1
|
Khemkhao M, Domrongpokkaphan V, Nuchdang S, Phalakornkule C. Chemical and biological effects of zero-valent iron (ZVI) concentration on in-situ production of H 2 from ZVI and bioconversion of CO 2 into CH 4 under anaerobic conditions. ENVIRONMENTAL RESEARCH 2024; 256:119230. [PMID: 38810832 DOI: 10.1016/j.envres.2024.119230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2024] [Revised: 05/18/2024] [Accepted: 05/24/2024] [Indexed: 05/31/2024]
Abstract
The conversion of carbon dioxide (CO2) to methane (CH4) is a strategy for sequestering CO2. Zero-valent iron (ZVI) has been proposed as an alternative electron donor for the CO2 reduction to CH4. In this study, the effects of ZVI concentrations on the abiotic production of H2 (without the action of microorganisms) in the first part and on the biological conversion of CO2 to CH4 using ZVI as a direct electron donor in the second part were examined. In the abiotic H2 production, the increase in the ZVI concentration from 16 to 32, 64, and 96 g/L was found to have positive effects on both the amounts of H2 generated and the rates of H2 production because the extent of ZVI oxidation positively correlates with increasing surface area. Nevertheless, the increase in ZVI concentration from 96 to 224 g/L did not benefit the H2 production because the ZVI dissolution was suppressed by the increasing aqueous pH above 10. In the bioconversion of CO2 to CH4 using ZVI as an electron donor, the main methanogenesis pathway occurred via hydrogenotrophic methanogenesis at pH 8.7-9.5 driven by the genus Methanobacterium of the class Methanobacteria. At ZVI concentrations of 64 g/L and above, the production of volatile fatty acid (VFA) became clear. Acetate was the main VFA, indicating the induction of homoacetogenesis at ZVI concentrations of 64 g/L and above. In addition, the presence of propionate as the second major VFA suggests the production of propionate from CO2 and acetate under conditions with high H2 partial pressure. The results indicated that the pathway for ZVI/CO2 conversion to CH4 was competitive between hydrogenotrophic methanogenesis and homoacetogenesis.
Collapse
Affiliation(s)
- Maneerat Khemkhao
- Rattanakosin College for Sustainable Energy and Environment, Rajamangala University of Technology Rattanakosin, Nakhon Pathom, 73170, Thailand; Microbial Informatics and Industrial Product of Microbe Research Center, King Mongkut's University of Technology North Bangkok, Bangkok, 10800, Thailand.
| | - Vichai Domrongpokkaphan
- Microbial Informatics and Industrial Product of Microbe Research Center, King Mongkut's University of Technology North Bangkok, Bangkok, 10800, Thailand; Department of Agro-Industrial, Food and Environmental Technology, King Mongkut's University of Technology North Bangkok, Bangkok, 10800, Thailand
| | - Sasikarn Nuchdang
- Research and Development Division, Thailand Institute of Nuclear Technology, Pathumthani, Thailand
| | - Chantaraporn Phalakornkule
- Department of Chemical Engineering, Faculty of Engineering, King Mongkut's University of Technology North Bangkok, Bangkok, 10800, Thailand; Research Center for Circular Products and Energy, King Mongkut's University of Technology North Bangkok, Bangkok, 10800, Thailand
| |
Collapse
|
2
|
Chen B, Azman S, Crauwels S, Dewil R, Appels L. Mild alkaline conditions affect digester performance and community dynamics during long-term exposure. BIORESOURCE TECHNOLOGY 2024; 406:131009. [PMID: 38909869 DOI: 10.1016/j.biortech.2024.131009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Revised: 06/06/2024] [Accepted: 06/16/2024] [Indexed: 06/25/2024]
Abstract
This paper examines the adaptive responses of microbial communities to gradual shifts in pH toward the mild alkaline range in anaerobic digestion (AD) systems. The results indicate that a pH of 8.0 serves as a critical upper limit for stable AD operation, beyond which microbial efficiency declines, underscoring the importance of microbial resilience against elevated pH stress. Specifically, hydrolysis genera, e.g. Eubacterium and Anaerobacterium, and syntrophic bacteria were crucial for reactor stability. Fibrobacter had also been shown to play a key role in the accumulation of propionate, thus leading to its dominance in the volatile fatty acid profile throughout the experimental phases. Overall, this investigation revealed the potential adaptability of microbial communities in AD systems to mild alkaline pH shifts, emphasizing the hydrolysis bacteria and syntrophic bacteria as key factors for maintaining metabolic function in elevated pH conditions.
