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Dang H, Zhao W, Mattes TE. Metagenomes, metagenome-assembled genomes, and metatranscriptomes from a chlorinated ethene-dechlorinating culture amended with biochar pyrolyzed at different temperatures. Microbiol Resour Announc 2024; 13:e0010424. [PMID: 39109829 PMCID: PMC11385459 DOI: 10.1128/mra.00104-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Accepted: 07/05/2024] [Indexed: 09/11/2024] Open
Abstract
We investigated the effects of biochar and pyrolysis temperature on a chlorinated ethene-dechlorinating anaerobic consortium. Sequencing of nucleic acids from suspended and biochar-attached cells yielded 9 metagenomes, 122 metagenome-assembled genomes, and 18 metatranscriptomes that provide insights into the structure, function, activity, and interactions of the dehalogenating consortium with biochar.
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Affiliation(s)
- Hongyu Dang
- Department of Civil and Environmental Engineering, University of Iowa, Iowa City, Iowa, USA
| | - Weilun Zhao
- Department of Civil and Environmental Engineering, University of Iowa, Iowa City, Iowa, USA
| | - Timothy E Mattes
- Department of Civil and Environmental Engineering, University of Iowa, Iowa City, Iowa, USA
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2
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Song Q, Kong F, Liu BF, Song X, Ren HY. Biochar-based composites for removing chlorinated organic pollutants: Applications, mechanisms, and perspectives. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2024; 21:100420. [PMID: 38765891 PMCID: PMC11099330 DOI: 10.1016/j.ese.2024.100420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Revised: 03/28/2024] [Accepted: 04/02/2024] [Indexed: 05/22/2024]
Abstract
Chlorinated organic pollutants constitute a significant category of persistent organic pollutants due to their widespread presence in the environment, which is primarily attributed to the expansion of agricultural and industrial activities. These pollutants are characterized by their persistence, potent toxicity, and capability for long-range dispersion, emphasizing the importance of their eradication to mitigate environmental pollution. While conventional methods for removing chlorinated organic pollutants encompass advanced oxidation, catalytic oxidation, and bioremediation, the utilization of biochar has emerged as a prominent green and efficacious method in recent years. Here we review biochar's role in remediating typical chlorinated organics, including polychlorinated biphenyls (PCBs), triclosan (TCS), trichloroethene (TCE), tetrachloroethylene (PCE), organochlorine pesticides (OCPs), and chlorobenzenes (CBs). We focus on the impact of biochar material properties on the adsorption mechanisms of chlorinated organics. This review highlights the use of biochar as a sustainable and eco-friendly method for removing chlorinated organic pollutants, especially when combined with biological or chemical strategies. Biochar facilitates electron transfer efficiency between microorganisms, promoting the growth of dechlorinating bacteria and mitigating the toxicity of chlorinated organics through adsorption. Furthermore, biochar can activate processes such as advanced oxidation or nano zero-valent iron, generating free radicals to decompose chlorinated organic compounds. We observe a broader application of biochar and bioprocesses for treating chlorinated organic pollutants in soil, reducing environmental impacts. Conversely, for water-based pollutants, integrating biochar with chemical methods proved more effective, leading to superior purification results. This review contributes to the theoretical and practical application of biochar for removing environmental chlorinated organic pollutants.
