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Pagli C, Chamizo S, Migliore G, Rugnini L, De Giudici G, Braglia R, Canini A, Cantón Y. Isolation of biocrust cyanobacteria and evaluation of Cu, Pb, and Zn immobilisation potential for soil restoration and sustainable agriculture. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 946:174020. [PMID: 38897475 DOI: 10.1016/j.scitotenv.2024.174020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2024] [Revised: 04/30/2024] [Accepted: 06/13/2024] [Indexed: 06/21/2024]
Abstract
Soil contamination by heavy metals represents an important environmental and public health problem of global concern. Biocrust-forming cyanobacteria offer promise for heavy metal immobilisation in contaminated soils due to their unique characteristics, including their ability to grow in contaminated soils and produce exopolysaccharides (EPS). However, limited research has analysed the representativeness of cyanobacteria in metal-contaminated soils. Additionally, there is a lack of studies examining how cyanobacteria adaptation to specific environments can impact their metal-binding capacity. To address this research gap, we conducted a study analysing the bacterial communities of cyanobacteria-dominated biocrusts in a contaminated area from South Sardinia (Italy). Additionally, by using two distinct approaches, we isolated three Nostoc commune strains from cyanobacteria-dominated biocrust and we also evaluated their potential to immobilise heavy metals. The first isolation method involved acclimatizing biocrust samples in liquid medium while, in the second method, biocrust samples were directly seeded onto agar plates. The microbial community analysis revealed Cyanobacteria, Bacteroidota, Proteobacteria, and Actinobacteria as the predominant groups, with cyanobacteria representing between 13.3 % and 26.0 % of the total community. Despite belonging to the same species, these strains exhibited different growth rates (1.1-2.2 g L-1 of biomass) and capacities for EPS production (400-1786 mg L-1). The three strains demonstrated a notable ability for metal immobilisation, removing up to 88.9 % of Cu, 86.2 % of Pb, and 45.3 % of Zn from liquid medium. Cyanobacteria EPS production showed a strong correlation with the removal of Cu, indicating its role in facilitating metal immobilisation. Furthermore, differences in Pb immobilisation (40-86.2 %) suggest possible environmental adaptation mechanisms of the strains. This study highlights the promising application of N. commune strains for metal immobilisation in soils, offering a potential bioremediation tool to combat the adverse effects of soil contamination and promote environmental sustainability.
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Affiliation(s)
- Carlotta Pagli
- Department of Biology, University of Rome Tor Vergata, Italy; Department of Agronomy, University of Almería, Spain; PhD Program in Evolutionary Biology and Ecology, University of Rome Tor Vergata, Italy.
| | - Sonia Chamizo
- Department of Agronomy, University of Almería, Spain; Department of Desertification and Geo-Ecology, Experimental Station of Arid Zones (EEZA-CSIC), Almería, Spain
| | - Giada Migliore
- ENEA, Territorial and Production Systems Sustainability Department, Italy
| | - Lorenza Rugnini
- Department of Biology, University of Rome Tor Vergata, Italy
| | - Giovanni De Giudici
- Department of Chemical and Geological Sciences, University of Cagliari, Italy
| | - Roberto Braglia
- Department of Biology, University of Rome Tor Vergata, Italy
| | | | - Yolanda Cantón
- Department of Agronomy, University of Almería, Spain; Center for Research on Scientific Collections of the University of Almeria (CECOUAL), Spain
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Namli A, Akca MO, Perendeci NA, Yilmaz V, Ertit Tastan B. Effect of pretreated and anaerobically digested microalgae on the chemical and biochemical properties of soil and wheat grown on fluvisol. ENVIRONMENTAL TECHNOLOGY 2024; 45:2833-2846. [PMID: 36919910 DOI: 10.1080/09593330.2023.2192364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 02/13/2023] [Indexed: 06/18/2023]
Abstract
In this study, the effects of the potential application of digestate as an agricultural fertiliser obtained from anaerobically digested microalgae treated by three pretreatment methods, namely alkaline hydrogen peroxide (AHP), high temperature and pressure (HTP), and hydrodynamic cavitation (HC) on some properties of soil, and wheat growth and yield were investigated. For this purpose, pretreated and anaerobically digested microalgae digestates alone or together with diammonium phosphate (DAP) as a chemical fertiliser were applied to soil for wheat growth. The highest dosage of AHP pretreated digestate combined with a half dose of DAP applied to soil was rich in nutrients as 0.25%N and 7.19 mg kg-1 compared to all groups. The properties of the soils were enhanced by applying the highest dosage (0.06 g kg-1) of microalgae digestate combined with a half dose of DAP. 0.02 g kg-1 dosage of HC pretreated digestate combined with a half dose of DAP also greatly improved nitrogen use efficiency indices by up to 104%. The soils' enzyme activities increased in wheat growth experiments by applying either raw or pretreated microalgae digestates. The soils' β-glycosidase, alkaline phosphatase, and urease enzyme activities increased to 1.38 mg pNP g-1 soil, 4.91 mg pNP g-1 soil, and 2.27 mg NH4-N 100 g-1 soil respectively by the application of highest dosage of HC pretreated digestate. The digestates did not have a toxic effect on wheat growth, it was determined that applied pretreatment processes did not cause significant changes in wheat plant height or wet and dry weight.
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Affiliation(s)
- Ayten Namli
- Faculty of Agriculture, Department of Soil Science and Plant Nutrition, Ankara University, Ankara, Turkey
| | - Muhittin Onur Akca
- Faculty of Agriculture, Department of Soil Science and Plant Nutrition, Ankara University, Ankara, Turkey
| | - Nuriye Altinay Perendeci
- Engineering Faculty, Department of Environmental Engineering, Akdeniz University, Antalya, Turkey
| | - Vedat Yilmaz
- Engineering Faculty, Department of Environmental Engineering, Artvin Çoruh University, Artvin, Turkey
| | - Burcu Ertit Tastan
- Health Services Vocational School, Gazi University, Ankara, Turkey
- Life Sciences Application and Research Center, Gazi University, Ankara, Turkey
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Nawaz T, Gu L, Fahad S, Saud S, Bleakley B, Zhou R. Exploring Sustainable Agriculture with Nitrogen-Fixing Cyanobacteria and Nanotechnology. Molecules 2024; 29:2534. [PMID: 38893411 PMCID: PMC11173783 DOI: 10.3390/molecules29112534] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 04/23/2024] [Accepted: 04/24/2024] [Indexed: 06/21/2024] Open
Abstract
The symbiotic relationship between nitrogen-fixing cyanobacteria and plants offers a promising avenue for sustainable agricultural practices and environmental remediation. This review paper explores the molecular interactions between nitrogen-fixing cyanobacteria and nanoparticles, shedding light on their potential synergies in agricultural nanotechnology. Delving into the evolutionary history and specialized adaptations of cyanobacteria, this paper highlights their pivotal role in fixing atmospheric nitrogen, which is crucial for ecosystem productivity. The review discusses the unique characteristics of metal nanoparticles and their emerging applications in agriculture, including improved nutrient delivery, stress tolerance, and disease resistance. It delves into the complex mechanisms of nanoparticle entry into plant cells, intracellular transport, and localization, uncovering the impact on root-shoot translocation and systemic distribution. Furthermore, the paper elucidates cellular responses to nanoparticle exposure, emphasizing oxidative stress, signaling pathways, and enhanced nutrient uptake. The potential of metal nanoparticles as carriers of essential nutrients and their implications for nutrient-use efficiency and crop yield are also explored. Insights into the modulation of plant stress responses, disease resistance, and phytoremediation strategies demonstrate the multifaceted benefits of nanoparticles in agriculture. Current trends, prospects, and challenges in agricultural nanotechnology are discussed, underscoring the need for responsible and safe nanoparticle utilization. By harnessing the power of nitrogen-fixing cyanobacteria and leveraging the unique attributes of nanoparticles, this review paves the way for innovative, sustainable, and efficient agricultural practices.
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Affiliation(s)
- Taufiq Nawaz
- Department of Biology/Microbiology, South Dakota State University, Brookings, SD 57007, USA
| | - Liping Gu
- Department of Biology/Microbiology, South Dakota State University, Brookings, SD 57007, USA
| | - Shah Fahad
- Department of Biology/Microbiology, South Dakota State University, Brookings, SD 57007, USA
- Department of Agronomy, Abdul Wali Khan University Mardan, Mardan 23200, KP, Pakistan
| | - Shah Saud
- College of Life Science, Linyi University, Linyi 276000, China
| | - Bruce Bleakley
- Department of Biology/Microbiology, South Dakota State University, Brookings, SD 57007, USA
| | - Ruanbao Zhou
- Department of Biology/Microbiology, South Dakota State University, Brookings, SD 57007, USA
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Gevin M, Latifi A, Talla E. The modular architecture of sigma factors in cyanobacteria: a framework to assess their diversity and understand their evolution. BMC Genomics 2024; 25:512. [PMID: 38783209 PMCID: PMC11119718 DOI: 10.1186/s12864-024-10415-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Accepted: 05/15/2024] [Indexed: 05/25/2024] Open
Abstract
BACKGROUND Bacterial RNA polymerase holoenzyme requires sigma70 factors to start transcription by identifying promoter elements. Cyanobacteria possess multiple sigma70 factors to adapt to a wide variety of ecological niches. These factors are grouped into two categories: primary sigma factor initiates transcription of housekeeping genes during normal growth conditions, while alternative sigma factors initiate transcription of specific genes under particular conditions. However, the present classification does not consider the modular organization of their structural domains, introducing therefore multiple functional and structural biases. A comprehensive analysis of this protein family in cyanobacteria is needed to address these limitations. RESULTS We investigated the structure and evolution of sigma70 factors in cyanobacteria, analyzing their modular architecture and variation among unicellular, filamentous, and heterocyst-forming morphotypes. 4,193 sigma70 homologs were found with 59 distinct modular patterns, including six essential and 29 accessory domains, such as DUF6596. 90% of cyanobacteria typically have 5 to 17 sigma70 homologs and this number likely depends on the strain morphotype, the taxonomic order and the genome size. We classified sigma70 factors into 12 clans and 36 families. According to taxonomic orders and phenotypic traits, the number of homologs within the 14 main families was variable, with the A.1 family including the primary sigma factor since this family was found in all cyanobacterial species. The A.1, A.5, C.1, E.1, J.1, and K.1 families were found to be key sigma families that distinguish heterocyst-forming strains. To explain the diversification and evolution of sigma70, we propose an evolutionary scenario rooted in the diversification of a common ancestor of the A1 family. This scenario is characterized by evolutionary events including domain losses, gains, insertions, and modifications. The high occurrence of the DUF6596 domain in bacterial sigma70 proteins, and its association with the highest prevalence observed in Actinobacteria, suggests that this domain might be important for sigma70 function. It also implies that the domain could have emerged in Actinobacteria and been transferred through horizontal gene transfer. CONCLUSION Our analysis provides detailed insights into the modular domain architecture of sigma70, introducing a novel robust classification. It also proposes an evolutionary scenario explaining their diversity across different taxonomical orders.
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Affiliation(s)
- Marine Gevin
- Aix Marseille Univ, CNRS, Laboratoire de Chimie Bactérienne, LCB, IMM, Marseille, France
| | - Amel Latifi
- Aix Marseille Univ, CNRS, Laboratoire de Chimie Bactérienne, LCB, IMM, Marseille, France.
| | - Emmanuel Talla
- Aix Marseille Univ, CNRS, Laboratoire de Chimie Bactérienne, LCB, IMM, Marseille, France.
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Jiménez-Ríos L, Torrado A, González-Pimentel JL, Iniesta-Pallarés M, Molina-Heredia FP, Mariscal V, Álvarez C. Emerging nitrogen-fixing cyanobacteria for sustainable cotton cultivation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 924:171533. [PMID: 38458446 DOI: 10.1016/j.scitotenv.2024.171533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 03/04/2024] [Accepted: 03/04/2024] [Indexed: 03/10/2024]
Abstract
Amid growing environmental concerns and the imperative for sustainable agricultural practices, this study examines the potential of nitrogen-fixing cyanobacteria as biofertilizers, particularly in cotton cultivation. The reliance on synthetic nitrogen fertilizers (SNFs), prevalent in modern agriculture, poses significant environmental challenges, including greenhouse gas emissions and water system contamination. This research aims to shift this paradigm by exploring the capacity of cyanobacteria as a natural and sustainable alternative. Utilizing advanced metabarcoding methods to analyze the 16S rRNA gene, we conducted a comprehensive assessment of soil bacterial communities within cotton fields. This study focused on evaluating the diversity, structure, taxonomic composition, and potential functional characteristics of these communities. Emphasis was placed on the isolation of native N2-fixing cyanobacteria strains rom cotton soils, and their subsequent effects on cotton growth. Results from our study demonstrate significant plant growth-promoting (PGP) activities, measured as N2 fixation, production of Phytohormones, Fe solubilization and biofertilization potential of five isolated cyanobacterial strains, underscoring their efficacy in cotton. These findings suggest a viable pathway for replacing chemical-synthetic nitrogen fertilizers with natural, organic alternatives. The reintegration of these beneficial species into agricultural ecosystems can enhance crop growth while fostering a balanced microbial environment, thus contributing to the broader goals of global sustainable agriculture.
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Affiliation(s)
- Lucía Jiménez-Ríos
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Alejandro Torrado
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - José Luis González-Pimentel
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Macarena Iniesta-Pallarés
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Fernando P Molina-Heredia
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Vicente Mariscal
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain.
| | - Consolación Álvarez
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain.
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Akbar WA, Rahim HU, Rutigliano FA. Microbial- and seaweed-based biopolymers: Sources, extractions and implications for soil quality improvement and environmental sustainability - A review. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 359:120964. [PMID: 38692027 DOI: 10.1016/j.jenvman.2024.120964] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Revised: 03/10/2024] [Accepted: 04/19/2024] [Indexed: 05/03/2024]
Abstract
Improving soil quality without creating any environmental problems is an unescapable goal of sustainable agroecosystem management, according to the United Nations 2030 Agenda for Sustainable Development. Therefore, sustainable solutions are in high demand. One of these is the use of biopolymers derived from microbes and seaweed. This paper aims to provide an overview of the sources of extraction and use of microbial (bacteria and cyanobacteria) and seaweed-based biopolymers as soil conditioners, the characteristics of biopolymer-treated soils, and their environmental concerns. A preliminary search was also carried out on the entire Scopus database on biopolymers to find out how much attention has been paid to biopolymers as biofertilizers compared to other applications of these molecules until now. Several soil quality indicators were evaluated, including soil moisture, color, structure, porosity, bulk density, temperature, aggregate stability, nutrient availability, organic matter, and microbial activity. The mechanisms involved in improving soil quality were also discussed.
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Affiliation(s)
- Waqas Ali Akbar
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania Luigi Vanvitelli, via Vivaldi, n. 43, 81100, Caserta, Italy.
| | - Hafeez Ur Rahim
- Department of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Italy
| | - Flora Angela Rutigliano
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania Luigi Vanvitelli, via Vivaldi, n. 43, 81100, Caserta, Italy
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Amin N, Singh VK, Kannaujiya VK. Mycosporine-Like Amino Acids as a Potential Inhibitor of Tyrosinase-Related Protein 1: Computational Screening, Pharmacokinetics, and Molecular Dynamics Simulation. Mol Biotechnol 2024:10.1007/s12033-024-01153-2. [PMID: 38652428 DOI: 10.1007/s12033-024-01153-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Accepted: 03/24/2024] [Indexed: 04/25/2024]
Abstract
Melanin is the major pigment responsible for the coloring of mammalian skin, hair, and eyes to defend against ultraviolet radiation. However, excessive melanin production has resulted in numerous types of hyperpigmentation disorders. Tyrosinase-related protein 1 (TYRP1) is a transmembrane glycoprotein enzyme found in many organisms, including humans, that plays an important role in melanogenesis. Thus, controlling the enzyme activity of TYRP1 with tyrosinase inhibitors is a vital step in the treatment of hyperpigmentation problems in humans. In the present investigation, virtual screening, pharmacokinetics, drug docking, and molecular dynamics (MD) simulation were used to find the most potent drug as an inhibitor of TYRP1 to effectively treat hyperpigmentation disorder. The 3D structure of TYRP1 was retrieved from the Protein Data Bank (PDB) database (PDB ID: 5M8M) and validated by the Ramachandran plot. Pharmacokinetics and drug-likeness showed that mycosporine 2 glycine (M2G) and shinorine (SHI) were the best compounds over other ligands in the same (P-1) structural pose. However, MD simulations of the M2G showed the highest CDOCKER interaction energy (-45.182 kcal/mol) and binding affinity (-65.0529 kcal/mol) as compared to SHI and reference drugs. The molecular binding modes RMSD and RMSF plots have exhibited more relevance to the M2G ligand in comparison to other drug ligands. The bioactivity and ligand efficiency profiles revealed that M2G is the most effective compound as a TYRP1 inhibitor. Thus, M2G could be used as a most effective drug for developing valuable sunscreen products to cure hyperpigmentation-related diseases.
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Affiliation(s)
- Nasreen Amin
- Department of Botany, MMV, Banaras Hindu University, Varanasi, 221005, India
| | - Vinay K Singh
- Centre for Bioinformatics, School of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Vinod K Kannaujiya
- Department of Botany, MMV, Banaras Hindu University, Varanasi, 221005, India.
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Malik HA, Minhas LA, Hassan MW, Kaleem M, Aslam F, Mumtaz AS. Anabaena sp. A-1 mediated molybdenum oxide nanoparticles: A novel frontier in green synthesis, characterization and pharmaceutical properties. Microsc Res Tech 2024. [PMID: 38623764 DOI: 10.1002/jemt.24572] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 03/25/2024] [Accepted: 04/04/2024] [Indexed: 04/17/2024]
Abstract
Green-synthesized metal oxide nanoparticles have garnered considerable attention due to their simple, sustainable, and eco-friendly attributes, coupled with their diverse applications in biomedicine and environmental context. The current study shows a sustainable approach for synthesizing molybdenum oxide nanoparticles (MoONPs) utilizing an extract from Anabaena sp. A-1. This novel approach marks a significant milestone as various spectral approaches were employed for characterization of the green-synthesized MoONPs. Ultraviolet-visible (UV-Vis) spectroscopic analysis revealed a surface plasmon resonance (SPR) peak of MoONPs at 538 nm. Fourier transform infrared (FTIR) spectral analysis facilitated the identification of functional groups responsible for both the stability and production of MoONPs. Scanning electron microscopy (SEM) was utilized revealing a rod shape morphology of the MoONPs. X-ray diffraction (XRD) analysis yielded a calculated crystal size of 31 nm, indicating the crystalline nature of MoONPs. Subsequently, biological assays were employed to ascertain the potential of the bioengineered MoONPs. The 2,2-diphenyl-1-picrylhydrazyl (DPPH) assay was used to quantify free radical scavenging activity, revealing an antioxidant capacity of 68.1% at 200 μg/mL. To evaluate antibacterial and antifungal efficacy, the disc diffusion method was employed across varying concentrations of MoONPs (6.25, 12.5, 25, 50, 100, 150, 200 μg/mL). Quantification of cytotoxicity was performed via a brine shrimp assay, yielding an IC50 value of 552.3 μg/mL, a metric of moderate cytotoxicity. To assess the biocompatibility of MoONPs, an antihemolytic assay was conducted, confirming their safety profile. Additionally, MoONPs exhibited non-toxic attributes in an insecticidal assay. Notably, in anti-inflammatory assay MoONPs showed an inactive nature towards the reactive oxygen species. In conclusion, these findings highlight the potential versatility of MoONPs in various biological applications, extending beyond their recognized anti-inflammatory and insecticidal properties. RESEARCH HIGHLIGHTS: This study marks an advancement in nanotechnology, exploring ways for MoONPs fabrication, representing a unique and unexplored research domain. Green-synthesized MoONPs using Anabaena sp. A-1 extract offers a sustainable and eco-friendly approach. Characterized by UV-Vis, FTIR, SEM, and XRD, MoONPs demonstrate rod-shaped morphology and crystalline nature. Bioengineered MoONPs exhibit versatility in biological applications, demonstrating notable antioxidant, antibacterial and antifungal efficacy, moderate cytotoxicity, biocompatibility, and insecticidal properties, emphasizing their multifaceted utility. The research findings highlight the potential utilization of MoONPs across a spectrum of biological applications, thereby suggesting their promising role in the realm of biomedicine and environmental context.
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Affiliation(s)
- Hafiza Aliya Malik
- Department of Plant Sciences, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Lubna Anjum Minhas
- Department of Plant Sciences, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Muhammad Waqar Hassan
- Department of Computer Sciences, Charles Sturt University, Darlinghurst Campus, Sydney, New South Wales, Australia
| | - Muhammad Kaleem
- Department of Plant Sciences, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Faiqa Aslam
- Department of Plant Sciences, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Abdul Samad Mumtaz
- Department of Plant Sciences, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan
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Nayeem J, Dey P, Dey SK, Karim R, Ayoun M, Tuser AH, Zemi NZ, Khatoon H. Dataset representing growth performance, nutritional assay and biochemical profile of Oscillatoria spp. Data Brief 2024; 53:110255. [PMID: 38533122 PMCID: PMC10964075 DOI: 10.1016/j.dib.2024.110255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 02/21/2024] [Indexed: 03/28/2024] Open
Abstract
Cyanobacteria are regarded as vital constituents of aquatic ecosystems which recently become viable option for bioremediation since it can remove contaminants from polluted water. They possess intriguing metabolic properties and exhibit differential growth patterns. This study elucidates the isolation and identification of two marine and two freshwater indigenous Oscillatoria spp., their growth performance, nutritional composition along with intricate biochemical profiles. Agar streak plate method was used for the isolation, growth curve was determined through chlorophyll content and optical density. Freshwater and marine Oscillatoria spp. were mass cultured in commercial Bold Basal Media and Conway media respectively. Wet biomass was harvested through centrifugation at the early stationary phase of their respective growth curve and oven-dried at 40 °C to determine the nutritional and biochemical profiles. Oscillatoria sp. 2 displayed significantly higher (p ˂ 0.05) chlorophyll-a (22.72 ± 0.04 µg/mL) and OD value (1.87 ± 0.03) in the stationary phase (9th to 11th day) than the other species. Crude protein contents (%) varied from 21.56 ± 0.09 to 56.97 ± 0.03. Crude lipid (%) ranged from 9.07 ± 0.07 to 17.13 ± 0.13 and Crude fiber content (%) showed the range from 7.49 ± 0.15 to 17.04 ± 0.08. Fatty acid and amino acid were also found variable among the species. Present study will contribute to the meticulous selection and characterization of Oscillatoria sp. to utilize it in the rigorous scientific investigations and diverse commercial applications.
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Affiliation(s)
- Jannatul Nayeem
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
| | - Proma Dey
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
| | - Sumit Kanti Dey
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
| | - Rezaul Karim
- Institute of Technology Transfer and Innovation, Bangladesh Council of Scientific and Industrial Research, Dr Qudrate-I-Khuda Road, Dhaka 1205, Bangladesh
| | - Mohammed Ayoun
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
| | - Abed Hasan Tuser
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
| | - Nusrat Zaman Zemi
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
| | - Helena Khatoon
- Department of Aquaculture, Chattogram Veterinary and Animal Sciences University, Chattogram 4225, Bangladesh
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Debnath S, Muthuraj M, Bandyopadhyay TK, Bobby MN, Vanitha K, Tiwari ON, Bhunia B. Engineering strategies and applications of cyanobacterial exopolysaccharides: A review on past achievements and recent perspectives. Carbohydr Polym 2024; 328:121686. [PMID: 38220318 DOI: 10.1016/j.carbpol.2023.121686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 11/08/2023] [Accepted: 12/08/2023] [Indexed: 01/16/2024]
Abstract
Cyanobacteria are ideally suited for developing sustainable biological products but are underdeveloped due to a lack of genetic tools. Exopolysaccharide (EPS) is one of the essential bioproducts with widespread industrial applications. Despite their unique structural characteristics associated with distinct biological and physicochemical aspects, EPS from cyanobacteria has been underexplored. However, it is expected to accelerate in the near future due to the utilization of low-cost cyanobacterial platforms and readily available information on the structural data and specific features of these biopolymers. In recent years, cyanobacterial EPSs have attracted growing scientific attention due to their simple renewability, rheological characteristics, massive production, and potential uses in several biotechnology domains. This review focuses on the most recent research on potential new EPS producers and their distinct compositions responsible for novel biological activities. Additionally, nutritional and process parameters discovered recently for enhancing EPS production and engineering strategies applied currently to control the biosynthetic pathway for enhanced EPS production are critically highlighted. The process intensification of previously developed EPS extraction and purification processes from cyanobacterial biomass is also extensively explained. Furthermore, the newly reported biotechnological applications of cyanobacterial exopolysaccharides are also discussed.
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Affiliation(s)
- Shubhankar Debnath
- Bioproducts Processing Research Laboratory (BPRL), Department of Bio Engineering, National Institute of Technology, Agartala 799046, India
| | - Muthusivaramapandian Muthuraj
- Bioproducts Processing Research Laboratory (BPRL), Department of Bio Engineering, National Institute of Technology, Agartala 799046, India.
| | | | - Md Nazneen Bobby
- Department of Biotechnology, Vignan's Foundation for Science Technology and Research, Guntur 522213, Andhra Pradesh, India
| | - Kondi Vanitha
- Department of Pharmaceutics, Vishnu Institute of Pharmaceutical Education and Research, Narsapur, Medak, Telangana, India
| | - Onkar Nath Tiwari
- Centre for Conservation and Utilization of Blue Green Algae, Division of Microbiology, Indian Agricultural Research Institute (ICAR), New Delhi 110012, India.
| | - Biswanath Bhunia
- Bioproducts Processing Research Laboratory (BPRL), Department of Bio Engineering, National Institute of Technology, Agartala 799046, India.
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Fang M, LiWang A, Golden SS, Partch CL. The inner workings of an ancient biological clock. Trends Biochem Sci 2024; 49:236-246. [PMID: 38185606 PMCID: PMC10939747 DOI: 10.1016/j.tibs.2023.12.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2023] [Revised: 11/30/2023] [Accepted: 12/15/2023] [Indexed: 01/09/2024]
Abstract
Circadian clocks evolved in diverse organisms as an adaptation to the daily swings in ambient light and temperature that derive from Earth's rotation. These timing systems, based on intracellular molecular oscillations, synchronize organisms' behavior and physiology with the 24-h environmental rhythm. The cyanobacterial clock serves as a special model for understanding circadian rhythms because it can be fully reconstituted in vitro. This review summarizes recent advances that leverage new biochemical, biophysical, and mathematical approaches to shed light on the molecular mechanisms of cyanobacterial Kai proteins that support the clock, and their homologues in other bacteria. Many questions remain in circadian biology, and the tools developed for the Kai system will bring us closer to the answers.
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Affiliation(s)
- Mingxu Fang
- Department of Molecular Biology, University of California - San Diego, La Jolla, CA 92093, USA; Center for Circadian Biology, University of California - San Diego, La Jolla, CA 92093, USA
| | - Andy LiWang
- Center for Circadian Biology, University of California - San Diego, La Jolla, CA 92093, USA; Department of Chemistry and Biochemistry, University of California - Merced, Merced, CA 95343, USA; Center for Cellular and Biomolecular Machines, University of California - Merced, Merced, CA 95343, USA
| | - Susan S Golden
- Department of Molecular Biology, University of California - San Diego, La Jolla, CA 92093, USA; Center for Circadian Biology, University of California - San Diego, La Jolla, CA 92093, USA
| | - Carrie L Partch
- Center for Circadian Biology, University of California - San Diego, La Jolla, CA 92093, USA; Department of Chemistry & Biochemistry, University of California - Santa Cruz, Santa Cruz, CA 95064, USA.
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12
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Paul S, Parvez SS, Goswami A, Banik A. Exopolysaccharides from agriculturally important microorganisms: Conferring soil nutrient status and plant health. Int J Biol Macromol 2024; 262:129954. [PMID: 38336329 DOI: 10.1016/j.ijbiomac.2024.129954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 08/10/2023] [Accepted: 02/01/2024] [Indexed: 02/12/2024]
Abstract
A wide variety of microorganisms secretes extracellular polymeric substances or commonly known as exopolysaccharides (EPS), which have been studied to influence plant growth via various mechanisms. EPS-producing microorganisms have been found to have positive effects on plant health such as by facilitating nutrient entrapment in the soil, or by improving soil quality, especially by helping in mitigating various abiotic stress conditions. The various types of microbial polysaccharides allow for the compartmentalization of the microbial community enabling them to endure undressing stress conditions. With the growing population, there is a constant need for developing sustainable agriculture where we could use various PGPR to help the plant cope with various stress conditions and simultaneously enhance the crop yield. These polysaccharides have also found application in various sectors, especially in the biomedical fields, manifesting their potential to act as antitumor drugs, play a significant role in immune evasion, and reveal various therapeutic potentials. These constitute high levels of bioactive polysaccharides which possess a wide range of implementation starting from industrial applications to novel food applications. In this current review, we aim at presenting a comprehensive study of how these microbial extracellular polymeric substances influence agricultural productivity along with their other commercial applications.
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Affiliation(s)
- Sushreeta Paul
- Laboratory of Microbial Interaction, Institute of Health Sciences, Presidency University, Kolkata, West Bengal, India
| | - Sk Soyal Parvez
- Laboratory of Microbial Interaction, Institute of Health Sciences, Presidency University, Kolkata, West Bengal, India
| | - Anusree Goswami
- Laboratory of Microbial Interaction, Institute of Health Sciences, Presidency University, Kolkata, West Bengal, India
| | - Avishek Banik
- Laboratory of Microbial Interaction, Institute of Health Sciences, Presidency University, Kolkata, West Bengal, India.
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13
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Ryu HB, Kang MJ, Choi KM, Yang IK, Hong SJ, Lee CG. Inhibition of Polyphosphate Degradation in Synechocystis sp. PCC6803 through Inactivation of the phoU Gene. J Microbiol Biotechnol 2024; 34:407-414. [PMID: 38247220 PMCID: PMC10940749 DOI: 10.4014/jmb.2311.11046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 12/26/2023] [Accepted: 12/31/2023] [Indexed: 01/23/2024]
Abstract
Phosphorus is an essential but non-renewable nutrient resource critical for agriculture. Luxury phosphorus uptake allows microalgae to synthesize polyphosphate and accumulate phosphorus, but, depending on the strain of algae, polyphosphate may be degraded within 4 hours of accumulation. We studied the recovery of phosphorus from wastewater through luxury uptake by an engineered strain of Synechocystis sp. with inhibited polyphosphate degradation and the effect of this engineered Synechocystis biomass on lettuce growth. First, a strain (ΔphoU) lacking the phoU gene, which encodes a negative regulator of environmental phosphate concentrations, was generated to inhibit polyphosphate degradation in cells. Polyphosphate concentrations in the phoU knock-out strain were maintained for 24 h and then decreased slowly. In contrast, polyphosphate concentrations in the wild-type strain increased up to 4 h and then decreased rapidly. In addition, polyphosphate concentration in the phoU knockout strain cultured in semi-permeable membrane bioreactors with artificial wastewater medium was 2.5 times higher than that in the wild type and decreased to only 16% after 48 h. The biomass of lettuce treated with the phoU knockout strain (0.157 mg P/m2) was 38% higher than that of the lettuce treated with the control group. These results indicate that treating lettuce with this microalgal biomass can be beneficial to crop growth. These results suggest that the use of polyphosphate-accumulating microalgae as biofertilizers may alleviate the effects of a diminishing phosphorous supply. These findings can be used as a basis for additional genetic engineering to increase intracellular polyphosphate levels.
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Affiliation(s)
- Han-bin Ryu
- Department of Biological Engineering, Inha University, Incheon 22212, Republic of Korea
- Industry-Academia Interactive R&E Center for Bioprocess Innovation, Inha University, Incheon 22212, Republic of Korea
| | - Mi-Jin Kang
- Department of Biological Engineering, Inha University, Incheon 22212, Republic of Korea
| | - Kyung-Min Choi
- Department of Biological Engineering, Inha University, Incheon 22212, Republic of Korea
| | - Il-Kyu Yang
- Department of Biological Engineering, Inha University, Incheon 22212, Republic of Korea
- Industry-Academia Interactive R&E Center for Bioprocess Innovation, Inha University, Incheon 22212, Republic of Korea
| | - Seong-Joo Hong
- Department of Biological Engineering, Inha University, Incheon 22212, Republic of Korea
- Industry-Academia Interactive R&E Center for Bioprocess Innovation, Inha University, Incheon 22212, Republic of Korea
| | - Choul-Gyun Lee
- Department of Biological Engineering, Inha University, Incheon 22212, Republic of Korea
- Industry-Academia Interactive R&E Center for Bioprocess Innovation, Inha University, Incheon 22212, Republic of Korea
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14
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Cao X, Cai R, Zuo S, Niu D, Yang F, Xu C. Enhanced lignin degradation by Irpex lacteus through expanded sterilization further improved the fermentation quality and microbial community during the silage preservation process. BIORESOUR BIOPROCESS 2024; 11:14. [PMID: 38647879 PMCID: PMC10992542 DOI: 10.1186/s40643-024-00730-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Accepted: 01/10/2024] [Indexed: 04/25/2024] Open
Abstract
Traditional autoclaving, slow degradation rate and preservation of biomass treated by fungi are the main factors restricting biological treatment. In our previous studies, strains with high efficiency and selective lignin degradation ability were obtained. To further solve the limiting factors of biological treatment, this paper proposed a composite treatment technology, which could replace autoclaves for fungal treatment and improve the preservation and utilization of fungal-pretreated straw. The autoclaved and expanded buckwheat straw were, respectively, degraded by Irpex lacteus for 14 days (CIL, EIL), followed by ensiling of raw materials (CK) and biodegraded straw of CIL and EIL samples with Lactobacillus plantarum for different days, respectively (CP, CIP, EIP). An expansion led to lactic acid bacteria, mold, and yeast of the samples below the detection line, and aerobic bacteria was significantly reduced, indicating a positive sterilization effect. Expansion before I. lacteus significantly enhanced lignin selective degradation by about 6%, and the absolute content of natural detergent solute was about 5% higher than that of the CIL. Moreover, EIL decreased pH by producing higher organic acids. The combination treatment created favorable conditions for ensiling. During ensiling, EIP silage produced high lactic acid about 26.83 g/kg DM and the highest acetic acid about 22.35 g/kg DM, and the pH value could be stable at 4.50. Expansion before I. lacteus optimized the microbial community for ensiling, resulting in EIP silage co-dominated by Lactobacillus, Pediococcus and Weissella, whereas only Lactobacillus was always dominant in CP and CIP silage. Clavispora gradually replaced Irpex in EIP silage, which potentially promoted lactic acid bacteria growth and acetic acid production. In vitro gas production (IVGP) in EIL was increased by 30% relative to CK and was higher than 24% in CIL. The role of expansion was more significant after ensiling, the IVGP in EIP was increased by 22% relative to CP, while that in CIP silage was only increased by 9%. Silage of fungal-treated samples reduced methane emissions by 28% to 31%. The study demonstrated that expansion provides advantages for fungal colonization and delignification, and further improves the microbial community and fermentation quality for silage, enhancing the nutrition and utilization value. This has practical application value for scaling up biological treatment and preserving the fungal-treated lignocellulose.
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Affiliation(s)
- Xiaohui Cao
- College of Engineering, China Agricultural University, (East Campus), 17 Qing-Hua-Dong-Lu, Haidian District, Beijing, 100083, People's Republic of China
| | - Rui Cai
- School of Environmental Science and Engineering, Huazhong University of Science and Technology, Wuhan, 430074, Hubei Province, China
| | - Sasa Zuo
- College of Engineering, China Agricultural University, (East Campus), 17 Qing-Hua-Dong-Lu, Haidian District, Beijing, 100083, People's Republic of China
| | - Dongze Niu
- Changzhou Key Laboratory of Biomass Green, Safe and High Value Utilization Technology, Institute of Urban and Rural Mining, Changzhou University, Changzhou, 213164, China
| | - Fuyu Yang
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100093, People's Republic of China
| | - Chuncheng Xu
- College of Engineering, China Agricultural University, (East Campus), 17 Qing-Hua-Dong-Lu, Haidian District, Beijing, 100083, People's Republic of China.
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15
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Zhang C, Yu X, Laipan M, Wei T, Guo J. Soil health improvement by inoculation of indigenous microalgae in saline soil. ENVIRONMENTAL GEOCHEMISTRY AND HEALTH 2024; 46:23. [PMID: 38225518 DOI: 10.1007/s10653-023-01790-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Accepted: 10/16/2023] [Indexed: 01/17/2024]
Abstract
Using biological methods to improve saline soils is recognized as an eco-friendly and sustainable way. In this study, two indigenous algae YJ-1 and YJ-2 screened from salinized farmland were inoculated into saline soils with different salinization levels to investigate their potential in enhancing soil health by laboratory microcosm experiment. The results showed that individual inoculation of the two algae quickly resulted in the formation of algal crusts, and the chlorophyll content in the saline soils gradually increased with the incubation time. The soil pH decreased significantly from the initial 8.15-9.45 to 6.97-7.56 after 60-day incubation. The exopolysaccharides secretion and the activities of catalase, sucrase, and urease in saline soils also increased. Microalgal inoculation increased soil organic matter storage, while decreasing the available nutrient contents possibly due to the depletion of microalgal growth. PCA and PCC results identified that microalgal biomass as the predominant variable affecting soil quality. Overall, these data revealed the great potential of microalgae in the amelioration of saline soils, especially in pH reduction and enzyme activity enhancement. This study will provide the theoretical foundation for improving saline soils via algalization.
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Affiliation(s)
- Chao Zhang
- School of Environmental Science and Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, People's Republic of China.
| | - Xianwei Yu
- School of Environmental Science and Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, People's Republic of China
| | - Minwang Laipan
- School of Environmental Science and Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, People's Republic of China
| | - Ting Wei
- School of Environmental Science and Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, People's Republic of China
| | - Junkang Guo
- School of Environmental Science and Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, People's Republic of China
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16
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Upadhyay PK, Dey A, Singh VK, Dwivedi BS, Singh RK, Rajanna GA, Babu S, Rathore SS, Shekhawat K, Rai PK, Choudhury NK, Budhlakoti N, Mishra DC, Rai A, Singh A, Bhardwaj AK, Shukla G. Changes in microbial community structure and yield responses with the use of nano-fertilizers of nitrogen and zinc in wheat-maize system. Sci Rep 2024; 14:1100. [PMID: 38212628 PMCID: PMC10784562 DOI: 10.1038/s41598-023-48951-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 12/01/2023] [Indexed: 01/13/2024] Open
Abstract
The growing popularity of nano-fertilization around the world for enhancing yield and nutrient use efficiency has been realized, however its influence on soil microbial structure is not fully understood. The purpose of carrying out this study was to assess the combined effect of nano and conventional fertilizers on the soil biological indicators and crop yield in a wheat-maize system. The results indicate that the at par grain yield of wheat and maize was obtained with application of 75% of recommended nitrogen (N) with full dose of phosphorus (P) and potassium (K) through conventional fertilizers along with nano-N (nano-urea) or nano-N plus nano-Zn sprays and N100PK i.e. business as usual (recommended dose of fertilizer). Important soil microbial property like microbial biomass carbon was found statistically similar with nano fertilizer-based management (N75PK + nano-N, and N75PK + nano-N + nano-Zn) and conventional management (N100PK), during both wheat and maize seasons. The experimental data indicated that the application of foliar spray of nano-fertilizers along with 75% N as basal is a sustainable nutrient management approach with respect to growth, yield and rhizosphere biological activity. Furthermore, two foliar sprays of nano-N or nano-N + nano-Zn curtailed N requirement by 25%, furthermore enhanced soil microbial diversity and the microbial community structure. The specific microbial groups, including Actinobacteria, Bacteroidia, and Proteobacteria, were present in abundance and were positively correlated with wheat and maize yield and soil microbial biomass carbon. Thus, one of the best nutrient management approaches for sustaining productivity and maintaining sound microbial diversity in wheat-maize rotation is the combined use of nano-fertilizers and conventional fertilizers.
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Affiliation(s)
| | - Abir Dey
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
| | - Vinod Kumar Singh
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India.
- ICAR-Central Research Institute for Dryland Agriculture, Hyderabad, 500 059, India.
| | - Brahma Swaroop Dwivedi
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
- Agricultural Scientist Recruitment Board, New Delhi, 110 012, India
| | - Rajiv Kumar Singh
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
| | - G A Rajanna
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
- ICAR- Directorate of Groundnut Research, Regional Station, Ananthapur, 515 701, India
| | - Subhash Babu
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
| | | | - Kapila Shekhawat
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
| | - Pradeep Kumar Rai
- IFFCO-Nano Fertilizer Plant, Phulpur Unit, Ghiyanagar, Prayagraj, Uttar Pradesh, 212404, India
| | | | - Neeraj Budhlakoti
- ICAR-Indian Agricultural Statistics Research Institute, New Delhi, 110 012, India
| | | | - Anil Rai
- ICAR-Indian Agricultural Statistics Research Institute, New Delhi, 110 012, India
| | - Awtar Singh
- ICAR-Central Soil Salinity Research Institute, Karnal, 132001, India
| | | | - Gaurav Shukla
- ICAR-Indian Agricultural Research Institute, New Delhi, 110 012, India
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17
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Mohanty SS, Mohanty K. Valorization of Chlorella thermophila biomass cultivated in dairy wastewater for biopesticide production against bacterial rice blight: a circular biorefinery approach. BMC PLANT BIOLOGY 2023; 23:644. [PMID: 38097976 PMCID: PMC10722807 DOI: 10.1186/s12870-023-04579-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 11/02/2023] [Indexed: 12/17/2023]
Abstract
Biopesticides offer a sustainable and efficient alternative to synthetic pesticides, providing a safer and more eco-friendly solution to pest management. The present work proposes an innovative approach that integrates crop protection and wastewater treatment using thermophilic microalgal strain Chlorella thermophila (CT) cultivated in nutrient-rich dairy wastewater as a growth medium. The microalgae was cultivated mixotrophically and was able to reduce both organic carbon as well as nutrient load of the dairy wastewater efficiently. The integrated circular biorefinery approach combines biomass cultivation, extraction of biopesticide compounds, and conversion to biocrude. The antimicrobial activity of the biopesticidal extracts against Xanthomonas oryzae and Pantoea agglomerans, the causative agent of bacterial rice blight, is assessed through in vitro studies. The biomass extract obtained is able to inhibit the growth of both the above-mentioned plant pathogens successfully. Mass spectroscopy analysis indicates the presence of Neophytadiene that has previously been reported for the inhibition of several pathogenic bacteria and fungi. Several other value-added products such as linoleic acid and nervonic acids were also been detected in the microalgal biomass which have extremely high nutraceutical and medicinal values. Furthermore, the study investigates the potential for co-production of biocrude from the biorefinery process via hydrothermal liquefaction. Overall, the findings of this present work represent an innovative and sustainable approach that combines wastewater treatment and crop protection using microalgal biomass.
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Affiliation(s)
- Satya Sundar Mohanty
- School of Energy Sciences and Engineering, Indian Institute of Technology Guwahati, Assam, India
- Department of Biotechnology, Karunya Institute of Technology and Sciences, Coimbatore, Tamil Nadu, India
| | - Kaustubha Mohanty
- School of Energy Sciences and Engineering, Indian Institute of Technology Guwahati, Assam, India.
- Department of Chemical Engineering, Indian Institute of Technology Guwahati, Assam, India.
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18
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Haroun M, Xie S, Awadelkareem W, Wang J, Qian X. Influence of biofertilizer on heavy metal bioremediation and enzyme activities in the soil to revealing the potential for sustainable soil restoration. Sci Rep 2023; 13:20684. [PMID: 38001100 PMCID: PMC10673865 DOI: 10.1038/s41598-023-44986-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Accepted: 10/14/2023] [Indexed: 11/26/2023] Open
Abstract
Overuse of chemical fertilizer and pesticides in agricultural activity is frequently damaging to soil health and can accumulate heavy metals in the soil environment, causing harm to plants, humans, and the ecosystem. This study was done to evaluate the effectiveness of biofertilizers in reducing heavy metal levels in contaminated soil and enhancing the activity of soil enzymes that are crucial to plant growth and development. Two bacteria strains, Pseudomonas aeruginosa. and Bacillus firmus, were chosen to develop biofertilizers based on molasses. The pot experiment was setup using a completely randomized design with four treatments and five levels; Bacillus firmus and Pseudomonas aeruginosa were used separately, and they were combined for the biofertilizer dose (20, 40, 60, 80, and 100 mL). Utilizing contaminated soils taken from a greenhouse farm the effect of biofertilizer on heavy metal bioremediation and soil enzyme activity was examined. Methods of soil agrochemical analysis were used to determine the soil physiochemical properties and the concentrations of heavy metals Cu, Fe, Zn, Cd, Mo, Mn, were determined by inductively coupled plasma-mass spectrometry ICP-MS, following DTPA extraction methods. In results, soil pH decreased from 8.28 to 7.39, Ec increased from 0.91 to 1.12, organic matter increased from 18.88 to 20.63 g/kg, N increased gradually from 16.7 to 24.4 mg/kg, and K increased from 145.25 to 201.4 mg/kg. The effect of biofertilizer treatment on soil physiochemical characteristics was significantly positive. Application of biofertilizer significantly increased the heavy metal bioavailability and the activities of soil enzymes. Soil pH were positively correlated with soil Zn (0.99819*), APK (0.95869*) activity and negatively correlated with Fe (0.96759*) also statistically significant at (p < 0.05). The soil Cu positively correlated with Fe (0.99645*), Cd (0.97866*), β.D.GLU (0.99769*) and negatively correlated with PAK (- 0.9624*). Soil ARY had positive correlation with soil Mn (0.99683*), Cd (0.95695*), and negative correlation with PAK (- 0.99424*) at (p < 0.05). Soil enzyme activities were negatively correlated to heavy metals at a significant level. Collectively, the study highlights the potential of biofertilizers as a sustainable and effective approach to enhance soil health and remediate heavy metal-contaminated soils in greenhouses.
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Affiliation(s)
- Mohammed Haroun
- Department of Agriproduct and Environmental Safety, College of Agriculture, Yangzhou University, Yangzhou, 225012, China
- Department of Biotechnology, Africa City of Technology, Khartoum, 11111, Sudan
- Ministry of Agriculture and Rural Affairs, Key Laboratory of Cultivated Land Quality Monitoring and Evaluation, Yangzhou University, Yangzhou, 225127, China
| | - Shifan Xie
- Ministry of Agriculture and Rural Affairs, Key Laboratory of Cultivated Land Quality Monitoring and Evaluation, Yangzhou University, Yangzhou, 225127, China
- Environment Science and Engineering College, Yangzhou University, Yangzhou, 225127, China
| | - Waleed Awadelkareem
- Ministry of Agriculture and Rural Affairs, Key Laboratory of Cultivated Land Quality Monitoring and Evaluation, Yangzhou University, Yangzhou, 225127, China
- Department of Botany, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China
- Department of Soil Science, College of Agriculture, Red Sea University, Port Sudan, 33319, Sudan
| | - Juanjuan Wang
- Ministry of Agriculture and Rural Affairs, Key Laboratory of Cultivated Land Quality Monitoring and Evaluation, Yangzhou University, Yangzhou, 225127, China
- Environment Science and Engineering College, Yangzhou University, Yangzhou, 225127, China
| | - Xiaoqing Qian
- Ministry of Agriculture and Rural Affairs, Key Laboratory of Cultivated Land Quality Monitoring and Evaluation, Yangzhou University, Yangzhou, 225127, China.
- Environment Science and Engineering College, Yangzhou University, Yangzhou, 225127, China.
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19
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Pérez G, Krause SMB, Bodelier PLE, Meima-Franke M, Pitombo L, Irisarri P. Interactions between Cyanobacteria and Methane Processing Microbes Mitigate Methane Emissions from Rice Soils. Microorganisms 2023; 11:2830. [PMID: 38137974 PMCID: PMC10745823 DOI: 10.3390/microorganisms11122830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 11/16/2023] [Accepted: 11/18/2023] [Indexed: 12/24/2023] Open
Abstract
Cyanobacteria play a relevant role in rice soils due to their contribution to soil fertility through nitrogen (N2) fixation and as a promising strategy to mitigate methane (CH4) emissions from these systems. However, information is still limited regarding the mechanisms of cyanobacterial modulation of CH4 cycling in rice soils. Here, we focused on the response of methane cycling microbial communities to inoculation with cyanobacteria in rice soils. We performed a microcosm study comprising rice soil inoculated with either of two cyanobacterial isolates (Calothrix sp. and Nostoc sp.) obtained from a rice paddy. Our results demonstrate that cyanobacterial inoculation reduced CH4 emissions by 20 times. Yet, the effect on CH4 cycling microbes differed for the cyanobacterial strains. Type Ia methanotrophs were stimulated by Calothrix sp. in the surface layer, while Nostoc sp. had the opposite effect. The overall pmoA transcripts of Type Ib methanotrophs were stimulated by Nostoc. Methanogens were not affected in the surface layer, while their abundance was reduced in the sub surface layer by the presence of Nostoc sp. Our results indicate that mitigation of methane emission from rice soils based on cyanobacterial inoculants depends on the proper pairing of cyanobacteria-methanotrophs and their respective traits.
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Affiliation(s)
- Germán Pérez
- Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), 6708 PB Wageningen, The Netherlands or (G.P.); (S.M.B.K.); (M.M.-F.)
- Laboratory of Microbiology, Department of Plant Biology, Agronomy Faculty, University of the Republic, Montevideo 12900, Uruguay;
| | - Sascha M. B. Krause
- Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), 6708 PB Wageningen, The Netherlands or (G.P.); (S.M.B.K.); (M.M.-F.)
- School of Ecology and Environmental Sciences, East China Normal University, Shanghai 200062, China
| | - Paul L. E. Bodelier
- Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), 6708 PB Wageningen, The Netherlands or (G.P.); (S.M.B.K.); (M.M.-F.)
| | - Marion Meima-Franke
- Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), 6708 PB Wageningen, The Netherlands or (G.P.); (S.M.B.K.); (M.M.-F.)
| | - Leonardo Pitombo
- Department of Environmental Sciences, Federal University of São Carlos (UFSCar), São Paulo 18052-780, Brazil;
| | - Pilar Irisarri
- Laboratory of Microbiology, Department of Plant Biology, Agronomy Faculty, University of the Republic, Montevideo 12900, Uruguay;
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20
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Álvarez C, Jiménez-Ríos L, Iniesta-Pallarés M, Jurado-Flores A, Molina-Heredia FP, Ng CKY, Mariscal V. Symbiosis between cyanobacteria and plants: from molecular studies to agronomic applications. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:6145-6157. [PMID: 37422707 PMCID: PMC10575698 DOI: 10.1093/jxb/erad261] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Accepted: 07/06/2023] [Indexed: 07/10/2023]
Abstract
Nitrogen-fixing cyanobacteria from the order Nostocales are able to establish symbiotic relationships with diverse plant species. They are promiscuous symbionts, as the same strain of cyanobacterium is able to form symbiotic biological nitrogen-fixing relationships with different plants species. This review will focus on the different types of cyanobacterial-plant associations, both endophytic and epiphytic, and provide insights from a structural viewpoint, as well as our current understanding of the mechanisms involved in the symbiotic crosstalk. In all these symbioses, the benefit for the plant is clear; it obtains from the cyanobacterium fixed nitrogen and other bioactive compounds, such as phytohormones, polysaccharides, siderophores, or vitamins, leading to enhanced plant growth and productivity. Additionally, there is increasing use of different cyanobacterial species as bio-inoculants for biological nitrogen fixation to improve soil fertility and crop production, thus providing an eco-friendly, alternative, and sustainable approach to reduce the over-reliance on synthetic chemical fertilizers.
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Affiliation(s)
- Consolación Álvarez
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Lucía Jiménez-Ríos
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Macarena Iniesta-Pallarés
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Ana Jurado-Flores
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Fernando P Molina-Heredia
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
| | - Carl K Y Ng
- UCD School of Biology and Environmental Science, University College Dublin, Belfield, Dublin, Ireland
- UCD Centre for Plant Science, University College Dublin, Belfield, Dublin, Ireland
- UCD Earth Institute, University College Dublin, Belfield, Dublin, Ireland
| | - Vicente Mariscal
- Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Américo Vespucio 49, 41092 Sevilla, Spain
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21
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Ghotbi-Ravandi AA, Shariatmadari Z, Riahi H, Hassani SB, Heidari F, Ghorbani Nohooji M. Enhancement of Essential Oil Production and Expression of Some Menthol Biosynthesis-Related Genes in Mentha piperita Using Cyanobacteria. IRANIAN JOURNAL OF BIOTECHNOLOGY 2023; 21:e3550. [PMID: 38269195 PMCID: PMC10804067 DOI: 10.30498/ijb.2023.368377.3550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Accepted: 08/19/2023] [Indexed: 01/26/2024]
Abstract
Background Mentha piperita L. is one of the most important aromatic crops and is cultivated worldwide for essential oils (EOs). Objectives The aim of the present study was to investigate the potential of two cyanobacteria, Anabaena vaginicola ISB42 and Nostoc spongiaeforme var. tenue ISB65, as biological-elicitors to improve the growth and essential oil production of M. piperita. Materials and Methods In this experiment, inoculation of M. piperita with cyanobacteria was performed by adding 1% cyanobacterial suspension to the soil of treated pots on the first time of planting and every 20 days thereafter. The experiment was performed in a randomized complete block design in an experimental greenhouse condition. After 90 days planting, the vegetative growth factors, the content of photosynthetic pigments, as well as the quantity and quality of EOs of treated and control plants were evaluated. Also, quantitative changes in the expression of some menthol biosynthesis-related genes were investigated. Results Cyanobacterial application led to significant increases in M. piperita growth indices including root and shoot biomass, leaf number, leaf area, node number and ramification, as well as photosynthetic pigments content. The statistical analysis showed a 41-75 % increase in some of these growth indices, especially in Nostoc-treated plants. A. vaginicola and N. spongiaeforme var. tenue inoculation led to a 13% and 25% increase in the EOs content of M. piperita, respectively. The EOs components were also affected by cyanobacterial treatments. According to the statistical analysis, Nostoc-treated plants showed the highest amount of (-)-menthone and (-)-limonene, with a 2.36 and 1.87-fold increase compared to the control. A. vaginicola and N. spongiaeforme var. tenue inoculation also led to 40% and 98% increase in transcript level of (-)-limonene synthase gene, respectively. The expression of the (-)-menthone reductase gene, was also increased by 65% and 55% in response to A. vaginicola and N. spongiaeforme var. tenue application, respectively. Conclusions Our data demonstrated that in addition to growth enhancement, these two heterocystous cyanobacteria improved the quantity and quality of EOs by up-regulating the key genes involved in the menthol biosynthetic pathway. Based on our results, these cyanobacteria can be considered valuable candidates in the formulation of low-cost and environmentally friendly biofertilizers in sustainable peppermint production.
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Affiliation(s)
- Ali Akbar Ghotbi-Ravandi
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Zeinab Shariatmadari
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Hossein Riahi
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Seyedeh Batool Hassani
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Fatemeh Heidari
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
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22
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Singh PR, Pathak J, Rajneesh, Ahmed H, Häder DP, Sinha RP. Physiological responses of the cyanobacterium Synechocystis sp. PCC 6803 under rhythmic light variations. Photochem Photobiol Sci 2023; 22:2055-2069. [PMID: 37227683 DOI: 10.1007/s43630-023-00429-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Accepted: 04/26/2023] [Indexed: 05/26/2023]
Abstract
Cyanobacteria are challenged by daily fluctuations of light intensities and photoperiod in their natural habitats, which affect the physiology and fitness of cyanobacteria. Circadian rhythms (CRs), an important endogenous process found in all organisms including cyanobacteria, control their physiological activities and helps in coping with 24-h light/dark (LD) cycle. In cyanobacteria, physiological responses under rhythmic ultraviolet radiation (UVR) are poorly studied. Therefore, we studied the changes in photosynthetic pigments, and physiological parameters of Synechocystis sp. PCC 6803 under UVR and photosynthetically active radiation (PAR) of light/dark (LD) oscillations having the combinations of 0, 4:20, 8:16, 12:12, 16:8, 20:4, and 24:24 h. The LD 16:8 enhanced the growth, pigments, proteins, photosynthetic efficiency, and physiology of Synechocystis sp. PCC6803. Continuous light (LL 24) of UVR and PAR exerted negative impact on the photosynthetic pigments, and chlorophyll fluorescence. Significant increase in reactive oxygen species (ROS) resulted in loss of plasma membrane integrity followed by decreased viability of cells. The dark phase played a significant role in Synechocystis to withstand the LL 24 under PAR and UVR. This study offers detailed understanding of the physiological responses of the cyanobacterium to changing light environment.
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Affiliation(s)
- Prashant R Singh
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Jainendra Pathak
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
- Department of Botany, Pt. Jawaharlal Nehru College (Affiliated to Bundelkhand University, Jhansi), Banda, 210001, India
| | - Rajneesh
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Haseen Ahmed
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Donat-P Häder
- Department of Biology, Emeritus From Friedrich-Alexander University, Neue Str. 9, 91096, Möhrendorf, Germany
| | - Rajeshwar P Sinha
- Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, 221005, India.
- University Center for Research and Development (UCRD), Chandigarh University, Chandigarh, India.
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23
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Kageyama H, Waditee-Sirisattha R. Halotolerance mechanisms in salt‑tolerant cyanobacteria. ADVANCES IN APPLIED MICROBIOLOGY 2023; 124:55-117. [PMID: 37597948 DOI: 10.1016/bs.aambs.2023.07.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/21/2023]
Abstract
Cyanobacteria are ubiquitously distributed in nature and are the most abundant photoautotrophs on Earth. Their long evolutionary history reveals that cyanobacteria have a remarkable capacity and strong adaptive tendencies to thrive in a variety of conditions. Thus, they can survive successfully, especially in harsh environmental conditions such as salty environments, high radiation, or extreme temperatures. Among others, salt stress because of excessive salt accumulation in salty environments, is the most common abiotic stress in nature and hampers agricultural growth and productivity worldwide. These detrimental effects point to the importance of understanding the molecular mechanisms underlying the salt stress response. While it is generally accepted that the stress response mechanism is a complex network, fewer efforts have been made to represent it as a network. Substantial evidence revealed that salt-tolerant cyanobacteria have evolved genomic specific mechanisms and high adaptability in response to environmental changes. For example, extended gene families and/or clusters of genes encoding proteins involved in the adaptation to high salinity have been collectively reported. This chapter focuses on recent advances and provides an overview of the molecular basis of halotolerance mechanisms in salt‑tolerant cyanobacteria as well as multiple regulatory pathways. We elaborate on the major protective mechanisms, molecular mechanisms associated with halotolerance, and the global transcriptional landscape to provide a gateway to uncover gene regulation principles. Both knowledge and omics approaches are utilized in this chapter to decipher the mechanistic insights into halotolerance. Collectively, this chapter would have a profound impact on providing a comprehensive understanding of halotolerance in salt‑tolerant cyanobacteria.
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Affiliation(s)
- Hakuto Kageyama
- Graduate School of Environmental and Human Sciences, Meijo University, Nagoya, Japan; Department of Chemistry, Faculty of Science and Technology, Meijo University, Nagoya, Japan.
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24
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Shayesteh H, Laird DW, Hughes LJ, Nematollahi MA, Kakhki AM, Moheimani NR. Co-Producing Phycocyanin and Bioplastic in Arthrospira platensis Using Carbon-Rich Wastewater. BIOTECH 2023; 12:49. [PMID: 37489483 PMCID: PMC10366904 DOI: 10.3390/biotech12030049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Revised: 06/02/2023] [Accepted: 06/08/2023] [Indexed: 07/26/2023] Open
Abstract
Microalgae can treat waste streams containing elevated levels of organic carbon and nitrogen. This process can be economically attractive if high value products are created simultaneously from the relatively low-cost waste stream. Co-production of two high value microalgal products, phycocyanin and polyhydroxybutyrate (PHB), was investigated using non-axenic Arthrospira platensis MUR126 and supplemental organic carbon (acetate, oxalate, glycerol and combinations). All supplemented cultures had higher biomass yield (g/L) than photoautotrophic control. All cultures produced PHB (3.6-7.8% w/w), except the control and those fed oxalate. Supplemented cultures showed a two to three-fold increase in phycocyanin content over the eight-day cultivation. Results indicate co-production of phycocyanin and PHB is possible in A. platensis, using mixed-waste organic carbon. However, supplementation resulted in growth of extremophile bacteria, particularly in cultures fed glycerol, and this had a negative impact on culture health. Refinement of the carbon dosing rate is required to minimise impacts of native bacterial contamination.
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Affiliation(s)
- Hajar Shayesteh
- Centre for Water, Energy and Waste, Harry Butler Institute, Murdoch University, Murdoch 6150, Australia
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad 91779-48978, Iran
| | - Damian W Laird
- Centre for Water, Energy and Waste, Harry Butler Institute, Murdoch University, Murdoch 6150, Australia
| | - Leonie J Hughes
- School of Mathematics, Statistics, Chemistry and Physics, College of Science, Technology, Engineering, and Mathematics, Murdoch University, Murdoch 6150, Australia
| | - Mohammad A Nematollahi
- Department of Fisheries, Faculty of Natural Resources, University of Tehran, Karaj Campus, Tehran 77871-31587, Iran
| | - Amin Mirshamsi Kakhki
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad 91779-48978, Iran
| | - Navid R Moheimani
- Centre for Water, Energy and Waste, Harry Butler Institute, Murdoch University, Murdoch 6150, Australia
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25
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Zahra SA, Purba LDA, Abdullah N, Yuzir A, Iwamoto K, Lei Z, Hermana J. Characteristics of algal-bacterial aerobic granular sludge treating real wastewater: Effects of algal inoculation and alginate-like exopolymers recovery. CHEMOSPHERE 2023; 329:138595. [PMID: 37023906 DOI: 10.1016/j.chemosphere.2023.138595] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 03/16/2023] [Accepted: 04/02/2023] [Indexed: 05/03/2023]
Abstract
Limited information is available on the characteristics of algal-bacterial aerobic granular sludge (AGS) treating real wastewater, especially on its alginate-like exopolymers (ALE) production. In addition, the effect of target microalgae species inoculation on the system performance has not been fully understood. This study aimed to reveal the effect of microalgae inoculation on the characteristics of algal-bacterial AGS and its ALE production potential. Two photo-sequencing batch reactors (PSBR) were employed, namely R1 with activated sludge and R2 with Tetradesmus sp. and activated sludge being inoculated, respectively. Both reactors were fed with locally sourced municipal wastewater and operated for 90 days. Algal-bacterial AGS were successfully cultivated in both reactors. No significant difference was observed between the performances of R1 and R2, reflecting that the inoculation of target microalgae species may not be crucial for the development of algal-bacterial AGS when treating real wastewater. Both reactors achieved an ALE yield of about 70 mg/g of volatile suspended solids (VSS), indicating that a substantial amount of biopolymer can be recovered from wastewater. Interestingly, boron was detected in all the ALE samples, which might contribute to granulation and interspecies quorum sensing. The enrichment of lipids content in ALE from algal-bacterial AGS treating real wastewater reveals its high resource recovery potential. Overall, the algal-bacterial AGS system is a promising biotechnology for simultaneous municipal wastewater treatment and resource (like ALE) recovery.
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Affiliation(s)
- Sasmitha Aulia Zahra
- Department of Chemical and Environmental Engineering, Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia
| | - Laila Dina Amalia Purba
- Department of Chemical and Environmental Engineering, Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia
| | - Norhayati Abdullah
- Department of Chemical and Environmental Engineering, Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia; UTM International, Aras 8, Menara Razak, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia.
| | - Ali Yuzir
- Department of Chemical and Environmental Engineering, Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia
| | - Koji Iwamoto
- Department of Chemical and Environmental Engineering, Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, 54100, Kuala Lumpur, Malaysia
| | - Zhongfang Lei
- Faculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, 305-8572, Japan
| | - Joni Hermana
- Department of Environmental Engineering, Faculty of Civil, Planning and Geoengineering, Institut Teknologi Sepuluh Nopember, Surabaya, 60111, Indonesia
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26
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Cassier-Chauvat C, Marceau F, Farci S, Ouchane S, Chauvat F. The Glutathione System: A Journey from Cyanobacteria to Higher Eukaryotes. Antioxidants (Basel) 2023; 12:1199. [PMID: 37371929 DOI: 10.3390/antiox12061199] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Revised: 05/25/2023] [Accepted: 05/29/2023] [Indexed: 06/29/2023] Open
Abstract
From bacteria to plants and humans, the glutathione system plays a pleiotropic role in cell defense against metabolic, oxidative and metal stresses. Glutathione (GSH), the γ-L-glutamyl-L-cysteinyl-glycine nucleophile tri-peptide, is the central player of this system that acts in redox homeostasis, detoxification and iron metabolism in most living organisms. GSH directly scavenges diverse reactive oxygen species (ROS), such as singlet oxygen, superoxide anion, hydrogen peroxide, hydroxyl radical, nitric oxide and carbon radicals. It also serves as a cofactor for various enzymes, such as glutaredoxins (Grxs), glutathione peroxidases (Gpxs), glutathione reductase (GR) and glutathione-S-transferases (GSTs), which play crucial roles in cell detoxication. This review summarizes what is known concerning the GSH-system (GSH, GSH-derived metabolites and GSH-dependent enzymes) in selected model organisms (Escherichia coli, Saccharomyces cerevisiae, Arabidopsis thaliana and human), emphasizing cyanobacteria for the following reasons. Cyanobacteria are environmentally crucial and biotechnologically important organisms that are regarded as having evolved photosynthesis and the GSH system to protect themselves against the ROS produced by their active photoautotrophic metabolism. Furthermore, cyanobacteria synthesize the GSH-derived metabolites, ergothioneine and phytochelatin, that play crucial roles in cell detoxication in humans and plants, respectively. Cyanobacteria also synthesize the thiol-less GSH homologs ophthalmate and norophthalmate that serve as biomarkers of various diseases in humans. Hence, cyanobacteria are well-suited to thoroughly analyze the role/specificity/redundancy of the players of the GSH-system using a genetic approach (deletion/overproduction) that is hardly feasible with other model organisms (E. coli and S. cerevisiae do not synthesize ergothioneine, while plants and humans acquire it from their soil and their diet, respectively).
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Affiliation(s)
- Corinne Cassier-Chauvat
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91190 Gif-sur-Yvette, France
| | - Fanny Marceau
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91190 Gif-sur-Yvette, France
| | - Sandrine Farci
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91190 Gif-sur-Yvette, France
| | - Soufian Ouchane
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91190 Gif-sur-Yvette, France
| | - Franck Chauvat
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91190 Gif-sur-Yvette, France
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27
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Xing W, Qi B, Chen R, Ding W, Zhang F. Metagenomic analysis reveals taxonomic and functional diversity of microbial communities on the deteriorated wall paintings of Qinling Tomb in the Southern Tang Dynasty, China. BMC Microbiol 2023; 23:140. [PMID: 37202728 DOI: 10.1186/s12866-023-02887-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 05/09/2023] [Indexed: 05/20/2023] Open
Abstract
The microbial colonization on ancient murals attracts more and more attention since the threaten by microorganisms was first reported in Lascaux, Spain. However, the biodeterioration or biodegradation of mural paintings resulted by microorganisms is not clear yet. Especially the biological function of microbial communities in different conditions remained largely unaddressed. The two mausoleums of the Southern Tang Dynasty are the largest group of emperor mausoleums during the Five Dynasties and Ten Kingdoms period in China, which are of great significance to the study of the architecture, imperial mausoleum systems and art in the Tang and Song Dynasties. To make clear the species composition and metabolic functions of different microbial communities (MID and BK), we analyzed the samples from the wall paintings in one of the two mausoleums of the Southern Tang Dynasty with metagenomics method. The result showed totally 55 phyla and 1729 genera were detected in the mural paintings. The two microbial community structure were similar with the dominance of Proteobacteria, Actinobacteria and Cyanobacteria. However, the species abundance presented a significant difference between two communities at genus level --- MID is Lysobacter, Luteimonas are predominant in MID while Sphingomonas and Streptomyces are popular in BK, which is partially attributed to the different substrate materials of murals. As a result, the two communities presented the different metabolic patterns that MID community was mainly participated in the formation of biofilm as well as the degradation of exogenous pollutants while the BK was predominantly related to the photosynthesis process and biosynthesis of secondary metabolites. Taken together, these findings indicated the effect of environmental factor on the taxonomic composition and functional diversity of the microbial populations. The installation of artificial lighting needs to be considered carefully in the future protection of cultural relics.
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Affiliation(s)
- Wei Xing
- Laboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, 19A Yuquan Road, 100049, Beijing, China
| | - Binjie Qi
- Laboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, 19A Yuquan Road, 100049, Beijing, China
| | - Rulong Chen
- Laboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, 19A Yuquan Road, 100049, Beijing, China
| | - Wenjun Ding
- Laboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, 19A Yuquan Road, 100049, Beijing, China.
| | - Fang Zhang
- Laboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, 19A Yuquan Road, 100049, Beijing, China.
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28
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Abo-Shady AM, Osman MEAH, Gaafar RM, Ismail GA, El-Nagar MMF. Cyanobacteria as a Valuable Natural Resource for Improved Agriculture, Environment, and Plant Protection. WATER, AIR, AND SOIL POLLUTION 2023; 234:313. [PMID: 37192997 PMCID: PMC10156578 DOI: 10.1007/s11270-023-06331-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Accepted: 03/21/2023] [Indexed: 05/18/2023]
Abstract
Taking into consideration, the challenges faced by the environment and agro-ecosystem make increased for suggestions more reliable methods to help increase food security and deal with difficult environmental problems. Environmental factors play a critical role in the growth, development, and productivity of crop plants. Unfavorable changes in these factors, such as abiotic stresses, can result in plant growth deficiencies, yield reductions, long-lasting damage, and even death of the plants. In reflection of this, cyanobacteria are now considered important microorganisms that can improve the fertility of soils and the productivity of crop plants due to their different features like photosynthesis, great biomass yield, ability to fix the atmospheric N2, capability to grow on non-arable lands, and varied water sources. Furthermore, numerous cyanobacteria consist of biologically active substances like pigments, amino acids, polysaccharides, phytohormones, and vitamins that support plant growth enhancement. Many studies have exposed the probable role of these compounds in the alleviation of abiotic stress in crop plants and have concluded with evidence of physiological, biochemical, and molecular mechanisms that confirm that cyanobacteria can decrease the stress and induce plant growth. This review discussed the promising effects of cyanobacteria and their possible mode of action to control the growth and development of crop plants as an effective method to overcome different stresses. Graphical Abstract
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Affiliation(s)
- Atef M. Abo-Shady
- Botany Department, Faculty of Science, Tanta University, Tanta, 31527 Egypt
| | | | - Reda M. Gaafar
- Botany Department, Faculty of Science, Tanta University, Tanta, 31527 Egypt
| | - Gehan A. Ismail
- Botany Department, Faculty of Science, Tanta University, Tanta, 31527 Egypt
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29
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Badger Hanson E, Docherty KM. Mini-review: Current and Future Perspectives on Microbially Focused Restoration Strategies in Tallgrass Prairies. MICROBIAL ECOLOGY 2023; 85:1087-1097. [PMID: 36449026 DOI: 10.1007/s00248-022-02150-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Accepted: 11/14/2022] [Indexed: 05/04/2023]
Abstract
Ecosystem restoration is a critical conservation strategy, especially for increasing resilience and resistance to climate change. Current restoration efforts that convert reclaimed agricultural land to native tallgrass prairies typically focus on aboveground communities, but it can take decades to restore soil microbial biodiversity and function using these strategies, if they recover at all. This incomplete restoration can have detrimental impacts on longer-term restoration goals, such as supporting late-successional plant species and facilitating soil carbon sequestration. Soil microorganisms are key components in determining the fate of organic material that enters the soil. They mediate decomposition rates and contribute to plant-microbe-soil interactions, produce microbial biomass, necromass, and metabolic products, and physically protect soil carbon through aggregation. Interactions with plants and controls over soil carbon vary widely depending on the specific microbial taxa present, their physiology, their functional capabilities, and their responses to environmental stressors. Thus, the ability for new restorations, prairie conservation corridors, and prairies planted in marginal lands to act as carbon sinks and help balance greenhouse gas emissions can depend on the success of microbial restoration. Next-generation sequencing approaches can support novel methods for evaluating existing restoration practices and developing microbially focused management strategies. This review summarizes the growing body of literature describing microbially focused tallgrass prairie restoration and considers when and how integrating next-generation sequencing approaches into management efforts can be beneficial. We provide a roadmap for future restoration efforts where microbial ecologists, restoration ecologists, and land managers can work together to meet their goals to promote climate-ready restored ecosystems.
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Affiliation(s)
- Ellen Badger Hanson
- Department of Biological Sciences, Western Michigan University, 1903 West Michigan Avenue, Kalamazoo, MI, 49008, USA
| | - Kathryn M Docherty
- Department of Biological Sciences, Western Michigan University, 1903 West Michigan Avenue, Kalamazoo, MI, 49008, USA.
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30
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Culture supernatants of the cyanobacterium Trichormus sp. promote the growth of the grass Polypogon australis Brong: Role of P and Mn. ALGAL RES 2023. [DOI: 10.1016/j.algal.2023.103032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2023]
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Lopes GB, Goelzer A, Reichel T, de Resende MLV, Duarte WF. Potential of Desmodesmus abundans as biofertilizer in common bean (Phaseolus vulgaris L.). BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2023. [DOI: 10.1016/j.bcab.2023.102657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023]
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32
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Su J, Teng H(H, Wan X, Zhang J, Liu CQ. Direct Air Capture of CO 2 through Carbonate Alkalinity Generated by Phytoplankton Nitrate Assimilation. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 20:550. [PMID: 36612873 PMCID: PMC9820007 DOI: 10.3390/ijerph20010550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 12/10/2022] [Accepted: 12/26/2022] [Indexed: 06/17/2023]
Abstract
Despite the consensus that keeping global temperature rise within 1.5 °C above pre-industrial level by 2100 reduces the chance for climate change to reach the point of no return, the newest Intergovernmental Panel on Climate Change (IPCC) report warns that the existing commitment of greenhouse gas emission reduction is only enough to contain the warming to 3-4 °C by 2100. The harsh reality not only calls for speedier deployment of existing CO2 reduction technologies but demands development of more cost-efficient carbon removal strategies. Here we report an ocean alkalinity-based CO2 sequestration scheme, taking advantage of proton consumption during nitrate assimilation by marine photosynthetic microbes, and the ensuing enhancement of seawater CO2 absorption. Benchtop experiments using a native marine phytoplankton community confirmed pH elevation from ~8.2 to ~10.2 in seawater, within 3-5 days of microbial culture in nitrate-containing media. The alkaline condition was able to sustain at continued nutrient supply but reverted to normalcy (pH ~8.2-8.4) once the biomass was removed. Measurements of δ13C in the dissolved inorganic carbon revealed a significant atmospheric CO2 contribution to the carbonate alkalinity in the experimental seawater, confirming the occurrence of direct carbon dioxide capture from the air. Thermodynamic calculation shows a theoretical carbon removal rate of ~0.13 mol CO2/L seawater, if the seawater pH is allowed to decrease from 10.2 to 8.2. A cost analysis (using a standard bioreactor wastewater treatment plant as a template for CO2 trapping, and a modified moving-bed biofilm reactor for nitrate recycling) indicated that a 1 Mt CO2/year operation is able to perform at a cost of ~$40/tCO2, 2.5-5.5 times cheaper than that offered by any of the currently available direct air capture technologies, and more in line with the price of $25-30/tCO2 suggested for rapid deployment of large-scale CCS systems.
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Affiliation(s)
- Jing Su
- School of Earth System Science, Tianjin University, Tianjin 300072, China
| | - Hui (Henry) Teng
- School of Earth System Science, Tianjin University, Tianjin 300072, China
| | - Xiang Wan
- Key Laboratory of Horticultural Plant Biology, The Ministry of Education, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
- Hubei Geological Survey, Wuhan 430034, China
| | - Jianchao Zhang
- School of Earth System Science, Tianjin University, Tianjin 300072, China
| | - Cong-Qiang Liu
- School of Earth System Science, Tianjin University, Tianjin 300072, China
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A Review on a Hidden Gem: Phycoerythrin from Blue-Green Algae. Mar Drugs 2022; 21:md21010028. [PMID: 36662201 PMCID: PMC9863059 DOI: 10.3390/md21010028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Revised: 12/21/2022] [Accepted: 12/24/2022] [Indexed: 12/31/2022] Open
Abstract
Phycoerythrin (PE) is a pink/red-colored pigment found in rhodophytes, cryptophytes, and blue-green algae (cyanobacteria). The interest in PE is emerging from its role in delivering health benefits. Unfortunately, the current cyanobacterial-PE (C-PE) knowledge is still in the infant stage. It is essential to acquire a more comprehensive understanding of C-PE. This study aimed to review the C-PE structure, up and downstream processes of C-PE, application of C-PE, and strategies to enhance its stability and market value. In addition, this study also presented a strengths, weaknesses, opportunities, and threats (SWOT) analysis on C-PE. Cyanobacteria appeared to be the more promising PE producers compared to rhodophytes, cryptophytes, and macroalgae. Green/blue light is preferred to accumulate higher PE content in cyanobacteria. Currently, the prominent C-PE extraction method is repeated freezing-thawing. A combination of precipitation and chromatography approaches is proposed to obtain greater purity of C-PE. C-PE has been widely exploited in various fields, such as nutraceuticals, pharmaceuticals, therapeutics, cosmetics, biotechnology, food, and feed, owing to its bioactivities and fluorescent properties. This review provides insight into the state-of-art nature of C-PE and advances a step further in commercializing this prospective pigment.
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Touloupakis E, Zittelli GC, Benavides AMS, Torzillo G. Growth and photosynthetic performance of Nostoc linckia (formerly N. calcicola) cells grown in BG11 and BG11 0 media. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES : OFFICIAL JOURNAL OF THE EUROPEAN PHOTOCHEMISTRY ASSOCIATION AND THE EUROPEAN SOCIETY FOR PHOTOBIOLOGY 2022; 22:795-807. [PMID: 36550226 DOI: 10.1007/s43630-022-00353-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 12/07/2022] [Indexed: 12/24/2022]
Abstract
The biotechnological potential of Nostoc linckia as a biofertilizer and source of bioactive compounds makes it important to study its growth physiology and productivity. Since nitrogen is a fundamental component of N. linckia biomass, we compared the growth and biochemical composition of cultures grown in BG11 (i.e., in the presence of nitrate) and BG110 (in the absence of nitrate). Cultures grown in BG11 accumulated more cell biomass reaching a dry weight of 1.65 ± 0.06 g L-1, compared to 0.92 ± 0.01 g L-1 in BG110 after 240 h of culture. Biomass productivity was higher in culture grown in BG11 medium (average 317 ± 38 mg L-1 day-1) compared to that attained in BG110 (average 262 ± 37 mg L-1 day-1). The chlorophyll content of cells grown in BG11 increased continuously up to (39.0 ± 1.3 mg L-1), while in BG110 it increased much more slowly (13.6 ± 0.8 mg L-1). Biomass grown in BG11 had higher protein and phycobilin contents. However, despite the differences in biochemical composition and pigment concentration, between BG11 and BG110 cultures, both their net photosynthetic rates and maximum quantum yields of the photosystem II resulted in similar.
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Affiliation(s)
- Eleftherios Touloupakis
- Istituto di Ricerca sugli Ecosistemi Terrestri, CNR, Via Madonna del Piano, 10 Sesto Fiorentino, 50019, Florence, Italy
| | - Graziella Chini Zittelli
- Istituto per la Bioeconomia, CNR, Via Madonna del Piano 10 Sesto Fiorentino, 50019, Florence, Italy
| | - Ana Margarita Silva Benavides
- Centro de Investigación en Ciencias Del Mar y Limnologίa, Universidad de Costa Rica, San Pedro, San José, 2060, Costa Rica.,Escuela de Biologia, Universidad de Costa Rica, San Pedro, San José, 2060, Costa Rica
| | - Giuseppe Torzillo
- Istituto per la Bioeconomia, CNR, Via Madonna del Piano 10 Sesto Fiorentino, 50019, Florence, Italy. .,Centro de Investigación en Ciencias Del Mar y Limnologίa, Universidad de Costa Rica, San Pedro, San José, 2060, Costa Rica.
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Silva IVG, Silva KL, Maia RC, Duarte HM, Coutinho R, Neves MHCB, Soares AR, Lopes GPF. Crosstalk between biological and chemical diversity with cytotoxic and cytostatic effects of Aphanothece halophytica in vitro. AN ACAD BRAS CIENC 2022; 94:e20211585. [PMID: 36515327 DOI: 10.1590/0001-3765202220211585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 04/04/2022] [Indexed: 12/14/2022] Open
Abstract
Different solvent extracts from Aphanothece halophytica (A. halophytica) were evaluated for their cytotoxic effects against four human cancer cell lines. The samples demonstrated different percentages of cyanobacteria species populations. The samples containing 100% A. halophytica and 90% A. halophytica showed a significant cytotoxic effect in human breast cancer cells MDA231. The cytostatic effect was demonstrated in MDA231 and human glioblastoma T98G cells regardless of the treatment, resulting in a significant cell cycle arrest in the S phase. The chemical profiles of the extracts were proven to be diverse in qualitative and quantitative compositions. This variability was dependent on the A. halophytica´s abundance in each extract. The 100% A. halophytica extract induced cytotoxic and cytostatic effects in breast cancer cells, and those could be associated with the predominance of fatty acids, hydrocarbons and phthalates, indicating that A. halophytica is an interesting source of novel compound with anticancer effect.
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Affiliation(s)
- Isabel V G Silva
- Programa Associado de Pós-Graduação em Biotecnologia Marinha, Instituto de Estudos do Mar Almirante Paulo Moreira (IEAPM)/Universidade Federal Fluminense (UFF), Rua Daniel Barreto, s/n, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil
| | - Karina L Silva
- Coordenação de Pesquisa, Instituto Nacional de Câncer (INCA), Rua André Cavalcanti, 37, Centro, 20321-050 Rio de Janeiro, RJ, Brazil
| | - Raquel C Maia
- Programa de Hemato-Oncologia Molecular, Instituto Nacional de Câncer (INCA), Praça da Cruz Vermelha, 23, Centro, 20230-130 Rio de Janeiro, RJ, Brazil
| | - Heitor M Duarte
- Programa Associado de Pós-Graduação em Biotecnologia Marinha, Instituto de Estudos do Mar Almirante Paulo Moreira (IEAPM)/Universidade Federal Fluminense (UFF), Rua Daniel Barreto, s/n, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil.,Grupo de Produtos Naturais de Organismos Aquáticos (GPNOA), Instituto de Biodiversidade e Sustentabilidade (NUPEM), Universidade Federal do Rio de Janeiro, Av. São José do Barreto, 764, São José do Barreto, 27965-045 Macaé, RJ, Brazil
| | - Ricardo Coutinho
- Programa Associado de Pós-Graduação em Biotecnologia Marinha, Instituto de Estudos do Mar Almirante Paulo Moreira (IEAPM)/Universidade Federal Fluminense (UFF), Rua Daniel Barreto, s/n, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil.,Instituto de Estudos do Mar Almirante Paulo Moreira, Departamento de Biotecnologia Marinha, Rua Kioto, 253, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil
| | - Maria Helena C B Neves
- Programa Associado de Pós-Graduação em Biotecnologia Marinha, Instituto de Estudos do Mar Almirante Paulo Moreira (IEAPM)/Universidade Federal Fluminense (UFF), Rua Daniel Barreto, s/n, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil.,Instituto de Estudos do Mar Almirante Paulo Moreira, Departamento de Biotecnologia Marinha, Rua Kioto, 253, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil
| | - Angelica R Soares
- Programa Associado de Pós-Graduação em Biotecnologia Marinha, Instituto de Estudos do Mar Almirante Paulo Moreira (IEAPM)/Universidade Federal Fluminense (UFF), Rua Daniel Barreto, s/n, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil.,Grupo de Produtos Naturais de Organismos Aquáticos (GPNOA), Instituto de Biodiversidade e Sustentabilidade (NUPEM), Universidade Federal do Rio de Janeiro, Av. São José do Barreto, 764, São José do Barreto, 27965-045 Macaé, RJ, Brazil
| | - Giselle P F Lopes
- Programa Associado de Pós-Graduação em Biotecnologia Marinha, Instituto de Estudos do Mar Almirante Paulo Moreira (IEAPM)/Universidade Federal Fluminense (UFF), Rua Daniel Barreto, s/n, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil.,Instituto de Estudos do Mar Almirante Paulo Moreira, Departamento de Biotecnologia Marinha, Rua Kioto, 253, Praia dos Anjos, 28930-000 Arraial do Cabo, RJ, Brazil
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Hamad HS, Bleih EM, Gewaily EE, Abou Elataa AE, El Sherbiny HA, Abdelhameid NM, Rehan M. Cyanobacteria Application Ameliorates Floral Traits and Outcrossing Rate in Diverse Rice Cytoplasmic Male Sterile Lines. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11243411. [PMID: 36559523 PMCID: PMC9781212 DOI: 10.3390/plants11243411] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Revised: 11/04/2022] [Accepted: 12/05/2022] [Indexed: 05/14/2023]
Abstract
In rice, cytoplasmic male sterility (CMS) represents an irreplaceable strategy for producing high-yielding hybrid rice based on the commercial exploitation of heterosis. Thereupon, enhancing floral traits and outcrossing rates in CMS lines increase hybrid seed production and ensure global food security. The exogenous application of cyanobacteria could enhance outcrossing rates in CMS lines and, accordingly, hybrid rice seed production. In the present study, we aimed at exploring the impact of cyanobacteria implementation such as Anabaena oryzae, Nostoc muscorum, and their mixture to promote the floral traits, outcrossing rates, and seed production in hybrid rice. The impact of cyanobacteria (Anabaena Oryza (T2), Nostoc muscorum (T3), and their combination (T4) versus the untreated control (T1) was investigated for two years on the growth, floral, and yield traits of five diverse CMS lines, namely IR69625A (L1), IR58025A (L2), IR70368A (L3), G46A (L4), and K17A(L5). The evaluated CMS lines exhibited significant differences in all measured floral traits (days to heading (DTH), total stigma length (TSL), stigma width (SW), duration of spikelet opening (DSO), spikelet opening angle (SOA)). Additionally, L4 displayed the uppermost total stigma length and stigma width, whereas L1 and L5 recorded the best duration of spikelet opening and spikelet opening angle. Notably, these mentioned CMS lines exhibited the highest plant growth and yield traits, particularly under T4 treatment. Strong positive relationships were distinguished between the duration of the spikelet opening, panicle exertion, panicle weight, seed set, grain yield, total stigma length, spikelet opening angle, stigma width, and number of fertile panicles per hill. Cyanobacteria is a potential promising tool to increase floral traits and seed production in hybrid rice.
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Affiliation(s)
- Hassan Sh. Hamad
- Rice Research and Training Department, Field Crops Research Institute, Agricultural Research Center, Kafrelsheikh 33717, Egypt
| | - Eman M. Bleih
- Rice Research and Training Department, Field Crops Research Institute, Agricultural Research Center, Kafrelsheikh 33717, Egypt
| | - Elsayed E. Gewaily
- Rice Research and Training Department, Field Crops Research Institute, Agricultural Research Center, Kafrelsheikh 33717, Egypt
| | - Ahmed E. Abou Elataa
- Rice Research and Training Department, Field Crops Research Institute, Agricultural Research Center, Kafrelsheikh 33717, Egypt
| | - Heba A. El Sherbiny
- Rice Research and Training Department, Field Crops Research Institute, Agricultural Research Center, Kafrelsheikh 33717, Egypt
| | - Noha M. Abdelhameid
- Soil Fertility and Microbiology Department, Desert Research Center (DRC), Cairo 11753, Egypt
| | - Medhat Rehan
- Department of Plant Production and Protection, College of Agriculture and Veterinary Medicine, Qassim University, Buraydah 51452, Saudi Arabia
- Department of Genetics, Faculty of Agriculture, Kafrelsheikh University, Kafr El-Sheikh 33516, Egypt
- Correspondence: or
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Emerging Trends of Nanotechnology and Genetic Engineering in Cyanobacteria to Optimize Production for Future Applications. LIFE (BASEL, SWITZERLAND) 2022; 12:life12122013. [PMID: 36556378 PMCID: PMC9781209 DOI: 10.3390/life12122013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 11/20/2022] [Accepted: 11/28/2022] [Indexed: 12/12/2022]
Abstract
Nanotechnology has the potential to revolutionize various fields of research and development. Multiple nanoparticles employed in a nanotechnology process are the magic elixir that provides unique features that are not present in the component's natural form. In the framework of contemporary research, it is inappropriate to synthesize microparticles employing procedures that include noxious elements. For this reason, scientists are investigating safer ways to produce genetically improved Cyanobacteria, which has many novel features and acts as a potential candidate for nanoparticle synthesis. In recent decades, cyanobacteria have garnered significant interest due to their prospective nanotechnological uses. This review will outline the applications of genetically engineered cyanobacteria in the field of nanotechnology and discuss its challenges and future potential. The evolution of cyanobacterial strains by genetic engineering is subsequently outlined. Furthermore, the recombination approaches that may be used to increase the industrial potential of cyanobacteria are discussed. This review provides an overview of the research undertaken to increase the commercial avenues of cyanobacteria and attempts to explain prospective topics for future research.
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Mandhata CP, Sahoo CR, Padhy RN. Biomedical Applications of Biosynthesized Gold Nanoparticles from Cyanobacteria: an Overview. Biol Trace Elem Res 2022; 200:5307-5327. [PMID: 35083708 DOI: 10.1007/s12011-021-03078-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 12/20/2021] [Indexed: 11/28/2022]
Abstract
Recently there had been a great interest in biologically synthesized nanoparticles (NPs) as potential therapeutic agents. The shortcomings of conventional non-biological synthesis methods such as generation of toxic byproducts, energy consumptions, and involved cost have shifted the attention towards green syntheses of NPs. Among noble metal NPs, gold nanoparticles (AuNPs) are the most extensively used ones, owing to the unique physicochemical properties. AuNPs have potential therapeutic applications, as those are synthesized with biomolecules as reducing and stabilizing agent(s). The green method of AuNP synthesis is simple, eco-friendly, non-toxic, and cost-effective with the use of renewable energy sources. Among all taxa, cyanobacteria have attracted considerable attention as nano-biofactories, due to cellular uptake of heavy metals from the environment. The cellular bioactive pigments, enzymes, and polysaccharides acted as reducing and coating agents during the process of biosynthesis. However, cyanobacteria-mediated AuNPs have potential biomedical applications, namely, targeted drug delivery, cancer treatment, gene therapy, antimicrobial agent, biosensors, and imaging.
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Affiliation(s)
- Chinmayee Priyadarsani Mandhata
- Central Research Laboratory, Institute of Medical Sciences & SUM Hospital, Siksha O Anusandhan Deemed To Be University, Bhubaneswar, Odisha, India
| | - Chita Ranjan Sahoo
- Central Research Laboratory, Institute of Medical Sciences & SUM Hospital, Siksha O Anusandhan Deemed To Be University, Bhubaneswar, Odisha, India
| | - Rabindra Nath Padhy
- Central Research Laboratory, Institute of Medical Sciences & SUM Hospital, Siksha O Anusandhan Deemed To Be University, Bhubaneswar, Odisha, India.
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Kallingal A, Ayyolath A, Thachan Kundil V, Maniyeri Suresh A, Muringayil Joseph T, Haponiuk J, Thomas S, Augustine A. Divulging the anti-acetylcholinesterase activity of Colletotrichum lentis strain KU1 extract as sustainable AChE active site inhibitors. Arch Microbiol 2022; 204:713. [DOI: 10.1007/s00203-022-03288-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 09/23/2022] [Accepted: 10/17/2022] [Indexed: 11/18/2022]
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Ahsan H, Shahid M, Imran M, Mahmood F, Siddique MH, Ali HM, Niazi MB, Hussain S, Shahbaz M, Ayyub M, Shahzad T. Photocatalysis and adsorption kinetics of azo dyes by nanoparticles of nickel oxide and copper oxide and their nanocomposite in an aqueous medium. PeerJ 2022; 10:e14358. [PMID: 36405015 PMCID: PMC9671035 DOI: 10.7717/peerj.14358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 10/18/2022] [Indexed: 11/16/2022] Open
Abstract
Background Azo dyes are recalcitrant organic pollutants present in textile industry effluents. Conventional treatment methods to remove them come with a range of disadvantages. Nanoparticles and their nanocomposites offer more efficient, less expensive and easy to handle wastewater treatment alternative. Methods In this study, nanoparticles of nickel oxide (NiO-NPs), copper oxide (CuO-NPs) and their nanocomposite (NiO/CuO-NC) were synthesized using co-precipitation method. The functional groups present on the surface of synthesized nanomaterials were verified using Fourier-transform infrared spectroscopy (FTIR). Surface morphology was assessed using scanning electron microscopy (SEM) whereas purity, shape and size of the crystallite were determined using X-ray diffraction (XRD) technique. The potential of these nanomaterials to degrade three dyes i.e., Reactive Red-2 (RR-2), Reactive Black-5 (RB-5) and Orange II sodium salt (OII) azo dyes, was determined in an aqueous medium under visible light (photocatalysis). The photodegradation effectiveness of all nanomaterials was evaluated under different factors like nanomaterial dose (0.02-0.1 g 10 mL-1), concentration of dyes (20-100 mg L-1), and irradiation time (60-120 min). They were also assessed for their potential to adsorb RR-2 and OII dyes. Results Results revealed that at optimum concentration (60 mgL-1) of RR-2, RB-5, and OII dyes, NiO-NPs degraded 90, 82 and 83%, CuO-NPs degraded 49, 34, and 44%, whereas the nanocomposite NiO/CuO-NC degraded 92, 93, and 96% of the said dyes respectively. The nanomaterials were categorized as the efficient degraders of the dyes in the order: NiO/CuO-NC > NiO-NPs > CuO-NPs. The highest degradation potential shown by the nanocomposite was attributed to its large surface area, small particles size, and quick reactions which were proved by advance analytical techniques. The equilibrium and kinetic adsorption of RR-2 and OII on NiO-NPs, CuO-NPs, and NiO/CuO-NC were well explained with Langmuir and Pseudo second order model, respectively (R2 ≥ 0.96). The maximum RR-2 adsorption (103 mg/g) was obtained with NiO/CuO-NC. It is concluded that nanocomposites are more efficient and promising for the dyes degradation from industrial wastewater as compared with dyes adsorption onto individual NPs. Thus, the nanocomposite NiO/CuO-NC can be an excellent candidate for photodegradation as well as the adsorption of the dyes in aqueous media.
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Affiliation(s)
- Hajra Ahsan
- Department of Environmental Sciences, Government College University, Faisalabad, Pakistan
| | - Muhammad Shahid
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Muhammad Imran
- Department of Environmental Sciences, COMSATS University Islamabad, Vehari-Campus, Vehari, Pakistan
| | - Faisal Mahmood
- Department of Environmental Sciences, Government College University, Faisalabad, Pakistan
| | | | - Hayssam M. Ali
- Botany and Microbiology Department, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Muhammad B.K. Niazi
- School of Chemical and Materials Engineering, National University of Sciences & Technology, Islamabad, Pakistan
| | - Sabir Hussain
- Department of Environmental Sciences, Government College University, Faisalabad, Pakistan
| | - Muhammad Shahbaz
- Centre for Environmental and Climate Science, Lund University, Lund, Sweden
| | - Mudassar Ayyub
- Department of Environmental Sciences, Government College University, Faisalabad, Pakistan
| | - Tanvir Shahzad
- Department of Environmental Sciences, Government College University, Faisalabad, Pakistan
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Biodesalination performance of Phormidium keutzingianum concentrated using two methods (immobilization and centrifugation). ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2022.104282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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Clagnan E, D'Imporzano G, Dell'Orto M, Bani A, Dumbrell AJ, Parati K, Acién-Fernández FG, Portillo-Hahnefeld A, Martel-Quintana A, Gómez-Pinchetti JL, Adani F. Centrate as a sustainable growth medium: Impact on microalgal inocula and bacterial communities in tubular photobioreactor cultivation systems. BIORESOURCE TECHNOLOGY 2022; 363:127979. [PMID: 36126844 DOI: 10.1016/j.biortech.2022.127979] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 09/11/2022] [Accepted: 09/12/2022] [Indexed: 06/15/2023]
Abstract
Centrate is a low-cost alternative to synthetic fertilizers for microalgal cultivation, reducing environmental burdens and remediation costs. Adapted microalgae need to be selected and characterised to maximise biomass production and depuration efficiency. Here, the performance and composition of six microalgal communities cultivated both on synthetic media and centrate within semi-open tubular photobioreactors were investigated through Illumina sequencing. Biomass grown on centrate, exposed to a high concentration of ammonium, showed a higher quantity of nitrogen (5.6% dry weight) than the biomass grown on the synthetic media nitrate (3.9% dry weight). Eukaryotic inocula were replaced by other microalgae while cyanobacterial inocula were maintained. Communities were generally similar for the same inoculum between media, however, inoculation with cyanobacteria led to variability within the eukaryotic community. Where communities differed, centrate resulted in a higher richness and diversity. The higher nitrogen of centrate possibly led to higher abundance of genes coding for N metabolism enzymes.
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Affiliation(s)
- Elisa Clagnan
- Gruppo Ricicla labs., Dipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia (DiSAA), Università degli studi di Milano, Via Celoria 2, 20133, Italy
| | - Giuliana D'Imporzano
- Gruppo Ricicla labs., Dipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia (DiSAA), Università degli studi di Milano, Via Celoria 2, 20133, Italy.
| | - Marta Dell'Orto
- Gruppo Ricicla labs., Dipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia (DiSAA), Università degli studi di Milano, Via Celoria 2, 20133, Italy
| | - Alessia Bani
- Gruppo Ricicla labs., Dipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia (DiSAA), Università degli studi di Milano, Via Celoria 2, 20133, Italy; School of Life Science, University of Essex, Wivenhoe Park, Colchester, Essex CO3 4SQ, UK; Istituto Sperimentale Lazzaro Spallanzani, loc La Quercia, 2602 Rivolta d'Adda, CR, Italy
| | - Alex J Dumbrell
- School of Life Science, University of Essex, Wivenhoe Park, Colchester, Essex CO3 4SQ, UK
| | - Katia Parati
- Istituto Sperimentale Lazzaro Spallanzani, loc La Quercia, 2602 Rivolta d'Adda, CR, Italy
| | - Francisco Gabriel Acién-Fernández
- Department of Chemical Engineering, CIESOL Solar Energy Research Centre, University of Almeria, Cañada San Urbano, s/n, 04120 Almeria, Spain
| | - Agustín Portillo-Hahnefeld
- Spanish Bank of Algae (BEA), Institute of Oceanography and Global Change (IOCAG), University of Las Palmas de Gran Canaria, Muelle de Taliarte s/n, 35214 Telde, Canary Islands, Spain
| | - Antera Martel-Quintana
- Spanish Bank of Algae (BEA), Institute of Oceanography and Global Change (IOCAG), University of Las Palmas de Gran Canaria, Muelle de Taliarte s/n, 35214 Telde, Canary Islands, Spain
| | - Juan Luis Gómez-Pinchetti
- Spanish Bank of Algae (BEA), Institute of Oceanography and Global Change (IOCAG), University of Las Palmas de Gran Canaria, Muelle de Taliarte s/n, 35214 Telde, Canary Islands, Spain
| | - Fabrizio Adani
- Gruppo Ricicla labs., Dipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia (DiSAA), Università degli studi di Milano, Via Celoria 2, 20133, Italy
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Langmuir monolayers as models of the lipid matrix of cyanobacterial thylakoid membranes. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Prospects of cyanobacterial pigment production: biotechnological potential and optimization strategies. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Al Bazedi G, Soliman N, Sewilam H. Novel organic draw solution in forward osmosis process for fertigation: performance evaluation and flux prediction. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:68881-68891. [PMID: 35554813 PMCID: PMC9508070 DOI: 10.1007/s11356-022-20674-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 05/03/2022] [Indexed: 06/15/2023]
Abstract
Fertilizer-drawn forward osmosis (FDFO) has received a lot of attention for its potential for producing fertigated water for agriculture purposes. To minimize the use of chemical-based fertilizers and support sustainable organic agriculture, this work investigated the separation performance of FO membrane for different feed concentrations (FS) of brackish water using microalgae Spirulina platensis as an organic fertilizer draw solution (DS). Different feed solution concentrations were investigated ranging 3-20 g/L NaCl, with various draw solutions of spirulina ranging 280-440 g/L. The performance was measured by water flux and recovery. The results showed that using spirulina as a draw solution is a promising solution for fertigation purposes. The results showed that Na+ in feed solution is concentrated by 41%, Cl- by 36%, and spirulina is diluted by 20% for feed salinity 5000 mg/L. The highest flux obtained with different feed solution 3000/5000/10,000/20,000 mg/L were 9/6/4.5/7 for draw solution concentration of 360/360/400/420 g/L. The calculated specific reverse solute flux (SRSF) JS/JW varies from 0.1 and 0.8 for different explored FS/DS concentrations. Flux decline and the down-time was investigated for the highest flux observed, showing 290 min of operation before cleaning action is required.
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Affiliation(s)
- Ghada Al Bazedi
- Center for Applied Research on the Environment and Sustainability (CARES), School of Science and Engineering, The American University in Cairo, AUC Avenue, P.O. Box: 74, New Cairo, 11835, Egypt
- Chemical Engineering & Pilot Plant Department, Engineering Research Division, National Research Center, 33 El-Bohouth St, Dokki, 12311, Cairo Post Code, Egypt
| | - Noha Soliman
- Center for Applied Research on the Environment and Sustainability (CARES), School of Science and Engineering, The American University in Cairo, AUC Avenue, P.O. Box: 74, New Cairo, 11835, Egypt
| | - Hani Sewilam
- Center for Applied Research on the Environment and Sustainability (CARES), School of Science and Engineering, The American University in Cairo, AUC Avenue, P.O. Box: 74, New Cairo, 11835, Egypt.
- Department of Engineering Hydrology, RWTH Aachen University, Mies-van-der-Rohe Strasse 17, 52074, Aachen, Germany.
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Li H, Miller T, Lu J, Goel R. Nitrogen fixation contribution to nitrogen cycling during cyanobacterial blooms in Utah Lake. CHEMOSPHERE 2022; 302:134784. [PMID: 35504465 PMCID: PMC10149033 DOI: 10.1016/j.chemosphere.2022.134784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2022] [Revised: 04/23/2022] [Accepted: 04/27/2022] [Indexed: 05/03/2023]
Abstract
Nitrogen (N) cycling is an essential process in lake systems and N-fixation is an important component of it. Recent studies have also found that nitrate reduction through heterotrophic denitrification in lake systems did not prevent harmful cyanobacterial blooms, but instead, may have favored the dominance of N2-fixing cyanobacteria. The overall objective of this study was to estimate nitrogen fixation rates and the expressions of associated nitrogenase (nif gene) functional gene at several sites at different occasions in freshwater Utah Lake. For comparison purposes, one time sampling was also conducted in the brackish Farmington Bay of Great Salt Lake (GSL). The microbial ecology of the top 20-cm of surface water was investigated to assess the dominant cyanobacterial communities and N-related metabolisms. Our study revealed that Dolichospermum and Nodularia were potential N2-fixers for Utah Lake and brackish Farmington Bay, respectively. The in situ N2-fixation rates were 0-0.73 nmol N hr-1L-1 for Utah Lake and 0-0.85 nmol N hr-1L-1 for Farmington Bay, and these rates positively correlated with the abundance and expressions of the nif gene. In addition, nitrate reduction was measured in sediment (0.002-0.094 mg N VSS-1 hr-1). Significantly positive correlations were found among amoA, nirS and nirK abundance (R = 0.56-0.87, p < 0.05, Spearman) in both lakes. An exception was the lower nirK gene abundance detected at one site in Farmington Bay where high ammonium retentions were also detected. Based on a mass balance approach, we concluded that the amount of inorganic N loss through denitrification still exceeded the N input by N2-fixation, much like in most lakes, rivers, and marine ecosystems. This indicates that N cycling processes such as denitrification mediated by heterotrophic bacteria contributes to N-export from the lakes resulting in N limitations.
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Affiliation(s)
- Hanyan Li
- Department of Civil and Environmental Engineering, The University of Utah, 110 S Central Campus Drive, Salt Lake City, UT, 84112, USA
| | - Theron Miller
- Wasatch Front Water Quality Council, Salt Lake City, UT, USA
| | - Jingrang Lu
- United States Environmental Protection Agency, Office of Research and Development, Cincinnati, OH, USA.
| | - Ramesh Goel
- Department of Civil and Environmental Engineering, The University of Utah, 110 S Central Campus Drive, Salt Lake City, UT, 84112, USA.
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Koksharova OA, Safronov NA. The effects of secondary bacterial metabolites on photosynthesis in microalgae cells. Biophys Rev 2022; 14:843-856. [PMID: 36124259 PMCID: PMC9481811 DOI: 10.1007/s12551-022-00981-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Accepted: 07/04/2022] [Indexed: 12/26/2022] Open
Abstract
Secondary metabolites of bacteria are regulatory molecules that act as "info-chemicals" that control some metabolic processes in the cells of microorganisms. These molecules provide the function of bacteria communication in microbial communities. As primary producers of organic matter in the biosphere, microalgae play a central ecological role in various ecosystems. Photosynthesis is a central process in microalgae cells, and it is exposed to various biotic and abiotic factors. Various secondary metabolites of bacteria confer a noticeable regulatory effect on photosynthesis in microalgae cells. The main purpose of this review is to highlight recent experimental results that demonstrate the impact of several types of common bacterial metabolites (volatile organic compounds, non-protein amino acids, and peptides) on photosynthetic activity in cells of microalgae. The use of these molecules as herbicides can be of great importance both for practical applications and for basic research.
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Affiliation(s)
- O. A. Koksharova
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Leninskie Gory, 1-40, 119991 Moscow, Russia
- Institute of Molecular Genetics of National Research Center, Kurchatov Institute”, Kurchatov Square, 2, 123182 Moscow, Russia
| | - N. A. Safronov
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Leninskie Gory, 1-40, 119991 Moscow, Russia
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Use of Biostimulants as a New Approach for the Improvement of Phytoremediation Performance—A Review. PLANTS 2022; 11:plants11151946. [PMID: 35893650 PMCID: PMC9332818 DOI: 10.3390/plants11151946] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Revised: 07/16/2022] [Accepted: 07/20/2022] [Indexed: 11/23/2022]
Abstract
Environmental pollution is one of the most pressing global issues, and it requires priority attention. Environmental remediation techniques have been developed over the years and can be applied to polluted sites, but they can have limited effectiveness and high energy consumption and costs. Bioremediation techniques, on the other hand, represent a promising alternative. Among them, phytoremediation is attracting particular attention, a green methodology that relies on the use of plant species to remediate contaminated sites or prevent the dispersion of xenobiotics into the environment. In this review, after a brief introduction focused on pollution and phytoremediation, the use of plant biostimulants (PBs) in the improvement of the remediation effectiveness is proposed. PBs are substances widely used in agriculture to raise crop production and resistance to various types of stress. Recent studies have also documented their ability to counteract the deleterious effects of pollutants on plants, thus increasing the phytoremediation efficiency of some species. The works published to date, reviewed and discussed in the present work, reveal promising prospects in the remediation of polluted environments, especially for heavy metals, when PBs derived from humic substances, protein and amino acid hydrolysate, inorganic salts, microbes, seaweed, plant extracts, and fungi are employed.
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Roslan MAM, Sobri ZM, Zuan ATK, Abdul Rahman NA. Okra Growth, Yield and Rhizosphere Microbiome Responses to the Encapsulated Bioinoculant Application under Reduced Fertilization Regime. BIOLOGY 2022; 11:biology11081107. [PMID: 35892963 PMCID: PMC9332871 DOI: 10.3390/biology11081107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 07/21/2022] [Accepted: 07/22/2022] [Indexed: 11/30/2022]
Abstract
There is limited evidence that Enterobacter hormaechei can improve plant physiology and yield through soil phosphate (P) and potassium (K) amelioration. This study unraveled the effect of different soil inoculation methods i.e., free-cell and encapsulated (alginate bead containing sugar-protein hydrolysate and molasses) E. hormaechei 40a with different rates of PK-fertilization on okra P and K uptake, and soil rhizosphere bacterial community. The results revealed that 3HB (half-dose PK-fertilizer + encapsulated strain 40a) had the highest soil available P (SAP) and K (SAK), as well as P and K uptake for all plant organs, followed by 3F (full-dose PK-fertilizer), 3HI (half-dose PK-fertilizer + free-cell strain 40a), and 3H (half-dose PK-fertilizer), and improved yield by up to 75.6%. Both inoculated and full-dose fertilizer treatments produced larger pods (>15 cm) compared to 3H. We discovered increased bacterial richness and diversity in both 3HB and 3HI samples compared to uninoculated treatments. Both 3HB and 3F treatments were positively correlated with the increasing abundance of Acidobacteriales, Burkholderia caballeronia paraburkholderia, Gemmataceae, and Sphingomonas along with the SAP and SAK. The plant-beneficial effect of one-time 3HB treatment on okra growth and yield was comparable to biweekly inoculation in 3HI, suggesting a new cost-effective farming approach in precision agriculture.
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Affiliation(s)
- Muhamad Aidilfitri Mohamad Roslan
- Department of Bioprocess Technology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Selangor, Malaysia;
- Correspondence: (M.A.M.R.); (N.A.A.R.)
| | - Zulfazli M. Sobri
- Department of Bioprocess Technology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Selangor, Malaysia;
| | - Ali Tan Kee Zuan
- Department of Land Management, Faculty of Agriculture, Universiti Putra Malaysia, Serdang 43400, Selangor, Malaysia;
| | - Nor Aini Abdul Rahman
- Department of Bioprocess Technology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Selangor, Malaysia;
- Correspondence: (M.A.M.R.); (N.A.A.R.)
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Velmurugan R, Incharoensakdi A. Metabolic transformation of cyanobacteria for biofuel production. CHEMOSPHERE 2022; 299:134342. [PMID: 35307390 DOI: 10.1016/j.chemosphere.2022.134342] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2021] [Revised: 03/11/2022] [Accepted: 03/14/2022] [Indexed: 06/14/2023]
Abstract
World-wide, an emerging demand is moving towards the biofuels to replace the fossil fuels. In alternative biofuel production strategies, cyanobacteria have unique characteristic of accumulating glycogen, lipid, and fuel molecules through natural mechanisms. Moreover, the cyanobacteria can be easily engineered to synthesis a plenty of fuel molecules from CO2. To obtain the fuel molecule from cyanobacteria, various techniques were invented in which the metabolic engineering is found to be a prerequisite to develop an economically feasible process. The expression of indigenous or heterologous pathways plays an important role in developing successful production process. In addition, the engineering of photosynthetic apparatus, destruction of competitive pathways and improvement of tolerance were also proven to improve the product specific synthesis. Although various metabolic engineering approaches have been developed, there are certain obstacles when it comes to implementation for the production. In this review, the important biosynthetic pathways for biofuels, alteration of other genes to improve the actual pathway and possibilities of developing cyanobacterial fuel production have been elaborated.
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Affiliation(s)
- Rajendran Velmurugan
- Cyanobacterial Biotechnology Laboratory, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
| | - Aran Incharoensakdi
- Cyanobacterial Biotechnology Laboratory, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand; Academy of Science, Royal Society of Thailand, Bangkok, 10300, Thailand.
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