Collapse
Affiliation(s)
- Boyang Chen
- KU Leuven, Department of Chemical Engineering, Process and Environmental Technology Lab, Jan Pieter De Nayerlaan 5, B-2860 Sint-Katelijne-Waver, Belgium
| | - Samet Azman
- Avans University of Applied Sciences, Academy of Life Sciences and Technology, Lovensdijk 61, 4818 AJ Breda, Netherlands
| | - Sam Crauwels
- KU Leuven, Department of Microbial and Molecular Systems (M(2)S), Centre of Microbial and Plant Genetics, Willem de Croylaan 46, 3001 Leuven, Belgium
| | - Raf Dewil
- KU Leuven, Department of Chemical Engineering, Process and Environmental Technology Lab, Jan Pieter De Nayerlaan 5, B-2860 Sint-Katelijne-Waver, Belgium
| | - Lise Appels
- KU Leuven, Department of Chemical Engineering, Process and Environmental Technology Lab, Jan Pieter De Nayerlaan 5, B-2860 Sint-Katelijne-Waver, Belgium.
| |
Collapse
|
3
|
Xu H, Miao J, Wang J, Deng J, Zhang J, Kou Q, Xiong X, Holmes DE. Integrated CO 2 capture and conversion via H 2-driven CO 2 biomethanation: Cyclic performance and microbial community response. BIORESOURCE TECHNOLOGY 2024; 393:130055. [PMID: 37995871 DOI: 10.1016/j.biortech.2023.130055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2023] [Revised: 11/16/2023] [Accepted: 11/16/2023] [Indexed: 11/25/2023]
Abstract
This study investigated the use of H2-driven CO2 biomethanation for integrated CO2 capture and conversion (iCCC). Anaerobic chambers containing Na2CO3-amended microbial growth medium provided with H2 were inoculated with anaerobic granular sludge. Microorganisms were enriched that could regenerate carbonate by using the bicarbonate formed from CO2 absorption to generate methane. Multiple absorption-regeneration cycles were performed and effective restoration of CO2 absorption capacity and stable carbonate recycling via CO2 biomethanation were observed for CO2 absorbents adjusted to three different pH values (9.0, 9.5, and 10.0). The pH = 10.0 group had the highest CO2 absorption capacity; 65.3 mmol/L in the 5th cycle. A slight alkaline inhibition of acetoclastic methanogenesis occurred near the end of regeneration, but had limited impact on the cyclic performance of the iCCC process. Microbial communities were dominated by H2-utilizing and alkali-tolerant species that could participate in CO2 biomethanation and survive under alternating neutral and alkaline conditions.
Collapse
Affiliation(s)
- Heng Xu
- School of Chemical & Environmental Engineering, China University of Mining & Technology-Beijing, Beijing 100083, China
| | - Jiahui Miao
- School of Chemical & Environmental Engineering, China University of Mining & Technology-Beijing, Beijing 100083, China
| | - Jianbing Wang
- School of Chemical & Environmental Engineering, China University of Mining & Technology-Beijing, Beijing 100083, China
| | - Jiushuai Deng
- School of Chemical & Environmental Engineering, China University of Mining & Technology-Beijing, Beijing 100083, China
| | - Jiayin Zhang
- School of Chemical & Environmental Engineering, China University of Mining & Technology-Beijing, Beijing 100083, China
| | - Qingshuang Kou
- School of Chemical & Environmental Engineering, China University of Mining & Technology-Beijing, Beijing 100083, China
| | - Xia Xiong
- Key Laboratory of Development and Application of Rural Renewable Energy, Ministry of Agriculture and Rural Affairs, Chengdu 610041, China.
| | - Dawn E Holmes
- Department of Physical and Biological Sciences, Western New England University, 1215 Wilbraham Road, Springfield, MA 01119, United States
| |
Collapse
|
4
|
Gregory SP, Mackie JRM, Barnett MJ. Radioactive waste microbiology: predicting microbial survival and activity in changing extreme environments. FEMS Microbiol Rev 2024; 48:fuae001. [PMID: 38216518 PMCID: PMC10853057 DOI: 10.1093/femsre/fuae001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 12/01/2023] [Accepted: 01/11/2024] [Indexed: 01/14/2024] Open
Abstract
The potential for microbial activity to occur within the engineered barrier system (EBS) of a geological disposal facility (GDF) for radioactive waste is acknowledged by waste management organizations as it could affect many aspects of the safety functions of a GDF. Microorganisms within an EBS will be exposed to changing temperature, pH, radiation, salinity, saturation, and availability of nutrient and energy sources, which can limit microbial survival and activity. Some of the limiting conditions are incorporated into GDF designs for safety reasons, including the high pH of cementitious repositories, the limited pore space of bentonite-based repositories, or the high salinity of GDFs in evaporitic geologies. Other environmental conditions such as elevated radiation, temperature, and desiccation, arise as a result of the presence of high heat generating waste (HHGW). Here, we present a comprehensive review of how environmental conditions in the EBS may limit microbial activity, covering HHGW and lower heat generating waste (LHGW) in a range of geological environments. We present data from the literature on the currently recognized limits to life for each of the environmental conditions described above, and nutrient availability to establish the potential for life in these environments. Using examples where each variable has been modelled for a particular GDF, we outline the times and locations when that variable can be expected to limit microbial activity. Finally, we show how this information for multiple variables can be used to improve our understanding of the potential for microbial activity to occur within the EBS of a GDF and, more broadly, to understand microbial life in changing environments exposed to multiple extreme conditions.
