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For: Finn TE, Wang L, Smolilo D, Smith NA, White R, Chaudhury A, Dennis ES, Wang MB. Transgene expression and transgene-induced silencing in diploid and autotetraploid Arabidopsis. Genetics 2011;187:409-23. [PMID: 21078688 PMCID: PMC3030486 DOI: 10.1534/genetics.110.124370] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2010] [Accepted: 10/26/2010] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Zhang D, Jue D, Smith N, Zhong C, Finnegan EJ, de Feyter R, Wang MB, Greaves I. Asymmetric bulges within hairpin RNA transgenes influence small RNA size, secondary siRNA production and viral defence. Nucleic Acids Res 2024;52:9904-9916. [PMID: 38967001 PMCID: PMC11381321 DOI: 10.1093/nar/gkae573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 05/28/2024] [Accepted: 06/24/2024] [Indexed: 07/06/2024]  Open
2
Hassan MM, Tenazas F, Williams A, Chiu JW, Robin C, Russell DA, Golz JF. Minimizing IP issues associated with gene constructs encoding the Bt toxin - a case study. BMC Biotechnol 2024;24:37. [PMID: 38825715 PMCID: PMC11145813 DOI: 10.1186/s12896-024-00864-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2024] [Accepted: 05/27/2024] [Indexed: 06/04/2024]  Open
3
Nucleotide mismatches prevent intrinsic self-silencing of hpRNA transgenes to enhance RNAi stability in plants. Nat Commun 2022;13:3926. [PMID: 35798725 PMCID: PMC9263138 DOI: 10.1038/s41467-022-31641-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Accepted: 06/27/2022] [Indexed: 11/10/2022]  Open
4
Božunović J, Milutinović M, Aničić N, Skorić M, Matekalo D, Živković S, Dragićević M, Filipović B, Banjanac T, Petrović L, Mišić D. Functional Characterization of Genes Coding for Novel β-D-Glucosidases Involved in the Initial Step of Secoiridoid Glucosides Catabolism in Centaurium erythraea Rafn. FRONTIERS IN PLANT SCIENCE 2022;13:914138. [PMID: 35812935 PMCID: PMC9260424 DOI: 10.3389/fpls.2022.914138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Accepted: 05/23/2022] [Indexed: 06/15/2023]
5
El-Sappah AH, Yan K, Huang Q, Islam MM, Li Q, Wang Y, Khan MS, Zhao X, Mir RR, Li J, El-Tarabily KA, Abbas M. Comprehensive Mechanism of Gene Silencing and Its Role in Plant Growth and Development. FRONTIERS IN PLANT SCIENCE 2021;12:705249. [PMID: 34589097 PMCID: PMC8475493 DOI: 10.3389/fpls.2021.705249] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Accepted: 08/10/2021] [Indexed: 05/19/2023]
6
Anjanappa RB, Gruissem W. Current progress and challenges in crop genetic transformation. JOURNAL OF PLANT PHYSIOLOGY 2021;261:153411. [PMID: 33872932 DOI: 10.1016/j.jplph.2021.153411] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 03/29/2021] [Accepted: 03/29/2021] [Indexed: 05/14/2023]
7
An Arabidopsis AT-hook motif nuclear protein mediates somatic embryogenesis and coinciding genome duplication. Nat Commun 2021;12:2508. [PMID: 33947865 PMCID: PMC8096963 DOI: 10.1038/s41467-021-22815-8] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Accepted: 03/30/2021] [Indexed: 02/02/2023]  Open
8
Iannicelli J, Guariniello J, Tossi V, Regalado J, Di Ciaccio L, van Baren C, Pitta Álvarez S, Escandón A. The “polyploid effect” in the breeding of aromatic and medicinal species. SCIENTIA HORTICULTURAE 2020. [PMID: 0 DOI: 10.1016/j.scienta.2019.108854] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
9
Schumann U, Lee JM, Smith NA, Zhong C, Zhu JK, Dennis ES, Millar AA, Wang MB. DEMETER plays a role in DNA demethylation and disease response in somatic tissues of Arabidopsis. Epigenetics 2019;14:1074-1087. [PMID: 31189415 PMCID: PMC6773409 DOI: 10.1080/15592294.2019.1631113] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Revised: 05/28/2019] [Accepted: 06/05/2019] [Indexed: 10/26/2022]  Open
10
Imran M, Barboza AL, Asad S, Khalid ZM, Mukhtar Z. Expression patterns of cp4-epsps gene in diverse transgenic Saccharum officinarum L. genotypes. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019;25:779-786. [PMID: 31168239 PMCID: PMC6522613 DOI: 10.1007/s12298-019-00650-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Revised: 01/25/2019] [Accepted: 02/13/2019] [Indexed: 06/09/2023]
11
Prasetyo FHH, Sugiharto B, Ermawati N. Cloning, transformation and expression of cell cycle-associated protein kinase OsWee1 in indica rice (Oryza sativa L.). J Genet Eng Biotechnol 2019;16:573-579. [PMID: 30733775 PMCID: PMC6353929 DOI: 10.1016/j.jgeb.2018.10.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Revised: 09/23/2018] [Accepted: 10/01/2018] [Indexed: 11/13/2022]
12
