in the sensory input spectrum. Rather, it results from the combined impacts of fast synaptic depression and push-pull inhibition, the later acting for natural scenes as a form of “effective” feed-forward inhibition as demonstrated in other sensory systems. Thus, the combination of feedforward-like inhibition with fast thalamo-cortical synaptic depression by simple cells receiving a direct structured input from thalamus composes a generic computational mechanism for generating a sparse and reliable encoding of natural sensory events.
Collapse
Affiliation(s)
- Jens Kremkow
- Institut de Neurosciences de la Timone, UMR 7289, Centre National de la Recherche Scientifique - Aix-Marseille UniversitéMarseille, France; Neurobiology and Biophysics, Faculty of Biology, University of FreiburgFreiburg, Germany; Bernstein Center Freiburg, University of FreiburgFreiburg, Germany; Department of Biological Sciences, State University of New York (SUNY-Optometry)New York, NY, USA
| | - Laurent U Perrinet
- Institut de Neurosciences de la Timone, UMR 7289, Centre National de la Recherche Scientifique - Aix-Marseille Université Marseille, France
| | - Cyril Monier
- Unité de Neurosciences, Information et Complexité, UPR Centre National de la Recherche Scientifique 3293 Gif-sur-Yvette, France
| | - Jose-Manuel Alonso
- Department of Biological Sciences, State University of New York (SUNY-Optometry) New York, NY, USA
| | - Ad Aertsen
- Neurobiology and Biophysics, Faculty of Biology, University of FreiburgFreiburg, Germany; Bernstein Center Freiburg, University of FreiburgFreiburg, Germany
| | - Yves Frégnac
- Unité de Neurosciences, Information et Complexité, UPR Centre National de la Recherche Scientifique 3293 Gif-sur-Yvette, France
| | - Guillaume S Masson
- Institut de Neurosciences de la Timone, UMR 7289, Centre National de la Recherche Scientifique - Aix-Marseille Université Marseille, France
| |
Collapse
|
48
|
Bharmauria V, Bachatene L, Ouelhazi A, Cattan S, Chanauria N, Etindele-Sosso FA, Rouat J, Molotchnikoff S. Interplay of orientation selectivity and the power of low- and high-gamma bands in the cat primary visual cortex. Neurosci Lett 2016; 620:14-9. [PMID: 27033667 DOI: 10.1016/j.neulet.2016.03.033] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Revised: 03/01/2016] [Accepted: 03/21/2016] [Indexed: 01/28/2023]
Abstract
Gamma oscillations are ubiquitous in brain and are believed to be inevitable for information processing in brain. Here, we report that distinct bands (low, 30-40Hz and high gamma, 60-80Hz) of stimulus-triggered gamma oscillations are systematically linked to the orientation selectivity index (OSI) of neurons in the cat primary visual cortex. The gamma-power is high for the highly selective neurons in the low-gamma band, whereas it is high for the broadly selective neurons in the high-gamma band. We suggest that the low-gamma band is principally implicated in feed-forward excitatory flow, whereas the high-gamma band governs the flow of this excitation.
Collapse
Affiliation(s)
- Vishal Bharmauria
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada
| | - Lyes Bachatene
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada
| | - Afef Ouelhazi
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada
| | - Sarah Cattan
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada
| | - Nayan Chanauria
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada
| | - Faustin Armel Etindele-Sosso
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada
| | - Jean Rouat
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada; Département de Génie Électrique et Génie Informatique, Université de Sherbrooke, Sherbrooke, QC, Canada
| | - Stéphane Molotchnikoff
- Neurophysiology of Visual System, Université de Montréal, Département de Sciences Biologiques, Montréal, QC, Canada; Département de Génie Électrique et Génie Informatique, Université de Sherbrooke, Sherbrooke, QC, Canada.
| |
Collapse
|
49
|
NMDA Receptors Multiplicatively Scale Visual Signals and Enhance Directional Motion Discrimination in Retinal Ganglion Cells. Neuron 2016; 89:1277-1290. [PMID: 26948896 DOI: 10.1016/j.neuron.2016.02.013] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2015] [Revised: 11/25/2015] [Accepted: 01/15/2016] [Indexed: 11/24/2022]
Abstract
Postsynaptic responses in many CNS neurons are typically small and variable, often making it difficult to distinguish physiologically relevant signals from background noise. To extract salient information, neurons are thought to integrate multiple synaptic inputs and/or selectively amplify specific synaptic activation patterns. Here, we present evidence for a third strategy: directionally selective ganglion cells (DSGCs) in the mouse retina multiplicatively scale visual signals via a mechanism that requires both nonlinear NMDA receptor (NMDAR) conductances in DSGC dendrites and directionally tuned inhibition provided by the upstream retinal circuitry. Postsynaptic multiplication enables DSGCs to discriminate visual motion more accurately in noisy visual conditions without compromising directional tuning. These findings demonstrate a novel role for NMDARs in synaptic processing and provide new insights into how synaptic and network features interact to accomplish physiologically relevant neural computations.
Collapse
|
50
|
Litwin-Kumar A, Rosenbaum R, Doiron B. Inhibitory stabilization and visual coding in cortical circuits with multiple interneuron subtypes. J Neurophysiol 2016; 115:1399-409. [PMID: 26740531 DOI: 10.1152/jn.00732.2015] [Citation(s) in RCA: 78] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2015] [Accepted: 01/04/2016] [Indexed: 01/30/2023] Open
Abstract
Recent anatomical and functional characterization of cortical inhibitory interneurons has highlighted the diverse computations supported by different subtypes of interneurons. However, most theoretical models of cortex do not feature multiple classes of interneurons and rather assume a single homogeneous population. We study the dynamics of recurrent excitatory-inhibitory model cortical networks with parvalbumin (PV)-, somatostatin (SOM)-, and vasointestinal peptide-expressing (VIP) interneurons, with connectivity properties motivated by experimental recordings from mouse primary visual cortex. Our theory describes conditions under which the activity of such networks is stable and how perturbations of distinct neuronal subtypes recruit changes in activity through recurrent synaptic projections. We apply these conclusions to study the roles of each interneuron subtype in disinhibition, surround suppression, and subtractive or divisive modulation of orientation tuning curves. Our calculations and simulations determine the architectural and stimulus tuning conditions under which cortical activity consistent with experiment is possible. They also lead to novel predictions concerning connectivity and network dynamics that can be tested via optogenetic manipulations. Our work demonstrates that recurrent inhibitory dynamics must be taken into account to fully understand many properties of cortical dynamics observed in experiments.
Collapse
Affiliation(s)
- Ashok Litwin-Kumar
- Center for Theoretical Neuroscience, Columbia University, New York, New York; Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania; and
| | - Robert Rosenbaum
- Department of Applied and Computational Mathematics and Statistics, University of Notre Dame, Notre Dame, Indiana; Interdisciplinary Center for Network Science and Applications, University of Notre Dame, Notre Dame, Indiana; Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania; and
| | - Brent Doiron
- Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania; and Center for the Neural Basis of Cognition, Pittsburgh, Pennsylvania
| |
Collapse
|