Collapse
Affiliation(s)
- Simon P Gregory
- British Geological Survey, Nicker Hill, Keyworth, Nottingham NG12 5GG, United Kingdom
| | - Jessica R M Mackie
- British Geological Survey, Nicker Hill, Keyworth, Nottingham NG12 5GG, United Kingdom
| | - Megan J Barnett
- British Geological Survey, Nicker Hill, Keyworth, Nottingham NG12 5GG, United Kingdom
| |
Collapse
|
5
|
Khomyakova MA, Merkel AY, Slobodkin AI, Sorokin DY. Phenotypic and genomic characterization of the first alkaliphilic aceticlastic methanogens and proposal of a novel genus Methanocrinis gen.nov. within the family Methanotrichaceae. Front Microbiol 2023; 14:1233691. [PMID: 37886072 PMCID: PMC10598746 DOI: 10.3389/fmicb.2023.1233691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 09/12/2023] [Indexed: 10/28/2023] Open
Abstract
Highly purified cultures of alkaliphilic aceticlastic methanogens were collected for the first time using methanogenic enrichments with acetate from a soda lake and a terrestrial mud volcano. The cells of two strains were non-motile rods forming filaments. The mud volcano strain M04Ac was alkalitolerant, with the pH range for growth from 7.5 to 10.0 (optimum at 9.0), while the soda lake strain Mx was an obligate alkaliphile growing in the pH range 7.7-10.2 (optimum 9.3-9.5) in the presence of optimally 0.2-0.3 M total Na+. Genomes of both strains encoded all enzymes required for aceticlastic methanogenesis and different mechanisms of (halo)alkaline adaptations, including ectoine biosynthesis, which is the first evidence for the formation of this osmoprotectant in archaea. According to 16S rRNA gene phylogeny, the strains possessed 98.3-98.9% sequence identity and belonged to the obligately aceticlastic genus Methanothrix with M. harundinaceae as the most closely related species. However, a more advanced phylogenomic reconstruction based on 122 conserved single-copy archaeal protein-coding marker genes clearly indicated a polyphyletic origin of the species included in the genus Methanothrix. We propose to reclassify Methanothrix harrundinacea (type strain 8AcT) into a new genus, Methanocrinis gen. nov., with the type species Methanocrinis harrundinaceus comb. nov. We also propose under SeqCode the complete genome sequences of strain MxTs (GCA_029167045.1) and strain M04AcTs (GCA_029167205.1) as nomenclatural types of Methanocrinis natronophilus sp. nov. and Methanocrinis alkalitolerans sp. nov., respectively, which represent other species of the novel genus. This work demonstrates that the low energy aceticlastic methanogenesis may function at extreme conditions present in (halo)alkaline habitats.
Collapse
Affiliation(s)
- Maria A. Khomyakova
- Winogradsky Institute of Microbiology, FRC Biotechnology Russian Academy of Sciences, Moscow, Russia
| | - Alexander Y. Merkel
- Winogradsky Institute of Microbiology, FRC Biotechnology Russian Academy of Sciences, Moscow, Russia
| | - Alexander I. Slobodkin
- Winogradsky Institute of Microbiology, FRC Biotechnology Russian Academy of Sciences, Moscow, Russia
| | - Dimitry Y. Sorokin
- Winogradsky Institute of Microbiology, FRC Biotechnology Russian Academy of Sciences, Moscow, Russia
- Department of Biotechnology, Delft University of Technology, Delft, Netherlands
| |
Collapse
|
6
|
Yang G, Zheng Z, Abbott BW, Olefeldt D, Knoblauch C, Song Y, Kang L, Qin S, Peng Y, Yang Y. Characteristics of methane emissions from alpine thermokarst lakes on the Tibetan Plateau. Nat Commun 2023; 14:3121. [PMID: 37253726 DOI: 10.1038/s41467-023-38907-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 05/18/2023] [Indexed: 06/01/2023] Open
Abstract
Understanding methane (CH4) emission from thermokarst lakes is crucial for predicting the impacts of abrupt thaw on the permafrost carbon-climate feedback. However, observational evidence, especially from high-altitude permafrost regions, is still scarce. Here, by combining field surveys, radio- and stable-carbon isotopic analyses, and metagenomic sequencing, we present multiple characteristics of CH4 emissions from 120 thermokarst lakes in 30 clusters along a 1100 km transect on the Tibetan Plateau. We find that thermokarst lakes have high CH4 emissions during the ice-free period (13.4 ± 1.5 mmol m-2 d-1; mean ± standard error) across this alpine permafrost region. Ebullition constitutes 84% of CH4 emissions, which are fueled primarily by young carbon decomposition through the hydrogenotrophic pathway. The relative abundances of methanogenic genes correspond to the observed CH4 fluxes. Overall, multiple parameters obtained in this study provide benchmarks for better predicting the strength of permafrost carbon-climate feedback in high-altitude permafrost regions.