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Affiliation(s)
- Qingqing Song
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, 150090, China
| | - Fanying Kong
- School of Water Conservancy and Civil Engineering, Northeast Agricultural University, Harbin, 150030, China
| | - Bing-Feng Liu
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, 150090, China
| | - Xueting Song
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, 150090, China
| | - Hong-Yu Ren
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, 150090, China
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3
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Yuan M, Chen G, Xiao Y, Qu Y, Ren Y. The mechanisms of yeast extracellular metabolites in stimulating microbial degradation of trichloroethylene: Physiological characteristics and omics analysis. ENVIRONMENTAL RESEARCH 2024; 255:119193. [PMID: 38777296 DOI: 10.1016/j.envres.2024.119193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 05/16/2024] [Accepted: 05/20/2024] [Indexed: 05/25/2024]
Abstract
The biodegradation of Trichloroethylene (TCE) is limited by low microbial metabolic capacity but can be enhanced through biostimulation strategies. This study explored the physiological effects and potential molecular mechanisms of the yeast Yarrowia lipolytica extracellular metabolites (YEMs) on the degradation of TCE by Acinetobacter LT1. Results indicated that YEMs stimulated the efficiency of strain LT1 by 50.28%. At the physiological level, YEMs exhibited protective effects on cell morphology, reduced oxidative stress, lessened membrane damage, and enhanced energy production and conversion. Analysis of omics results revealed that the regulation of various metabolic pathways by YEMs improved the degradation of TCE. Furthermore, RT-qPCR showed that the genes encoding YhhW protein in TCE stress and YEMs stimulation groups were 1.72 and 3.22 times the control group, respectively. Molecular docking results showed that the conformation of YhhW after binding to TCE changed into a more active form, which enhanced enzyme activity. Therefore, it is speculated that YhhW is the primary degradative enzyme involved in the process of YEMs stimulating strain LT1 to degrade TCE. These results reveal how YEMs induce strain LT1 to enhance TCE degradation.
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Affiliation(s)
- Meng Yuan
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Guotao Chen
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Yibo Xiao
- Protoga Biotechnology Co., Ltd., Shenzhen 518000, China; Microalgae Biosynthesis R&D Center, Research Institute of Tsinghua University in Shenzhen, Shenzhen 518057, China
| | - Yujiao Qu
- Protoga Biotechnology Co., Ltd., Shenzhen 518000, China; Microalgae Biosynthesis R&D Center, Research Institute of Tsinghua University in Shenzhen, Shenzhen 518057, China
| | - Yuan Ren
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, Guangzhou 510006, China; The Key Laboratory of Environmental Protection and Eco-Remediation of Guangdong Regular Higher Education Institutions, Guangzhou 510006, China.
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Zhang Z, Ali M, Tang Z, Sun Q, Wang Q, Liu X, Yin L, Yan S, Xu M, Coulon F, Song X. Unveiling complete natural reductive dechlorination mechanisms of chlorinated ethenes in groundwater: Insights from functional gene analysis. JOURNAL OF HAZARDOUS MATERIALS 2024; 469:134034. [PMID: 38521036 DOI: 10.1016/j.jhazmat.2024.134034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 02/22/2024] [Accepted: 03/12/2024] [Indexed: 03/25/2024]
Abstract
Monitored natural attenuation (MNA) of chlorinated ethenes (CEs) has proven to be a cost-effective and environment-friendly approach for groundwater remediation. In this study, the complete dechlorination of CEs with formation of ethene under natural conditions, were observed at two CE-contaminated sites, including a pesticide manufacturing facility (PMF) and a fluorochemical plant (FCP), particularly in the deeply weathered bedrock aquifer at the FCP site. Additionally, a higher abundance of CE-degrading bacteria was identified with heightened dechlorination activities at the PMF site, compared to the FCP site. The reductive dehalogenase genes and Dhc 16 S rRNA gene were prevalent at both sites, even in groundwater where no CE dechlorination was observed. vcrA and bvcA was responsible for the complete dechlorination at the PMF and FCP site, respectively, indicating the distinct contributions of functional microbial species at each site. The correlation analyses suggested that Sediminibacterium has the potential to achieve the complete dechlorination at the FCP site. Moreover, the profiles of CE-degrading bacteria suggested that dechlorination occurred under Fe3+/sulfate-reducing and nitrate-reducing conditions at the PMF and FCP site, respectively. Overall these findings provided multi-lines of evidence on the diverse mechanisms of CE-dechlorination under natural conditions, which can provide valuable guidance for MNA strategies implementation.
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Affiliation(s)
- Zhuanxia Zhang
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mukhtiar Ali
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhiwen Tang
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Qi Sun
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Qing Wang
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Xin Liu
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Lipu Yin
- China State Science Dingshi Environmental Engineering CO., LTD, Beijing, China
| | - Song Yan
- China State Science Dingshi Environmental Engineering CO., LTD, Beijing, China
| | - Minmin Xu
- Shandong Academy of Environmental Sciences Co., LTD, Jinan 250013, China
| | - Frederic Coulon
- School of Water, Energy and Environment, Cranfield University, Cranfield MK43 0AL, UK
| | - Xin Song
- Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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Jiao B, Jiang H, Liu S, Wang Y, Chen Y, Duan H, Niu Y, Shen M, Wang H, Dai Y. Unveiling the mechanisms of trichloroethylene hypersensitivity syndrome: Exploring the role of connexin 43 gap junctions in severe skin damage. Food Chem Toxicol 2024; 187:114594. [PMID: 38485042 DOI: 10.1016/j.fct.2024.114594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Revised: 03/04/2024] [Accepted: 03/11/2024] [Indexed: 03/23/2024]
Abstract
Trichloroethylene (TCE), extensively used as an organic solvent in various industrial applications, has been identified as a causative factor in inducing hypersensitivity syndrome (THS). Currently, there is no specific treatment for THS, and most patients experience serious adverse outcomes due to extensive skin damage leading to severe infection. However, the pathogenesis of THS-associated skin damage remains unclear. This study aims to elucidate the mechanism underlying skin damage from the perspective of intercellular communication and gap junctions in THS. Our results verified that hyperactivation of connexin43 gap junctions, caused by the aberrantly elevated expression of connexin43, triggers a bystander effect that promotes apoptosis and inflammation in THS via the TNF-TNFRSF1B and mitochondria-associated pathways. Additionally, we identified the gap junction inhibitor Carbenoxolone disodium (CBX) as a promising agent for the treatment of skin damage in THS. CBX protects against inflammatory cell infiltration in the skin and decreases immune cell imbalance in the peripheral blood of THS mice. Furthermore, CBX reduces connexin43 expression, apoptosis and inflammation in THS mice. The study reveals new insights into the mechanisms underlying TCE-induced skin damage, offering a potential treatment strategy for the development of effective therapies targeting severe dermatitis induced by chemical exposure.
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Affiliation(s)
- Bo Jiao
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China
| | - Haiqin Jiang
- Institute of Dermatology, Chinese Academy of Medical Sciences, National Center for STD and Leprosy Control, China CDC, Nanjing, China
| | - Shuai Liu
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China
| | - Yican Wang
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China
| | - Yuanyuan Chen
- China CDC Key Laboratory of Environment and Population Health, National Institute of Environmental Health, Chinese Center for Disease Control and Prevention, Beijing, 100021, China
| | - Huawei Duan
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China
| | - Yong Niu
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China
| | - Meili Shen
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China
| | - Hongsheng Wang
- Institute of Dermatology, Chinese Academy of Medical Sciences, National Center for STD and Leprosy Control, China CDC, Nanjing, China
| | - Yufei Dai
- National Institute for Occupational Health and Poison Control, Chinese Center for Disease Control and Prevention, Beijing, 100050, China; China CDC Key Laboratory of Environment and Population Health, National Institute of Environmental Health, Chinese Center for Disease Control and Prevention, Beijing, 100021, China.
