1
|
Boonpeng C, Pischom M, Butrid P, Noikrad S, Boonpragob K. Laboratory and field measurements of water relations, photosynthetic parameters, and hydration traits in macrolichens in a tropical lower montane rainforest in Thailand. JOURNAL OF PLANT RESEARCH 2024; 137:641-658. [PMID: 38619624 DOI: 10.1007/s10265-024-01542-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Accepted: 04/07/2024] [Indexed: 04/16/2024]
Abstract
Ecophysiological studies of lichens in tropical Asia are rare, and additional studies can increase the understanding of lichen life in this region. The main aim of this study was to observe the relationships between water availability and photosynthetic parameters, as well as hydration trait parameters, in macrolichens during the rainy and dry seasons in a tropical forest. A total of 11 lichen species growing in a lower montane rainforest in Thailand were collected and studied. The results clearly showed that the specific thallus mass (STM), net photosynthetic rate (Pn), the potential quantum yield of primary photochemistry (Fv/Fm), chlorophyll content, and carotenoid content of almost all lichens were lower in the dry season than in the rainy season. Field measurements in the dry season revealed that only the foliose chlorolichen Parmotrema tinctorum was metabolically active and exhibited slight carbon assimilation. In the rainy season, all lichens started their photosynthesis in the early morning, reached maximal values, declined, and ceased when the thalli desiccated. The photosynthetically active period of the lichens was approximately 2-3 h in the morning, and the activities of the cyanolichens ended approximately 30 min after the chlorolichens. The hydration trait parameters, including the STM, maximal water content (WCmax), and water holding capacity (WHC), were greater in the cyanolichens. In addition, the maximal Pn (Pnmax) and optimal water content (WCopt) for Pn were also greater in the cyanolichens, but the maximal Fv/Fm (Fv/Fmmax) was lower. The cyanolichens compensated for their inability to use humid air to restore photosynthesis by having higher water content and storage, higher photosynthetic rates, and longer photosynthetically active periods. This study provides additional insights into lichen ecophysiology in tropical forests that can be useful for lichen conservation.
Collapse
Affiliation(s)
- Chaiwat Boonpeng
- Department of Biology, Faculty of Science, Ramkhamhaeng University, Hua Mark, Bang Kapi, Bangkok, 10240, Thailand.
- Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Hua Mark, Bang Kapi, Bangkok, 10240, Thailand.
| | - Marisa Pischom
- Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Hua Mark, Bang Kapi, Bangkok, 10240, Thailand
| | - Pawanrat Butrid
- Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Hua Mark, Bang Kapi, Bangkok, 10240, Thailand
| | - Sutatip Noikrad
- Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Hua Mark, Bang Kapi, Bangkok, 10240, Thailand
| | - Kansri Boonpragob
- Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Hua Mark, Bang Kapi, Bangkok, 10240, Thailand
| |
Collapse
|
2
|
Daminova AG, Leksin IY, Khabibrakhmanova VR, Gurjanov OP, Galeeva EI, Trifonova TV, Khamatgalimov AR, Beckett RP, Minibayeva FV. The Roles of the Anthraquinone Parietin in the Tolerance to Desiccation of the Lichen Xanthoria parietina: Physiology and Anatomy of the Pale and Bright-Orange Thalli. Int J Mol Sci 2024; 25:7067. [PMID: 39000176 PMCID: PMC11240919 DOI: 10.3390/ijms25137067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 06/21/2024] [Accepted: 06/25/2024] [Indexed: 07/16/2024] Open
Abstract
Lichens are symbiotic organisms that effectively survive in harsh environments, including arid regions. Maintaining viability with an almost complete loss of water and the rapid restoration of metabolism during rehydration distinguishes lichens from most eukaryotic organisms. The lichen Xanthoria parietina is known to have high stress tolerance, possessing diverse defense mechanisms, including the presence of the bright-orange pigment parietin. While several studies have demonstrated the photoprotective and antioxidant properties of this anthraquinone, the role of parietin in the tolerance of lichens to desiccation is not clear yet. Thalli, which are exposed to solar radiation and become bright orange, may require enhanced desiccation tolerance. Here, we showed differences in the anatomy of naturally pale and bright-orange thalli of X. parietina and visualized parietin crystals on the surface of the upper cortex. Parietin was extracted from bright-orange thalli by acetone rinsing and quantified using HPLC. Although acetone rinsing did not affect PSII activity, thalli without parietin had higher levels of lipid peroxidation and a lower membrane stability index in response to desiccation. Furthermore, highly pigmented thalli possess thicker cell walls and, according to thermogravimetric analysis, higher water-holding capacities than pale thalli. Thus, parietin may play a role in desiccation tolerance by stabilizing mycobiont membranes, providing an antioxidative defense, and changing the morphology of the upper cortex of X. parietina.
Collapse
Affiliation(s)
- Amina G. Daminova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| | - Ilya Y. Leksin
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| | - Venera R. Khabibrakhmanova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| | - Oleg P. Gurjanov
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| | - Ekaterina I. Galeeva
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| | - Tatyana V. Trifonova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| | - Ayrat R. Khamatgalimov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, 420088 Kazan, Russia;
| | - Richard P. Beckett
- School of Life Sciences, University of KwaZulu-Natal, PBag X01, Scottsville 3209, South Africa;
- “Biomarker” Research Laboratory, Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia
| | - Farida V. Minibayeva
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center, Russian Academy of Sciences, 420111 Kazan, Russia; (A.G.D.); (I.Y.L.); (V.R.K.); (O.P.G.); (E.I.G.); (T.V.T.)
| |
Collapse
|
3
|
Osyczka P, Myśliwa-Kurdziel B. Do the expected heatwaves pose a threat to lichens?: Linkage between a passive decline in water content in thalli and response to heat stress. PLANT, CELL & ENVIRONMENT 2024. [PMID: 38874284 DOI: 10.1111/pce.14999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 05/25/2024] [Accepted: 05/30/2024] [Indexed: 06/15/2024]
Abstract
Being poikilohydric, lichens are inherently exposed to alternating desiccation and hydration cycles. They can exhibit extraordinary resistance to extreme temperatures in a dehydrated state but thermal thresholds for hydrated lichens are lower. The ability of the lichen Cetraria aculeata to recovery after high temperature treatment (40°C, 60°C) at different air humidity levels (relative humidity [RH]: <15%, 25%, 50%, 75%, ≅100%) was examined to find a linkage between passive dehydration of the lichen and its physiological resistance to heat stress. The response to heating was determined by measuring parameters related to photosynthesis and respiration after 2- and 24-h recovery. A higher RH level resulted in a slower decline in relative water content (RWC) in hydrated thalli. In turn, the stress resistance of active thalli depended on the ambient humidity and associated RWC reduction. Elevated temperature had a negative impact on bioenergetic processes, but only an unnatural state of permanent full hydration during heat stress resulted in a lethal effect. Hydrated lichen thalli heated at 40°C and 50% relative humidity (RH) tended to be least susceptible to stress-induced damage. Although atypical climatic conditions may lead lichens to lethal thresholds, the actual likelihood of deadly threat to lichens due to heat events per se is debatable.
Collapse
Affiliation(s)
- Piotr Osyczka
- Institute of Botany, Faculty of Biology, Jagiellonian University, Krakow, Poland
| | - Beata Myśliwa-Kurdziel
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
| |
Collapse
|
4
|
Villagra J, Raggio J, Alors D, Sancho LG. Desiccation Tolerance of Epiphytic Macrolichens in an Evergreen Temperate Rain Forest (Alerce Costero National Park, Chile). PLANTS (BASEL, SWITZERLAND) 2024; 13:1519. [PMID: 38891327 PMCID: PMC11174617 DOI: 10.3390/plants13111519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2024] [Revised: 05/09/2024] [Accepted: 05/17/2024] [Indexed: 06/21/2024]
Abstract
The Valdivian region has a temperate rainy climate with differences in rainfall throughout the year. This heterogeneity results in periods of summer drought that expose the poikilohydric epiphytes to desiccation. With this research, we aim to answer different research questions related to phorophyte preference, response to desiccation, and response to radiation. How does the diversity of macrolichens vary at a local and microclimate scale in three tree species within an evergreen forest? What is the tolerance limit of macrolichens against prolonged desiccation, according to evaluation of the maximum efficiency of PSII (Fv/Fm) and pigment concentration? What is the tolerance limit against a potential increase in radiation? We found that macrolichen communities are determined by tree species, which regulate the suitability of the substrate by modifying the temperature and humidity conditions. In addition, our results show a rapid photosynthetic alteration in temporal exposure to desiccation, measured through Fv/Fm and pigment concentration. Our results showed that the most sensitive lichens to radiation and desiccation are not coincident. We confirm the low tolerance of macrolichen species to high radiation, reflected in the saturation profile obtained for the set studied. The lichen community in the evergreen forest showed high complexity and vulnerability, pointing to the importance of more research.
Collapse
Affiliation(s)
- Johana Villagra
- Departamento de Ciencias Agropecuarias y Acuícolas, Facultad de Recursos Naturales, Campus San Juan, Pablo II, Universidad Católica de Temuco, Temuco 478 0694, Chile
- Departamento de Biología y Químicas, Facultad de Recursos Naturales, Campus San Juan Pablo II, Universidad Católica de Temuco, Temuco 478 0694, Chile
| | - José Raggio
- Departamento de Farmacología, Farmacognosia y Botánica, Facultad de Farmacia, Universidad Complutense de Madrid (UCM), 28040 Madrid, Spain; (J.R.); (L.G.S.)
| | - David Alors
- Departamento de Biología y Químicas, Facultad de Recursos Naturales, Campus San Juan Pablo II, Universidad Católica de Temuco, Temuco 478 0694, Chile
| | - Leopoldo G. Sancho
- Departamento de Farmacología, Farmacognosia y Botánica, Facultad de Farmacia, Universidad Complutense de Madrid (UCM), 28040 Madrid, Spain; (J.R.); (L.G.S.)
| |
Collapse
|
5
|
Chrismas N, Tindall-Jones B, Jenkins H, Harley J, Bird K, Cunliffe M. Metatranscriptomics reveals diversity of symbiotic interaction and mechanisms of carbon exchange in the marine cyanolichen Lichina pygmaea. THE NEW PHYTOLOGIST 2024; 241:2243-2257. [PMID: 37840369 DOI: 10.1111/nph.19320] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 09/21/2023] [Indexed: 10/17/2023]
Abstract
Lichens are exemplar symbioses based upon carbon exchange between photobionts and their mycobiont hosts. Historically considered a two-way relationship, some lichen symbioses have been shown to contain multiple photobiont partners; however, the way in which these photobiont communities react to environmental change is poorly understood. Lichina pygmaea is a marine cyanolichen that inhabits rocky seashores where it is submerged in seawater during every tidal cycle. Recent work has indicated that L. pygmaea has a complex photobiont community including the cyanobionts Rivularia and Pleurocapsa. We performed rRNA-based metabarcoding and mRNA metatranscriptomics of the L. pygmaea holobiont at high and low tide to investigate community response to immersion in seawater. Carbon exchange in L. pygmaea is a dynamic process, influenced by both tidal cycle and the biology of the individual symbiotic components. The mycobiont and two cyanobiont partners exhibit distinct transcriptional responses to seawater hydration. Sugar-based compatible solutes produced by Rivularia and Pleurocapsa in response to seawater are a potential source of carbon to the mycobiont. We propose that extracellular processing of photobiont-derived polysaccharides is a fundamental step in carbon acquisition by L. pygmaea and is analogous to uptake of plant-derived carbon in ectomycorrhizal symbioses.
Collapse
Affiliation(s)
- Nathan Chrismas
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, Devon, PL1 2PB, UK
| | - Beth Tindall-Jones
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, Devon, PL1 2PB, UK
- School of Biological and Marine Sciences, University of Plymouth, Plymouth, PL4 8AA, UK
| | - Helen Jenkins
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, Devon, PL1 2PB, UK
| | - Joanna Harley
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, Devon, PL1 2PB, UK
| | - Kimberley Bird
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, Devon, PL1 2PB, UK
| | - Michael Cunliffe
- Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, Devon, PL1 2PB, UK
- School of Biological and Marine Sciences, University of Plymouth, Plymouth, PL4 8AA, UK
| |
Collapse
|
6
|
Khodadadi R, Sohrabi M, Loppi S, Tahmasebi Birgani Y, Babaei AA, Neisi A, Baboli Z, Dastoorpoor M, Goudarzi G. Atmospheric pollution by potentially toxic elements: measurement and risk assessment using lichen transplants. INTERNATIONAL JOURNAL OF ENVIRONMENTAL HEALTH RESEARCH 2024; 34:1270-1283. [PMID: 36787704 DOI: 10.1080/09603123.2023.2174256] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2022] [Accepted: 01/25/2023] [Indexed: 06/18/2023]
Abstract
The lichen Usnea articulata collected from an unpolluted area was exposed for 6 months at 26 sites for the sample chosenusing a stratified random design, and the content of potentially toxic elements (PTEs) including As, Cd, Cr, Cu, Fe, Hg, Mn, Mo, Ni, Pb, Sn, V, and Zn, was assessed using ICP-MS. The health risk for both adults and children was then calculated using the PTEs concentrations. The results showed that despite the hostile urban conditions, transplanted lichens depicted clear deposition patterns of airborne PTEs, mostly associated with industrial sites, where As and other elements showed remarkably high values. The cumulative hazard index was below the risk threshold, both for adults and children. For the entire population (particularly children) residing in areas surrounding industrial sites, As and Cr appeared to be potentially carcinogenic elements.