Collapse
Affiliation(s)
- Guibiao Yang
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Zhihu Zheng
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Benjamin W Abbott
- Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, 84602, USA
| | - David Olefeldt
- Department of Renewable Resources, University of Alberta, Edmonton, Alberta, T6G 2H1, Canada
| | | | - Yutong Song
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Luyao Kang
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Shuqi Qin
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yunfeng Peng
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yuanhe Yang
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
- University of Chinese Academy of Sciences, Beijing, 100049, China.
| |
Collapse
|
7
|
Duan X, Luo J, Su Y, Liu C, Feng L, Chen Y. Proteomic profiling of robust acetoclastic methanogen in chrysene-altered anaerobic digestion: Global dissection of enzymes. WATER RESEARCH 2023; 233:119817. [PMID: 36871384 DOI: 10.1016/j.watres.2023.119817] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Revised: 02/20/2023] [Accepted: 02/25/2023] [Indexed: 06/18/2023]
Abstract
Methanogen is a pivotal player in pollution treatment and energy recovery, and emerging pollutants (EPs) frequently occur in methanogen-applied biotechnology such as anaerobic digestion (AD). However, the direct effect and underlying mechanism of EPs on crucial methanogen involved in its application still remain unclear. The positive effect of chrysene (CH) on semi-continuous AD of sludge and the robust methanogen was dissected in this study. The methane yield in the digester with CH (100 mg/kg dry sludge) was 62.1 mL/g VS substrate, much higher than that in the control (46.1 mL/g VS substrate). Both methane production from acetoclastic methanogenesis (AM) and the AM proportion in the methanogenic pathway were improved in CH-shaped AD. Acetoclastic consortia, especially Methanosarcina and functional profiles of AM were enriched by CH in favor of the corresponding methanogenesis. Further, based on pure cultivation exposed to CH, the methanogenic performance, biomass, survivability and activity of typical Methanosarcina (M. barkeri) were boosted. Notably, iTRAQ proteomics revealed that the manufacturing (transcription and translation), expression and biocatalytic activity of acetoclastic metalloenzymes, particularly tetrahydromethanopterin S-methyltransferase and methyl-coenzyme M reductase with cobalt/nickel-cofactor (F430 and cobalamin), and acetyl-CoA decarbonylase/synthase with cobalt/nickel-active site, of M. barkeri were upregulated significantly with fold changes in the range of 1.21-3.20 due to the CH presence. This study shed light on EPs-affecting industrially crucial methanogen at the molecular biology level during AD and had implications in the technical relevance of methanogens.
Collapse
Affiliation(s)
- Xu Duan
- State Key Laboratory of Pollution Control and Resources Reuse, School of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, China
| | - Jingyang Luo
- College of Environment, Hohai University, 1 Xikang Road, Nanjing 210098, China
| | - Yu Su
- State Key Laboratory of Pollution Control and Resources Reuse, School of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, China
| | - Chao Liu
- State Key Laboratory of Pollution Control and Resources Reuse, School of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, China
| | - Leiyu Feng
- State Key Laboratory of Pollution Control and Resources Reuse, School of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China.
| | - Yinguang Chen
- State Key Laboratory of Pollution Control and Resources Reuse, School of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China
| |
Collapse
|
8
|
Maamri S, Moussa A, Yacine M. Development of a Statistical Model to Predict Methane Production from Waste Activated Sludge Co-Digested with Olive Mill Wastewater and Cattle Dung by Response Surface Methodology. CHEMISTRY & CHEMICAL TECHNOLOGY 2023. [DOI: 10.23939/chcht17.01.141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
Abstract
Nowadays, population growth is likely to lead to a wide variety of biomass wastes generation from the diversified human, industrial, and agricultural activities. Anaerobic digestion is mostly applied to manage biomass wastes and mitigate a huge spectrum of environmental damages. This paper aims to enhance the anaerobic digestion efficiency of multicomponent substrates, using a mixture of waste activated sludge (WAS), olive mill wastewater (OMW), and cattle manure (CM). A Response Surface Methodology is employed in experimental design to determine individual and interactive effects on methane yield and chemical oxygen demand reduction. After numerical optimization using Design Expert®, the optimum values of the test factors in actual were as follows: initial pH = 8, COD/N ratio = 47, 42, CM/WAS-OMW ratio = 0.352, TS = 42.94 g/L. The obtained results indicate that anaerobic co-digestion performance could be achieved by optimising substrate composition to assure a larger microbial synergistic effect.
Collapse
|
9
|
Li Y, He C, Dong F, Yuan S, Hu Z, Wang W. Performance of anaerobic digestion of phenol using exogenous hydrogen and granular activated carbon and analysis of microbial community. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:45077-45087. [PMID: 36701053 DOI: 10.1007/s11356-023-25275-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 01/08/2023] [Indexed: 06/17/2023]
Abstract
Anaerobic conversion rate of phenol to methane was low due to its biological toxicity. In this study, the coupling of granular activated carbon (GAC) and exogenous hydrogen (EH) could enhance greatly methane production of phenol anaerobic digestion, and the metagenomic was firstly used to analyze its potential mechanism. The results indicated that a mass of syntrophic acetate-oxidizing bacteria and hydrogen-utilizing methanogens were enriched on the GAC surface, and SAO-HM pathway has become the dominant pathway. The energy transfer analysis implied that the abundance of adenosine triphosphate (ATP) and nicotinamide adenine dinucleotide (NADH) oxidase increased. Furthermore, direct interspecies electron transfer (DIET) was formed by promoting type IV e-pili between Methanobacterium and Syntrophus, thereby improving the interspecies electron transfer efficiency. The dominant SAO-HM pathway was induced and DIET was formed, which was the internal mechanism of the coupling of GAC and EH to enhance anaerobic biotransformation of phenol.
