1
|
Montgomery J, Morran S, MacGregor DR, McElroy JS, Neve P, Neto C, Vila-Aiub MM, Sandoval MV, Menéndez AI, Kreiner JM, Fan L, Caicedo AL, Maughan PJ, Martins BAB, Mika J, Collavo A, Merotto A, Subramanian NK, Bagavathiannan MV, Cutti L, Islam MM, Gill BS, Cicchillo R, Gast R, Soni N, Wright TR, Zastrow-Hayes G, May G, Malone JM, Sehgal D, Kaundun SS, Dale RP, Vorster BJ, Peters B, Lerchl J, Tranel PJ, Beffa R, Fournier-Level A, Jugulam M, Fengler K, Llaca V, Patterson EL, Gaines TA. Current status of community resources and priorities for weed genomics research. Genome Biol 2024; 25:139. [PMID: 38802856 PMCID: PMC11129445 DOI: 10.1186/s13059-024-03274-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Accepted: 05/13/2024] [Indexed: 05/29/2024] Open
Abstract
Weeds are attractive models for basic and applied research due to their impacts on agricultural systems and capacity to swiftly adapt in response to anthropogenic selection pressures. Currently, a lack of genomic information precludes research to elucidate the genetic basis of rapid adaptation for important traits like herbicide resistance and stress tolerance and the effect of evolutionary mechanisms on wild populations. The International Weed Genomics Consortium is a collaborative group of scientists focused on developing genomic resources to impact research into sustainable, effective weed control methods and to provide insights about stress tolerance and adaptation to assist crop breeding.
Collapse
Affiliation(s)
- Jacob Montgomery
- Department of Agricultural Biology, Colorado State University, 1177 Campus Delivery, Fort Collins, CO, 80523, USA
| | - Sarah Morran
- Department of Agricultural Biology, Colorado State University, 1177 Campus Delivery, Fort Collins, CO, 80523, USA
| | - Dana R MacGregor
- Protecting Crops and the Environment, Rothamsted Research, Harpenden, Hertfordshire, UK
| | - J Scott McElroy
- Department of Crop, Soil, and Environmental Sciences, Auburn University, Auburn, AL, USA
| | - Paul Neve
- Department of Plant and Environmental Sciences, University of Copenhagen, Taastrup, Denmark
| | - Célia Neto
- Department of Plant and Environmental Sciences, University of Copenhagen, Taastrup, Denmark
| | - Martin M Vila-Aiub
- IFEVA-Conicet-Department of Ecology, University of Buenos Aires, Buenos Aires, Argentina
| | | | - Analia I Menéndez
- Department of Ecology, Faculty of Agronomy, University of Buenos Aires, Buenos Aires, Argentina
| | - Julia M Kreiner
- Department of Botany, The University of British Columbia, Vancouver, BC, Canada
| | - Longjiang Fan
- Institute of Crop Sciences, Zhejiang University, Hangzhou, China
| | - Ana L Caicedo
- Department of Biology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Peter J Maughan
- Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA
| | | | - Jagoda Mika
- Bayer AG, Weed Control Research, Frankfurt, Germany
| | | | - Aldo Merotto
- Department of Crop Sciences, Federal University of Rio Grande Do Sul, Porto Alegre, Rio Grande Do Sul, Brazil
| | - Nithya K Subramanian
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, USA
| | | | - Luan Cutti
- Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, USA
| | | | - Bikram S Gill
- Department of Plant Pathology, Kansas State University, Manhattan, KS, USA
| | - Robert Cicchillo
- Crop Protection Discovery and Development, Corteva Agriscience, Indianapolis, IN, USA
| | - Roger Gast
- Crop Protection Discovery and Development, Corteva Agriscience, Indianapolis, IN, USA
| | - Neeta Soni
- Crop Protection Discovery and Development, Corteva Agriscience, Indianapolis, IN, USA
| | - Terry R Wright
- Genome Center of Excellence, Corteva Agriscience, Johnston, IA, USA
| | | | - Gregory May
- Genome Center of Excellence, Corteva Agriscience, Johnston, IA, USA
| | - Jenna M Malone
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, South Australia, Australia
| | - Deepmala Sehgal
- Jealott's Hill International Research Centre, Syngenta Ltd, Bracknell, Berkshire, UK
| | - Shiv Shankhar Kaundun
- Jealott's Hill International Research Centre, Syngenta Ltd, Bracknell, Berkshire, UK
| | - Richard P Dale
- Jealott's Hill International Research Centre, Syngenta Ltd, Bracknell, Berkshire, UK
| | - Barend Juan Vorster
- Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa
| | - Bodo Peters
- Bayer AG, Weed Control Research, Frankfurt, Germany
| | | | - Patrick J Tranel
- Department of Crop Sciences, University of Illinois, Urbana, IL, USA
| | - Roland Beffa
- Senior Scientist Consultant, Herbicide Resistance Action Committee / CropLife International, Liederbach, Germany
| | | | - Mithila Jugulam
- Department of Agronomy, Kansas State University, Manhattan, KS, USA
| | - Kevin Fengler
- Genome Center of Excellence, Corteva Agriscience, Johnston, IA, USA
| | - Victor Llaca
- Genome Center of Excellence, Corteva Agriscience, Johnston, IA, USA
| | - Eric L Patterson
- Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, USA
| | - Todd A Gaines
- Department of Agricultural Biology, Colorado State University, 1177 Campus Delivery, Fort Collins, CO, 80523, USA.
| |
Collapse
|
2
|
Ma C, Tian L, Wang YE, Huo J, An Z, Sun S, Kou S, Wang W, Li Y, Zhang J, Chen L. Discovery of Novel Pyrazole Acyl Thiourea Skeleton Analogue as Potential Herbicide Candidates. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:7727-7734. [PMID: 38530940 DOI: 10.1021/acs.jafc.3c08863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/28/2024]
Abstract
To discover novel transketolase (TKL, EC 2.2.1.1) inhibitors with potential herbicidal applications, a series of pyrazole acyl thiourea derivatives were designed based on a previously obtained pyrazolamide acyl lead compound, employing a scaffold hopping strategy. The compounds were synthesized, their structures were characterized, and they were evaluated for herbicidal activities. The results indicate that 7a exhibited exceptional herbicidal activity against Digitaria sanguinalis and Amaranthus retroflexus at a dosage of 90 g ai/ha, using the foliar spray method in a greenhouse. This performance is comparable to that of commercial products, such as nicosulfuron and mesotrione. Moreover, 7a showed moderate growth inhibitory activity against the young root and stem of A. retroflexus at 200 mg/L in the small cup method, similar to that of nicosulfuron and mesotrione. Subsequent mode-of-action verification experiments revealed that 7a and 7e inhibited Setaria viridis TKL (SvTKL) enzyme activity, with IC50 values of 0.740 and 0.474 mg/L, respectively. Furthermore, they exhibited inhibitory effects on the Brassica napus acetohydroxyacid synthase enzyme activity. Molecular docking predicted potential interactions between these (7a and 7e) and SvTKL. A greenhouse experiment demonstrated that 7a exhibited favorable crop safety at 150 g ai/ha. Therefore, 7a is a promising herbicidal candidate that is worthy of further development.