Collapse
Affiliation(s)
- Ruhollah Khodadadi
- Department of Environmental Health Engineering, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Mohammad Sohrabi
- The Museum of Iranian Lichens, Iranian Research Organization for Science and Technology, Tehran, Iran
- Biotechnology Department, Iranian Research Organization for Science and Technology, Tehran, Iran
| | - Stefano Loppi
- Department of Life Sciences, University of Siena, Siena, Italy
| | - Yaser Tahmasebi Birgani
- Environmental Technologies Research Center (ETRC), Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Ali Akbar Babaei
- Department of Environmental Health Engineering, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Environmental Technologies Research Center (ETRC), Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Air Pollution and Respiratory Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Abdolkazem Neisi
- Department of Environmental Health Engineering, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Environmental Technologies Research Center (ETRC), Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Air Pollution and Respiratory Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Zeynab Baboli
- Department of Environmental Health Engineering, Behbahan Faculty of Medical Sciences, Behbahan, Iran
| | - Maryam Dastoorpoor
- Air Pollution and Respiratory Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
| | - Gholamreza Goudarzi
- Department of Environmental Health Engineering, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Environmental Technologies Research Center (ETRC), Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Air Pollution and Respiratory Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
- Iranian Scientific Association of Clean Air, Tehran, Iran
| |
Collapse
|
7
|
Gacura MD, Zak DR, Blackwood CB. From individual leaves to forest stands: importance of niche, distance decay, and stochasticity vary by ecosystem type and functional group for fungal community composition. FEMS Microbiol Ecol 2024; 100:fiae016. [PMID: 38373845 PMCID: PMC10913062 DOI: 10.1093/femsec/fiae016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 01/26/2024] [Accepted: 02/16/2024] [Indexed: 02/21/2024] Open
Abstract
Community assembly is influenced by environmental niche processes as well as stochastic processes that can be spatially dependent (e.g. dispersal limitation) or independent (e.g. priority effects). Here, we sampled senesced tree leaves as unit habitats to investigate fungal community assembly at two spatial scales: (i) small neighborhoods of overlapping leaves from differing tree species and (ii) forest stands of differing ecosystem types. Among forest stands, ecosystem type explained the most variation in community composition. Among adjacent leaves within stands, variability in fungal composition was surprisingly high. Leaf type was more important in stands with high soil fertility and dominated by differing tree mycorrhizal types (sugar maple vs. basswood or red oak), whereas distance decay was more important in oak-dominated forest stands with low soil fertility. Abundance of functional groups was explained by environmental factors, but predictors of taxonomic composition within differing functional groups were highly variable. These results suggest that fungal community assembly processes are clearest for functional group abundances and large spatial scales. Understanding fungal community assembly at smaller spatial scales will benefit from further study focusing on differences in drivers for different ecosystems and functional groups, as well as the importance of spatially independent factors such as priority effects.
Collapse
Affiliation(s)
- Matthew D Gacura
- Department of Biological Sciences, Kent State University, 800 E. Summit St., Kent, OH 44242, United States
- Biology Department, Gannon University, 109 University Square, Erie, PA 16541, United States
| | - Donald R Zak
- School for Environment and Sustainability, University of Michigan, 440 Church St., Ann Arbor, MI 48109, United States
| | - Christopher B Blackwood
- Department of Biological Sciences, Kent State University, 800 E. Summit St., Kent, OH 44242, United States
- Department of Plant, Soil, and Microbial Sciences and Department of Plant Biology, Michigan State University, 1066 Bogue St., East Lansing, MI 48842, United States
| |
Collapse
|
8
|
Osyczka P, Kościelniak R, Stanek M. Old-growth forest versus generalist lichens: Sensitivity to prolonged desiccation stress and photosynthesis reactivation rate upon rehydration. Mycologia 2024; 116:31-43. [PMID: 38039398 DOI: 10.1080/00275514.2023.2275460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Accepted: 10/23/2023] [Indexed: 12/03/2023]
Abstract
Most epiphytic lichens demonstrate high specificity to a habitat type, and sensitive hygrophilous species usually find shelter only in close-to-natural forest complexes. Some of them are considered as old-growth forest and/or long ecological continuity indicators. To evaluate general links between the narrow ecological range and physiological traits, two distinct sets of model lichens, i.e., old-growth forest (Cetrelia cetrarioides (Duby) W.L. Culb. & C.F. Culb., Lobaria pulmonaria (L.) Hoffm., Menegazzia terebrata (Hoffm.) A. Massal.), and generalist (Flavoparmelia caperata (L.) Hale, Hypogymnia physodes (L.) Nyl., Parmelia sulcata Taylor) ones, were examined in terms of sensitivity to long-term desiccation stress (1-, 2-, and 3-month) and photosynthesis activation rate upon rehydration. Desiccation tolerance and response rate to rehydration are specific to a given ecological set of lichens rather than to a particular species. Noticeable delayed and prompt recovery of high photosynthetic activity of photosystem II (PSII) characterize these sets, respectively. At the same time, although a decrease in the potential quantum yield of PSII in lichen thalli with a relative water content (RWC) at the level of 25% was observed, the efficiency remained at a very high level for all species, regardless of habitat preferences. Among the examined lichens, the fluorescence emission parameters for F. caperata were the fastest toward equilibrium upon rehydration, both after a shorter and a longer period of desiccation stress. In contrast to generalist lichens, retrieving of photosynthesis after 3-month desiccation failed in old-growth forest lichens. In the long term, prolonged rainless periods and unfavorable water balance in the environment predicted in the future may have a severely limiting effect on hygrophilous lichens during growing season (also in the sense of species associations) and, at the same time, promote the development of generalists.
Collapse
Affiliation(s)
- Piotr Osyczka
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 3, Kraków 30-387, Poland
| | - Robert Kościelniak
- Institute of Botany, Pedagogical University of Krakow, Podchorążych 2, Kraków 30-084, Poland
| | - Małgorzata Stanek
- Laboratory of Ecochemistry and Environmental Engineering, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, Kraków 31-512, Poland
| |
Collapse
|
9
|
Lorenz C, Arena C, Vitale E, Bianchi E, Poggiali G, Alemanno G, Benesperi R, Brucato JR, Garland S, Helbert J, Loppi S, Lorek A, Maturilli A, Papini A, de Vera JP, Baqué M. Resilience of Xanthoria parietina under Mars-like conditions: photosynthesis and oxidative stress response. PLANTA 2023; 259:25. [PMID: 38108922 DOI: 10.1007/s00425-023-04290-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Accepted: 11/13/2023] [Indexed: 12/19/2023]
Abstract
MAIN CONCLUSION Xanthoria parietina survivability in Mars-like conditions was supported by water-lysis efficiency recovery and antioxidant content balancing with ROS production after 30 days of exposure. Xanthoria parietina (L.) Th. Fr. is a widespread lichen showing tolerance against air pollutants and UV-radiation. It has been tested under space-like and Mars-like conditions resulting in high recovery performances. Hereby, we aim to assess the mechanisms at the basis of the thalli resilience against multiple space stress factors. Living thalli of X. parietina were exposed to simulated Martian atmospheric conditions (Dark Mars) and UV radiation (Full Mars). Then, we monitored as vitality indicator the photosynthetic efficiency, assessed by in vivo chlorophyll emission fluorescence measurements (FM; FV/F0). The physiological defense was evaluated by analyzing the thalli antioxidant capacity. The drop of FM and FV/F0 immediately after the exposure indicated a reduction of photosynthesis. After 24 h from exposure, photosynthetic efficiency began to recover suggesting the occurrence of protective mechanisms. Antioxidant concentrations were higher during the exposure, only decreasing after 30 days. The recovery of photosynthetic efficiency in both treatments suggested a strong resilience by the photosynthetic apparatus against combined space stress factors, likely due to the boosted antioxidants at the beginning and their depletion at the end of the exposure. The overall results indicated that the production of antioxidants, along with the occurrence of photoprotection mechanisms, guarantee X. parietina survivability in Mars-like environment.
Collapse
Affiliation(s)
- Christian Lorenz
- Department of Biology, University of Naples Federico II, Via Cinthia, 80126, Naples, Italy
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi, 5, 50125, Florence, Italy
- Department of Biology, University of Florence, Via La Pira 4, 50121, Florence, Italy
| | - Carmen Arena
- Department of Biology, University of Naples Federico II, Via Cinthia, 80126, Naples, Italy.
- NBFC-National Biodiversity Future Center, 90133, Palermo, Italy.
| | - Ermenegilda Vitale
- Department of Biology, University of Naples Federico II, Via Cinthia, 80126, Naples, Italy
| | - Elisabetta Bianchi
- Department of Biology, University of Florence, Via La Pira 4, 50121, Florence, Italy
- NBFC-National Biodiversity Future Center, 90133, Palermo, Italy
| | - Giovanni Poggiali
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi, 5, 50125, Florence, Italy
- LESIA-Observatoire de Paris, Université PSL, CNRS, Sorbonne Université, Université de Paris, 5 Place Jules Janssen, 92190, Meudon, France
| | - Giulia Alemanno
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Renato Benesperi
- Department of Biology, University of Florence, Via La Pira 4, 50121, Florence, Italy
- NBFC-National Biodiversity Future Center, 90133, Palermo, Italy
| | - John Robert Brucato
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi, 5, 50125, Florence, Italy
| | - Stephen Garland
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Jörn Helbert
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Stefano Loppi
- NBFC-National Biodiversity Future Center, 90133, Palermo, Italy
- Department of Life Sciences, University of Siena, Via P. A. Mattioli 4, 53100, Siena, Italy
| | - Andreas Lorek
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Alessandro Maturilli
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Alessio Papini
- Department of Biology, University of Florence, Via La Pira 4, 50121, Florence, Italy
- NBFC-National Biodiversity Future Center, 90133, Palermo, Italy
| | - Jean-Pierre de Vera
- Space Operations and Astronaut Training, Microgravity User Support Center (MUSC), German Aerospace Center (DLR), Linder Höhe, 51147, Cologne, Germany
| | - Mickaël Baqué
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| |
Collapse
|
10
|
Ramírez N, Sigurbjörnsdóttir MA, Monteil C, Berge O, Heiðmarsson S, Jackson RW, Morris C, Vilhelmsson O. Pseudomonas syringae isolated in lichens for the first time: Unveiling Peltigera genus as the exclusive host. Environ Microbiol 2023; 25:3502-3511. [PMID: 37658725 DOI: 10.1111/1462-2920.16490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Accepted: 08/01/2023] [Indexed: 09/03/2023]
Abstract
Pseudomonas syringae is a bacterial complex that is widespread through a range of environments, typically associated with plants where it can be pathogenic, but also found in non-plant environments such as clouds, precipitation, and surface waters. Understanding its distribution within the environment, and the habitats it occupies, is important for examining its evolution and understanding behaviours. After a recent study found P. syringae living among a range of vascular plant species in Iceland, we questioned whether lichens could harbour P. syringae. Sixteen different species of lichens were sampled all over Iceland, but only one lichen genus, Peltigera, was found to consistently harbour P. syringae. Phylogenetic analyses of P. syringae from 10 sampling points where lichen, tracheophyte, and/or moss were simultaneously collected showed significant differences between sampling points, but not between different plants and lichens from the same point. Furthermore, while there were similarities in the P. syringae population in tracheophytes and Peltigera, the densities in Peltigera thalli were lower than in moss and tracheophyte samples. This discovery suggests P. syringae strains can localize and survive in organisms beyond higher plants, and thus reveals opportunities for studying their influence on P. syringae evolution.
Collapse
Affiliation(s)
- Natalia Ramírez
- Department of Natural Resource Sciences, University of Akureyri, Akureyri, Iceland
| | | | - Cecile Monteil
- INRA, UR0407 Pathologie Vegétale, Montfavet Cedex, France
| | - Odile Berge
- INRA, UR0407 Pathologie Vegétale, Montfavet Cedex, France
| | | | - Robert W Jackson
- School of Biosciences and Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK
| | - Cindy Morris
- INRA, UR0407 Pathologie Vegétale, Montfavet Cedex, France
| | - Oddur Vilhelmsson
- Department of Natural Resource Sciences, University of Akureyri, Akureyri, Iceland
| |
Collapse
|
11
|
López-Pozo M, Fernández-Marín B, García-Plazaola J, Seal CE, Ballesteros D. Ageing kinetics of fern chlorophyllous spores during dry storage is determined by its antioxidant potential and likely induced by photosynthetic machinery. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 337:111870. [PMID: 37722506 DOI: 10.1016/j.plantsci.2023.111870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 09/08/2023] [Accepted: 09/14/2023] [Indexed: 09/20/2023]
Abstract
Ageing in dry chlorophyllous propagules is leaded by photooxidation through the photosynthetic machinery, but why species differ in longevity and the ageing mechanisms of when light and oxygen are absent are unknown. We hypothesize that the cellular antioxidant capacity is key for the inter- and intra-specific differences in the ageing process. We have tested this hypothesis in chlorophyllous spores of two ferns. They were subjected to four different storage regimes resulting from light/dark and normoxia/hypoxia combinations. Lipophilic and hydrophilic antioxidants, reactive oxygen species (ROS), and photosynthetic pigments were analysed in parallel to germination and the recovery of Fv/Fm over a storage period of up to 22-months. We show that light and oxygen accelerate the ageing process, but their mechanisms (ROS, increase, antioxidant capacity decrease, loss of efficiency of the photosystem II, pigment degradation) appear the same under all conditions tested. The end of the asymptomatic phase of longevity, when a sudden drop of germination occurs, seems to be determined by a threshold in the depletion of antioxidants. Our results support the hypothesis that ageing kinetics in dry plant propagules is determined by the antioxidant system, but also suggests an active role of the photosynthetic machinery during ageing, even in darkness and hypoxia.