Collapse
Affiliation(s)
- Yongcun Li
- Department of Municipal Engineering, School of Civil Engineering, Hefei University of Technology, Hefei, 230009, China
- Anhui Provincial Engineering Laboratory for Rural Water Environment and Resources, Hefei, 230009, China
- Anhui Province Key Laboratory of Industrial Wastewater and Environmental Treatment, Hefei, 230024, China
| | - Chunhua He
- Anhui Provincial Engineering Laboratory for Rural Water Environment and Resources, Hefei, 230009, China
- Anhui Province Key Laboratory of Industrial Wastewater and Environmental Treatment, Hefei, 230024, China
- Department of Municipal Engineering, School of Environment and Energy Engineering, Anhui JianZhu University, Hefei, 230009, China
| | - Fang Dong
- Department of Municipal Engineering, School of Civil Engineering, Hefei University of Technology, Hefei, 230009, China
- Anhui Provincial Engineering Laboratory for Rural Water Environment and Resources, Hefei, 230009, China
- Anhui Province Key Laboratory of Industrial Wastewater and Environmental Treatment, Hefei, 230024, China
| | - Shoujun Yuan
- Department of Municipal Engineering, School of Civil Engineering, Hefei University of Technology, Hefei, 230009, China
- Anhui Provincial Engineering Laboratory for Rural Water Environment and Resources, Hefei, 230009, China
- Anhui Province Key Laboratory of Industrial Wastewater and Environmental Treatment, Hefei, 230024, China
| | - Zhenhu Hu
- Department of Municipal Engineering, School of Civil Engineering, Hefei University of Technology, Hefei, 230009, China
- Anhui Provincial Engineering Laboratory for Rural Water Environment and Resources, Hefei, 230009, China
- Anhui Province Key Laboratory of Industrial Wastewater and Environmental Treatment, Hefei, 230024, China
| | - Wei Wang
- Department of Municipal Engineering, School of Civil Engineering, Hefei University of Technology, Hefei, 230009, China.
- Anhui Provincial Engineering Laboratory for Rural Water Environment and Resources, Hefei, 230009, China.
- Anhui Province Key Laboratory of Industrial Wastewater and Environmental Treatment, Hefei, 230024, China.
| |
Collapse
|
10
|
Khesali Aghtaei H, Püttker S, Maus I, Heyer R, Huang L, Sczyrba A, Reichl U, Benndorf D. Adaptation of a microbial community to demand-oriented biological methanation. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2022; 15:125. [PMID: 36384582 PMCID: PMC9670408 DOI: 10.1186/s13068-022-02207-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 10/01/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND Biological conversion of the surplus of renewable electricity and carbon dioxide (CO2) from biogas plants to biomethane (CH4) could support energy storage and strengthen the power grid. Biological methanation (BM) is linked closely to the activity of biogas-producing Bacteria and methanogenic Archaea. During reactor operations, the microbiome is often subject to various changes, e.g., substrate limitation or pH-shifts, whereby the microorganisms are challenged to adapt to the new conditions. In this study, various process parameters including pH value, CH4 production rate, conversion yields and final gas composition were monitored for a hydrogenotrophic-adapted microbial community cultivated in a laboratory-scale BM reactor. To investigate the robustness of the BM process regarding power oscillations, the biogas microbiome was exposed to five hydrogen (H2)-feeding regimes lasting several days. RESULTS Applying various "on-off" H2-feeding regimes, the CH4 production rate recovered quickly, demonstrating a significant resilience of the microbial community. Analyses of the taxonomic composition of the microbiome revealed a high abundance of the bacterial phyla Firmicutes, Bacteroidota and Thermotogota followed by hydrogenotrophic Archaea of the phylum Methanobacteriota. Homo-acetogenic and heterotrophic fermenting Bacteria formed a complex food web with methanogens. The abundance of the methanogenic Archaea roughly doubled during discontinuous H2-feeding, which was related mainly to an increase in acetoclastic Methanothrix species. Results also suggested that Bacteria feeding on methanogens could reduce overall CH4 production. On the other hand, using inactive biomass as a substrate could support the growth of methanogenic Archaea. During the BM process, the additional production of H2 by fermenting Bacteria seemed to support the maintenance of hydrogenotrophic methanogens at non-H2-feeding phases. Besides the elusive role of Methanothrix during the H2-feeding phases, acetate consumption and pH maintenance at the non-feeding phase can be assigned to this species. CONCLUSIONS Taken together, the high adaptive potential of microbial communities contributes to the robustness of BM processes during discontinuous H2-feeding and supports the commercial use of BM processes for energy storage. Discontinuous feeding strategies could be used to enrich methanogenic Archaea during the establishment of a microbial community for BM. Both findings could contribute to design and improve BM processes from lab to pilot scale.