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6
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Ojo AO, Castillo J, Cason ED, Valverde A. Biodegradation of chloroethene compounds under microoxic conditions. Biotechnol Bioeng 2024; 121:1036-1049. [PMID: 38116701 DOI: 10.1002/bit.28630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 12/06/2023] [Accepted: 12/07/2023] [Indexed: 12/21/2023]
Abstract
The biodegradation of chloroethene compounds under oxic and anoxic conditions is well established. However, the biological reactions that take place under microoxic conditions are unknown. Here, we report the biostimulated (BIOST: addition of lactate) and natural attenuated (NAT) degradation of chloroethene compounds under microoxic conditions by bacterial communities from chloroethene compounds-contaminated groundwater. The degradation of tetrachloroethene was significantly higher in NAT (15.14% on average) than in BIOST (10.13% on average) conditions at the end of the experiment (90 days). Sporomusa, Paracoccus, Sedimentibacter, Pseudomonas, and Desulfosporosinus were overrepresented in NAT and BIOST compared to the source groundwater. The NAT metagenome contains phenol hydrolase P1 oxygenase (dmpL), catechol-1,2-dioxygenase (catA), catechol-2,3-dioxygenases (dmpB, todE, and xylE) genes, which could be involved in the cometabolic degradation of chloroethene compounds; and chlorate reductase (clrA), that could be associated with partial reductive dechlorination of chloroethene compounds. Our data provide a better understanding of the bacterial communities, genes, and pathways potentially implicated in the reductive and cometabolic degradation of chloroethene compounds under microoxic conditions.
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Affiliation(s)
- Abidemi Oluranti Ojo
- Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, Bloemfontein, South Africa
- Centre for Applied Food Sustainability and Biotechnology, Central University of Technology, Bloemfontein, South Africa
| | - Julio Castillo
- Department of Microbial, Biochemical and Food Biotechnology, University of the Free State, Bloemfontein, South Africa
| | - Errol Duncan Cason
- Department of Animal Sciences, University of the Free State, Bloemfontein, South Africa
| | - Angel Valverde
- Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA-CSIC), Salamanca, Spain
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7
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Zhong H, Lyu H, Wang Z, Tian J, Wu Z. Application of dissimilatory iron-reducing bacteria for the remediation of soil and water polluted with chlorinated organic compounds: Progress, mechanisms, and directions. CHEMOSPHERE 2024; 352:141505. [PMID: 38387660 DOI: 10.1016/j.chemosphere.2024.141505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 02/16/2024] [Accepted: 02/19/2024] [Indexed: 02/24/2024]
Abstract
Chlorinated organic compounds are widely used as solvents, but they are pollutants that can have adverse effects on the environment and human health. Dissimilatory iron-reducing bacteria (DIRB) such as Shewanella and Geobacter have been applied to treat a wide range of halogenated organic compounds due to their specific biological properties. Until now, there has been no systematic review on the mechanisms of direct or indirect degradation of halogenated organic compounds by DIRB. This work summarizes the discussion of DIRB's ability to enhance the dechlorination of reaction systems through different pathways, both biological and biochemical. For biological dechlorination, some DIRB have self-dechlorination capabilities that directly dechlorinate by hydrolysis. Adjustment of dechlorination genes through genetic engineering can improve the dechlorination capabilities of DIRB. DIRB can also adjust the capacity for the microbial community to dechlorinate and provide nutrients to enhance the expression of dechlorination genes in other bacteria. In biochemical dechlorination, DIRB bioconverts Fe(III) to Fe(II), which is capable of dichlorination. On this basis, the DIRB-driven Fenton reaction can efficiently degrade chlorinated organics by continuously maintaining anoxic conditions to generate Fe(II) and oxic conditions to generate H2O2. DIRB can drive microbial fuel cells due to their electroactivity and have a good dechlorination capacity at low levels of energy consumption. The contribution of DIRB to the removal of pesticides, antibiotics and POPs is summarized. Then the DIRB electron transfer mechanism is discussed, which is core to their ability to dechlorinate. Finally, the prospect of future work on the removal of chlorine-containing organic pollutants by DIRB is presented, and the main challenges and further research directions are suggested.
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Affiliation(s)
- Hua Zhong
- Tianjin Key Laboratory of Clean Energy and Pollution Control, Hebei Engineering Research Center of Pollution Control in Power System, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, China
| | - Honghong Lyu
- Tianjin Key Laboratory of Clean Energy and Pollution Control, Hebei Engineering Research Center of Pollution Control in Power System, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, China.
| | - Zhiqiang Wang
- Tianjin Key Laboratory of Clean Energy and Pollution Control, Hebei Engineering Research Center of Pollution Control in Power System, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, China
| | - Jingya Tian
- Tianjin Key Laboratory of Clean Energy and Pollution Control, Hebei Engineering Research Center of Pollution Control in Power System, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, China
| | - Zhineng Wu
- Tianjin Key Laboratory of Clean Energy and Pollution Control, Hebei Engineering Research Center of Pollution Control in Power System, School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, China.
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Zhang K, Deng J, Lin WH, Hu S. Vitamin B 12 and iron-rich sludge-derived biochar enhanced PFOA biodegradation: Importance of direct inter-species electron transfer and functional microbes. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 346:118978. [PMID: 37742566 DOI: 10.1016/j.jenvman.2023.118978] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Revised: 08/19/2023] [Accepted: 09/09/2023] [Indexed: 09/26/2023]
Abstract
Owing to the strong C-F bond in nature and the rigidity of the poly-fluoroalkyl chain, perfluorooctanoic acid (PFOA) is difficult to be eliminated by reactive species and microbes in environments, thus posing a serious threat to ecosystems. Vitamin B12 as a cofactor for enzymes, and biochar as the electron providers and conductors, were integrated to enhance PFOA biodegradation. The raw material of biochar was the sludge after dewatering by adding 50 mg/g DS of Fe(III). After pyrolysis under high temperature (800 °C), biochar (SC800) detected high content of Fe(II) (197.64 mg/g) and abundant oxygen-containing functional groups, thus boosting PFOA biodegradation via donating electrons. 99.9% of PFOA could be removed within 60 d as 0.1 g/L SC800 was presented in the microbial systems containing vitamin B12. Moreover, vitamin B12 facilitated the evolution of Sporomusa which behaved the deflorination. Via providing reactive sites and mediating direct inter-species electron transfer (DIET), SC800 boosted PFOA biodegradation. Corresponding novel results in the present study could guide the development of bioremediation technologies for PFOA-polluted sites.
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Affiliation(s)
- Kaikai Zhang
- School of Environment, Tsinghua University, Beijing, 100091, PR China
| | - Jiayu Deng
- School of Environment, Tsinghua University, Beijing, 100091, PR China
| | - Wei-Han Lin
- College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China
| | - Shaogang Hu
- College of Environmental Sciences and Engineering, Peking University, Beijing, 100871, PR China.
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Hussain B, Chen JS, Huang SW, Tsai IS, Rathod J, Hsu BM. Underpinning the ecological response of mixed chlorinated volatile organic compounds (CVOCs) associated with contaminated and bioremediated groundwaters: A potential nexus of microbial community structure and function for strategizing efficient bioremediation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 334:122215. [PMID: 37473850 DOI: 10.1016/j.envpol.2023.122215] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 07/14/2023] [Accepted: 07/15/2023] [Indexed: 07/22/2023]
Abstract
Understanding the structure, dynamics, and functionality of microbial communities is essential for developing sustainable and effective bioremediation strategies, particularly for sites contaminated with mixed chlorinated volatile organic compounds (CVOCs), which can make the biodegradation process more complex and challenging. In this study, 16S rRNA amplicon sequencing revealed a significant change in microbial distribution in response to CVOCs contamination. The loss of sensitive taxa such as Proteobacteria and Acidobacteriota was observed, while CVOCs-resistant taxa such as Campilobacterota were found significantly enriched in contaminated sites. Additionally, varying abundances of crucial enzymes involved in the sequential biodegradation of CVOCs were expressed depending on the contamination level. Association analysis revealed that specific genera such as Sulfurospirillum, Azospira, Trichlorobacter, Acidiphilium, and Magnetospririllum could relatively survive under higher levels of CVOC contamination, whereas pH, ORP and temperature had a negative influence in their abundance and distribution. However, Dechloromonas, Thiobacillus, Pseudarcicella, Hydrogenophaga, and Sulfuritalea showed a negative relationship with CVOC contamination, highlighting their sensitivity towards CVOC contamination. These findings provide valuable insights into the relationship among ecological responses, the groundwater bacterial community, and their functionality in response to mixed CVOC contamination, offering a fundamental basis for developing effective and sustainable bioremediation strategies for CVOC-contaminated groundwater systems.
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Affiliation(s)
- Bashir Hussain
- Department of Earth and Environmental Sciences, National Chung Cheng University, Chiayi County, Taiwan; Department of Biomedical Sciences, National Chung Cheng University, Chiayi, Taiwan
| | - Jung-Sheng Chen
- Department of Medical Research, E-Da Hospital, I-Shou University, Kaohsiung, Taiwan
| | - Shih-Wei Huang
- Institute of Environmental Toxin and Emerging Contaminant, Cheng Shiu University, Kaohsiung, Taiwan; Center for Environmental Toxin and Emerging Contaminant Research, Cheng Shiu University, Kaohsiung, Taiwan
| | - I-Sen Tsai
- Department of Earth and Environmental Sciences, National Chung Cheng University, Chiayi County, Taiwan; Doctoral Program in Science, Technology, Environment and Mathematics, National Chung Cheng University, Chiayi, Taiwan
| | - Jagat Rathod
- Department of Environmental Biotechnology, Gujarat Biotechnology University, Near Gujarat International Finance and Tec (GIFT)-City, Gandhinagar, Gujarat, India
| | - Bing-Mu Hsu
- Department of Earth and Environmental Sciences, National Chung Cheng University, Chiayi County, Taiwan.
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Zhao K, Yang Y, Hou J, Liu H, Zhang Y, Wang Q, Christie P, Qi P, Liu W. Depth and contaminant-shaped bacterial community structure and assembly at an aged chlorinated aliphatic hydrocarbon-contaminated site. JOURNAL OF HAZARDOUS MATERIALS 2023; 452:131220. [PMID: 37003001 DOI: 10.1016/j.jhazmat.2023.131220] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2023] [Revised: 03/04/2023] [Accepted: 03/14/2023] [Indexed: 05/03/2023]
Abstract
Chlorinated aliphatic hydrocarbons (CAHs) are potentially toxic substances that have been detected in various contaminated environments. Biological elimination is the main technique of detoxifying CAHs in the contaminated sites, but the soil bacterial community at CAH-contaminated sites have been little investigated. Here, high-throughput sequencing analysis of soil samples from different depths (to 6 m depth) at an aged CAH-contaminated site has been conducted to investigate the community composition, function, and assembly of soil bacteria. The alpha diversity of the bacterial community significantly increased with increasing depth and bacterial community also became more convergent with increasing depth. Organohalide-respiring bacteria (OHRB) is considered keystone taxa to reduce the environmental stress of CAHs by reductive dechlorinate CAHs into nontoxic products, increases the alpha diversity of bacterial community and improves the stability of bacterial co-occurrence network. The high concentration of CAHs in deep soil and the stable anaerobic environment make deterministic processes dominate bacterial community assembly, while the topsoil is dominated by dispersal limitation. In general, CAHs at contaminated sites have a great impact on bacterial community, but the CAHs metabolic community acclimated in deep soil can reduce the environmental stress of CAHs, which provides foundation for the monitored natural attenuation technology in CAHs-contaminated sites.
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Affiliation(s)
- Ke Zhao
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China; Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China
| | - Yuying Yang
- Jiangsu Chengran Environmental Restoration Engineering Co., Ltd, Nantong 226000, China
| | - Jinyu Hou
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China
| | - Haozhe Liu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China
| | - Yun Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China
| | - Qingling Wang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China
| | - Peter Christie
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China
| | - Peishi Qi
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China.
| | - Wuxing Liu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210018, China.
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