Collapse
Affiliation(s)
- M López-Pozo
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Vizcaya, Spain.
| | - B Fernández-Marín
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Vizcaya, Spain
| | - J García-Plazaola
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Vizcaya, Spain
| | - C E Seal
- Royal Botanic Gardens Kew, Wakehurst, Ardingly, West Sussex, UK
| | - D Ballesteros
- Royal Botanic Gardens Kew, Wakehurst, Ardingly, West Sussex, UK; Department of Botany and Geology, Universitat de Valencia, Burjassot, Spain
| |
Collapse
|
12
|
Arzac MI, Miranda-Apodaca J, Gasulla F, Arce-Guerrero M, Fernández-Marín B, García-Plazaola JI. Acquisition of Desiccation Tolerance Unveiled: Polar Lipid Profiles of Streptophyte Algae Offer Insights. PHYSIOLOGIA PLANTARUM 2023; 175:e14073. [PMID: 38148218 DOI: 10.1111/ppl.14073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2023] [Revised: 10/16/2023] [Accepted: 10/20/2023] [Indexed: 12/28/2023]
Abstract
Terrestrialization by photosynthetic eukaryotes took place in the two branches of green microalgae: Chlorophyta and Charophyta. Within the latter, the paraphyletic streptophytic algae divide into two clades. These are named Klebsormidiophyceae-Chlorokybophyceae-Mesostigmatophyceae (KCM), which is the oldest, and Zygnematophyceae-Coleochaetophyceae-Charophyceae (ZCC), which contains the closest relatives of vascular plants. Terrestrialization required the emergence of adaptations in response to new challenges, such as irradiance, temperature oscillations and water deprivation. In this study, we evaluated lipid composition in species representative of distinct phylogenetic clusters within Charophyta and Chlorophyta. We aim to study whether the inherent thylakoid lipid composition, as well as its adaptability in response to desiccation, were fundamental factors for the evolutionary history of terrestrial plants. The results showed that the lipid composition was similar to that found in flowering land plants, differing only in betaine lipids. Likewise, the largest constitutive pool of oligogalactolipids (OGL) was found only in the fully desiccation-tolerant species Klebsormidium nitens. After desiccation, the content of polar lipids decreased in all species. Conversely, the content of OGL increased, particularly trigalactosyldiacylglycerol and tetragalactosyldiacylglycerol in the ZCC clade. The analysis of the molecular species composition of the newly formed OGL may suggest a different biosynthetic route for the KCM and ZCC clades. We speculate that the appearance of a new OGL synthesis pathway, which eventually arose during the streptophyte evolutionary process, endowed algae with a much more dynamic regulation of thylakoid composition in response to stress, which ultimately contributed to the colonization of terrestrial habitats.
Collapse
Affiliation(s)
- Miren Irati Arzac
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Leioa, Spain
| | - Jon Miranda-Apodaca
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Leioa, Spain
| | | | - María Arce-Guerrero
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Leioa, Spain
| | - Beatriz Fernández-Marín
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Leioa, Spain
- Department of Botany, Ecology and Plant Physiology, University of La Laguna (ULL), La Laguna, Canary Islands, Spain
| | | |
Collapse
|
13
|
Mlambo G, Padayachee T, Nelson DR, Syed K. Genome-Wide Analysis of the Cytochrome P450 Monooxygenases in the Lichenized Fungi of the Class Lecanoromycetes. Microorganisms 2023; 11:2590. [PMID: 37894248 PMCID: PMC10608907 DOI: 10.3390/microorganisms11102590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Revised: 10/01/2023] [Accepted: 10/18/2023] [Indexed: 10/29/2023] Open
Abstract
Lichens are unique organisms that exhibit a permanent symbiosis between fungi and algae or fungi and photosynthetic bacteria. Lichens have been found to produce biotechnologically valuable secondary metabolites. A handful of studies showed that tailoring enzymes such as cytochrome P450 monooxygenases (CYPs/P450s) play a key role in synthesizing these metabolites. Despite the critical role of P450s in the biosynthesis of secondary metabolites, the systematic analysis of P450s in lichens has yet to be reported. This study is aimed to address this research gap. A genome-wide analysis of P450s in five lichens from the fungal class Lecanoromycetes revealed the presence of 434 P450s that are grouped into 178 P450 families and 345 P450 subfamilies. The study indicated that none of the P450 families bloomed, and 15 P450 families were conserved in all five Lecanoromycetes. Lecanoromycetes have more P450s and higher P450 family diversity compared to Pezizomycetes. A total of 73 P450s were found to be part of secondary metabolite gene clusters, indicating their potential involvement in the biosynthesis of secondary metabolites. Annotation of P450s revealed that CYP682BG1 and CYP682BG2 from Cladonia grayi and Pseudevernia furfuracea (physodic acid chemotype) are involved in the synthesis of grayanic acid and physodic acid, CYP65FQ2 from Stereocaulon alpinum is involved in the synthesis of atranorin, and CYP6309A2 from Cladonia uncialis is involved in the synthesis of usnic acid. This study serves as a reference for future annotation of P450s in lichens.
Collapse
Affiliation(s)
- Gugulethu Mlambo
- Department of Biochemistry and Microbiology, Faculty of Science, Agriculture and Engineering, University of Zululand, Vulindlela, KwaDlangezwa 3886, South Africa; (G.M.); (T.P.)
| | - Tiara Padayachee
- Department of Biochemistry and Microbiology, Faculty of Science, Agriculture and Engineering, University of Zululand, Vulindlela, KwaDlangezwa 3886, South Africa; (G.M.); (T.P.)
| | - David R. Nelson
- Department of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, TN 38163, USA
| | - Khajamohiddin Syed
- Department of Biochemistry and Microbiology, Faculty of Science, Agriculture and Engineering, University of Zululand, Vulindlela, KwaDlangezwa 3886, South Africa; (G.M.); (T.P.)
| |
Collapse
|
14
|
Fernández-Pastor I, González-Menéndez V, Martínez Andrade K, Serrano R, Mackenzie TA, Benítez G, Casares-Porcel M, Genilloud O, Reyes F. Xerophytic Lichens from Gypsiferous Outcrops of Arid Areas of Andalusia as a Source of Anti-Phytopathogenic Depsides. J Fungi (Basel) 2023; 9:887. [PMID: 37754995 PMCID: PMC10532656 DOI: 10.3390/jof9090887] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 08/21/2023] [Accepted: 08/24/2023] [Indexed: 09/28/2023] Open
Abstract
In a survey to evaluate the potential of lichens associated with gypsum areas as sources of new antifungal metabolites, six species of lichens were collected in the gypsum outcrops of the Sorbas Desert (Diploschistes ocellatus and Seirophora lacunosa) and the Tabernas Desert (Cladonia foliacea, Acarospora placodiformis, Squamarina lentigera and Xanthoparmelia pokornyi) in southern Spain. Raw lichen acetone extracts were tested against a panel of seven phytopathogenic fungi, including Botrytis cinerea, Colletotrichum acutatum, Fusarium oxysporum f.sp cubense TR4, Fusarium ploriferaum, Magnaporthe grisea, Verticillium dahliae and Zymoseptoria tritici. Active extracts of Cladonia foliacea, Xanthoparmelia pokornyi and Squamarina lentigera were analyzed by HPLC-MS/MS and Molecular Networking to identify possible metabolites responsible for the antifungal activity. A total of ten depside-like metabolites were identified by MS/MS dereplication and NMR experiments, of which one was a new derivative of fumaroprotocetraric acid. The compounds without previously described biological activity were purified and tested against the panel of fungal phytopathogens. Herein, the antifungal activity against fungal phytopathogens of 4'-O-methylpaludosic acid, divaricatic acid and stenosporic acid is reported for the first time. Stenosporic and divaricatic acids displayed a broad antifungal spectrum against seven relevant fungal phytopathogens in a micromolar range, including the extremely resistant fungus F. oxysporum f. sp. cubense Tropical Race 4 (TR4). 4'-O-methylpaludosic acid exhibited specific antifungal activity against the wheat pathogen Z. tritici, with an IC50 of 38.87 µg/mL (87.1 µM) in the absorbance-based assay and 24.88 µg/mL (55.52 µM) in the fluorescence-based assay.
Collapse
Affiliation(s)
- Ignacio Fernández-Pastor
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| | - Victor González-Menéndez
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| | - Kevin Martínez Andrade
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| | - Rachel Serrano
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| | - Thomas A. Mackenzie
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| | - Guillermo Benítez
- Department of Botany, Faculty of Pharmacy, Cartuja Campus, University of Granada, 18071 Granada, Spain; (G.B.); (M.C.-P.)
| | - Manuel Casares-Porcel
- Department of Botany, Faculty of Pharmacy, Cartuja Campus, University of Granada, 18071 Granada, Spain; (G.B.); (M.C.-P.)
| | - Olga Genilloud
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| | - Fernando Reyes
- Fundación MEDINA, Avda. Del Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain; (I.F.-P.); (K.M.A.); (R.S.); (T.A.M.); (O.G.)
| |
Collapse
|
15
|
Morales-Sánchez JÁ, Mark K, Talts E, Rasulov B, Niinemets Ü. Improved monitoring of cryptogam gas-exchange and volatile emissions during desiccation-rehydration cycles with a within-chamber hydration method. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023:111745. [PMID: 37244500 DOI: 10.1016/j.plantsci.2023.111745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Revised: 04/10/2023] [Accepted: 05/21/2023] [Indexed: 05/29/2023]
Abstract
Desiccation-rehydration studies in cryptogams constitute an important tool to understand the relation of key physiological traits with species stress tolerance and environmental adaptability. Real-time monitoring of responses has been limited by the design of commercial or custom measuring cuvettes and difficulties in experimental manipulation. We developed a within-chamber rehydration method that allows to rewater the samples rapidly, without the need to open the chamber and take out the sample for manual rehydration by the investigator. Data is collected in real-time and simultaneously with an infrared gas-analyzer (LICOR-7000), a chlorophyll fluorometer (Maxi Imaging-PAM) and a proton transfer reaction time-of-flight mass-spectrometer (PTR-TOF-MS) for volatile organic compound emissions. The system was tested on four cryptogam species with contrasting ecological distributions. No major errors or kinetics disruptions were found during system testing and measurements. Our within-chamber rehydration method improved accuracy, as measurement periods were not lacking, and repeatability of the protocol by reducing error variance in sample manipulation. This method provides an improved technique to conduct desiccation-rehydration measurements, contributing to the standardization and accuracy of current existing methodologies. A close real-time and simultaneous monitoring of photosynthesis, chlorophyll fluorescence and volatile organic compound emission data, offers a novel perspective in the analysis of the cryptogam stress responses that is yet to be fully explored.
Collapse
Affiliation(s)
- José Ángel Morales-Sánchez
- Chair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Fr. R. Kreutzwaldi 5, Tartu 51006, Estonia.
| | - Kristiina Mark
- Chair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Fr. R. Kreutzwaldi 5, Tartu 51006, Estonia
| | - Eero Talts
- Chair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Fr. R. Kreutzwaldi 5, Tartu 51006, Estonia
| | - Bakhtier Rasulov
- Chair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Fr. R. Kreutzwaldi 5, Tartu 51006, Estonia
| | - Ülo Niinemets
- Chair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Fr. R. Kreutzwaldi 5, Tartu 51006, Estonia; Estonian Academy of Sciences, Kohtu 6, Tallinn 10130, Estonia
| |
Collapse
|
16
|
Hoellrich MR, James DK, Bustos D, Darrouzet-Nardi A, Santiago LS, Pietrasiak N. Biocrust carbon exchange varies with crust type and time on Chihuahuan Desert gypsum soils. Front Microbiol 2023; 14:1128631. [PMID: 37234525 PMCID: PMC10208066 DOI: 10.3389/fmicb.2023.1128631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Accepted: 03/30/2023] [Indexed: 05/28/2023] Open
Abstract
Introduction In dryland systems, biological soil crusts (biocrusts) can occupy large areas of plant interspaces, where they fix carbon following rain. Although distinct biocrust types contain different dominant photoautotrophs, few studies to date have documented carbon exchange over time from various biocrust types. This is especially true for gypsum soils. Our objective was to assess the carbon exchange of biocrust types established at the world's largest gypsum dune field at White Sands National Park. Methods We sampled five different biocrust types from a sand sheet location in three different years and seasons (summer 2020, fall 2021, and winter 2022) for carbon exchange measurements in controlled lab conditions. Biocrusts were rehydrated to full saturation and light incubated for 30 min, 2, 6, 12, 24, and 36 h. Samples were then subject to a 12-point light regime with a LI-6400XT photosynthesis system to determine carbon exchange. Results Biocrust carbon exchange values differed by biocrust type, by incubation time since wetting, and by date of field sampling. Lichens and mosses had higher gross and net carbon fixation rates than dark and light cyanobacterial crusts. High respiration rates were found after 0.5 h and 2 h incubation times as communities recovered from desiccation, leveling off after 6 h incubation. Net carbon fixation of all types increased with longer incubation time, primarily as a result of decreasing respiration, which suggests rapid recovery of biocrust photosynthesis across types. However, net carbon fixation rates varied from year to year, likely as a product of time since the last rain event and environmental conditions preceding collection, with moss crusts being most sensitive to environmental stress at our study sites. Discussion Given the complexity of patterns discovered in our study, it is especially important to consider a multitude of factors when comparing biocrust carbon exchange rates across studies. Understanding the dynamics of biocrust carbon fixation in distinct crust types will enable greater precision of carbon cycling models and improved forecasting of impacts of global climate change on dryland carbon cycling and ecosystem functioning.