Collapse
Grants
- 031A532B, 031A533A, 031A533B, 031A534A, 031A535A, 031A537A, 031A537B, 031A537C, 031A537D, 031A538A, 031L0103 Bundesministerium für Bildung und Forschung
- 031A532B, 031A533A, 031A533B, 031A534A, 031A535A, 031A537A, 031A537B, 031A537C, 031A537D, 031A538A, 031L0103 Bundesministerium für Bildung und Forschung
- 031A532B, 031A533A, 031A533B, 031A534A, 031A535A, 031A537A, 031A537B, 031A537C, 031A537D, 031A538A, 031L0103 Bundesministerium für Bildung und Forschung
- 031A532B, 031A533A, 031A533B, 031A534A, 031A535A, 031A537A, 031A537B, 031A537C, 031A537D, 031A538A, 031L0103 Bundesministerium für Bildung und Forschung
- 031A532B, 031A533A, 031A533B, 031A534A, 031A535A, 031A537A, 031A537B, 031A537C, 031A537D, 031A538A, 031L0103 Bundesministerium für Bildung und Forschung
- European Regional Development Fund
- Max Planck Institute for Dynamics of Complex Technical Systems (MPI Magdeburg) (2)
Collapse
Affiliation(s)
- Hoda Khesali Aghtaei
- Bioprocess Engineering, Max Planck Institute for Dynamics of Complex Technical Systems, Sandtorstraße 1, 39106, Magdeburg, Germany
- Bioprocess Engineering, Otto Von Guericke University Magdeburg, Universitätsplatz 2, 39106, Magdeburg, Germany
| | - Sebastian Püttker
- Bioprocess Engineering, Max Planck Institute for Dynamics of Complex Technical Systems, Sandtorstraße 1, 39106, Magdeburg, Germany
- Bioprocess Engineering, Otto Von Guericke University Magdeburg, Universitätsplatz 2, 39106, Magdeburg, Germany
| | - Irena Maus
- Center for Biotechnology (CeBiTec), Genome Research of Industrial Microorganisms, Bielefeld University, Universitätsstraße 27, 33615, Bielefeld, Germany
- Institute for Bio- and Geosciences (IBG-5), Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Straße, 52428, Jülich, Germany
| | - Robert Heyer
- Database and Software Engineering Group, Otto Von Guericke University Magdeburg, Universitätsplatz 2, 39106, Magdeburg, Germany
- Faculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany
- Multidimensional Omics Analyses group, Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Bunsen-Kirchhoff-Straße 11, 44139, Dortmund, Germany
| | - Liren Huang
- Faculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany
| | - Alexander Sczyrba
- Faculty of Technology and Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany
| | - Udo Reichl
- Bioprocess Engineering, Max Planck Institute for Dynamics of Complex Technical Systems, Sandtorstraße 1, 39106, Magdeburg, Germany
- Bioprocess Engineering, Otto Von Guericke University Magdeburg, Universitätsplatz 2, 39106, Magdeburg, Germany
| | - Dirk Benndorf
- Bioprocess Engineering, Max Planck Institute for Dynamics of Complex Technical Systems, Sandtorstraße 1, 39106, Magdeburg, Germany.
- Bioprocess Engineering, Otto Von Guericke University Magdeburg, Universitätsplatz 2, 39106, Magdeburg, Germany.
- Applied Biosciences and Process Engineering, Anhalt University of Applied Sciences, Bernburger Straße 55, Postfach 1458, 06366, Köthen, Germany.
| |
Collapse
|
11
|
Li J, Akinyemi TS, Shao N, Chen C, Dong X, Liu Y, Whitman WB. Genetic and Metabolic Engineering of Methanococcus spp. CURRENT RESEARCH IN BIOTECHNOLOGY 2022. [DOI: 10.1016/j.crbiot.2022.11.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
|
12
|
Barrett K, Lange L, Børsting CF, Olijhoek DW, Lund P, Meyer AS. Changes in the Metagenome-Encoded CAZymes of the Rumen Microbiome Are Linked to Feed-Induced Reductions in Methane Emission From Holstein Cows. Front Microbiol 2022; 13:855590. [PMID: 35668758 PMCID: PMC9163818 DOI: 10.3389/fmicb.2022.855590] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2022] [Accepted: 04/01/2022] [Indexed: 11/25/2022] Open
Abstract
Enteric methane (CH4) emission from cattle is strongly linked to the feeding regime and the rumen microbial community structure. Here, we report that feed-induced CH4-reducing effects correlate with specific alterations in the profile of the microbiome-encoded carbohydrate-active enzymes predicted from the rumen fluid metagenome. Rumen microbiome samples were obtained by mouth-tube sampling from 12 lactating Holstein cows after 3-4 weeks of feeding with three different concentrate-to-forage-ratio diets, i.e., standard, high, and extremely high levels of concentrate (4 cows per group; constant dry matter intake in the three groups). Increased inclusion of concentrate involved increased starch levels in the diet at the expense of fiber. The extreme diet resulted in 48% reduction of the CH4 emission per kg dry matter intake compared to the standard diet. From metagenome sequencing of the rumen fluid samples from each cow, 561 different microbial strains (bins) could be derived from analysis of 260 billion DNA base pairs. In the cows fed, the extreme diet, the relative abundance of the majority of the bins, was significantly altered compared to the other groups. Fibrobacterota and Verrucomicrobiota were less abundant in the Extreme group. Surprisingly, no significant abundance changes were observed among Archaea and Bacteroidota, although abundance changes of individual bins of these phyla were found. For each of the 561 bins, the functions of the metagenome-encoded carbohydrate-active enzymes were predicted by bioinformatics using conserved unique peptide pattern (CUPP) analysis. By linking each of the predicted molecular functions of the enzymes to their substrates, changes were found in the predicted abundance of the different enzyme types. Notably, the decreased CH4 emission of the extreme diet group was concurrent with a profound decrease in the xylan-active enzymes, targeting the xylan backbone β-1,4-linkages, acetyl-, feruloyl-, and methyl-glucuronoyl substitutions in xylan. This work provides a first enzyme-conversion-based characterization of how extreme feeding, i.e., lowered forage, can drive rumen microbiome changes that support decreased CH4 emission via a changed carbohydrate-active enzyme profile. The data, furthermore, provide a metagenome-wide catalog of enzymes, underpinning the microbial conversion of different feed fibers (the enzymes attacking specific carbohydrate linkages) in the rumen of Holstein cows.