Collapse
Affiliation(s)
- Chujian Ma
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Luyang Tian
- Bohai College, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Yan-En Wang
- College of Science, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Jingqian Huo
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Zexiu An
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Susu Sun
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Song Kou
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Wenfei Wang
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Yaze Li
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Jinlin Zhang
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| | - Lai Chen
- College of Plant Protection, Hebei Agricultural University, Baoding 071001, P. R. China
| |
Collapse
|
3
|
Paul SK, Mazumder S, Naidu R. Herbicidal weed management practices: History and future prospects of nanotechnology in an eco-friendly crop production system. Heliyon 2024; 10:e26527. [PMID: 38444464 PMCID: PMC10912261 DOI: 10.1016/j.heliyon.2024.e26527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 01/23/2024] [Accepted: 02/14/2024] [Indexed: 03/07/2024] Open
Abstract
Weed management is an important aspect of crop production, as weeds cause significant losses in terms of yield and quality. Various approaches to weed management are commonly practiced by crop growers. Due to limitations in other control methods, farmers often choose herbicides as a cost-effective, rapid and highly efficient weed control strategy. Although herbicides are highly effective on most weeds, they are not a complete solution for weed management because of the genetic diversity and evolving flexibility of weed communities. The excessive and indiscriminate use of herbicides and their dominance in weed control have triggered the rapid generation of herbicide-resistant weed species. Moreover, environmental losses of active ingredients in the herbicides cause serious damage to the environment and pose a serious threat to living organisms. Scientific advances have enabled nanotechnology to emerge as an innovation with real potential in modern agriculture, adding a new dimension in the preparation of controlled release formulations (CRF) of herbicides. Here the required amount of active ingredients is released over longer periods of time to obtain the desired biological efficacy whilst reducing the harmful effects of these chemicals. Various organic and inorganic carrier materials have been utilised in CRF and researchers have a wide range of options for the synthesis of eco-friendly carrier materials, especially those with less or no toxicity to living organisms. This manuscript addresses the history, progress, and consequences of herbicide application, and discusses potential ways to reduce eco-toxicity due to herbicide application, along with directions for future research areas using the benefits of nanotechnology.
Collapse
Affiliation(s)
- Santosh Kumar Paul
- Global Centre for Environmental Remediation (GCER), ATC Building, The University of Newcastle, Callaghan, NSW 2308, Australia
- CRC for Contamination Assessment and Remediation of the Environment (crcCARE), ATC Building, The University of Newcastle, Callaghan, NSW 2308, Australia
- Agronomy Division, Bangladesh Agricultural Research Institute (BARI), Joydebpur, Gazipur 1701, Bangladesh
| | - Santa Mazumder
- Sher-E-Bangla Agricultural University, Dhaka-1207, Bangladesh
| | - Ravi Naidu
- Global Centre for Environmental Remediation (GCER), ATC Building, The University of Newcastle, Callaghan, NSW 2308, Australia
- CRC for Contamination Assessment and Remediation of the Environment (crcCARE), ATC Building, The University of Newcastle, Callaghan, NSW 2308, Australia
| |
Collapse
|
4
|
Paul SK, Xi Y, Sanderson P, Naidu R. Controlled release herbicide formulation for effective weed control efficacy. Sci Rep 2024; 14:4216. [PMID: 38378734 PMCID: PMC10879510 DOI: 10.1038/s41598-024-53820-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Accepted: 02/05/2024] [Indexed: 02/22/2024] Open
Abstract
Controlled release formulation (CRF) of herbicide is an effective weed management technique with less eco-toxicity than other available commercial formulations. To maximise the effectiveness of CRFs however, it is crucial to understand the herbicide-releasing behaviour at play, which predominately depends on the interaction mechanisms between active ingredients and carrier materials during adsorption. In this study, we investigated and modelled the adsorption characteristics of model herbicide 2,4-D onto two organo-montmorillonites (octadecylamine- and aminopropyltriethoxysilane-modified) to synthesise polymer-based CRFs. Herbicide-releasing behaviour of the synthesised CRF microbeads was then analysed under various experimental conditions, and weed control efficacy determined under glasshouse conditions. Results revealed that adsorption of 2,4-D onto both organo-montmorillonites follows the pseudo-second-order kinetics model and is predominately controlled by the chemisorption process. However, multi-step mechanisms were detected in the adsorption on both organoclays, hence intra-particle diffusion is not the sole rate-limiting step for the adsorption process. Both organoclays followed the Elovich model, suggesting they have energetically heterogeneous surfaces. Herbicide-releasing behaviours of synthesised beads were investigated at various pH temperatures and ionic strengths under laboratory and glasshouse conditions. Furthermore, weed control efficacy of synthesised beads were investigated using pot studies under glasshouse condition. Desorption studies revealed that both synthesised microbeads have slow releasing behaviour at a wide range of pHs (5-9), temperatures (25-45 °C), and ionic strengths. The results also revealed that synthesised microbeads have excellent weed control efficacy on different broad-leaf weed species under glasshouse conditions.
Collapse
Affiliation(s)
- Santosh Kumar Paul
- Global Centre for Environmental Remediation (GCER), The University of Newcastle, ATC Building, Callaghan, NSW, 2308, Australia
- CRC for Contamination Assessment and Remediation of the Environment (CRC CARE), The University of Newcastle, ATC Building, Callaghan, NSW, 2308, Australia
- Agronomy Division, Bangladesh Agricultural Research Institute (BARI), Joydebpur, Gazipur, 1701, Bangladesh
| | - Yunfei Xi
- Central Analytical Research Facility (CARF) & School of Chemistry and Physics - Faculty of Science, Queensland University of Technology, Brisbane, QLD, 4001, Australia
| | - Peter Sanderson
- Global Centre for Environmental Remediation (GCER), The University of Newcastle, ATC Building, Callaghan, NSW, 2308, Australia
- CRC for Contamination Assessment and Remediation of the Environment (CRC CARE), The University of Newcastle, ATC Building, Callaghan, NSW, 2308, Australia
| | - Ravi Naidu
- Global Centre for Environmental Remediation (GCER), The University of Newcastle, ATC Building, Callaghan, NSW, 2308, Australia.
- CRC for Contamination Assessment and Remediation of the Environment (CRC CARE), The University of Newcastle, ATC Building, Callaghan, NSW, 2308, Australia.
| |
Collapse
|
5
|
Glaser M, Essl F, Follak S. Austrian farmers perception of new weeds. PLANT-ENVIRONMENT INTERACTIONS (HOBOKEN, N.J.) 2024; 5:e10129. [PMID: 38323127 PMCID: PMC10840368 DOI: 10.1002/pei3.10129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 10/24/2023] [Accepted: 11/07/2023] [Indexed: 02/08/2024]
Abstract
The composition of weed floras in Central European fields has shifted creating a novel management issue: new weeds, that is, species that are currently spreading and increasing in impact. In their role as primary decision makers on the ground, farmers' perception of these new weeds plays a pivotal role in collecting information on their occurrence and control. We conducted an online survey to determine if Austrian farmers recognized 15 selected new weed taxa (12 species and 3 genera) from their farm. The 181 surveyed farmers also estimated the required management effort for these species and elicited their current management practices. Additional questions were posed to understand farmers' general perception of changes in the weed flora. We used a generalized linear mixed model to estimate differences in management effort and identify new weeds that merit monitoring and management programs. Two weed genera (Fallopia spp. and Panicum spp.) showed significantly higher than average management effort. The most commonly used management measures were manual removal, herbicide use and crop rotation. A majority of farmers reported changes in the weed flora; over two thirds reported new species and over one third reported new weeds that were difficult to control. In summary, our results suggest that respondents were aware of the challenges posed by new weeds but required more information on management and prevention strategies.