Collapse
Affiliation(s)
- Mikaela R. Hoellrich
- Plant and Environmental Sciences, New Mexico State University, Las Cruces, NM, United States
| | - Darren K. James
- USDA-ARS Jornada Experimental Range, New Mexico State University, Las Cruces, NM, United States
| | - David Bustos
- US DOI White Sands National Park, Alamogordo, NM, United States
| | | | - Louis S. Santiago
- Botany and Plant Sciences, University of California, Riverside, Riverside, CA, United States
| | - Nicole Pietrasiak
- Plant and Environmental Sciences, New Mexico State University, Las Cruces, NM, United States
- School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, United States
| |
Collapse
|
17
|
Pichler G, Muggia L, Carniel FC, Grube M, Kranner I. How to build a lichen: from metabolite release to symbiotic interplay. THE NEW PHYTOLOGIST 2023; 238:1362-1378. [PMID: 36710517 PMCID: PMC10952756 DOI: 10.1111/nph.18780] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Accepted: 12/28/2022] [Indexed: 06/18/2023]
Abstract
Exposing their vegetative bodies to the light, lichens are outstanding amongst other fungal symbioses. Not requiring a pre-established host, 'lichenized fungi' build an entirely new structure together with microbial photosynthetic partners that neither can form alone. The signals involved in the transition of a fungus and a compatible photosynthetic partner from a free-living to a symbiotic state culminating in thallus formation, termed 'lichenization', and in the maintenance of the symbiosis, are poorly understood. Here, we synthesise the puzzle pieces of the scarce knowledge available into an updated concept of signalling involved in lichenization, comprising five main stages: (1) the 'pre-contact stage', (2) the 'contact stage', (3) 'envelopment' of algal cells by the fungus, (4) their 'incorporation' into a pre-thallus and (5) 'differentiation' into a complex thallus. Considering the involvement of extracellularly released metabolites in each phase, we propose that compounds such as fungal lectins and algal cyclic peptides elicit early contact between the symbionts-to-be, whereas phytohormone signalling, antioxidant protection and carbon exchange through sugars and sugar alcohols are of continued importance throughout all stages. In the fully formed lichen thallus, secondary lichen metabolites and mineral nutrition are suggested to stabilize the functionalities of the thallus, including the associated microbiota.
Collapse
Affiliation(s)
- Gregor Pichler
- Department of BotanyUniversity of InnsbruckSternwartestraße 156020InnsbruckAustria
| | - Lucia Muggia
- Department of Life SciencesUniversity of TriesteVia L. Giorgieri 1034127TriesteItaly
| | | | - Martin Grube
- Institute of BiologyUniversity of GrazHolteigasse 68010GrazAustria
| | - Ilse Kranner
- Department of BotanyUniversity of InnsbruckSternwartestraße 156020InnsbruckAustria
| |
Collapse
|
18
|
Ren M, Jiang S, Wang Y, Pan X, Pan F, Wei X. Discovery and excavation of lichen bioactive natural products. Front Microbiol 2023; 14:1177123. [PMID: 37138611 PMCID: PMC10149937 DOI: 10.3389/fmicb.2023.1177123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Accepted: 03/24/2023] [Indexed: 05/05/2023] Open
Abstract
Lichen natural products are a tremendous source of new bioactive chemical entities for drug discovery. The ability to survive in harsh conditions can be directly correlated with the production of some unique lichen metabolites. Despite the potential applications, these unique metabolites have been underutilized by pharmaceutical and agrochemical industries due to their slow growth, low biomass availability, and technical challenges involved in their artificial cultivation. At the same time, DNA sequence data have revealed that the number of encoded biosynthetic gene clusters in a lichen is much higher than in natural products, and the majority of them are silent or poorly expressed. To meet these challenges, the one strain many compounds (OSMAC) strategy, as a comprehensive and powerful tool, has been developed to stimulate the activation of silent or cryptic biosynthetic gene clusters and exploit interesting lichen compounds for industrial applications. Furthermore, the development of molecular network techniques, modern bioinformatics, and genetic tools is opening up a new opportunity for the mining, modification, and production of lichen metabolites, rather than merely using traditional separation and purification techniques to obtain small amounts of chemical compounds. Heterologous expressed lichen-derived biosynthetic gene clusters in a cultivatable host offer a promising means for a sustainable supply of specialized metabolites. In this review, we summarized the known lichen bioactive metabolites and highlighted the application of OSMAC, molecular network, and genome mining-based strategies in lichen-forming fungi for the discovery of new cryptic lichen compounds.
Collapse
Affiliation(s)
- Meirong Ren
- Key Laboratory of Biodiversity Conservation in Southwest China, State Forestry Administration, Southwest Forestry University, Kunming, China
| | - Shuhua Jiang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
| | - Yanyan Wang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
| | - Xinhua Pan
- Jiangxi Xiankelai Biotechnology Co., Ltd., Jiujiang, China
| | - Feng Pan
- Jiangxi Xiankelai Biotechnology Co., Ltd., Jiujiang, China
| | - Xinli Wei
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
| |
Collapse
|
19
|
Villa F, Ludwig N, Mazzini S, Scaglioni L, Fuchs AL, Tripet B, Copié V, Stewart PS, Cappitelli F. A desiccated dual-species subaerial biofilm reprograms its metabolism and affects water dynamics in limestone. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 868:161666. [PMID: 36669662 DOI: 10.1016/j.scitotenv.2023.161666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2022] [Revised: 01/10/2023] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
Understanding the impact of sessile communities on underlying materials is of paramount importance in stone conservation. Up until now, the critical role of subaerial biofilms (SABs) whether they are protective or deteriorative remains unclear, especially under desiccation. The interest in desiccated SABs is raised by the prediction of an increase in drought events in the next decades that will affect the Mediterranean regions' rich stone heritage as never before. Thus, the main goal of this research is to study the effects of desiccation on both the biofilms' eco-physiology and its impacts on the lithic substrate. To this end, we used a dual-species model system composed of a phototroph and a chemotroph to simulate biofilm behavior on stone heritage. We found that drought altered the phototroph-chemotroph balance and enriched the biofilm matrix with proteins and DNA. Desiccated SABs underwent a shift in metabolism to fermentation and a decrease in oxidative stress. Additionally, desiccated SABs changed the water-related dynamics (adsorption, evaporation, and wetting properties) in limestone. Water absorption experiments showed that desiccated SABs protected the stone from rapid water uptake, while a thermographic survey indicated a delay in water evaporation. Spilling-drop tests revealed a change in the wettability of the stone-SAB interface, which affected the water transport properties of the stone. Finally, desiccated SABs reduced stone swelling in the presence of water vapor. The biodeteriorative and bioprotective implications of desiccated SABs on the stone were ultimately assessed.
Collapse
Affiliation(s)
- F Villa
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - N Ludwig
- Dipartimento di Fisica Aldo Pontremoli, Università degli Studi di Milano, 20133 Milan, Italy.
| | - S Mazzini
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - L Scaglioni
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - A L Fuchs
- Department of Chemistry & Biochemistry, Montana State University, Bozeman, USA
| | - B Tripet
- Department of Chemistry & Biochemistry, Montana State University, Bozeman, USA.
| | - V Copié
- Department of Chemistry & Biochemistry, Montana State University, Bozeman, USA.
| | - P S Stewart
- Center for Biofilm Engineering, Montana State University, Bozeman 59717, USA.
| | - F Cappitelli
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| |
Collapse
|
20
|
Lorenz C, Bianchi E, Poggiali G, Alemanno G, Benesperi R, Brucato JR, Garland S, Helbert J, Loppi S, Lorek A, Maturilli A, Papini A, de Vera JP, Baqué M. Survivability of the lichen Xanthoria parietina in simulated Martian environmental conditions. Sci Rep 2023; 13:4893. [PMID: 36966209 PMCID: PMC10039903 DOI: 10.1038/s41598-023-32008-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 03/21/2023] [Indexed: 03/27/2023] Open
Abstract
Xanthoria parietina (L.) Th. Fr. is a widely spread foliose lichen showing high tolerance against UV-radiation thanks to parietin, a secondary lichen substance. We exposed samples of X. parietina under simulated Martian conditions for 30 days to explore its survivability. The lichen's vitality was monitored via chlorophyll a fluorescence that gives an indication for active light reaction of photosynthesis, performing in situ and after-treatment analyses. Raman spectroscopy and TEM were used to evaluate carotenoid preservation and possible variations in the photobiont's ultrastructure respectively. Significant differences in the photo-efficiency between UV irradiated samples and dark-kept samples were observed. Fluorescence values correlated with temperature and humidity day-night cycles. The photo-efficiency recovery showed that UV irradiation caused significant effects on the photosynthetic light reaction. Raman spectroscopy showed that the carotenoid signal from UV exposed samples decreased significantly after the exposure. TEM observations confirmed that UV exposed samples were the most affected by the treatment, showing chloroplastidial disorganization in photobionts' cells. Overall, X. parietina was able to survive the simulated Mars conditions, and for this reason it may be considered as a candidate for space long-term space exposure and evaluations of the parietin photodegradability.
Collapse
Affiliation(s)
- Christian Lorenz
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - Elisabetta Bianchi
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - Giovanni Poggiali
- LESIA-Observatoire de Paris, CNRS, Université PSL, Sorbonne Université, Université de Paris, 5 Place Jules Janssen, 92190, Meudon, France
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi 5, 50125, Florence, Italy
| | - Giulia Alemanno
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Renato Benesperi
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - John Robert Brucato
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi 5, 50125, Florence, Italy.
| | - Stephen Garland
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Jörn Helbert
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Stefano Loppi
- Department of Environmental Sciences, University of Siena, Via P. A. Mattioli 4, 53100, Siena, Italy
| | - Andreas Lorek
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Alessandro Maturilli
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Alessio Papini
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - Jean-Pierre de Vera
- Microgravity User Support Center (MUSC), Space Operations and Astronaut Training, German Aerospace Center (DLR), Linder Höhe, 51147, Cologne, Germany
| | - Mickaël Baqué
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| |
Collapse
|
21
|
Almer J, Resl P, Gudmundsson H, Warshan D, Andrésson ÓS, Werth S. Symbiont-specific responses to environmental cues in a threesome lichen symbiosis. Mol Ecol 2023; 32:1045-1061. [PMID: 36478478 DOI: 10.1111/mec.16814] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 12/01/2022] [Accepted: 12/05/2022] [Indexed: 12/12/2022]
Abstract
Photosymbiodemes are a special case of lichen symbiosis where one lichenized fungus engages in symbiosis with two different photosynthetic partners, a cyanobacterium and a green alga, to develop two distinctly looking photomorphs. We compared gene expression of thallus sectors of the photosymbiodeme-forming lichen Peltigera britannica containing cyanobacterial photobionts with thallus sectors with both green algal and cyanobacterial photobionts and investigated differential gene expression at different temperatures representing mild and putatively stressful conditions. First, we quantified photobiont-mediated differences in fungal gene expression. Second, because of known ecological differences between photomorphs, we investigated symbiont-specific responses in gene expression to temperature increases. Photobiont-mediated differences in fungal gene expression could be identified, with upregulation of distinct biological processes in the different morphs, showing that interaction with specific symbiosis partners profoundly impacts fungal gene expression. Furthermore, high temperatures expectedly led to an upregulation of genes involved in heat shock responses in all organisms in whole transcriptome data and to an increased expression of genes involved in photosynthesis in both photobiont types at 15 and 25°C. The fungus and the cyanobacteria exhibited thermal stress responses already at 15°C, the green algae mainly at 25°C, demonstrating symbiont-specific responses to environmental cues and symbiont-specific ecological optima.
Collapse
Affiliation(s)
- Jasmin Almer
- Systematics, Biodiversity and Evolution of Plants, LMU Munich, Munich, Germany.,Institute of Biology, University of Graz, Graz, Austria
| | - Philipp Resl
- Systematics, Biodiversity and Evolution of Plants, LMU Munich, Munich, Germany.,Institute of Biology, University of Graz, Graz, Austria
| | - Hörður Gudmundsson
- Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland
| | - Denis Warshan
- Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland
| | - Ólafur S Andrésson
- Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland
| | - Silke Werth
- Systematics, Biodiversity and Evolution of Plants, LMU Munich, Munich, Germany
| |
Collapse
|
22
|
Rola K, Majewska E, Chowaniec K. Interaction effect of fungicide and chitosan on non-target lichenized fungi. CHEMOSPHERE 2023; 316:137772. [PMID: 36623603 DOI: 10.1016/j.chemosphere.2023.137772] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 12/14/2022] [Accepted: 01/04/2023] [Indexed: 06/17/2023]
Abstract
Excessive use of plant growth stimulants and pesticides is currently a considerable problem, especially in agriculture, horticulture, and arboriculture. Understanding the impacts of these compounds and their combinations on non-target organisms is crucial to minimize unintended consequences, while maintaining their use in plant protection. The aim of this study was to test how long-term spraying with different solutions of natural biostimulator chitosan, synthetic fungicide Switch 62.5 WG, and their combinations affects the physiology of epiphytic lichen Xanthoria parietina naturally occurring in fruit orchards and farmlands. We showed that fungicides composed of fludioxionil and cypronidil, as well as the combined use of such fungicides together with chitosan, can cause the considerable impairment of lichen physiology, and these disturbances relate to both algal and fungal partners of the symbiotic association. This negative effect was especially visible in the loss of cell membrane integrity, the high level of membrane lipid peroxidation, and changes in chlorophyll fluorescence parameters on the last day of the experiment. The combined use of these agents also leads to clear disturbances in the functioning of the mitochondrial respiratory chain, which was manifested by increased NADH dehydrogenase activity, while the use of these compounds separately led to a decrease in the activity of this enzyme. We concluded that the regular use of these agents in fruit tree cultivation may cause serious ecological consequences for epiphytic lichen communities as a result of the death of lichen thalli. This study suggests that the impact of some plant protection agents, both individually and in combinations, merits further attention in terms of their impact on non-target fungi.
Collapse
Affiliation(s)
- Kaja Rola
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 3, 30-387 Kraków, Poland
| | - Emilia Majewska
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 3, 30-387 Kraków, Poland
| | - Karolina Chowaniec
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 3, 30-387 Kraków, Poland.
| |
Collapse
|
23
|
Bokhorst S, Bjerke JW, Phoenix GK, Jaakola L, Maehre HK, Tømmervik H. Sub-arctic mosses and lichens show idiosyncratic responses to combinations of winter heatwaves, freezing and nitrogen deposition. PHYSIOLOGIA PLANTARUM 2023; 175:e13882. [PMID: 36840682 DOI: 10.1111/ppl.13882] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Revised: 02/13/2023] [Accepted: 02/20/2023] [Indexed: 06/18/2023]
Abstract
Arctic ecosystems are increasingly exposed to extreme climatic events throughout the year, which can affect species performance. Cryptogams (bryophytes and lichens) provide important ecosystem services in polar ecosystems but may be physiologically affected or killed by extreme events. Through field and laboratory manipulations, we compared physiological responses of seven dominant sub-Arctic cryptogams (three bryophytes, four lichens) to single events and factorial combinations of mid-winter heatwave (6°C for 7 days), re-freezing, snow removal and summer nitrogen addition. We aimed to identify which mosses and lichens are vulnerable to these abiotic extremes and if combinations would exacerbate physiological responses. Combinations of extremes resulted in stronger species responses but included idiosyncratic species-specific responses. Species that remained dormant during winter (March), irrespective of extremes, showed little physiological response during summer (August). However, winter physiological activity, and response to winter extremes, was not consistently associated with summer physiological impacts. Winter extremes affect cryptogam physiology, but summer responses appear mild, and lichens affect the photobiont more than the mycobiont. Accounting for Arctic cryptogam response to multiple climatic extremes in ecosystem functioning and modelling will require a better understanding of their winter eco-physiology and repair capabilities.
Collapse
Affiliation(s)
- Stef Bokhorst
- Norwegian Institute for Nature Research (NINA), FRAM - High North Research Centre for Climate and the Environment, Tromsø, Norway
- Department of Ecological Science, VU University Amsterdam, Amsterdam, The Netherlands
| | - Jarle W Bjerke
- Norwegian Institute for Nature Research (NINA), FRAM - High North Research Centre for Climate and the Environment, Tromsø, Norway
| | - Gareth K Phoenix
- Plants Photosynthesis and Soil, School of Biosciences, The University of Sheffield, Sheffield, UK
| | - Laura Jaakola
- Climate Laboratory Holt, Department of Arctic and Marine Biology, UIT The Arctic University of Norway, Tromsø, Norway
- Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | - Hanne K Maehre
- Norwegian College of Fishery Science, Faculty of Biosciences, Fisheries and Economics, UIT The Arctic University of Norway, Tromsø, Norway
| | - Hans Tømmervik
- Norwegian Institute for Nature Research (NINA), FRAM - High North Research Centre for Climate and the Environment, Tromsø, Norway
| |
Collapse
|
24
|
Stanton DE, Ormond A, Koch NM, Colesie C. Lichen ecophysiology in a changing climate. AMERICAN JOURNAL OF BOTANY 2023; 110:e16131. [PMID: 36795943 DOI: 10.1002/ajb2.16131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Revised: 12/16/2022] [Accepted: 12/20/2022] [Indexed: 06/18/2023]
Abstract
Lichens are one of the most iconic and ubiquitous symbioses known, widely valued as indicators of environmental quality and, more recently, climate change. Our understanding of lichen responses to climate has greatly expanded in recent decades, but some biases and constraints have shaped our present knowledge. In this review we focus on lichen ecophysiology as a key to predicting responses to present and future climates, highlighting recent advances and remaining challenges. Lichen ecophysiology is best understood through complementary whole-thallus and within-thallus scales. Water content and form (vapor or liquid) are central to whole-thallus perspectives, making vapor pressure differential (VPD) a particularly informative environmental driver. Responses to water content are further modulated by photobiont physiology and whole-thallus phenotype, providing clear links to a functional trait framework. However, this thallus-level perspective is incomplete without also considering within-thallus dynamics, such as changing proportions or even identities of symbionts in response to climate, nutrients, and other stressors. These changes provide pathways for acclimation, but their understanding is currently limited by large gaps in our understanding of carbon allocation and symbiont turnover in lichens. Lastly, the study of lichen physiology has mainly prioritized larger lichens at high latitudes, producing valuable insights but underrepresenting the range of lichenized lineages and ecologies. Key areas for future work include improving geographic and phylogenetic coverage, greater emphasis on VPD as a climatic factor, advances in the study of carbon allocation and symbiont turnover, and the incorporation of physiological theory and functional traits in our predictive models.
Collapse
Affiliation(s)
- Daniel E Stanton
- Department of Ecology, Evolution and Behavior, University of Minnesota, 140 Gortner Laboratory, 1479 Gortner Avenue, Saint Paul, MN, 55108, USA
| | - Amaris Ormond
- Global Change Institute, School of GeoSciences, University of Edinburgh, Crew Building, Alexander Crum Brown Road, Edinburgh, EH3 9FF, UK
| | - Natalia M Koch
- Department of Ecology, Evolution and Behavior, University of Minnesota, 140 Gortner Laboratory, 1479 Gortner Avenue, Saint Paul, MN, 55108, USA
| | - Claudia Colesie
- Global Change Institute, School of GeoSciences, University of Edinburgh, Crew Building, Alexander Crum Brown Road, Edinburgh, EH3 9FF, UK
| |
Collapse
|
25
|
Rola K, Latkowska E, Ogar W, Osyczka P. Towards understanding the effect of heavy metals on mycobiont physiological condition in a widespread metal-tolerant lichen Cladonia rei. CHEMOSPHERE 2022; 308:136365. [PMID: 36087724 DOI: 10.1016/j.chemosphere.2022.136365] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 09/02/2022] [Accepted: 09/04/2022] [Indexed: 06/15/2023]
Abstract
Heavy metals present in the environment can cause a variety of injury symptoms in various organisms including lichens. Most studies examined metal-induced stress under controlled laboratory conditions, and little is known about actual response of lichens in their natural habitat. This study aims to recognize the effect of heavy metal accumulation (total and intracellular) on lichen physiological and biochemical parameters specifically related to the functioning of fungal component. Cladonia rei was used as a model species due to its common occurrence both in unpolluted and extremely polluted sites. We observed a decline in the fungal metabolism which was expressed by a decrease in ergosterol content and an increase in cell membrane damage as a result of increased Zn, Cd, Cu and Ni accumulation. Additionally, the results indicated that increased accumulation of xenobiotics (Pb and As) caused reduction of glutathione (GSH) concentrations and increased membrane lipid peroxidation. Therefore, we conclude that GSH does not provide high oxidative stress protection in C. rei which is somewhat against its insensitivity to pollution. The reduced pool of GSH could be explained by its oxidation to glutathione disulphide induced by heavy metal stress or its use for phytochelatin (PC) synthesis. The content of secondary metabolites was not related to heavy metal accumulation and remained at a relatively stable level. This indicates that the decline in the physiological condition did not weaken the mycobiont of C. rei enough to inhibit the synthesis of secondary metabolites and their precursors were supplied at a sufficient level. Thus, the potential function of main secondary metabolites as extracellular metal immobilizers and antioxidants is still possible even in individuals growing at extremely polluted sites. Despite the evident heavy metal stress, C. rei copes well and spreads easily through extremely polluted environments, which underlines its unique pioneering abilities in highly disturbed sites.
Collapse
Affiliation(s)
- Kaja Rola
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 3, 30-387, Kraków, Poland.
| | - Ewa Latkowska
- Laboratory of Metabolomics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland
| | - Wiktoria Ogar
- Laboratory of Metabolomics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland
| | - Piotr Osyczka
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 3, 30-387, Kraków, Poland
| |
Collapse
|
26
|
Adenubi OT, Famuyide IM, McGaw LJ, Eloff JN. Lichens: An update on their ethnopharmacological uses and potential as sources of drug leads. JOURNAL OF ETHNOPHARMACOLOGY 2022; 298:115657. [PMID: 36007717 DOI: 10.1016/j.jep.2022.115657] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Revised: 08/11/2022] [Accepted: 08/16/2022] [Indexed: 06/15/2023]
Abstract
ETHNOPHARMACOLOGICAL RELEVANCE Lichens, a unique symbiotic association between an alga/cyanobacterium and a fungus, produce secondary metabolites that are a promising source of novel drug leads. The beauty and importance of lichens have not been adequately explored despite their manifold biological activities such as anticancer, antimicrobial, antioxidant, anti-inflammatory, analgesic, antipyretic and antiparasitic. AIM OF THE STUDY The present review collates and discusses the available knowledge on secondary metabolites and biological activities of lichens (in vitro and in vivo). MATERIALS AND METHODS Using relevant keywords (lichens, secondary metabolites, bioactivity, pharmacological activities), five electronic databases, namely ScienceDirect, PubMed, Google Scholar, Scopus and Recent Literature on Lichens, were searched for past and current scientific contributions up until May 2022. Literature focusing broadly on the bioactivity of lichens including their secondary metabolites were identified and summarized. RESULTS A total of 50 review articles and 189 research articles were searched. Information related to antioxidant, antimicrobial, anti-inflammatory, anticancer and insecticidal activities of 90 lichen species (from 13 families) and 12 isolated metabolites are reported. Over 90% of the studies comprised in vitro investigations, such as bioassays evaluating radical scavenging properties, lipid peroxidation inhibition and reducing power, cytotoxicity and antimicrobial bioassays of lichen species and constituents. In vivo studies were scarce and available only in fish and rats. Most of the studies were done by research groups in Brazil, France, Serbia, India and Turkey. There were relatively few reports from Asia and Africa despite the ubiquitous nature of lichens and the high occurrence in these continents. CONCLUSION Secondary metabolites from lichens are worthy of further investigation in terms of their potential therapeutic applicability, including better understanding of their mechanism(s) of action. This would be of great importance in the search for novel drugs.
Collapse
Affiliation(s)
- Olubukola Tolulope Adenubi
- Department of Veterinary Pharmacology and Toxicology, College of Veterinary Medicine, Federal University of Agriculture, Abeokuta, Ogun State, Nigeria.
| | - Ibukun Michael Famuyide
- Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Sciences, University of Pretoria, Onderstepoort, 0110, South Africa.
| | - Lyndy Joy McGaw
- Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Sciences, University of Pretoria, Onderstepoort, 0110, South Africa.
| | - Jacobus Nicolaas Eloff
- Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Sciences, University of Pretoria, Onderstepoort, 0110, South Africa.
| |
Collapse
|
27
|
González-Montelongo C, Pérez-Vargas I. Together Apart: Evaluating Lichen-Phorophyte Specificity in the Canarian Laurel Forest. J Fungi (Basel) 2022; 8:jof8101031. [PMID: 36294596 PMCID: PMC9605454 DOI: 10.3390/jof8101031] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Revised: 09/13/2022] [Accepted: 09/20/2022] [Indexed: 11/16/2022] Open
Abstract
The effects of host tree identity on epiphyte lichen communities are a controversial issue, as the results obtained in different forest environments studied are not consistent. We investigated the host preferences for lichens in the laurel forest of Macaronesia. For this purpose, we analyzed the lichen communities growing on the four most common trees (Erica canariensis Rivas-Mart., M. Osorio and Wildpret, Morella faya (Aiton) Wilbur, Laurus novoca-nariensis Rivas-Mart., Lousa, Fern. Prieto, E. Días, J.C. Costa and C. Aguiar, and Ilex canariensis Poir. in Lamarck) in the laurel forest of the Canary Islands. The diversity, richness, and lichen composition showed a repetitive and common pattern with the functional traits studied. Although the existence of specificity with respect to the phorophyte species was not demonstrated, there was a clear affinity of the epiphytic lichens to the physico-chemical features of the bark (texture and pH), canopy architecture, foliar characteristics, etc. Our results highlight the importance of the natural diversity of tree species in the laurel forest. Due to the diversity and uniqueness of the lichen species that support each of the phorophytes, this fact should be taken into account in landscape protection and restoration actions, especially in those islands where the forest is highly fragmented.
Collapse
|
28
|
Beilinson Y, Rassabina A, Lunev I, Faizullin D, Greenbaum A, Salnikov V, Zuev Y, Minibayeva F, Feldman Y. The dielectric response of hydrated water as a structural signature of nanoconfined lichen melanins. Phys Chem Chem Phys 2022; 24:22624-22633. [PMID: 36102934 DOI: 10.1039/d2cp01383e] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Lichens are unique symbiotic organisms from a mutually beneficial alliance of fungi and algae/cyanobacteria that successfully survive extreme temperatures and drought conditions. Most probably such extraordinary vitality of lichens is underlain by melanins, one of the main structural and chemical lichen components, and their mutual relationship with residual water. In this paper, we propose mechanisms, which allow lichens to store up the extra water in their structure. Melanins that are constituents of the cortical lichen layer and presumably contribute to unique water-lichen interactions are chosen for physical experiments in a wide temperature domain. Two melanin pigments extracted from different lichens are studied here - eumelanin from Lobaria pulmonaria and allomelanin from Cetraria islandica. To investigate the inner melanin structure and water-melanin interactions, FTIR and BDS techniques are applied. The BDS technique was used in a wide temperature region of 123-293 K for melanins with various hydration levels. The relaxation processes related to the confinement of supercooled water - in melanins are observed and discussed in details. At medium and high hydration levels, the relaxation process in two melanins of different chemical compositions and supramolecular structures exhibits a well-known crossover that was already observed in many types of confinements. The analysis of FTIR and BDS results helps to clarify the lichen-water interaction processes.
Collapse
Affiliation(s)
- Yael Beilinson
- Department of Applied Physics, Soft Condensed Matter Laboratory, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel.
| | - Anna Rassabina
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Ivan Lunev
- Kazan Federal University, Institute of Physics, Kremlevskaya str.18, Kazan, 420008, Russian Federation
| | - Dzhigangir Faizullin
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Anna Greenbaum
- Department of Applied Physics, Soft Condensed Matter Laboratory, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel. .,Racah Institute of Physics, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel
| | - Vadim Salnikov
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Yuriy Zuev
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Farida Minibayeva
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Yuri Feldman
- Department of Applied Physics, Soft Condensed Matter Laboratory, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel.
| |
Collapse
|
29
|
Snelders NC, Rovenich H, Thomma BPHJ. Microbiota manipulation through the secretion of effector proteins is fundamental to the wealth of lifestyles in the fungal kingdom. FEMS Microbiol Rev 2022; 46:fuac022. [PMID: 35604874 PMCID: PMC9438471 DOI: 10.1093/femsre/fuac022] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 05/19/2022] [Indexed: 11/13/2022] Open
Abstract
Fungi are well-known decomposers of organic matter that thrive in virtually any environment on Earth where they encounter wealths of other microbes. Some fungi evolved symbiotic lifestyles, including pathogens and mutualists, that have mostly been studied in binary interactions with their hosts. However, we now appreciate that such interactions are greatly influenced by the ecological context in which they take place. While establishing their symbioses, fungi not only interact with their hosts but also with the host-associated microbiota. Thus, they target the host and its associated microbiota as a single holobiont. Recent studies have shown that fungal pathogens manipulate the host microbiota by means of secreted effector proteins with selective antimicrobial activity to stimulate disease development. In this review, we discuss the ecological contexts in which such effector-mediated microbiota manipulation is relevant for the fungal lifestyle and argue that this is not only relevant for pathogens of plants and animals but also beneficial in virtually any niche where fungi occur. Moreover, we reason that effector-mediated microbiota manipulation likely evolved already in fungal ancestors that encountered microbial competition long before symbiosis with land plants and mammalian animals evolved. Thus, we claim that effector-mediated microbiota manipulation is fundamental to fungal biology.
Collapse
Affiliation(s)
- Nick C Snelders
- Institute for Plant Sciences, University of Cologne, D-50674 Cologne, Germany
- Theoretical Biology & Bioinformatics Group, Department of Biology, Utrecht University, 3584 CH Utrecht, The Netherlands
| | - Hanna Rovenich
- Institute for Plant Sciences, University of Cologne, D-50674 Cologne, Germany
| | - Bart P H J Thomma
- Institute for Plant Sciences, University of Cologne, D-50674 Cologne, Germany
- Cluster of Excellence on Plant Sciences, Institute for Plant Sciences, University of Cologne, D-50674 Cologne, Germany
| |
Collapse
|
30
|
Puginier C, Keller J, Delaux PM. Plant-microbe interactions that have impacted plant terrestrializations. PLANT PHYSIOLOGY 2022; 190:72-84. [PMID: 35642902 PMCID: PMC9434271 DOI: 10.1093/plphys/kiac258] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Accepted: 05/09/2022] [Indexed: 05/30/2023]
Abstract
Plants display a tremendous diversity of developmental and physiological features, resulting from gains and losses of functional innovations across the plant phylogeny. Among those, the most impactful have been undoubtedly the ones that allowed plant terrestrializations, the transitions from an aquatic to a terrestrial environment. Although the embryophyte terrestrialization has been particularly scrutinized, others occurred across the plant phylogeny with the involvement of mutualistic symbioses as a common theme. Here, we review the current pieces of evidence supporting that the repeated colonization of land by plants has been facilitated by interactions with mutualistic symbionts. In that context, we detail two of these mutualistic symbioses: the arbuscular mycorrhizal symbiosis in embryophytes and the lichen symbiosis in chlorophyte algae. We suggest that associations with bacteria should be revisited in that context, and we propose that overlooked symbioses might have facilitated the emergence of other land plant clades.
Collapse
Affiliation(s)
- Camille Puginier
- Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP Toulouse, Castanet-Tolosan, 31326, France
| | - Jean Keller
- Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP Toulouse, Castanet-Tolosan, 31326, France
| | - Pierre-Marc Delaux
- Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, UPS, INP Toulouse, Castanet-Tolosan, 31326, France
| |
Collapse
|
31
|
A comparative genomic analysis of lichen-forming fungi reveals new insights into fungal lifestyles. Sci Rep 2022; 12:10724. [PMID: 35750715 PMCID: PMC9232553 DOI: 10.1038/s41598-022-14340-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 06/06/2022] [Indexed: 11/18/2022] Open
Abstract
Lichen-forming fungi are mutualistic symbionts of green algae or cyanobacteria. We report the comparative analysis of six genomes of lichen-forming fungi in classes Eurotiomycetes and Lecanoromycetes to identify genomic information related to their symbiotic lifestyle. The lichen-forming fungi exhibited genome reduction via the loss of dispensable genes encoding plant-cell-wall-degrading enzymes, sugar transporters, and transcription factors. The loss of these genes reflects the symbiotic biology of lichens, such as the absence of pectin in the algal cell wall and obtaining specific sugars from photosynthetic partners. The lichens also gained many lineage- and species-specific genes, including those encoding small secreted proteins. These genes are primarily induced during the early stage of lichen symbiosis, indicating their significant roles in the establishment of lichen symbiosis.Our findings provide comprehensive genomic information for six lichen-forming fungi and novel insights into lichen biology and the evolution of symbiosis.
Collapse
|
32
|
Di Nuzzo L, Benesperi R, Nascimbene J, Papini A, Malaspina P, Incerti G, Giordani P. Little time left. Microrefuges may fail in mitigating the effects of climate change on epiphytic lichens. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 825:153943. [PMID: 35189219 DOI: 10.1016/j.scitotenv.2022.153943] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 01/31/2022] [Accepted: 02/13/2022] [Indexed: 06/14/2023]
Abstract
Climate change is already causing considerable reductions in biodiversity in all terrestrial ecosystems. These consequences are expected to be exacerbated in biomes that are particularly exposed to change, such as those in the Mediterranean, and in certain groups of more sensitive organisms, such as epiphytic lichens. These poikylohydric organisms find suitable light and water conditions on trunks under the tree canopy. Despite their small size, epiphytic communities contribute significantly to the functionality of forest ecosystems. In this work, we surveyed epiphytic lichen communities in a Mediterranean area (Sardinia, Italy) and hypothesized that 1) the effect of microclimate on lichens at tree scale is mediated by the functional traits of these organisms and that 2) micro-refuge trees with certain morphological characteristics can mitigate the negative effects of future climate change. Results confirm the first hypothesis, while the second is only partially supported, suggesting that the capability of specific trees to host specific conditions may not be sufficient to maintain the diversity and ecosystem functionality of lichen communities in the Mediterranean.
Collapse
Affiliation(s)
- Luca Di Nuzzo
- Department of Biology, University of Florence, Via La Pira 4, 50121 Florence, Italy
| | - Renato Benesperi
- Department of Biology, University of Florence, Via La Pira 4, 50121 Florence, Italy.
| | - Juri Nascimbene
- BIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum - University of Bologna, Via Irnerio 42, 40126 Bologna, Italy
| | - Alessio Papini
- Department of Biology, University of Florence, Via La Pira 4, 50121 Florence, Italy
| | | | - Guido Incerti
- Department of Agri-Food, Animal and Environmental Sciences, University of Udine, 33100 Udine, Italy
| | | |
Collapse
|
33
|
Rosli NS, Zulkifly S. Application of Index of Atmospheric Purity (IAP) along elevation gradients in Gunung Jerai, Kedah, Malaysia. ENVIRONMENTAL MONITORING AND ASSESSMENT 2022; 194:496. [PMID: 35691975 DOI: 10.1007/s10661-022-10108-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 05/15/2022] [Indexed: 06/15/2023]
Abstract
The utilisation of biological organisms, especially lichens in the environmental biomonitoring approach, has been proven to be an effective and low-cost technique suitable for developing countries like Malaysia. Index of Atmospheric Purity (IAP) tracked compositional changes in lichen communities which correlate with changes in levels of atmospheric pollution. Gunung Jerai was formed during the Cambrian Period; thus, it is a biodiversity hotspot ideal for a diverse range of lichens. In the present work, a total of 44 corticolous lichen species were sampled and identified to evaluate the pollution status of Gunung Jerai using IAP, starting from 80 to 1200 m with 300 m intervals. The samples were collected within 10 × 50 cm sampling grids attached to 60 trees, bringing a total of 120 000 cm2 of the sampling area. The air quality of the sampling area was determined by IAP score, a low score indicated by high levels of pollution. Results showed that the lowest IAP score was recorded at 300 m; meanwhile, the highest IAP score was recorded at 900 m elevation. Elevational gradient and pollution have a significant effect on the IAP score of Gunung Jerai. On average, Gunung Jerai is indicated as having a low pollution status. However, several elevations of the rainforest showed high and moderate pollution status. The IAP method is best to assess environmental pollution and provide quicker results than chemical monitoring methods. Further research could be done to evaluate the other sampling sites adjacent to other areas of Gunung Jerai.
Collapse
Affiliation(s)
- Nur Syuhada Rosli
- Department of Biology, Faculty of Science, Universiti Putra Malaysia, 43400, Serdang Selangor, Malaysia
| | - Shahrizim Zulkifly
- Department of Biology, Faculty of Science, Universiti Putra Malaysia, 43400, Serdang Selangor, Malaysia.
| |
Collapse
|
34
|
Kranner I, Pichler G, Grube M. The lichen market place. THE NEW PHYTOLOGIST 2022; 234:1541-1543. [PMID: 35478327 PMCID: PMC9321073 DOI: 10.1111/nph.18130] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Accepted: 03/30/2022] [Indexed: 06/14/2023]
Abstract
This article is a Commentary on Spribille et al. (2022), 234: 1566–1582.
Collapse
Affiliation(s)
- Ilse Kranner
- Department of BotanyUniversity of InnsbruckSternwartestraße 156020InnsbruckAustria
| | - Gregor Pichler
- Department of BotanyUniversity of InnsbruckSternwartestraße 156020InnsbruckAustria
| | - Martin Grube
- Institute of BiologyUniversity of GrazHolteigasse 68010GrazAustria
| |
Collapse
|
35
|
Spribille T, Resl P, Stanton DE, Tagirdzhanova G. Evolutionary biology of lichen symbioses. THE NEW PHYTOLOGIST 2022; 234:1566-1582. [PMID: 35302240 DOI: 10.1111/nph.18048] [Citation(s) in RCA: 36] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Accepted: 12/21/2021] [Indexed: 05/28/2023]
Abstract
Lichens are the symbiotic outcomes of open, interspecies relationships, central to which are a fungus and a phototroph, typically an alga and/or cyanobacterium. The evolutionary processes that led to the global success of lichens are poorly understood. In this review, we explore the goods and services exchange between fungus and phototroph and how this propelled the success of both symbiont and symbiosis. Lichen fungal symbionts count among the only filamentous fungi that expose most of their mycelium to an aerial environment. Phototrophs export carbohydrates to the fungus, which converts them to specific polyols. Experimental evidence suggests that polyols are not only growth and respiratory substrates but also play a role in anhydrobiosis, the capacity to survive desiccation. We propose that this dual functionality is pivotal to the evolution of fungal symbionts, enabling persistence in environments otherwise hostile to fungi while simultaneously imposing costs on growth. Phototrophs, in turn, benefit from fungal protection from herbivory and light stress, while appearing to exert leverage over fungal sex and morphogenesis. Combined with the recently recognized habit of symbionts to occur in multiple symbioses, this creates the conditions for a multiplayer marketplace of rewards and penalties that could drive symbiont selection and lichen diversification.
Collapse
Affiliation(s)
- Toby Spribille
- Department of Biological Sciences CW405, University of Alberta, Edmonton, AB, T6G 2R3, Canada
| | - Philipp Resl
- Institute of Biology, University of Graz, Universitätsplatz 3, Graz, 8010, Austria
| | - Daniel E Stanton
- Department of Ecology, Evolution and Behavior, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Gulnara Tagirdzhanova
- Department of Biological Sciences CW405, University of Alberta, Edmonton, AB, T6G 2R3, Canada
| |
Collapse
|
36
|
Gevi F, Leo P, Cassaro A, Pacelli C, de Vera JPP, Rabbow E, Timperio AM, Onofri S. Metabolomic Profile of the Fungus Cryomyces antarcticus Under Simulated Martian and Space Conditions as Support for Life-Detection Missions on Mars. Front Microbiol 2022; 13:749396. [PMID: 35633719 PMCID: PMC9133366 DOI: 10.3389/fmicb.2022.749396] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 03/14/2022] [Indexed: 11/29/2022] Open
Abstract
The identification of traces of life beyond Earth (e.g., Mars, icy moons) is a challenging task because terrestrial chemical-based molecules may be destroyed by the harsh conditions experienced on extraterrestrial planetary surfaces. For this reason, studying the effects on biomolecules of extremophilic microorganisms through astrobiological ground-based space simulation experiments is significant to support the interpretation of the data that will be gained and collected during the ongoing and future space exploration missions. Here, the stability of the biomolecules of the cryptoendolithic black fungus Cryomyces antarcticus, grown on two Martian regolith analogues and on Antarctic sandstone, were analysed through a metabolomic approach, after its exposure to Science Verification Tests (SVTs) performed in the frame of the European Space Agency (ESA) Biology and Mars Experiment (BIOMEX) project. These tests are building a set of ground-based experiments performed before the space exposure aboard the International Space Station (ISS). The analysis aimed to investigate the effects of different mineral mixtures on fungal colonies and the stability of the biomolecules synthetised by the fungus under simulated Martian and space conditions. The identification of a specific group of molecules showing good stability after the treatments allow the creation of a molecular database that should support the analysis of future data sets that will be collected in the ongoing and next space exploration missions.
Collapse
Affiliation(s)
- Federica Gevi
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Viterbo, Italy
| | - Patrick Leo
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Viterbo, Italy
- Department of Environmental Sciences, Informatics and Statistics, University Ca’ Foscari of Venice, Venice, Italy
| | - Alessia Cassaro
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Viterbo, Italy
| | | | | | - Elke Rabbow
- German Aerospace Centre, Institute of Aerospace Medicine (DLR), Cologne, Germany
| | - Anna Maria Timperio
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Viterbo, Italy
| | - Silvano Onofri
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Viterbo, Italy
| |
Collapse
|
37
|
Acquisition of desiccation tolerance in Haematococcus pluvialis requires photosynthesis and coincides with lipid and astaxanthin accumulation. ALGAL RES 2022. [DOI: 10.1016/j.algal.2022.102699] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
38
|
Trobajo S, Fernández-Salegui AB, Hurtado P, Terrón A, Martínez I. Interspecific and intraspecific variability of water use traits in macrolichen species in a fragmented landscape along a climatic ecotone area. Fungal Biol 2022; 126:438-448. [DOI: 10.1016/j.funbio.2022.04.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Revised: 04/24/2022] [Accepted: 04/28/2022] [Indexed: 11/16/2022]
|
39
|
Metabolite Profiling in Green Microalgae with Varying Degrees of Desiccation Tolerance. Microorganisms 2022; 10:microorganisms10050946. [PMID: 35630392 PMCID: PMC9144557 DOI: 10.3390/microorganisms10050946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 04/27/2022] [Accepted: 04/29/2022] [Indexed: 11/17/2022] Open
Abstract
Trebouxiophyceae are microalgae occupying even extreme environments such as polar regions or deserts, terrestrial or aquatic, and can occur free-living or as lichen photobionts. Yet, it is poorly understood how environmental factors shape their metabolism. Here, we report on responses to light and temperature, and metabolic adjustments to desiccation in Diplosphaera epiphytica, isolated from a lichen, and Edaphochlorella mirabilis, isolated from Tundra soil, assessed via growth and photosynthetic performance parameters. Metabolite profiling was conducted by GC–MS. A meta-analysis together with data from a terrestrial and an aquatic Chlorella vulgaris strain reflected elements of phylogenetic relationship, lifestyle, and relative desiccation tolerance of the four algal strains. For example, compatible solutes associated with desiccation tolerance were up-accumulated in D. epiphytica, but also sugars and sugar alcohols typically produced by lichen photobionts. The aquatic C. vulgaris, the most desiccation-sensitive strain, showed the greatest variation in metabolite accumulation after desiccation and rehydration, whereas the most desiccation-tolerant strain, D. epiphytica, showed the least, suggesting that it has a more efficient constitutive protection from desiccation and/or that desiccation disturbed the metabolic steady-state less than in the other three strains. The authors hope that this study will stimulate more research into desiccation tolerance mechanisms in these under-investigated microorganisms.
Collapse
|
40
|
Wang Z, Lu C, Chen J, Luo Q, Yang R, Gu D, Wang T, Zhang P, Chen H. Physiological and multi-omics responses of Neoporphyra haitanensis to dehydration-rehydration cycles. BMC PLANT BIOLOGY 2022; 22:168. [PMID: 35369869 PMCID: PMC8978406 DOI: 10.1186/s12870-022-03547-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 03/22/2022] [Indexed: 06/14/2023]
Abstract
BACKGROUND Seaweeds in the upper intertidal zone experience extreme desiccation during low tide, followed by rapid rehydration during high tide. Porphyra sensu lato are typical upper intertidal seaweeds. Therefore, it is valuable to investigate the adaptive mechanisms of seaweed in response to dehydration-rehydration stress. RESULTS A reduction in photosynthetic capacity and cell shrinkage were observed when N. haitanensis was dehydrated, and such changes were ameliorated once rehydrated. And the rate and extent of rehydration were affected by the air flow speed, water content before rehydration, and storage temperature and time. Rapid dehydration at high air-flow speed and storage at - 20 °C with water content of 10% caused less damage to N. haitanensis and better-protected cell activity. Moreover, proteomic and metabolomic analyses revealed the abundance members of the differentially expressed proteins (DEPs) and differentially abundant metabolites (DAMs) mainly involved in antioxidant system and osmotic regulation. The ascorbic acid-glutathione coupled with polyamine antioxidant system was enhanced in the dehydration response of N. haitanensis. The increased soluble sugar content, the accumulated polyols, but hardly changed (iso)floridoside and insignificant amount of sucrose during dehydration indicated that polyols as energetically cheaper organic osmolytes might help resist desiccation. Interestingly, the recovery of DAMs and DEPs upon rehydration was fast. CONCLUSIONS Our research results revealed that rapid dehydration and storage at - 20 °C were beneficial for recovery of N. haitanensis. And the strategy to resist dehydration was strongly directed toward antioxidant activation and osmotic regulation. This work provided valuable insights into physiological changes and adaptative mechanism in desiccation, which can be applied for seaweed farming.
Collapse
Affiliation(s)
- Zekai Wang
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Ningbo University, Ningbo, 315211, Zhejiang, China
| | - Caiping Lu
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture, Ningbo University, Ningbo, 315211, Zhejiang, China
| | - Juanjuan Chen
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Ningbo University, Ningbo, 315211, Zhejiang, China.
| | - Qijun Luo
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture, Ningbo University, Ningbo, 315211, Zhejiang, China
| | - Rui Yang
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Ningbo University, Ningbo, 315211, Zhejiang, China
| | - Denghui Gu
- Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture, Ningbo University, Ningbo, 315211, Zhejiang, China
| | - Tiegan Wang
- Zhejiang Mariculture Research Institute, Wenzhou, 325005, China
| | - Peng Zhang
- Zhejiang Mariculture Research Institute, Wenzhou, 325005, China
| | - Haimin Chen
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Ningbo University, Ningbo, 315211, Zhejiang, China.
| |
Collapse
|
41
|
Morillas L, Roales J, Cruz C, Munzi S. Non-Toxic Increases in Nitrogen Availability Can Improve the Ability of the Soil Lichen Cladonia rangiferina to Cope with Environmental Changes. J Fungi (Basel) 2022; 8:jof8040333. [PMID: 35448564 PMCID: PMC9025437 DOI: 10.3390/jof8040333] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 03/11/2022] [Accepted: 03/16/2022] [Indexed: 11/30/2022] Open
Abstract
Climate change and atmospheric nitrogen (N) deposition on drylands are greatly threatening these especially vulnerable areas. Soil biocrust-forming lichens in drylands can provide early indicators of these disturbances and play a pivotal role, as they contribute to key ecosystem services. In this study, we explored the effects of different long-term water availability regimes simulating climate changes and their interaction with N addition on the physiological response of the soil lichen Cladonia rangiferina. Three sets of this lichen were subjected to control, reduced watering, and reduced watering and N addition (40 kg NH4NO3 ha−1 year−1) treatments for 16 months. Finally, all samples were subjected to daily hydration cycles with N-enriched water at two levels (40 and 80 kg NH4NO3 ha−1 year−1) for 23 days. We found that reduced watering significantly decreased the vitality of this lichen, whereas N addition unexpectedly helped lichens subjected to reduced watering to cope with stress produced by high temperatures. We also found that long-term exposure to N addition contributed to the acclimation to higher N availability. Overall, our data suggest that the interactions between reduced watering and increased N supply and temperature have an important potential to reduce the physiological performance of this soil lichen.
Collapse
Affiliation(s)
- Lourdes Morillas
- Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Bloco C2, 1749-016 Lisbon, Portugal; (J.R.); (C.C.); (S.M.)
- Correspondence:
| | - Javier Roales
- Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Bloco C2, 1749-016 Lisbon, Portugal; (J.R.); (C.C.); (S.M.)
- Departamento de Sistemas Físicos, Químicos y Naturales, Universidad Pablo de Olavide, Ctra. Utrera Km 1, 41013 Seville, Spain
| | - Cristina Cruz
- Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Bloco C2, 1749-016 Lisbon, Portugal; (J.R.); (C.C.); (S.M.)
| | - Silvana Munzi
- Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Bloco C2, 1749-016 Lisbon, Portugal; (J.R.); (C.C.); (S.M.)
- Centro Interuniversitário de História das Ciências e da Tecnologia Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, Portugal
| |
Collapse
|
42
|
Kidron GJ, Kronenfeld R. Dew and fog as possible evolutionary drivers? The expansion of crustose and fruticose lichens in the Negev is respectively mainly dictated by dew and fog. PLANTA 2022; 255:32. [PMID: 34988709 DOI: 10.1007/s00425-021-03817-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Accepted: 12/28/2021] [Indexed: 06/14/2023]
Abstract
The expansion of crustose lichens in the Negev is principally determined by dew and that of fruticose lichens by fog. Crustose and fruticose lichens are largely adapted to dew and fog, respectively. Although crustose and fruticosea lichens were shown to efficiently use dew and fog, the link between their expansion and the occurrence of dew and fog has never been shown experimentally. This is also the case for the Negev Desert Highlands, where (i) dewless habitats were not inhabited by lichens and (ii) an increase in fruticose lichens with high-altitude fog-prone areas was noted, leading us to hypothesize that the expansion of crustose and fruticose lichens is mainly linked to dew and fog, respectively. Experiments aiming to compare the non-rainfall water (NRW) were conducted. We used cloths attached to 7 cm-high cobbles to mimic crustose lichens (MCL), cloths placed horizontally aboveground to evaluate the amount of NRW without the presence of the cobble (CoP), cloths attached to a wire scaffold mimicking fruticose lichens (MFL), and cloths attached to glass plates (CPM) that served as a reference. Substrate temperatures were compared to the dew point temperature. In addition, sprinkling experiments, which mimicked fog under variable wind speeds (0.9, 1.4, 3.3 and 5.7 m s-1), were also conducted. NRW followed the pattern: MCL ≈ CPM > CoP > > MFL. While MCL yielded substantially higher amounts of NRW (0.09 mm) in comparison to MFL (0.04 mm) during dew events, similar amounts were obtained by both substrates (0.15-0.16 mm) following fog. However, fog interception increased substantially with wind speed. The findings may explain the expansion of crustose lichens in extreme deserts benefiting mainly from dew (but also fog), and the proliferation of fruticose lichens in fog-prone areas, especially when accompanied by high-speed winds. While (mainly) high proliferation of crustose lichens may serve as bioindicators for dew in extreme deserts, fruticose lichens may serve as bioindicators for fog.
Collapse
Affiliation(s)
- Giora J Kidron
- Institute of Earth Sciences, The Hebrew University, Givat Ram Campus, 91904, Jerusalem, Israel.
| | - Rafael Kronenfeld
- Meteorological Unit, Israel Meteorological Service, 84993, Kibbutz Sede Boqer, Israel
| |
Collapse
|
43
|
Chowaniec K, Rola K. Evaluation of the importance of ionic and osmotic components of salt stress on the photosynthetic efficiency of epiphytic lichens. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2022; 28:107-121. [PMID: 35210716 PMCID: PMC8847468 DOI: 10.1007/s12298-022-01134-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 01/12/2022] [Accepted: 01/13/2022] [Indexed: 05/25/2023]
Abstract
UNLABELLED Salt stress can significantly disrupt the functioning of lichens which are self-sufficient symbiotic organisms inhabiting various severe environments. The aim was to test the effect of salt and sucrose on the photosynthetic efficiency of two selected epiphytic lichens inhabiting the interior of the land. Firstly, we compared the effect of salt and sucrose solutions of different concentrations. Secondly, the effect of salt and sucrose solutions with identical osmotic pressures was compared. The results showed that short-term salt stress leads to a significant reduction of F V /F M , greater changes in chlorophyll fluorescence parameters and OJIP transients compared to the osmotic effects induced by sucrose. This proved that the negative impact of salt stress is associated primarily with ionic effects. The most symptomatic effect of the ionic stress was a significant reduction of the utilisation of trapped energy in electron transport and thereby down-regulation of electron transfer. Since lichens are resistant to a temporary lack of water, ionic stress could have more serious consequences than osmotic stress itself. Hypogymnia physodes was more sensitive to salt stress than Pseudevernia furfuracea, but the reduction of photosynthetic efficiency was not permanent since after 24 h F V /F M returned to the level characteristic for healthy lichens. Nevertheless, repeated exposure to salt may reduce the vitality of lichens growing along communication routes sprinkled with salt in the winter season. Finally, the changes in certain JIP-test parameters were stronger than F V /F M , thus they could be better indicators of salt stress in lichens. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s12298-022-01134-2.
Collapse
Affiliation(s)
- Karolina Chowaniec
- Faculty of Biology, Institute of Botany, Jagiellonian University, Gronostajowa 3, 30-387 Kraków, Poland
| | - Kaja Rola
- Faculty of Biology, Institute of Botany, Jagiellonian University, Gronostajowa 3, 30-387 Kraków, Poland
| |
Collapse
|
44
|
Mishra A, Tung S, Sruti VS, Shreenidhi P, Dey S. Desiccation stress acts as cause as well as cost of dispersal in Drosophila melanogaster. Am Nat 2021; 199:E111-E123. [DOI: 10.1086/718641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
|
45
|
Bower DM, Yang CSC, Hewagama T, Nixon CA, Aslam S, Whelley PL, Eigenbrode JL, Jin F, Ruliffson J, Kolasinski JR, Samuels AC. Spectroscopic characterization of samples from different environments in a Volcano-Glacial region in Iceland: Implications for in situ planetary exploration. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 263:120205. [PMID: 34332244 DOI: 10.1016/j.saa.2021.120205] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2021] [Revised: 07/14/2021] [Accepted: 07/16/2021] [Indexed: 06/13/2023]
Abstract
Raman spectroscopy and laser induced breakdown spectroscopy (LIBS) are complementary techniques that together can provide a comprehensive characterization of geologic environments. For landed missions with constrained access to target materials on other planetary bodies, discerning signatures of life and habitability can be daunting, particularly where the preservation of organic compounds that contain the building blocks of life is limited. The main challenge facing any spectroscopy measurements of natural samples is the complicated spectra that often contain signatures for multiple components, particularly in rocks that are composed of several minerals with surfaces colonized by microbes. The goal of this study was to use the combination of Raman spectroscopy and LIBS to discern different environmental regimes based on the identification of minerals and biomolecules in rocks and sediments. Iceland is a terrestrial volcano-glacial location that offers a range of planetary analog environments, including volcanically active regions, extensive lava fields, geothermal springs, and large swaths of ice-covered terrain that are relevant to both rocky and icy planetary bodies. We combined portable VIS (532 nm) and NIR (785 nm) Raman spectroscopy, VIS micro-Raman spectroscopic mapping, and UV/VIS/NIR (200 - 1000 nm) and Mid-IR (5.6 - 10 μm, 1785 - 1000 cm-1) laser induced breakdown spectroscopy (LIBS) to characterize the mineral assemblages, hydrated components, and biomolecules in rock and sediment samples collected from three main sites in the volcanically active Kverkfjöll-Vatnajökull region of Iceland: basalt and basalt-hosted carbonate rind from Hveragil geothermal stream, volcanic sediments from the base of Vatnajökull glacier at Kverkfjöll, and lava from the nearby Holuhraun lava field. With our combination of techniques, we were able to identify major mineral polytypes typical for each sample set, as well as a large diversity of biomolecules typical for lichen communities across all samples. The anatase we observed using micro-Raman spectroscopic mapping of the lava compared with the volcanic sediment suggested different formation pathways: lava anatase formed authigenically, sediment anatase could have formed in association with microbial weathering. Mn-oxide, only detected in the carbonate samples, seems to have two possible formation pathways, either by fluvial or microbial weathering or both. Even with our ability to detect a wide diversity of biomolecules and minerals in all of the samples, there was not enough variation between each set to distinguish different environments based on the limited measurements done for this study.
Collapse
Affiliation(s)
- Dina M Bower
- University of Maryland, Department of Astronomy, College Park, MD 20742, USA; NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA.
| | | | - Tilak Hewagama
- NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA.
| | - Conor A Nixon
- NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA.
| | - Shahid Aslam
- NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA.
| | - Patrick L Whelley
- University of Maryland, Department of Astronomy, College Park, MD 20742, USA; NASA Goddard Space Flight Center, Greenbelt, MD 20771, USA.
| | | | - Feng Jin
- Brimrose Corporation of America, Sparks-Glencoe, MD 21152, USA.
| | - Jennifer Ruliffson
- University of North Florida, Department of Chemistry, Jacksonville, FL 32224, USA
| | | | - Alan C Samuels
- Edgewood Chemical Biological Center, Aberdeen Proving Ground, MD 21010, USA.
| |
Collapse
|
46
|
Armaleo D, Chiou L. Modeling in yeast how rDNA introns slow growth and increase desiccation tolerance in lichens. G3 GENES|GENOMES|GENETICS 2021; 11:6347584. [PMID: 34849787 PMCID: PMC8527467 DOI: 10.1093/g3journal/jkab279] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Accepted: 07/16/2021] [Indexed: 11/13/2022]
Abstract
Abstract
We connect ribosome biogenesis to desiccation tolerance in lichens, widespread symbioses between specialized fungi (mycobionts) and unicellular phototrophs. We test whether the introns present in the nuclear ribosomal DNA of lichen mycobionts contribute to their anhydrobiosis. Self-splicing introns are found in the rDNA of several eukaryotic microorganisms, but most introns populating lichen rDNA are unable to self-splice, being either catalytically impaired group I introns, or spliceosomal introns ectopically present in rDNA. Although the mycobiont’s splicing machinery removes all introns from rRNA, Northern analysis indicates delayed post-transcriptional removal during rRNA processing, suggesting interference with ribosome assembly. To study the effects of lichen introns in a model system, we used CRISPR to introduce a spliceosomal rDNA intron from the lichen fungus Cladonia grayi into all nuclear rDNA copies of Saccharomyces cerevisiae, which lacks rDNA introns. Three intron-bearing yeast mutants were constructed with the intron inserted either in the 18S rRNA genes, the 25S rRNA genes, or in both. The mutants removed the introns correctly but had half the rDNA genes of the wildtype, grew 4.4–6 times slower, and were 40–1700 times more desiccation tolerant depending on intron position and number. Intracellular trehalose, a disaccharide implicated in desiccation tolerance, was detected at low concentration. Our data suggest that the interference of the splicing machinery with ribosome assembly leads to fewer ribosomes and proteins and to slow growth and increased desiccation tolerance in the yeast mutants. The relevance of these findings for slow growth and desiccation tolerance in lichens is discussed.
Collapse
Affiliation(s)
- Daniele Armaleo
- Department of Biology, Duke University, Durham, NC 27708, USA
| | - Lilly Chiou
- Department of Biology, Duke University, Durham, NC 27708, USA
- Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
| |
Collapse
|
47
|
|
48
|
Leavitt SD, Hollinger J, Summerhays S, Munger I, Allen J, Smith B. Alpine lichen diversity in an isolated sky island in the Colorado Plateau, USA-Insight from an integrative biodiversity inventory. Ecol Evol 2021; 11:11090-11101. [PMID: 34429905 PMCID: PMC8366874 DOI: 10.1002/ece3.7896] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Revised: 06/21/2021] [Accepted: 06/23/2021] [Indexed: 11/12/2022] Open
Abstract
Lichens are major components of high altitude/latitude ecosystems. However, accurately characterizing their biodiversity is challenging because these regions and habitats are often underexplored, there are numerous poorly known taxonomic groups, and morphological variation in extreme environments can yield conflicting interpretations. Using an iterative taxonomic approach based on over 800 specimens and incorporating both traditional morphology-based identifications and information from the standard fungal DNA barcoding marker, we compiled a voucher-based inventory of biodiversity of lichen-forming fungi in a geographically limited and vulnerable alpine community in an isolated sky island in the Colorado Plateau, USA-the La Sal Mountains. We used the newly proposed Assemble Species by Automatic Partitioning (ASAP) approach to empirically delimit candidate species-level lineages from family-level multiple sequence alignments. Specimens comprising DNA-based candidate species were evaluated using traditional taxonomically diagnostic phenotypic characters to identify specimens to integrative species hypotheses and link these, where possible, to currently described species. Despite the limited alpine habitat (ca. 3,250 ha), we document the most diverse alpine lichen community known to date from the southern Rocky Mountains, with up to 240 candidate species/species-level lineages of lichen-forming fungi. 139 species were inferred using integrative taxonomy, plus an additional 52 candidate species within 29 different putative species complexes. Over 68% of sequences could not be assigned to species-level rank with statistical confidence, corroborating the limited utility of current sequence repositories for species-level DNA barcoding of lichen-forming fungi. By integrating vouchered specimens, DNA sequence data, and photographic documentation, we provide an important baseline of lichen-forming fungal diversity for the limited alpine habitat in the Colorado Plateau. These data provide an important resource for subsequent research in the ecology and evolution of lichens alpine habitats, including DNA barcodes for most putative species/species-level lineages occurring in the La Sal Mountains, and vouchered collections representing any potentially undescribed species that can be used for future taxonomic studies.
Collapse
Affiliation(s)
- Steven D. Leavitt
- M.L. Bean Life Science Museum & Department of BiologyBrigham Young UniversityProvoUtahUSA
| | - Jason Hollinger
- HerbariumDepartment of BiologyWestern Carolina UniversityCullowheeNorth CarolinaUSA
| | | | - Isaac Munger
- Department of BiologyBrigham Young UniversityProvoUtahUSA
| | - Jonah Allen
- Department of BiologyBrigham Young UniversityProvoUtahUSA
| | - Barb Smith
- Wildlife Biologist/Botanist, Moab DistrictManti–La Sal National ForestMoabUtahUSA
| |
Collapse
|
49
|
Effect of Oxidative Stress on Physicochemical Quality of Taiwanese Seagrape (Caulerpa lentillifera) with the Application of Alternating Current Electric Field (ACEF) during Post-Harvest Storage. Processes (Basel) 2021. [DOI: 10.3390/pr9061011] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
This study aims to determine the physicochemical quality of seagrape (Caulerpa lentillifera) as a freshness label for products cultivated in different seasons. The applied post-harvest storage experiments compared between, within and without seawater that led to oxidative stress conditions. Water content, malondialdehyde (MDA) compound, total phenolic content (TPC), and chlorophyll content were observed at 0, 3, 6, and 9 days of storage. The storage without seawater showed sharper quality reductions by reaching 20–40% of water loss, 70–90% of MDA production, 15–25% of TPC reduction, and 40–60% of total chlorophyll degradation. The storage within seawater showed lower quality reductions due to the specific growth rates still reaching 5–10%. This study found that the greater the physicochemical quality, the slower the decomposition rates of the stored seagrape during storage. Therefore, the seagrapes’ obvious discoloration occurred earlier in winter, followed by summer and spring. Kinetics of chlorophyll degradation on seagrape in different seasons meet different order-reactions during storage. Furthermore, alternating current electric field (ACEF) treatment with 125 kV/m of intensity for 60 min can lower the spring seagrapes’ physicochemical quality by reaching 10–30% of inhibition, resulting in the shelf-life extension for up to 12 days of post-harvest storage.
Collapse
|
50
|
Pichler G, Candotto Carniel F, Muggia L, Holzinger A, Tretiach M, Kranner I. Enhanced culturing techniques for the mycobiont isolated from the lichen Xanthoria parietina. Mycol Prog 2021; 20:797-808. [PMID: 34720793 PMCID: PMC8550697 DOI: 10.1007/s11557-021-01707-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 04/01/2021] [Accepted: 04/28/2021] [Indexed: 02/08/2023]
Abstract
Lichens and their isolated symbionts are potentially valuable resources for biotechnological approaches. Especially mycobiont cultures that produce secondary lichen products are receiving increasing attention, but lichen mycobionts are notoriously slow-growing organisms. Sufficient biomass production often represents a limiting factor for scientific and biotechnological investigations, requiring improvement of existing culturing techniques as well as methods for non-invasive assessment of growth. Here, the effects of pH and the supplement of growth media with either D-glucose or three different sugar alcohols that commonly occur in lichens, D-arabitol, D-mannitol and ribitol, on the growth of the axenically cultured mycobiont isolated from the lichen Xanthoria parietina were tested. Either D-glucose or different sugar alcohols were offered to the fungus at different concentrations, and cumulative growth and growth rates were assessed using two-dimensional image analysis over a period of 8 weeks. The mycobiont grew at a pH range from 4.0 to 7.0, whereas no growth was observed at higher pH values. Varying the carbon source in Lilly-Barnett medium (LBM) by replacing 1% D-glucose used in the originally described LBM by either 1%, 2% or 3% of D-mannitol, or 3% of D-glucose increased fungal biomass production by up to 26%, with an exponential growth phase between 2 and 6 weeks after inoculation. In summary, we present protocols for enhanced culture conditions and non-invasive assessment of growth of axenically cultured lichen mycobionts using image analysis, which may be useful for scientific and biotechnological approaches requiring cultured lichen mycobionts. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s11557-021-01707-7.
Collapse
Affiliation(s)
- Gregor Pichler
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria
| | - Fabio Candotto Carniel
- Department of Life Sciences, University of Trieste, Via Giorgieri 10, 34127 Trieste, Italy
| | - Lucia Muggia
- Department of Life Sciences, University of Trieste, Via Giorgieri 10, 34127 Trieste, Italy
| | - Andreas Holzinger
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria
| | - Mauro Tretiach
- Department of Life Sciences, University of Trieste, Via Giorgieri 10, 34127 Trieste, Italy
| | - Ilse Kranner
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria
| |
Collapse
|