Collapse
Affiliation(s)
- Kristian Barrett
- Protein Chemistry and Enzyme Technology Section, DTU Bioengineering, Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark
| | - Lene Lange
- LLa-BioEconomy, Research & Advisory, Valby, Denmark
| | | | - Dana W. Olijhoek
- Department of Animal Science, AU Foulum, Aarhus University, Tjele, Denmark
| | - Peter Lund
- Department of Animal Science, AU Foulum, Aarhus University, Tjele, Denmark
| | - Anne S. Meyer
- Protein Chemistry and Enzyme Technology Section, DTU Bioengineering, Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark
| |
Collapse
|
13
|
Abstract
Priorities for the exploration of Mars involve the identification and observation of biosignatures that indicate the existence of life on the planet. The atmosphere and composition of the sediments on Mars suggest suitability for anaerobic chemolithotrophic metabolism. Carbonates are often considered as morphological biosignatures, such as stromatolites, but have not been considered as potential electron acceptors. Within the present study, hydrogenotrophic methanogen enrichments were generated from sediments that had received significant quantities of lime from industrial processes (lime kiln/steel production). These enrichments were then supplemented with calcium carbonate powder or marble chips as a sole source of carbon. These microcosms saw a release of inorganic carbon into the liquid phase, which was subsequently removed, resulting in the generation of methane, with 0.37 ± 0.09 mmoles of methane observed in the steel sediment enrichments supplemented with calcium carbonate powder. The steel sediment microcosms and lime sediments with carbonate powder enrichments were dominated by Methanobacterium sp., whilst the lime/marble enrichments were more diverse, containing varying proportions of Methanomassiliicoccus, Methanoculleus and Methanosarcina sp. In all microcosm experiments, acetic acid was detected in the liquid phase. Our results indicate that chemolithotrophic methanogenesis should be considered when determining biosignatures for life on Mars.
Collapse
|
14
|
Lim SS, Fontmorin JM, Ikhmal Salehmin MN, Feng Y, Scott K, Yu EH. Enhancing hydrogen production through anode fed-batch mode and controlled cell voltage in a microbial electrolysis cell fully catalysed by microorganisms. CHEMOSPHERE 2022; 288:132548. [PMID: 34653487 DOI: 10.1016/j.chemosphere.2021.132548] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Revised: 08/26/2021] [Accepted: 10/10/2021] [Indexed: 06/13/2023]
Abstract
A microbial electrolysis cell (MEC) fully catalysed by microorganisms is an attractive technology because it incorporates the state-of-the-art concept of converting organic waste to hydrogen with less external energy input than conventional electrolysers. In this work, the impact of the anode feed mode on the production of hydrogen by the biocathode was studied. In the first part, three feed modes and MEC performance in terms of hydrogen production were evaluated. The results showed the highest hydrogen production under the continuous mode (14.6 ± 0.4), followed by the fed-batch (12.7 ± 0.4) and batch (0 L m-2 cathode day-1) modes. On one hand, the continuous mode only increased by 15% even though the hydraulic retention time (HRT) (2.78 h) was lower than the fed-batch mode (HRT 5 h). A total replacement (fed-batch) rather than a constant mix of existing anolyte and fresh medium (continuous) was preferable. On the other hand, no hydrogen was produced in batch mode due to the extensive HRT (24 h) and bioanode starvation. In the second part, the fed-batch mode was further evaluated using a chronoamperometry method under a range of applied cell voltages of 0.3-1.6 V. Based on the potential evolution at the electrodes, three main regions were identified depending on the applied cell voltages: the cathode activation (<0.8 V), transition (0.8-1.1 V), and anode limitation (>1.1 V) regions. The maximum hydrogen production recorded was 12.1 ± 2.1 L m-2 cathode day-1 at 1.0 V applied voltage when the oxidation and reduction reactions at the anode and cathode were optimal (2.38 ± 0.61 A m-2). Microbial community analysis of the biocathode revealed that Alpha-, and Deltaproteobacteria were dominant in the samples with >70% abundance. At the genus level, Desulfovibrio sp. was the most abundant in the samples, showing that these microbes may be responsible for hydrogen evolution.
Collapse
Affiliation(s)
- Swee Su Lim
- School of Engineering, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom; Fuel Cell Institute, Universiti Kebangsaan Malaysia, 43600, UKM, Bangi, Malaysia
| | - Jean-Marie Fontmorin
- School of Engineering, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom; Univ Rennes, CNRS, ISCR-UMR 6226, F-35000, Rennes, France
| | | | - Yujie Feng
- School of Environment, Harbin Institute of Technology, Harbin, 150090, PR China
| | - Keith Scott
- School of Engineering, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom
| | - Eileen Hao Yu
- School of Engineering, Newcastle University, Newcastle Upon Tyne, NE1 7RU, United Kingdom; Department of Chemical Engineering, Loughborough University, Loughborough, LE11 3TU, United Kingdom.
| |
Collapse
|
15
|
Mechanisms Driving Microbial Community Composition in Anaerobic Co-Digestion of Waste-Activated Sewage Sludge. Bioengineering (Basel) 2021; 8:bioengineering8120197. [PMID: 34940350 PMCID: PMC8699016 DOI: 10.3390/bioengineering8120197] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Revised: 11/23/2021] [Accepted: 11/25/2021] [Indexed: 11/17/2022] Open
Abstract
Anaerobic co-digestion (Co-AD) is used to increase the effectiveness of anaerobic digestion (AD) using local “wastes”, adding economic and environmental benefits. Since system stability is of existential importance for the operation of wastewater treatment plants, thorough testing of potential co-substrates and their effects on the respective community and system performance is crucial for understanding and utilizing Co-AD to its best capacity. Food waste (FW) and canola lecithin (CL) were tested in mesophilic, lab-scale, semi-continuous reactors over a duration of 120 days with stepwise increased substrate addition. Key performance indicators (biogas, total/volatile solids, fatty acids) were monitored and combined with 16S-rRNA amplicon sequencing to assess the impact of co-substrate addition on reactor performance and microbial community composition (MCC). Additionally, the latter was then compared with natural shifts occurring in the wastewater treatment plant (WWTP, source) at the same time. An almost linear increase in biogas production with both co-substrates at an approximate 1:1 ratio with the organic loading rate (OLR) was observed. The MCCs in both experiments were mostly stable, but also prone to drift over time. The FW experiment MCC more closely resembled the original WWTP community and the observed shifts indicated high levels of functional redundancy. Exclusive to the CL co-substrate, a clear selection for a few operational taxonomic units (OTUs) was observed. There was little evidence for a persistent invasion and establishment of microorganisms from typical primary substrates into the stable resident community of the reactors, which is in line with earlier findings that suggested that the inoculum and history mostly define the MCC. However, external factors may still tip the scales in favor of a few r-strategists (e.g., Prolixibacter) in an environment that otherwise favors K-strategists, which may in fact also be recruited from the primary substrate (Trichococcus). In our study, specialization and diversity loss were also observed in response to the addition of the highly specialized CL, which in turn, may have adverse effects on the system’s stability and reduced resilience and recovery.
Collapse
|
16
|
Procaryotic Diversity and Hydrogenotrophic Methanogenesis in an Alkaline Spring (La Crouen, New Caledonia). Microorganisms 2021; 9:microorganisms9071360. [PMID: 34201651 PMCID: PMC8307142 DOI: 10.3390/microorganisms9071360] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 06/17/2021] [Accepted: 06/19/2021] [Indexed: 01/01/2023] Open
Abstract
(1) Background: The geothermal spring of La Crouen (New Caledonia) discharges warm (42 °C) alkaline water (pH~9) enriched in dissolved nitrogen with traces of methane, but its microbial diversity has not yet been studied. (2) Methods: Cultivation-dependent and -independent methods (e.g., Illumina sequencing and quantitative PCR based on 16S rRNA gene) were used to describe the prokaryotic diversity of this spring. (3) Results: Prokaryotes were mainly represented by Proteobacteria (57% on average), followed by Cyanobacteria, Chlorofexi, and Candidatus Gracilibacteria (GN02/BD1-5) (each > 5%). Both potential aerobes and anaerobes, as well as mesophilic and thermophilic microorganisms, were identified. Some of them had previously been detected in continental hyperalkaline springs found in serpentinizing environments (The Cedars, Samail, Voltri, and Zambales ophiolites). Gammaproteobacteria, Ca. Gracilibacteria and Thermotogae were significantly more abundant in spring water than in sediments. Potential chemolithotrophs mainly included beta- and gammaproteobacterial genera of sulfate-reducers (Ca. Desulfobacillus), methylotrophs (Methyloversatilis), sulfur-oxidizers (Thiofaba, Thiovirga), or hydrogen-oxidizers (Hydrogenophaga). Methanogens (Methanobacteriales and Methanosarcinales) were the dominant Archaea, as found in serpentinization-driven and deep subsurface ecosystems. A novel alkaliphilic hydrogenotrophic methanogen (strain CAN) belonging to the genus Methanobacterium was isolated, suggesting that hydrogenotrophic methanogenesis occurs at La Crouen.
Collapse
|