Wu Q, Smith NA, Zhang D, Zhou C, Wang MB. Root-Specific Expression of a Jacalin Lectin Family Protein Gene Requires a Transposable Element Sequence in the Promoter. Genes (Basel) 2018;9:E550. [PMID: 30428604 PMCID: PMC6266147 DOI: 10.3390/genes9110550] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Revised: 11/06/2018] [Accepted: 11/07/2018] [Indexed: 12/15/2022]  Open
13
Li Y, Li L, Qian Z, Lin B, Chen J, Luo Y, Qu J, Raj JU, Gou D. Phosphatidylinositol 3-Kinase-DNA Methyltransferase 1-miR-1281-Histone Deacetylase 4 Regulatory Axis Mediates Platelet-Derived Growth Factor-Induced Proliferation and Migration of Pulmonary Artery Smooth Muscle Cells. J Am Heart Assoc 2018;7:e007572. [PMID: 29514810 PMCID: PMC5907547 DOI: 10.1161/jaha.117.007572] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 01/03/2018] [Indexed: 12/13/2022]
14
Giampieri F, Gasparrini M, Forbes-Hernandez TY, Mazzoni L, Capocasa F, Sabbadini S, Alvarez-Suarez JM, Afrin S, Rosati C, Pandolfini T, Molesini B, Sánchez-Sevilla JF, Amaya I, Mezzetti B, Battino M. Overexpression of the Anthocyanidin Synthase Gene in Strawberry Enhances Antioxidant Capacity and Cytotoxic Effects on Human Hepatic Cancer Cells. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2018;66:581-592. [PMID: 29291263 DOI: 10.1021/acs.jafc.7b04177] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
15
Schumann U, Lee J, Kazan K, Ayliffe M, Wang MB. DNA-Demethylase Regulated Genes Show Methylation-Independent Spatiotemporal Expression Patterns. FRONTIERS IN PLANT SCIENCE 2017;8:1449. [PMID: 28894455 PMCID: PMC5581395 DOI: 10.3389/fpls.2017.01449] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Accepted: 08/04/2017] [Indexed: 05/12/2023]
16
Okumura A, Shimada A, Yamasaki S, Horino T, Iwata Y, Koizumi N, Nishihara M, Mishiba KI. CaMV-35S promoter sequence-specific DNA methylation in lettuce. PLANT CELL REPORTS 2016;35:43-51. [PMID: 26373653 DOI: 10.1007/s00299-015-1865-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2015] [Revised: 08/08/2015] [Accepted: 09/03/2015] [Indexed: 05/28/2023]
17
del Pozo JC, Ramirez-Parra E. Whole genome duplications in plants: an overview from Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2015;66:6991-7003. [PMID: 26417017 DOI: 10.1093/jxb/erv432] [Citation(s) in RCA: 97] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
18
Rajeevkumar S, Anunanthini P, Sathishkumar R. Epigenetic silencing in transgenic plants. FRONTIERS IN PLANT SCIENCE 2015;6:693. [PMID: 26442010 PMCID: PMC4564723 DOI: 10.3389/fpls.2015.00693] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2015] [Accepted: 08/21/2015] [Indexed: 05/18/2023]
19
Zahid K, Zhao JH, Smith NA, Schumann U, Fang YY, Dennis ES, Zhang R, Guo HS, Wang MB. Nicotiana small RNA sequences support a host genome origin of cucumber mosaic virus satellite RNA. PLoS Genet 2015;11:e1004906. [PMID: 25568943 PMCID: PMC4287446 DOI: 10.1371/journal.pgen.1004906] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Accepted: 11/20/2014] [Indexed: 01/22/2023]  Open
20
Le TN, Schumann U, Smith NA, Tiwari S, Au PCK, Zhu QH, Taylor JM, Kazan K, Llewellyn DJ, Zhang R, Dennis ES, Wang MB. DNA demethylases target promoter transposable elements to positively regulate stress responsive genes in Arabidopsis. Genome Biol 2014;15:458. [PMID: 25228471 PMCID: PMC4189188 DOI: 10.1186/s13059-014-0458-3] [Citation(s) in RCA: 170] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Accepted: 09/01/2014] [Indexed: 11/12/2022]  Open
21
Distance effect of matrix attachment regions on transgene expression in stably transfected Chinese hamster ovary cells. Biotechnol Lett 2014;36:1937-43. [PMID: 24930099 DOI: 10.1007/s10529-014-1563-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2014] [Accepted: 05/19/2014] [Indexed: 02/06/2023]
22
Lavania UC, Srivastava S, Lavania S, Basu S, Misra NK, Mukai Y. Autopolyploidy differentially influences body size in plants, but facilitates enhanced accumulation of secondary metabolites, causing increased cytosine methylation. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012;71:539-49. [PMID: 22449082 DOI: 10.1111/j.1365-313x.2012.05006.x] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
23
Ploidy and Hybridity Effects on Growth Vigor and Gene Expression in Arabidopsis thaliana Hybrids and Their Parents. G3-GENES GENOMES GENETICS 2012;2:505-13. [PMID: 22540042 PMCID: PMC3337479 DOI: 10.1534/g3.112.002162] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/11/2011] [Accepted: 02/22/2012] [Indexed: 11/18/2022]
24
Sharma AK. Genomics, epigenomics and chromatin. THE NUCLEUS 2011. [DOI: 10.1007/s13237-011-0030-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]  Open
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