Significant enhancement of nitrous oxide energy yields from wastewater achieved by bioaugmentation with a recombinant strain of Pseudomonas aeruginosa

Nitrous oxide (N₂O) is formed during wastewater nitrogen removal processes. It is a strong greenhouse gas, however, if properly captured it can also be used as a renewable energy source. In this study, a nosZ-deficient strain of Pseudomonas aeruginosa was constructed. During growth under denitrifying conditions, the nosZ-deficient strain was more highly transcribing other genes from the denitrification pathway (narG, nirS, and norB) than the wild-type strain. This strain could also convert 85% of NO₂^--N to N₂O when it was grown with acetate compared to <0.6% by the wild-type strain. When a bioreactor treating synthetic wastewater with high NO₂^--N concentrations (700 mg/L) was inoculated with this strain, the N₂O conversion efficiencies were >73% and N₂O comprised 73~81% of the biogas being generated. The energy yield from wastewater in bioaugmented reactors also reached levels as high as 1260 kJ/m³. These results are significant and show that bioaugmentation of reactors during denitrification treatment processes with nosZ-deficient strains of Pseudomonas or other core denitrifying bacteria might be an effective way to enhance N₂O recovery.

Natural and Enhanced Attenuation of Explosives on a Hand Grenade Range

2,4,6-Trinitrotoluene (TNT) and hexahydro-1,3,5-trinitro-1,3,5-triazine (Royal Demolition Explosive, or RDX) deposited on hand grenade training ranges can leach through the soil and impact shallow groundwater. A 27-mo field monitoring project was conducted to evaluate the transport and attenuation of high explosives in variably saturated soils at an active grenade range located at Fort Bragg, NC. Two approaches were evaluated: (i) natural attenuation in grenade Bay C; and (ii) enhanced attenuation in Grenade Bay T. There was no evidence of TNT accumulation or leaching in surface soils or pore water in either bay, consistent with parallel laboratory studies showing aerobic and anaerobic biodegradation of TNT. In the untreated Bay C, the low saturated hydraulic conductivity () combined with high rainfall and warm summer temperatures resulted in reducing conditions (low oxidation-reduction potential), an increase in dissolved Mn, and a rapid decline in nitrate and RDX. In Bay T, the somewhat greater and lower soil organic C level resulted in more oxidizing conditions with greater RDX leaching. A single-spray application of glycerin and lignosulfonate to the soil surface in Bay T was effective in generating reducing conditions and stimulating RDX biodegradation for ∼1 yr.

Role of Slow-Release Nanocomposite Fertilizers on Nitrogen and Phosphate Availability in Soil

Developing efficient crop fertilization practices has become more and more important due to the ever-increasing global demand for food production. One approach to improving the efficiency of phosphate and urea fertilization is to improve their interaction through nanocomposites that are able to control the release of urea and P in the soil. Nanocomposites were produced from urea (Ur) or extruded thermoplastic starch/urea (TPSUr) blends as a matrix in which hydroxyapatite particles (Hap) were dispersed at ratios 50% and 20% Hap. Release tests and two incubation experiments were conducted in order to evaluate the role played by nanocomposites in controlling the availability of nitrogen and phosphate in the soil. Tests revealed an interaction between the fertilizer components and the morphological changes in the nanocomposites. TPSUr nanocomposites provided a controlled release of urea and increased the release of phosphorus from Hap in citric acid solution. The TPSUr nanocomposites also had lower NH₃ volatilization compared to a control. The interaction resulting from dispersion of Hap within a urea matrix reduced the phosphorus adsorption and provided higher sustained P availability after 4 weeks of incubation in the soil.

Shallow groundwater denitrification in riparian zones of a headwater agricultural landscape

Riparian zones adjacent to cropped lands are effective at reducing nitrate (NO) loads to receiving water bodies primarily through plant assimilation and denitrification. Denitrification represents a permanent removal pathway and a greenhouse gas source, converting NO to inert N gas or nitrous oxide (NO), and has been the subject of many studies in agricultural landscapes. Despite the prevailing notion that riparian zones can be areas of enhanced denitrification, there is a lack of in situ denitrification measurements from these areas that buffer streams and rivers from NO originating in upland cropped soils, especially over time scales that capture seasonal dynamics. We measured in situ groundwater denitrification rates in two riparian zones of an intensive dairy farm located in the headwaters of the Susquehanna River. Denitrification rates determined monthly over a 1-yr period with the N-NO push-pull method ranged from 0 to 4177 μg N kg soil d (mean, 830 ± 193 μg N kg soil d). Denitrification showed a distinct seasonal pattern, with highest rates observed in the spring and summer, concomitant with warmer temperatures and decreasing dissolved oxygen. We estimate an annual N loss of 470 ± 116 kg yr ha of riparian zone via denitrification in the shallow saturated zone, with the potential for >20% of this amount occurring as NO. Total denitrification from shallow groundwater in the riparian zone was equivalent to 32% of manure N spread on the adjacent upland field, confirming the importance of riparian zones in agricultural landscapes at controlling N loads entering downstream waters.

Nitrous oxide emission from riparian buffers in relation to vegetation and flood frequency

The nitrate (NO(3)(-)) removal capacity of riparian zones is well documented, but information is lacking with regard to N(2)O emission from riparian ecosystems and factors controlling temporal dynamics of this potent greenhouse gas. We monitored N(2)O fluxes (static chambers) and measured denitrification (C(2)H(2) block using soil cores) at six riparian sites along a fourth-order stretch of the White River (Indiana, USA) to assess the effect of flood regime, vegetation type, and forest maturity on these processes. The study sites included shrub/grass, aggrading (<15 yr-old), and mature (>80 yr) forests that were flooded either frequently (more than four to six times per year), occasionally (two to three times per year), or rarely (every 20 yr). While the effect of forest maturity and vegetation type (0.52 and 0.65 mg N(2)O-m(-2) d(-1) in adjacent grassed and forested sites) was not significant, analysis of variance (ANOVA) revealed a significant effect ( < 0.01) of flood regime on N(2)O emission. Among the mature forests, mean N(2)O flux was in this order: rarely flooded (0.33) < occasionally flooded (0.99) < frequently flooded (1.72). Large pulses of N(2)O emission (up to 80 mg N(2)O-m(-2) d(-1)) occurred after flood events, but the magnitude of the flux enhancement varied with flood event, being higher after short-duration than after long-duration floods. This pattern was consistent with the inverse relationship between soil moisture and mole fraction of N(2)O, and instances of N(2)O uptake near the river margin after flood events. These results highlight the complexity of N(2)O dynamics in riparian zones and suggest that detailed flood analysis (frequency and duration) is required to determine the contribution of riparian ecosystems to regional N(2)O budget.

Nitrous oxide flux from landfill leachate-sawdust nitrogenous compost

Composted nitrogenous waste has the potential to produce excessive amounts of nitrous oxide (N2O), a potent greenhouse gas that also contributes to stratospheric ozone depletion. In this laboratory study, sawdust was irrigated with varying amounts of landfill leachate with high NH4+-N content (3950 mg l(-1)). Physicochemical properties, including the amount of N2O produced, were monitored during the composting process over 28 days. A rapid decline in NH4+-N in the first 4 days and increasing NO3--N for 11 days was followed by lower but stabilized levels of available-N, even with repeated leachate irrigation. Less than 0.03% of the leachate-applied N was lost as N2O. Higher leachate applications as much as tripled N2O production, but this represented a lesser proportion overall of the total nitrogen. Addition of glucose to the composting process had no significant effect on N2O production. The derived sawdust-leachate compost supported healthy growth of Sesbania rostrata. It is concluded that compost can be produced from sawdust irrigated with landfill leachate without substantial emission of N2O, although excessive flux of N2O remains about high application rates over longer time periods.

Pseudomonas stutzeri nitrite reductase gene abundance in environmental samples measured by real-time PCR

We used real-time PCR to quantify the denitrifying nitrite reductase gene (nirS), a functional gene of biogeochemical significance. The assay was tested in vitro and applied to environmental samples. The primer-probe set selected was specific for nirS sequences that corresponded approximately to the Pseudomonas stutzeri species. The assay was linear from 1 to 10(6) gene copies (r2 = 0.999). Variability at low gene concentrations did not allow detection of twofold differences in gene copy number at less than 100 copies. DNA spiking and cell-addition experiments gave predicted results, suggesting that this assay provides an accurate measure of P. stutzeri nirS abundance in environmental samples. Although P. stutzeri abundance was high in lake sediment and groundwater samples, we detected low or no abundance of this species in marine sediment samples from Puget Sound (Wash.) and from the Washington ocean margin. These results suggest that P. stutzeri may not be a dominant marine denitrifier.

Effect of liquid manure on the mole fraction of nitrous oxide evolved from soil containing nitrate

The same emission factor is applied to fertiliser N and manure N when calculating national N2O inventories. Manures and fertilisers are often applied together to meet the N needs of the crop, but little is known about potential interactions leading to an increase in denitrification rate or a change in the composition of the end-products of denitrification. We used the 15N gas-flux method in a laboratory experiment to quantify the effect of liquid manure (LM) application on the fluxes of N2 and N2O when the soil contained fertiliser 15NO3-. LM increased the mole fraction of N2O from 0.5 to 0.85 in the first 12 h after application. More than 94% of the N2O was from the reduction of NO3-, probably due to aerobic nitrate respiration as well as respiratory denitrification.

A spatial study of denitrification potential of sediments in Belfast and Strangford Loughs and its significance

The C2H2 inhibition technique was employed to study seasonal denitrification potential rates in sediment slurries from tidal and subtidal sites in Belfast and Strangford Loughs, Northern Ireland. A comparison of denitrification rates obtained from this method with those obtained from the 15N-gas flux method generally showed good agreement. Depth profiles measured up to 1 m showed that denitrification decreased with depth, with highest values in the 0-5-cm fraction. For the Belfast Lough tidal system a multiple regression model was developed which explained 83% of the variation in denitrification potential. The independent variables were water content, sediment temperature, total oxidizable N in porewater and total organic N. The highest rate of denitrification potential, 2100 micromol N m(-2) h(-1), was found in areas where there was a high anthropogenic input of nutrients. Denitrification in sediments in both loughs can play a potentially significant role in removal of NO3- from the overlying water. In Belfast Lough the overall denitrification potential rate matched the external NO3-N inputs, whilst in Strangford Lough it exceeded it by sixfold, which suggests a potential to remove future additional anthropogenic inputs to the Lough.

Evidence that elevated CO2 levels can indirectly increase rhizosphere denitrifier activity

We examined the influence of elevated CO2 concentration on denitrifier enzyme activity in wheat rhizoplanes by using controlled environments and solution culture techniques. Potential denitrification activity was from 3 to 24 times higher on roots that were grown under an elevated CO2 concentration of 1,000 micromoles of CO2 mol-1 than on roots grown under ambient levels of CO2. Nitrogen loss, as determined by a nitrogen mass balance, increased with elevated CO2 levels in the shoot environment and with a high NO3- concentration in the rooting zone. These results indicated that aerial CO2 concentration can play a role in rhizosphere denitrifier activity.

Inhibition of existing denitrification enzyme activity by chloramphenicol

Chloramphenicol completely inhibited the activity of existing denitrification enzymes in acetylene-block incubations with (i) sediments from a nitrate-contaminated aquifer and (ii) a continuous culture of denitrifying groundwater bacteria. Control flasks with no antibiotic produced significant amounts of nitrous oxide in the same time period. Amendment with chloramphenicol after nitrous oxide production had begun resulted in a significant decrease in the rate of nitrous oxide production. Chloramphenicol also decreased (greater than 50%) the activity of existing denitrification enzymes in pure cultures of Pseudomonas denitrificans that were harvested during log-phase growth and maintained for 2 weeks in a starvation medium lacking electron donor. Short-term time courses of nitrate consumption and nitrous oxide production in the presence of acetylene with P. denitrificans undergoing carbon starvation were performed under optimal conditions designed to mimic denitrification enzyme activity assays used with soils. Time courses were linear for both chloramphenicol and control flasks, and rate estimates for the two treatments were significantly different at the 95% confidence level. Complete or partial inhibition of existing enzyme activity is not consistent with the current understanding of the mode of action of chloramphenicol or current practice, in which the compound is frequently employed to inhibit de novo protein synthesis during the course of microbial activity assays. The results of this study demonstrate that chloramphenicol amendment can inhibit the activity of existing denitrification enzymes and suggest that caution is needed in the design and interpretation of denitrification activity assays in which chloramphenicol is used to prevent new protein synthesis.

Factors controlling nitrification and denitrification: A laboratory study with gel-stabilized liquid cattle manure

Nitrification and denitrification were studied in a millimeterscale microenvironment using a two-phase system with a liquid manure-saturated layer. Samples consisted of liquid cattle manure and air-dried soil stabilized with silica gel, placed between two aerobic soil phases with a water content near field capacity. A high potential for NH4 (+) oxidation developed within 0-2 mm distance from the interface, and NH4 (+) diffused only 10-20 mm into the soil. Some NH4 (+) was probably immobilized by microorganisms in the soil between 0 and 4 days, after which nitrification was the only sink for NH4 (+). A potential for denitrification developed within the manure-saturated zone. Maximum rates of both potential and actual denitrification were recorded by Day 4, but denitrification continued for at least 2-3 weeks. The potential for nitrification peaked after 14 days. When the pH of the manure was adjusted to 5.5, nitrification was reduced close to the interface, and NH4 (+) penetrated further into the soil before it was oxidized. The pH adjustment had an inhibitory effect on denitrification: Both potential and actual rates of denitrification were almost eliminated for several days. The size of the manure-saturated layer strongly affected denitrification losses. With layers of 8 and 16 mm thickness, losses equivalent to 33 and 40% of the original NH4 (+) pool, respectively, were estimated. When manure corresponding to a 12 mm layer was homogeneously mixed with the soil, only 0.3% was lost.

Dynamics of Soil Denitrifier Populations: Relationships between Enzyme Activity, Most-Probable-Number Counts, and Actual N Gas Loss

To better understand temporal variability in soil denitrification, denitrifying enzyme activity (DEA) and denitrifier populations (as determined by most-probable-number [MPN] counts) were measured in field and laboratory experiments. Measurements of DEA and MPN provided highly contradictory indications of denitrifier dynamics. In laboratory incubations, under conditions favoring active denitrification, the synthesis of new denitrifying enzymes and the actual amount of denitrification were closely related. In other experiments, however, both DEA and MPN counts were poor indicators of actual denitrification. In some cases, we found significant increases in DEA but no significant production of N gas. Except with unnaturally high substrate amendments, changes in DEA were small relative both to the persistently high DEA background and to changes in MPN. As estimated by MPN counts, denitrifier populations increased significantly during denitrification events. It was apparent that only a small fraction of the denitrifiers were included in the MPN counts, but it appeared that this isolatable fraction increased during periods of active denitrifier growth. Use of DEA as an index of biomass of cells which have synthesized denitrifying enzymes suggested that denitrifier populations were persistent, stable, and much larger than indicated by MPN procedures.