Collapse
Affiliation(s)
- Michael Glaser
- Division of BioInvasions, Global Change & Macroecology, Department of Botany and Biodiversity ResearchUniversity of ViennaViennaAustria
- Vienna Doctoral School of Ecology and EvolutionUniversity of ViennaViennaAustria
| | - Franz Essl
- Division of BioInvasions, Global Change & Macroecology, Department of Botany and Biodiversity ResearchUniversity of ViennaViennaAustria
| | - Swen Follak
- Institute for Sustainable Plant Production, Austrian Agency for Health and Food SafetyViennaAustria
| |
Collapse
|
6
|
Chee-Sanford JC, Connor LM. Comparison of microbial community assemblages in the rhizosphere of three Amaranthus spp. PLoS One 2023; 18:e0294966. [PMID: 38019804 PMCID: PMC10686429 DOI: 10.1371/journal.pone.0294966] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 11/10/2023] [Indexed: 12/01/2023] Open
Abstract
Weed management remains a major challenge in cropping systems worldwide, with rising interest in ecological based approaches that can be integrated with herbicide use. Soil microbial communities may play important, yet undiscovered, roles in weed success. Little is known about the rhizosphere communities associated with weeds like Amaranthus, commonly known as pigweeds, and considered some of the most problematic weeds in agricultural systems. In a greenhouse experiment that allowed controlled plant growth conditions and a high number of individual plant specimens to analyze for statistical robustness (n = 8 per species), we show that specific bacterial assemblages form in the rhizospheres of A. retroflexus L. (redroot pigweed), A. palmeri S. Watson (Palmer amaranth), and A. tuberculatus (Moq.) J. D. Sauer (waterhemp). Using a relatively rapid and easy approach of T-RFLP community profiling of the 16S rRNA genes, distinct assemblages corresponded to plant species (PERMANOVA F = 14.776, p = 0.001), and further within each species, similar communities (F = 11.449, p = 0.001) were associated with three rhizosphere soil fractions taken in increasing distances away from the root tissue. These results provide the first solid basis for distinct plant-microbe relationships within three closely related Amaranthus species, warranting closer examination of the identities and function of the microorganisms that appear to be selectively recruited from the extant soil community. More intensive efforts to obtain the microbial taxonomic identities via sequencing are underway that can lead to further detailed studies to elucidate important functional plant-microbe interactions that may associate with weed success. Such data provides underlying key information that may ultimately exploit weed-microbe interactions in development of new integrated weed control tactics.
Collapse
|
7
|
Wang Y, Liu W, Dong B, Wang D, Nian Y, Zhou H. Isolation and Identification of Herbicidal Active Compounds from Brassica oleracea L. and Exploration of the Binding Sites of Brassicanate A Sulfoxide. PLANTS (BASEL, SWITZERLAND) 2023; 12:2576. [PMID: 37447136 DOI: 10.3390/plants12132576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Revised: 07/03/2023] [Accepted: 07/05/2023] [Indexed: 07/15/2023]
Abstract
Brassica oleracea L. has strong allelopathic effects on weeds. However, the allelochemicals with herbicidal activity in B. oleracea L. are still unknown. In this study, we evaluated the activity of allelochemicals isolated from Brassica oleracea L. based on the germination and growth of model plant Lactuca sativa Linn., grass weed Panicum miliaceum, and broadleaf weed Chenopodium album. Additionally, we employed molecular docking to predict the binding of brassicanate A sulfoxide to herbicide targets. The results of this study showed that eight compounds with herbicidal activity were isolated from B. oleracea L., and the predicted results indicated that brassicanate A sulfoxide was stably bound to dihydroxyacid dehydratase, hydroxymethylpyruvate dioxygenase, acetolactate synthase, PYL family proteins and transport inhibitor response 1. This research provides compound sources and a theoretical foundation for the development of natural herbicides.
Collapse
Affiliation(s)
- Yu Wang
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
| | - Wanyou Liu
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
| | - Baozhu Dong
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
| | - Dong Wang
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
| | - Yin Nian
- State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China
| | - Hongyou Zhou
- College of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot 010020, China
| |
Collapse
|
8
|
Khang DT, Quy TN, Dam NP, Tuan NT, Men TT, Van Ay N, Thuy NP. Isolation and purification of potential weed inhibitors from Mimosa pigra L. Heliyon 2023; 9:e18205. [PMID: 37519759 PMCID: PMC10375793 DOI: 10.1016/j.heliyon.2023.e18205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 07/08/2023] [Accepted: 07/11/2023] [Indexed: 08/01/2023] Open
Abstract
The diversity in structure and herbicidal properties detected in natural phytotoxic compounds could bring about advantages for development bio-herbicides. The present study was carried out search for potential weed inhibitors from the parts of Mimosa pigra L. The ethyl acetate (EtOAc) extract of leaf of M. pigra showed inhibitory activity during the time that Echinochloa crus-galli (barnyardgrass) germinates and grows, which is greater than that of other extracts. From this active extract, potent growth inhibitors were isolated and identified by column chromatography (CC), gas chromatography-mass spectrometry (GC-MS) and nuclear magnetic resonance (1H and 13C NMR). The six compounds were purified in this study namely: lupeol (C1, 13.2 mg), stigmastane-3,6-dione (C2, 14.7 mg), quercetin (C3, 20.2 mg), chrysoeriol (C4, 28 mg), methyl gallate (C5, 21.5 mg) and daucosterol (C6, 16.0 mg). The C2 (quercetin) compound completely inhibited the emergency, shoot height and root length of E. crus-galli at 1 mg/mL concentration (IC50 shoot height = 0.56 mg/mL). This was also the first study to report the isolation and allelopathic activity of lupeol, chrysoeriol and daucosterol from M. pigra leaf. Findings of this study highlighted that quercetin from M. pigra may become bio-herbicide to control barnyard grass and other grass weeds for the development of safe agriculture.
Collapse
Affiliation(s)
- Do Tan Khang
- Institute of Food and Biotechnology, Can Tho University, 94000, Can Tho City, Viet Nam
| | - Tran Ngoc Quy
- Institute of Food and Biotechnology, Can Tho University, 94000, Can Tho City, Viet Nam
| | - Nguyen Phuc Dam
- College of Education, Can Tho University, 94000, Can Tho City, Viet Nam
| | - Nguyen Trong Tuan
- College of Natural Sciences, Can Tho University, 94000, Can Tho City, Viet Nam
| | - Tran Thanh Men
- College of Natural Sciences, Can Tho University, 94000, Can Tho City, Viet Nam
| | - Nguyen Van Ay
- College of Agriculture, Can Tho University, 94000, Can Tho City, Viet Nam
| | - Nguyen Phuong Thuy
- School of Agriculture and Aquaculture, Tra Vinh University, Tra Vinh province, 87000, Viet Nam
| |
Collapse
|
9
|
Nan JX, Dong J, Cao JQ, Huang GY, Shi XX, Wei XF, Chen Q, Lin HY, Yang GF. Structure-Based Design of 4-Hydroxyphenylpyruvate Dioxygenase Inhibitor as a Potential Herbicide for Cotton Fields. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:5783-5795. [PMID: 36977356 DOI: 10.1021/acs.jafc.2c08448] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
4-Hydroxyphenylpyruvate dioxygenase (HPPD, EC 1.13.11.27) is one of the most promising herbicide targets for the development of agricultural chemicals owing to its unique mechanism of action in plants. We previously reported on the co-crystal structure of Arabidopsis thaliana (At) HPPD complexed with methylbenquitrione (MBQ), an inhibitor of HPPD that we previously discovered. Based on this crystal structure, and in an attempt to discover even more effective HPPD-inhibiting herbicides, we designed a family of triketone-quinazoline-2,4-dione derivatives featuring a phenylalkyl group through increasing the interaction between the substituent at the R1 position and the amino acid residues at the active site entrance of AtHPPD. Among the derivatives, 6-(2-hydroxy-6-oxocyclohex-1-ene-1-carbonyl)-1,5-dimethyl-3-(1-phenylethyl)quinazoline-2,4(1H,3H)-dione (23) was identified as a promising compound. The co-crystal structure of compound 23 with AtHPPD revealed that hydrophobic interactions with Phe392 and Met335, and effective blocking of the conformational deflection of Gln293, as compared with that of the lead compound MBQ, afforded a molecular basis for structural modification. 3-(1-(3-Fluorophenyl)ethyl)-6-(2-hydroxy-6-oxocyclohex-1-ene-1-carbonyl)-1,5-dimethylquinazoline-2,4(1H,3H)-dione (31) was confirmed to be the best subnanomolar-range AtHPPD inhibitor (IC50 = 39 nM), making it approximately seven times more potent than MBQ. In addition, the greenhouse experiment showed favorable herbicidal potency for compound 23 with a broad spectrum and acceptable crop selectivity against cotton at the dosage of 30-120 g ai/ha. Thus, compound 23 possessed a promising prospect as a novel HPPD-inhibiting herbicide candidate for cotton fields.
Collapse
Affiliation(s)
- Jia-Xu Nan
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Jin Dong
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Jun-Qiao Cao
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Guang-Yi Huang
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Xing-Xing Shi
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Xue-Fang Wei
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Qiong Chen
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Hong-Yan Lin
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| | - Guang-Fu Yang
- National Key Laboratory of Green Pesticide, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, P.R. China
| |
Collapse
|
10
|
Peralta-Sánchez JM, Ansotegui A, Hortas F, Redón S, Martín-Vélez V, Green AJ, Navarro-Ramos MJ, Lovas-Kiss A, Sánchez MI. Seed Size, Not Dispersal Syndrome, Determines Potential for Spread of Ricefield Weeds by Gulls. PLANTS (BASEL, SWITZERLAND) 2023; 12:1470. [PMID: 37050096 PMCID: PMC10096937 DOI: 10.3390/plants12071470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 03/22/2023] [Accepted: 03/25/2023] [Indexed: 06/19/2023]
Abstract
Recent field data suggest that migratory gulls disperse many rice field weeds by gut passage (endozoochory), most of which are dry fruited and widely assumed to have no long-distance dispersal mechanisms, except via human activity. We investigated this mechanism with a feeding experiment, in which seeds of five common rice field weeds (in order of increasing seed size: Juncus bufonius, Cyperus difformis, Polypogon monspeliensis, Amaranthus retroflexus, and the fleshy-fruited Solanum nigrum) were fed to seven individuals of lesser black-backed gulls Larus fuscus held in captivity. We quantified seed survival after collecting faeces at intervals for 33 h after ingestion, then extracting intact seeds and running germination tests, which were also conducted for control seeds. All five species showed high seed survival after gut passage, of >70%. Gut retention times averaged 2-4 h, but maxima exceeded 23 h for all species. Germinability after gut passage was 16-54%, and gut passage accelerated germination in J. bufonius and S. nigrum, but slowed it down in the other species. All species had lower germinability after gut passage compared to control seeds (likely due to stratification prior to the experiment), but the loss of germinability was higher in smaller seeds. There was no evidence that the different dispersal syndromes assigned to the five species (endozoochory, epizoochory or barochory) had any influence on our results. In contrast, mean gut retention time was strongly and positively related to seed size, likely because small seeds pass more quickly from the gizzard into the intestines. Non-classical endozoochory of dry-fruited seeds by waterbirds is a major but overlooked mechanism for potential long-distance dispersal, and more research into this process is likely essential for effective weed management.
Collapse
Affiliation(s)
- Juan Manuel Peralta-Sánchez
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Avda. Reina Mercedes 6, 41012 Seville, Spain; (J.M.P.-S.); (A.A.); (S.R.)
- Departamento de Microbiología, Universidad de Granada, Avda. Fuentenueva s/n, 18071 Granada, Spain
| | - Albán Ansotegui
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Avda. Reina Mercedes 6, 41012 Seville, Spain; (J.M.P.-S.); (A.A.); (S.R.)
- Wetland Ecology Department, Estación Biológica de Doñana, EBD-CSIC, Avda. Americo Vespucio 26, 41092 Seville, Spain; (V.M.-V.); (A.J.G.); (M.J.N.-R.)
| | - Francisco Hortas
- Instituto Universitario de Investigación Marina (INMAR), Campus de Excelencia Internacional del Mar (CEI·MAR), Universidad de Cádiz, Avda. República Árabe Saharaui s/n, 11510 Puerto Real, Spain;
| | - Stella Redón
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Avda. Reina Mercedes 6, 41012 Seville, Spain; (J.M.P.-S.); (A.A.); (S.R.)
- Wetland Ecology Department, Estación Biológica de Doñana, EBD-CSIC, Avda. Americo Vespucio 26, 41092 Seville, Spain; (V.M.-V.); (A.J.G.); (M.J.N.-R.)
| | - Víctor Martín-Vélez
- Wetland Ecology Department, Estación Biológica de Doñana, EBD-CSIC, Avda. Americo Vespucio 26, 41092 Seville, Spain; (V.M.-V.); (A.J.G.); (M.J.N.-R.)
| | - Andy J. Green
- Wetland Ecology Department, Estación Biológica de Doñana, EBD-CSIC, Avda. Americo Vespucio 26, 41092 Seville, Spain; (V.M.-V.); (A.J.G.); (M.J.N.-R.)
| | - María J. Navarro-Ramos
- Wetland Ecology Department, Estación Biológica de Doñana, EBD-CSIC, Avda. Americo Vespucio 26, 41092 Seville, Spain; (V.M.-V.); (A.J.G.); (M.J.N.-R.)
| | - Adam Lovas-Kiss
- Wetland Ecology Research Group, Department of Tisza Research, MTA Centre for Ecological Research-DRI, H-4026 Debrecen, Hungary;
| | - Marta I. Sánchez
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Avda. Reina Mercedes 6, 41012 Seville, Spain; (J.M.P.-S.); (A.A.); (S.R.)
- Wetland Ecology Department, Estación Biológica de Doñana, EBD-CSIC, Avda. Americo Vespucio 26, 41092 Seville, Spain; (V.M.-V.); (A.J.G.); (M.J.N.-R.)
| |
Collapse
|
11
|
Voinorosky CL, Standen KM, Stewart KJ. Environmental Impact of Triclopyr on Habitat Quality in Boreal Rights-of-Way. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2022; 41:2955-2967. [PMID: 36039969 DOI: 10.1002/etc.5475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 06/23/2022] [Accepted: 08/26/2022] [Indexed: 06/15/2023]
Abstract
The indirect effects of herbicides on habitat quality in boreal ecoregions remain poorly understood. Herbicides are commonly applied on boreal rights-of-way to control vegetation below power lines, where they can indirectly enter the soil ecosystem after leaf abscission. Key soil processes such as litter decomposition and soil nutrient cycling can be influenced by altering litter chemistry and/or impacting decomposer species. Disruption of these soil processes could lead to changes in ecosystem health of boreal systems. The indirect impacts of triclopyr on habitat quality of treated boreal rights-of-way were examined through litter mass loss and quality (carbon-to-nitrogen ratios) and the response of boreal invertebrates (Folsomia candida and Oppia nitens) in microcosms and avoidance tests. Litter breakdown rates were not significantly different within a year of treatment. However, we did observe nitrogen profile differences between field-treated and untreated samples, which likely resulted from triclopyr-induced repression of natural leaf senescence processes. At field application rates, there were no differences in survival and reproduction rates of F. candida, which is key in litter breakdown. The triclopyr concentrations that caused 50% of tested F. candida and O. nitens to avoid treated litter were above field application rates. Therefore, field application rates of triclopyr are not expected to impair habitat quality and ecosystem services of boreal ecoregions based on the parameters we evaluated. Our study improves understanding of the effects of herbicide application on habitat quality and is critical for responsible herbicide use on boreal rights-of-way. Environ Toxicol Chem 2022;41:2955-2967. © 2022 SETAC.
Collapse
Affiliation(s)
| | - Katherine M Standen
- Department of Plant Science, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
| | - Katherine J Stewart
- Toxicology Centre, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
- Department of Soil Science, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
| |
Collapse
|
12
|
Mahajan G, Chauhan BS. Glyphosate Efficacy in Chloris virgata Sw. in Response to Temperature and Tank Mixing. PLANTS (BASEL, SWITZERLAND) 2022; 11:3190. [PMID: 36501230 PMCID: PMC9737009 DOI: 10.3390/plants11233190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/29/2022] [Revised: 11/15/2022] [Accepted: 11/18/2022] [Indexed: 06/17/2023]
Abstract
Glyphosate alone or a tank mixture of glyphosate and 2,4-D is commonly used for broad-spectrum weed control under fallow conditions in Australia. Air temperature or mixing glyphosate with 2,4-D, may influence the efficacy of glyphosate on feather fingergrass (Chloris virgata Sw.), a problematic summer-season weed of Australia. Dose-response studies were conducted with four populations of feather fingergrass under temperature-controlled glasshouse conditions (35/25 °C and 25/15 °C at 12 h/12 h) to assess the level of glyphosate resistance in relation to temperature regimes. Four parameter log-logistic models were used to develop dose-response curves. Based on plant mortality percentage, LD50 (lethal dose for 50% mortality) values of glyphosate at 25/15 °C for populations Ch, SGM2, SGW2, and CP2 were 137, 60, 650, and 1067 g ae ha-1, respectively. However, at 35/25 °C, the corresponding LD50 values were 209, 557, 2108, and 2554 g ae ha-1, respectively. A similar response was observed for the parameter GR50 (dose for 50% growth reduction) values of glyphosate. These results indicate that populations SGW2 and CP2 are highly glyphosate-resistant and in the summer season, it may be very difficult to control these populations due to poor glyphosate efficacy. These results further suggest that the efficacy of glyphosate for feather fingergrass control can be improved if applied during cooler temperatures (25/15 °C) or the spring season compared with warmer temperatures (35/25 °C) or the summer season. In another study, 2,4-D antagonized glyphosate remarkably in the CP2 (glyphosate-resistant) population but only marginally in the Ch (glyphosate-susceptible) population. Thus, it is not advisable to mix 2,4-D with glyphosate for the control of glyphosate-resistant feather fingergrass populations. The results further suggest that the use of this mixture is useful if the feather fingergrass is not glyphosate-resistant; however, the use of the mixture is to be avoided if the population is glyphosate-resistant in order to not exacerbate the potential resistance problem.
Collapse
Affiliation(s)
- Gulshan Mahajan
- The Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, Gatton, QLD 4343, Australia
- Department of Agronomy, Punjab Agricultural University, Ludhiana 141004, Punjab, India
| | - Bhagirath Singh Chauhan
- The Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, Gatton, QLD 4343, Australia
- School of Agriculture and Food Sciences (SAFS), The University of Queensland, Gatton, QLD 4343, Australia
- Department of Agronomy, Chaudhary Charan Singh Haryana Agricultural University (CCSHAU), Hisar 125004, Haryana, India
| |
Collapse
|
13
|
Physiological and biochemical responses of selected weed and crop species to the plant-based bioherbicide WeedLock. Sci Rep 2022; 12:19602. [PMID: 36379972 PMCID: PMC9666524 DOI: 10.1038/s41598-022-24144-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Accepted: 11/10/2022] [Indexed: 11/16/2022] Open
Abstract
WeedLock is a broad-spectrum plant-based bioherbicide that is currently on the market as a ready-to-use formulation. In this study, we investigated the physiological and biochemical effects of WeedLock (672.75 L ha-1) on Ageratum conyzoides L., Eleusine indica (L.) Gaertn, Zea mays L., and Amaranthus gangeticus L. at four different time points. WeedLock caused significant reductions in chlorophyll pigment content and disrupted photosynthetic processes in all test plants. The greatest inhibition in photosynthesis was recorded in A. conyzoides at 24 h post-treatment with a 74.88% inhibition. Plants treated with WeedLock showed increased malondialdehyde (MDA) and proline production, which is indicative of phytotoxic stress. Remarkably, MDA contents of all treated plants increased by more than 100% in comparison to untreated. The activity of the antioxidant enzymes superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD) was elevated following treatment with WeedLock. Significant increases were observed in the SOD activity of A. conyzoides ranging from 69.66 to 118.24% from 6 to 72 h post-treatment. Our findings confirm that WeedLock disrupts the normal physiological and biochemical processes in plants following exposure and that its mode of action is associated with ROS (reactive oxygen species) production, similar to that of PPO (protoporphyrinogen oxidase) inhibitors, although specific site-of-action of this novel bioherbicide warrants further investigation.
Collapse
|
14
|
Roberts J, Florentine S, Fernando WGD, Tennakoon KU. Achievements, Developments and Future Challenges in the Field of Bioherbicides for Weed Control: A Global Review. PLANTS 2022; 11:plants11172242. [PMID: 36079623 PMCID: PMC9460325 DOI: 10.3390/plants11172242] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 08/19/2022] [Accepted: 08/20/2022] [Indexed: 11/16/2022]
Abstract
The intrusion of weeds into fertile areas has resulted in significant global economic and environmental impacts on agricultural production systems and native ecosystems, hence without ongoing and repeated management actions, the maintenance or restoration of these systems will become increasingly challenging. The establishment of herbicide resistance in many species and unwanted pollution caused by synthetic herbicides has ushered in the need for alternative, eco-friendly sustainable management strategies, such as the use of bioherbicides. Of the array of bioherbicides currently available, the most successful products appear to be sourced from fungi (mycoherbicides), with at least 16 products being developed for commercial use globally. Over the last few decades, bioherbicides sourced from bacteria and plant extracts (such as allelochemicals and essential oils), together with viruses, have also shown marked success in controlling various weeds. Despite this encouraging trend, ongoing research is still required for these compounds to be economically viable and successful in the long term. It is apparent that more focused research is required for (i) the improvement of the commercialisation processes, including the cost-effectiveness and scale of production of these materials; (ii) the discovery of new production sources, such as bacteria, fungi, plants or viruses and (iii) the understanding of the environmental influence on the efficacy of these compounds, such as atmospheric CO2, humidity, soil water stress, temperature and UV radiation.
Collapse
Affiliation(s)
- Jason Roberts
- Future Regions Research Centre, Institute of Innovation, Science and Sustainability, Federation University Australia, Ballarat 3350, VIC, Australia
| | - Singarayer Florentine
- Future Regions Research Centre, Institute of Innovation, Science and Sustainability, Federation University Australia, Ballarat 3350, VIC, Australia
- Correspondence: ; Tel.: +61-3-5327-9231
| | | | - Kushan U. Tennakoon
- Future Regions Research Centre, Institute of Innovation, Science and Sustainability, Federation University Australia, Berwick Campus, Berwick 3806, VIC, Australia
| |
Collapse
|
15
|
Naeem M, Farooq S, Hussain M. The Impact of Different Weed Management Systems on Weed Flora and Dry Biomass Production of Barley Grown under Various Barley-Based Cropping Systems. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11060718. [PMID: 35336601 PMCID: PMC8950799 DOI: 10.3390/plants11060718] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Revised: 03/06/2022] [Accepted: 03/07/2022] [Indexed: 05/07/2023]
Abstract
Weeds are among the major issues responsible for reduction in yield and profit in any crop production system. Herbicides are the easiest and quickest solution of weeds; however, their frequent use exert negative consequences on environment, human health, and results in the evolution of herbicide-resistant weed species. Due to these reasons, alternative weed management methods that are less harmful to environment and human health are needed. This two-year study evaluated the impact of different weed management options, i.e., false seedbed (FS), allelopathic water extracts (AWE), chemical control (CC), weed-free (WF) weedy-check (WC) on weed spectrum in various barley-based cropping systems, i.e., fallow-barley (FB), maize-barley (MB), cotton-barley (CB), mungbean-barley (M*B), and sorghum-barley (SB). Data relating to density, diversity, and biomass production of weed species prevailing in the studied cropping systems were recorded. Interactive effect of weed management methods and barley-based cropping systems significantly altered weed diversity, and densities of individual, broadleaved, and grassy weeds. A total 13 weed species (ten broadleaved and three grass) were recorded during both years of study. The highest dry biomass, diversity, and density of individual, broadleaved, and grassy weeds were noted in WC treatment, whereas WF treatment resulted in the lowest values of these traits. Chemical control resulted in the highest suppression of weed flora and improved dry biomass production of barley followed by AWE. The SB cropping system with CC or AWE resulted in the least weed flora. The M*B cropping system with CC or AWE produced the highest dry biomass of barley. It is concluded that including sorghum crop in rotation and applying AWE could suppress weeds comparable to herbicides. Similarly, including mungbean in rotation and applying AWE could increase dry biomass production of barley. In conclusion, herbicides can be replaced with an eco-friendly approach, i.e., allelopathy and inclusion of sorghum crop could be helpful in suppressing weed flora.
Collapse
Affiliation(s)
- Muhammad Naeem
- Department of Agronomy, Bahauddin Zakariya University, Multan 60800, Pakistan;
| | - Shahid Farooq
- Department of Plant Protection, Faculty of Agriculture, Harran University, Şanlıurfa 63250, Turkey;
| | - Mubshar Hussain
- Department of Agronomy, Bahauddin Zakariya University, Multan 60800, Pakistan;
- School of Veterinary and Life Sciences, Murdoch University, 90 South Street, Murdoch, WA 6150, Australia
- Correspondence: ; Tel.: +92-301-7164879
| |
Collapse
|
16
|
Kaur P, Sachan S, Sharma A. Weed competitive ability in wheat: a peek through in its functional significance, present status and future prospects. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2021; 27:2165-2179. [PMID: 34744359 PMCID: PMC8526637 DOI: 10.1007/s12298-021-01079-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 09/02/2021] [Accepted: 09/21/2021] [Indexed: 06/13/2023]
Abstract
Weed competitive ability of a crop is one of the most widely explored aspects in the current scenario of aftermaths of synthetic herbicides such as herbicide resistant weeds emergence, residue accumulation in trophic levels; increased demands of organic produce, global climatic shifts, and other environmental issues. Further weed infestations are known to cause much more economic losses relative to crop attacks by pests. To understand the basic characteristics and underlying processes governing the competitive ability of a crop is therefore prudent, particularly in staples such as wheat. We discuss here an overview of the existing attributes of wheat-weed environment, the significance of crop competitiveness and various associated above-ground and below-ground traits (pertaining to early seed vigor and early seedling germination) discerned through biological, classical genetics and high throughput omics toolbox to provide numerous resources in terms of genome and transcriptome sequences, potential QTLs, genetic variation, molecular markers, association mapping studies, and others. Competitiveness is a cumulative response manifested as morphological, physiological, biochemical or allelochemical response ultimately driven through genetic architecture of a crop and its interaction with environment. Development of wheat competitive cultivar thus requires interdisciplinary approaches and germplasm screening to identify potential donors for competitiveness is an attractive and feasible alternative. For which utilization of landraces and other wild species, already proven to house sufficient genetic heterogeneity, thus poses a competitive advantage. Further, the availability of novel breeding techniques such as rapid generation advance could speed up the development of competitive wheat ideotype.
Collapse
Affiliation(s)
- Parampreet Kaur
- School of Organic Farming, Punjab Agricultural University, Ludhiana, Punjab India
| | - Shephali Sachan
- School of Organic Farming, Punjab Agricultural University, Ludhiana, Punjab India
| | - Achla Sharma
- Department of Plant Breeding and Genetics, Punjab Agricultural University, Ludhiana, Punjab India
| |
Collapse
|
17
|
Haywood J, Vadlamani G, Stubbs KA, Mylne JS. Antibiotic resistance lessons for the herbicide resistance crisis. PEST MANAGEMENT SCIENCE 2021; 77:3807-3814. [PMID: 33682995 DOI: 10.1002/ps.6357] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 03/03/2021] [Accepted: 03/08/2021] [Indexed: 05/26/2023]
Abstract
The challenges of resistance to antibiotics and resistance to herbicides have much in common. Antibiotic resistance became a risk in the 1950s, but a concerted global effort to manage it did not begin until after 2000. Widespread herbicide use began during the 1950s and was soon followed by an unabated rise in resistance. Here, we examine what lessons for combatting herbicide resistance could be learnt from the global, coordinated efforts of all stakeholders to avert the antibiotic resistance crisis. © 2021 Society of Chemical Industry.
Collapse
Affiliation(s)
- Joel Haywood
- School of Molecular Sciences, The University of Western Australia, Perth, Australia
- The ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia
| | - Grishma Vadlamani
- School of Molecular Sciences, The University of Western Australia, Perth, Australia
- The ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia
| | - Keith A Stubbs
- School of Molecular Sciences, The University of Western Australia, Perth, Australia
| | - Joshua S Mylne
- School of Molecular Sciences, The University of Western Australia, Perth, Australia
- The ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia
| |
Collapse
|
18
|
Abstract
Worldwide weeds are the cause of the highest potential crop losses (representing on average −34%), even if they are frequently underestimated since more attention is generally paid to dangerous insects (representing on average 18% of yield loss) or pathogens (representing on average 16% of yield loss) [...]
Collapse
|
19
|
De Vrieze J, De Mulder T, Matassa S, Zhou J, Angenent LT, Boon N, Verstraete W. Stochasticity in microbiology: managing unpredictability to reach the Sustainable Development Goals. Microb Biotechnol 2020; 13:829-843. [PMID: 32311222 PMCID: PMC7264747 DOI: 10.1111/1751-7915.13575] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 03/04/2020] [Accepted: 03/25/2020] [Indexed: 01/06/2023] Open
Abstract
Pure (single) cultures of microorganisms and mixed microbial communities (microbiomes) have been important for centuries in providing renewable energy, clean water and food products to human society and will continue to play a crucial role to pursue the Sustainable Development Goals. To use microorganisms effectively, microbial engineered processes require adequate control. Microbial communities are shaped by manageable deterministic processes, but also by stochastic processes, which can promote unforeseeable variations and adaptations. Here, we highlight the impact of stochasticity in single culture and microbiome engineering. First, we discuss the concepts and mechanisms of stochasticity in relation to microbial ecology of single cultures and microbiomes. Second, we discuss the consequences of stochasticity in relation to process performance and human health, which are reflected in key disadvantages and important opportunities. Third, we propose a suitable decision tool to deal with stochasticity in which monitoring of stochasticity and setting the boundaries of stochasticity by regulators are central aspects. Stochasticity may give rise to some risks, such as the presence of pathogens in microbiomes. We argue here that by taking the necessary precautions and through clever monitoring and interpretation, these risks can be mitigated.
Collapse
Affiliation(s)
- Jo De Vrieze
- Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Gent, Belgium
| | | | - Silvio Matassa
- Department of Civil, Architectural and Environmental Engineering, University of Naples Federico II, via Claudio 21, 80125, Naples, Italy
| | - Jizhong Zhou
- Institute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA
| | - Largus T Angenent
- Center for Applied Geosciences, University of Tübingen, Tübingen, Germany
| | - Nico Boon
- Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Gent, Belgium
| | - Willy Verstraete
- Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Gent, Belgium
- Avecom NV, Industrieweg 122P, Wondelgem, 9032, Belgium
| |
Collapse
|
20
|
Reinhardt Piskackova T, Reberg-Horton C, Richardson RJ, Austin R, Jennings KM, Leon RG. Creating Predictive Weed Emergence Models Using Repeat Photography and Image Analysis. PLANTS 2020; 9:plants9050635. [PMID: 32429327 PMCID: PMC7285028 DOI: 10.3390/plants9050635] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Revised: 04/25/2020] [Accepted: 05/12/2020] [Indexed: 11/17/2022]
Abstract
Weed emergence models have the potential to be important tools for automating weed control actions; however, producing the necessary data (e.g., seedling counts) is time consuming and tedious. If similar weed emergence models could be created by deriving emergence data from images rather than physical counts, the amount of generated data could be increased to create more robust models. In this research, repeat RGB images taken throughout the emergence period of Raphanus raphanistrum L. and Senna obtusifolia (L.) Irwin and Barneby underwent pixel-based spectral classification. Relative cumulative pixels generated by the weed of interest over time were used to model emergence patterns. The models that were derived from cumulative pixel data were validated with the relative emergence of true seedling counts. The cumulative pixel model for R. raphanistrum and S. obtusifolia accounted for 92% of the variation in relative emergence of true counts. The results demonstrate that a simple image analysis approach based on time-dependent changes in weed cover can be used to generate weed emergence predictive models equivalent to those produced based on seedling counts. This process will help researchers working on weed emergence models, providing a new low-cost and technologically simple tool for data collection.
Collapse
Affiliation(s)
- Theresa Reinhardt Piskackova
- Department of Crop and Soil Science, North Carolina State University, Raleigh, NC 27695-7620, USA; (T.R.P.); (C.R.-H.); (R.J.R.); (R.A.)
| | - Chris Reberg-Horton
- Department of Crop and Soil Science, North Carolina State University, Raleigh, NC 27695-7620, USA; (T.R.P.); (C.R.-H.); (R.J.R.); (R.A.)
| | - Robert J Richardson
- Department of Crop and Soil Science, North Carolina State University, Raleigh, NC 27695-7620, USA; (T.R.P.); (C.R.-H.); (R.J.R.); (R.A.)
| | - Robert Austin
- Department of Crop and Soil Science, North Carolina State University, Raleigh, NC 27695-7620, USA; (T.R.P.); (C.R.-H.); (R.J.R.); (R.A.)
| | - Katie M Jennings
- Department of Horticulture, North Carolina State University, Raleigh, NC 27695-7609, USA;
| | - Ramon G Leon
- Department of Crop and Soil Science, North Carolina State University, Raleigh, NC 27695-7620, USA; (T.R.P.); (C.R.-H.); (R.J.R.); (R.A.)
- Correspondence:
| |
Collapse
|
21
|
Pardo-Muras M, Puig CG, Souza-Alonso P, Pedrol N. The Phytotoxic Potential of the Flowering Foliage of Gorse ( Ulex europaeus) and Scotch Broom ( Cytisus scoparius), as Pre-Emergent Weed Control in Maize in a Glasshouse Pot Experiment. PLANTS 2020; 9:plants9020203. [PMID: 32041239 PMCID: PMC7076520 DOI: 10.3390/plants9020203] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/26/2019] [Revised: 01/28/2020] [Accepted: 02/03/2020] [Indexed: 11/16/2022]
Abstract
In our previous studies, the phytotoxicity of Ulex europaeus (gorse) and Cytisus scoparius (Scotch broom) was demonstrated in vitro and argued to be caused by the release of volatile and water-soluble compounds from fresh plant foliage. In light of these positive results, there was a need to test the effects ex vitro. In this work, gorse and Scotch broom were used as soil amendments in pot experiments in a glasshouse by incorporating slashed plant material into the soil at a ratio of 1% w/w on a dry mass basis. The phytotoxic effects on the emergence and early growth of maize and five accompanying weed species were analyzed, as were the effect on soil fertility and soil community-level physiological profiles. Thirty days after incorporation, significant decreases in weed density of 32.2% and 59.5% were found for gorse and Scotch broom soil amendments, respectively. Gorse soil amendment was notably effective impairing the establishment of Amaranthus retroflexus and diminishing the plant height of Digitaria sanguinalis and Portulaca oleracea. Scotch broom soil amendment was capable of significantly inhibiting the emergence of D. sanguinalis, Convolvulus arvensis, P. oleracea, and A. retroflexus, with a notable reduction of weed biomass. No undesirable side effects on maize crop or soil quality, including microbial activity, were detected. Our results suggest that the incorporation of gorse and Scotch broom foliage is promising for pre-emergent weed control in maize; however, field trials that support and expand these glasshouse results are essential.
Collapse
Affiliation(s)
- María Pardo-Muras
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310 Vigo, Spain; (M.P.-M.); (C.G.P.); (P.S.-A.)
- CITACA, Agri-Food Research, and Transfer Cluster, Campus da Auga, University of Vigo, 32004 Ourense, Spain
| | - Carolina G. Puig
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310 Vigo, Spain; (M.P.-M.); (C.G.P.); (P.S.-A.)
- CITACA, Agri-Food Research, and Transfer Cluster, Campus da Auga, University of Vigo, 32004 Ourense, Spain
| | - Pablo Souza-Alonso
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310 Vigo, Spain; (M.P.-M.); (C.G.P.); (P.S.-A.)
- Department of Soil Science and Agricultural Chemistry, University of Santiago de Compostela (USC), Escuela Politécnica Superior, 27002 Lugo, Spain
| | - Nuria Pedrol
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310 Vigo, Spain; (M.P.-M.); (C.G.P.); (P.S.-A.)
- CITACA, Agri-Food Research, and Transfer Cluster, Campus da Auga, University of Vigo, 32004 Ourense, Spain
- Correspondence: ; Tel.: +34-986-812-616
| |
Collapse
|
22
|
Perotti VE, Larran AS, Palmieri VE, Martinatto AK, Permingeat HR. Herbicide resistant weeds: A call to integrate conventional agricultural practices, molecular biology knowledge and new technologies. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 290:110255. [PMID: 31779903 DOI: 10.1016/j.plantsci.2019.110255] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Revised: 09/02/2019] [Accepted: 09/03/2019] [Indexed: 05/16/2023]
Abstract
Herbicide resistant (HR) weeds are of major concern in modern agriculture. This situation is exacerbated by the massive adoption of herbicide-based technologies along with the overuse of a few active ingredients to control weeds over vast areas year after year. Also, many other anthropological, biological, and environmental factors have defined a higher rate of herbicide resistance evolution in numerous weed species around the world. This review focuses on two central points: 1) how these factors have affected the resistance evolution process; and 2) which cultural practices and new approaches would help to achieve an effective integrated weed management. We claim that global climate change is an unnoticed factor that may be acting on the selection of HR weeds, especially those evolving into non-target-site resistance mechanisms. And we present several new tools -such as Gene Drive and RNAi technologies- that may be adopted to cope with herbicide resistance spread, as well as discuss their potential application at field level. This is the first review that integrates agronomic and molecular knowledge of herbicide resistance. It covers not only the genetic basis of the most relevant resistance mechanisms but also the strengths and weaknesses of traditional and forthcoming agricultural practices.
Collapse
Affiliation(s)
- Valeria E Perotti
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Alvaro S Larran
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina; Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Valeria E Palmieri
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Andrea K Martinatto
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina
| | - Hugo R Permingeat
- Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina; Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR-CONICET-UNR), Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Campo Experimental Villarino, S2125ZAA, Zavalla, Argentina.
| |
Collapse
|
23
|
The Influence of Herbicide Underdosage on the Composition and Diversity of Weeds in Oilseed Rape (Brassica napus L. var. oleifera D.C.) Mediterranean Fields. SUSTAINABILITY 2019. [DOI: 10.3390/su11061653] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Weed flora is considered harmful for crop growth and yield, but it is fundamental for preserving biodiversity in agroecosystems. Two three-year trials were conducted in Italy (two different sites) to assess the effect of six herbicide treatments on the weed flora structure of an oilseed rape crop. We applied metazachlor during the pre-emergence stage at 25%, 50%, 75%, and 100% of the labelled dose (M25, M50, M75, M100); trifluralin (during the first growing season); post-emergence treatment (PE); and a weedy control (W). Species richness, and diversity indices were used to characterize weed flora composition and to evaluate the effect of herbicide treatments on the considered variables. Results highlighted that the weed community is characterized by a higher diversity in underdosed than in M100 treated plots. Raphanus raphanistrum and Sinapis arvensis were the most common species in M75 and M100 treatments in both sites, while more weed species were detected in underdosed treatments and in weedy plots. The highest Shannon index values were observed in the underdosed treatments. In general, only a slightly similar trend was observed between sites, weed abundance and diversity being positively affected both by low-input herbicide management and by environmental factors (e.g., pedoclimatic situation and previous crop).
Collapse
|
24
|
Ram B, Fartyal D, Sheri V, Varakumar P, Borphukan B, James D, Yadav R, Bhatt A, Agrawal PK, Achary VMM, Reddy MK. Characterization of phoA, a Bacterial Alkaline Phosphatase for Phi Use Efficiency in Rice Plant. FRONTIERS IN PLANT SCIENCE 2019; 10:37. [PMID: 30858852 PMCID: PMC6397861 DOI: 10.3389/fpls.2019.00037] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Accepted: 01/10/2019] [Indexed: 06/09/2023]
Abstract
Fertilizers and herbicides are two major components in the agriculture system for achieving crop productivity. Massive use of orthophosphate fertilizers and herbicides poses threats to phosphate reserves and aids the evolution of herbicide tolerant weed biotypes. Phosphite (Phi), a phosphate analog, has been proposed as more beneficial than traditionally used phosphate fertilizers and herbicides in the agriculture. We developed phoA overexpressing transgenic rice that minimizes the phosphate loss and contributes to weed management in the agriculture. The phoA rice lines showed improved root, shoot length and total biomass production under phosphite conditions. Additionally, the complete phenotype and productivity of phoA lines under the phosphite treatment attained was similar to that of plants under phosphate sufficient condition. The Phi metabolizing properties of the phoA overexpressed lines improved under the Phi application and phi treatment enabled controlling of weeds without compromising the yield of transgenic rice plants. Our results indicated that phoA alone or in combination with other Phi metabolizing gene(s) can possibly be used as an effective ameliorating system for improving crop plants for phi-based fertilization and weed management strategy in the agriculture.
Collapse
Affiliation(s)
- