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Özlü S, Uçar A, Erkuş T, Yasun S, Nicholson AD, Elibol O. Effects of flock age, storage temperature, and short period of incubation during egg storage, on the albumen quality, embryonic development and hatchability of long stored eggs. Br Poult Sci 2021; 62:611-619. [PMID: 33555203 DOI: 10.1080/00071668.2021.1887454] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
1. The effect of breeder flock age, storage temperature and a short period of incubation during egg storage (SPIDES) on albumen quality, development of blastoderm, and hatchability of long-stored eggs was evaluated.2. Hatching eggs were collected from 28-week-old (young) and 40-week-old (prime) Ross female line grandparent flocks and were stored for 14 d at 12, 15 or 18°C. During storage, the eggs were either kept continuously in the storage room (control) or were subjected to SPIDES treatment.3. Embryonic development was more advanced in eggs from the prime flock, exposed to SPIDES and warmer (18°C) storage temperature (P ≤ 0.05). There was a difference in the albumen pH for flock ages (P < 0.05), but the SPIDES treatment did not affect albumen height and pH (P > 0.05). On d 14 of storage, albumen pH was positively (P < 0.05) correlated with storage temperature. Hatchability was higher in the prime flock (P < 0.05).4. At both flock ages, hatchability increased (P < 0.05) by storing the eggs at 15°C, compared to 18°C, with 12°C intermediate. The hatchability improvement was due to reduced early embryonic mortality.5. The SPIDES treatment decreased late embryonic mortality and the percentage of second-grade chicks (P < 0.05), which increased the hatchability of fertile eggs (P < 0.05). SPIDES only reduced (P < 0.05) early embryonic mortality in eggs stored at 18°C.6. The highest hatchability was observed in the eggs stored at 15°C and exposed to one SPIDES treatment during 14 d storage.
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Affiliation(s)
- S Özlü
- Department of Animal Science, Faculty of Agriculture, Ankara University, Ankara, Turkey
| | - A Uçar
- Department of Animal Science, Faculty of Agriculture, Ankara University, Ankara, Turkey
| | - T Erkuş
- Aviagen Ltd, Newbridge, Midlothian, UK
| | - S Yasun
- Aviagen Anadolu, Ankara, Turkey
| | | | - O Elibol
- Department of Animal Science, Faculty of Agriculture, Ankara University, Ankara, Turkey
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Shioda K, Odajima J, Kobayashi M, Kobayashi M, Cordazzo B, Isselbacher KJ, Shioda T. Transcriptomic and Epigenetic Preservation of Genetic Sex Identity in Estrogen-feminized Male Chicken Embryonic Gonads. Endocrinology 2021; 162:5973467. [PMID: 33170207 PMCID: PMC7745639 DOI: 10.1210/endocr/bqaa208] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Indexed: 12/18/2022]
Abstract
Whereas in ovo exposure of genetically male (ZZ) chicken embryos to exogenous estrogens temporarily feminizes gonads at the time of hatching, the morphologically ovarian ZZ-gonads (FemZZs for feminized ZZ gonads) are masculinized back to testes within 1 year. To identify the feminization-resistant "memory" of genetic male sex, FemZZs showing varying degrees of feminization were subjected to transcriptomic, DNA methylome, and immunofluorescence analyses. Protein-coding genes were classified based on their relative mRNA expression across normal ZZ-testes, genetically female (ZW) ovaries, and FemZZs. We identified a group of 25 genes that were strongly expressed in both ZZ-testes and FemZZs but dramatically suppressed in ZW-ovaries. Interestingly, 84% (21/25) of these feminization-resistant testicular marker genes, including the DMRT1 master masculinizing gene, were located in chromosome Z. Expression of representative marker genes of germline cells (eg, DAZL or DDX4/VASA) was stronger in FemZZs than normal ZZ-testes or ZW-ovaries. We also identified 231 repetitive sequences (RSs) that were strongly expressed in both ZZ-testes and FemZZs, but these RSs were not enriched in chromosome Z. Although 94% (165/176) of RSs exclusively expressed in ZW-ovaries were located in chromosome W, no feminization-inducible RS was detected in FemZZs. DNA methylome analysis distinguished FemZZs from normal ZZ- and ZW-gonads. Immunofluorescence analysis of FemZZ gonads revealed expression of DMRT1 protein in medullary SOX9+ somatic cells and apparent germline cell populations in both medulla and cortex. Taken together, our study provides evidence that both somatic and germline cell populations in morphologically feminized FemZZs maintain significant transcriptomic and epigenetic memories of genetic sex.
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Affiliation(s)
- Keiko Shioda
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Junko Odajima
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Misato Kobayashi
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Mutsumi Kobayashi
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Bianca Cordazzo
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
| | - Kurt J Isselbacher
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
- Department of Medicine, Harvard Medical School, Boston, Massachusetts, USA
| | - Toshi Shioda
- Center for Cancer Research, Massachusetts General Hospital, Charlestown, Massachusetts, USA
- Department of Medicine, Harvard Medical School, Boston, Massachusetts, USA
- Correspondence: Toshi Shioda, Massachusetts General Hospital Center for Cancer Research, Building 149 – 7th Floor, 13th Street, Charlestown, Massachusetts 02129, USA. E-mail:
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Lang AS, Austin SH, Harris RM, Calisi RM, MacManes MD. Stress-mediated convergence of splicing landscapes in male and female rock doves. BMC Genomics 2020; 21:251. [PMID: 32293250 PMCID: PMC7092514 DOI: 10.1186/s12864-020-6600-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Accepted: 02/20/2020] [Indexed: 01/01/2023] Open
Abstract
BACKGROUND The process of alternative splicing provides a unique mechanism by which eukaryotes are able to produce numerous protein products from the same gene. Heightened variability in the proteome has been thought to potentiate increased behavioral complexity and response flexibility to environmental stimuli, thus contributing to more refined traits on which natural and sexual selection can act. While it has been long known that various forms of environmental stress can negatively affect sexual behavior and reproduction, we know little of how stress can affect the alternative splicing associated with these events, and less still about how splicing may differ between sexes. Using the model of the rock dove (Columba livia), our team previously uncovered sexual dimorphism in the basal and stress-responsive gene transcription of a biological system necessary for facilitating sexual behavior and reproduction, the hypothalamic-pituitary-gonadal (HPG) axis. In this study, we delve further into understanding the mechanistic underpinnings of how changes in the environment can affect reproduction by testing the alternative splicing response of the HPG axis to an external stressor in both sexes. RESULTS This study reveals dramatic baseline differences in HPG alternative splicing between males and females. However, after subjecting subjects to a restraint stress paradigm, we found a significant reduction in these differences between the sexes. In both stress and control treatments, we identified a higher incidence of splicing activity in the pituitary in both sexes as compared to other tissues. Of these splicing events, the core exon event is the most abundant form of splicing and more frequently occurs in the coding regions of the gene. Overall, we observed less splicing activity in the 3'UTR (untranslated region) end of transcripts than the 5'UTR or coding regions. CONCLUSIONS Our results provide vital new insight into sex-specific aspects of the stress response on the HPG axis at an unprecedented proximate level. Males and females uniquely respond to stress, yet exhibit splicing patterns suggesting a convergent, optimal splicing landscape for stress response. This information has the potential to inform evolutionary theory as well as the development of highly-specific drug targets for stress-induced reproductive dysfunction.
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Affiliation(s)
- Andrew S Lang
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, USA.
| | - Suzanne H Austin
- Department of Neurobiology, Physiology and Behavior, University of California, Davis, USA
| | - Rayna M Harris
- Department of Neurobiology, Physiology and Behavior, University of California, Davis, USA
| | - Rebecca M Calisi
- Department of Neurobiology, Physiology and Behavior, University of California, Davis, USA
| | - Matthew D MacManes
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, USA
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Abstract
Evolution of genetic mechanisms of sex determination led to two processes causing sex differences in somatic phenotypes: gonadal differentiation and sex chromosome dosage inequality. In species with heteromorphic sex chromosomes, the sex of the individual is established at the time of formation of the zygote, leading to inherent sex differences in expression of sex chromosome genes beginning as soon as the embryonic transcriptome is activated. The inequality of sex chromosome gene expression causes sexual differentiation of the gonads and of non-gonadal tissues. The difference in gonad type in turn causes lifelong differences in gonadal hormones, which interact with unequal effects of X and Y genes acting within cells. Separating the effects of gonadal hormones and sex chromosomes has been possible using mouse models in which gonadal determination is separated from the sex chromosomes, allowing comparison of XX and XY mice with the same type of gonad. Sex differences caused by gonadal hormones and sex chromosomes affect basic physiology and disease mechanisms in most or all tissues.
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Morris KR, Hirst CE, Major AT, Ezaz T, Ford M, Bibby S, Doran TJ, Smith CA. Gonadal and Endocrine Analysis of a Gynandromorphic Chicken. Endocrinology 2018; 159:3492-3502. [PMID: 30124802 DOI: 10.1210/en.2018-00553] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/08/2018] [Accepted: 08/10/2018] [Indexed: 02/08/2023]
Abstract
Birds have a ZZ male and ZW female sex chromosome system. The relative roles of genetics and hormones in regulating avian sexual development have been revealed by studies on gynandromorphs. Gynandromorphs are rare bilateral sex chimeras, male on one side of the body and female on the other. We examined a naturally occurring gynandromorphic chicken that was externally male on the right side of the body and female on the left. The bird was diploid but with a mix of ZZ and ZW cells that correlated with the asymmetric sexual phenotype. The male side was 96% ZZ, and the female side was 77% ZZ and 23% ZW. The gonads of this bird at sexual maturity were largely testicular. The right gonad was a testis, with SOX9+ Sertoli cells, DMRT1+ germ cells, and active spermatogenesis. The left gonad was primarily testicular, but with some peripheral aromatase-expressing follicles. The bird had low levels of serum estradiol and high levels of testosterone, as expected for a male. Despite the low percentage of ZW cells on that side, the left side had female sex-linked feathering, smaller muscle mass, smaller leg and spur, and smaller wattle than the male side. This indicates that these sexually dimorphic structures must be at least partly independent of sex steroid effects. Even a small percentage of ZW cells appears sufficient to support female sexual differentiation. Given the lack of chromosome-wide dosage compensation in birds, various sexually dimorphic features may arise due to Z-gene dosage differences between the sexes.
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Affiliation(s)
- Kirsten R Morris
- Commonwealth Scientific and Industrial Research Organisation Health and Biosecurity, Australian Animal Health Laboratory, Geelong, Victoria, Australia
| | - Claire E Hirst
- Department of Anatomy and Developmental Biology, Monash University, Clayton, Victoria, Australia
| | - Andrew T Major
- Commonwealth Scientific and Industrial Research Organisation Health and Biosecurity, Australian Animal Health Laboratory, Geelong, Victoria, Australia
| | - Tariq Ezaz
- Institute for Applied Ecology, University of Canberra, Bruce, Australian Capital Territory, Australia
| | - Mark Ford
- Commonwealth Scientific and Industrial Research Organisation Health and Biosecurity, Australian Animal Health Laboratory, Geelong, Victoria, Australia
| | - Susan Bibby
- 2Bridges Consulting, Bendigo, Victoria, Australia
| | - Tim J Doran
- Commonwealth Scientific and Industrial Research Organisation Health and Biosecurity, Australian Animal Health Laboratory, Geelong, Victoria, Australia
| | - Craig A Smith
- Department of Anatomy and Developmental Biology, Monash University, Clayton, Victoria, Australia
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Caughey SD, Wilson PW, Mukhtar N, Brocklehurst S, Reid A, D'Eath RB, Boswell T, Dunn IC. Sex differences in basal hypothalamic anorectic and orexigenic gene expression and the effect of quantitative and qualitative food restriction. Biol Sex Differ 2018; 9:20. [PMID: 29843787 PMCID: PMC5975468 DOI: 10.1186/s13293-018-0178-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Accepted: 05/07/2018] [Indexed: 12/18/2022] Open
Abstract
Background Research into energy balance and growth has infrequently considered genetic sex, yet there is sexual dimorphism for growth across the animal kingdom. We test the hypothesis that in the chicken, there is a sex difference in arcuate nucleus neuropeptide gene expression, since previous research indicates hypothalamic AGRP expression is correlated with growth potential and that males grow faster than females. Because growth has been heavily selected in some chicken lines, food restriction is necessary to improve reproductive performance and welfare, but this increases hunger. Dietary dilution has been proposed to ameliorate this undesirable effect. We aimed to distinguish the effects of gut fullness from nutritional feedback on hypothalamic gene expression and its interaction with sex. Methods Twelve-week-old male and female fast-growing chickens were either released from restriction and fed ad libitum or a restricted diet plus 15% w/w ispaghula husk, a non-nutritive bulking agent, for 2 days. A control group remained on quantitative restriction. Hypothalamic arcuate nucleus neuropeptides were measured using real-time PCR. To confirm observed sex differences, the experiment was repeated using only ad libitum and restricted fed fast-growing chickens and in a genetically distinct breed of ad libitum fed male and female chickens. Linear mixed models (Genstat 18) were used for statistical analysis with transformation where appropriate. Results There were pronounced sex differences: expression of the orexigenic genes AGRP (P < 0.001) and NPY (P < 0.002) was higher in males of the fast-growing strain. In genetically distinct chickens, males had higher AGRP mRNA (P = 0.002) expression than females, suggesting sex difference was not restricted to a fast-growing strain. AGRP (P < 0.001) expression was significantly decreased in ad libitum fed birds but was high and indistinguishable between birds on a quantitative versus qualitative restricted diet. Inversely, gene expression of the anorectic genes POMC and CART was significantly higher in ad libitum fed birds but no consistent sex differences were observed. Conclusion Expression of orexigenic peptides in the avian hypothalamus are significantly different between sexes. This could be useful starting point of investigating further if AGRP is an indicator of growth potential. Results also demonstrate that gut fill alone does not reduce orexigenic gene expression. Electronic supplementary material The online version of this article (10.1186/s13293-018-0178-6) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- S D Caughey
- The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian, Edinburgh, EH25 9RG, Scotland, UK.
| | - P W Wilson
- The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian, Edinburgh, EH25 9RG, Scotland, UK
| | - N Mukhtar
- The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian, Edinburgh, EH25 9RG, Scotland, UK
| | - S Brocklehurst
- Bioinformatics and Statistics Scotland, Edinburgh, Scotland, UK
| | - A Reid
- The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian, Edinburgh, EH25 9RG, Scotland, UK
| | - R B D'Eath
- Scotland's Rural College, Edinburgh, Scotland, UK
| | - T Boswell
- School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, England, UK
| | - I C Dunn
- The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian, Edinburgh, EH25 9RG, Scotland, UK
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Rivers JW, Houtz JL, Betts MG, Horton BM. No evidence for a link between forest herbicides and offspring sex ratio in a migratory songbird using high-throughput molecular sexing. CONSERVATION PHYSIOLOGY 2017; 5:cox054. [PMID: 28959450 PMCID: PMC5610655 DOI: 10.1093/conphys/cox054] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Revised: 07/26/2017] [Accepted: 09/04/2017] [Indexed: 06/07/2023]
Abstract
Many species that use or require early-successional forest are of conservation concern, including a number of songbirds that have experienced long-term population declines. In this study, our initial goal was to test whether herbicide application intensity was linked to offspring sex ratio in the White-crowned Sparrow (Zonotrichia leucophrys), a species that requires early-successional forest within forested landscapes. However, a rapid and accurate method using direct PCR to sex a large sample of birds (n > 1000 individuals) was unavailable, so our secondary goal was to develop a new approach for rapidly determine offspring sex. We obtained blood samples from sparrow young during the 2013-2014 breeding seasons in regenerating conifer plantations that were treated with one of four treatments (i.e. light, moderate, and intensive herbicide application, or no-spray control). We then optimized a protocol that used a commercially available, direct PCR kit to amplify sex-specific fragments of the CHD (chromo-helicase-DNA-binding) genes directly from whole blood stored in lysis buffer. Using this approach, we found no evidence that offspring sex ratio was linked to herbicide application intensity or to food availability across herbicide treatments. Our molecular sexing technique was 100% accurate when validated on known-sex adults, and 99.9% of our blood samples amplified successfully after being stored in lysis buffer stored for up to 3 years. The application of direct PCR for sexing birds eliminated the need for DNA extraction and substantially reduced sample processing time, cost, and the opportunity for errors during the extraction step. We conclude that forest herbicide application intensity does not influence sparrow offspring sex ratio in our study system, and that our approach provides a rapid, accurate, and tractable method for sexing birds that can facilitate studies that require processing of a large number of samples.
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Affiliation(s)
- James W Rivers
- Department of Forest Ecosystems and Society, Oregon State University, Corvallis, OR 97331, USA
| | - Jennifer L Houtz
- Department of Biology, Millersville University, Millersville, PA 17551, USA
| | - Matthew G Betts
- Forest Biodiversity Research Network, Department of Forest Ecosystems and Society, Oregon State University, Corvallis, OR 97331, USA
| | - Brent M Horton
- Department of Biology, Millersville University, Millersville, PA 17551, USA
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Clayton DF, London SE. Advancing avian behavioral neuroendocrinology through genomics. Front Neuroendocrinol 2014; 35:58-71. [PMID: 24113222 DOI: 10.1016/j.yfrne.2013.09.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/16/2013] [Revised: 09/16/2013] [Accepted: 09/18/2013] [Indexed: 12/14/2022]
Abstract
Genome technologies are transforming all areas of biology, including the study of hormones, brain and behavior. Annotated reference genome assemblies are rapidly being produced for many avian species. Here we briefly review the basic concepts and tools used in genomics. We then consider how these are informing the study of avian behavioral neuroendocrinology, focusing in particular on lessons from the study of songbirds. We discuss the impact of having a complete "parts list" for an organism; the transformational potential of studying large sets of genes at once instead one gene at a time; the growing recognition that environmental and behavioral signals trigger massive shifts in gene expression in the brain; and the prospects for using comparative genomics to uncover the genetic roots of behavioral variation. Throughout, we identify promising new directions for bolstering the application of genomic information to further advance the study of avian brain and behavior.
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Affiliation(s)
- David F Clayton
- Biological & Experimental Psychology Division, School of Biological & Chemical Sciences, Queen Mary University of London, London E1 4NS, UK.
| | - Sarah E London
- Department of Psychology, Institute for Mind and Biology, Committee on Neurobiology, University of Chicago, 940 E 57th Street, Chicago, IL, USA.
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Arnold AP. The end of gonad-centric sex determination in mammals. Trends Genet 2012; 28:55-61. [PMID: 22078126 PMCID: PMC3268825 DOI: 10.1016/j.tig.2011.10.004] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2011] [Revised: 10/16/2011] [Accepted: 10/17/2011] [Indexed: 01/18/2023]
Abstract
The 20th-century theory of mammalian sex determination states that the embryo is sexually indifferent until the differentiation of gonads, after which sex differences in phenotype are caused by the differential effects of gonadal hormones. However, this theory is inadequate because some sex differences precede differentiation of the gonads and/or are determined by non-gonadal effects of the sexual inequality in the number and type of sex chromosomes. In this article, I propose a general theory of sex determination, which recognizes multiple parallel primary sex-determining pathways initiated by genes or factors encoded by the sex chromosomes. The separate sex-specific pathways interact to synergize with or antagonize each other, enhancing or reducing sex differences in phenotype.
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Affiliation(s)
- Arthur P Arnold
- Department of Integrative Biology & Physiology, Laboratory of Neuroendocrinology of the Brain Research Institute, University of California, Los Angeles, CA 90095-7239, USA.
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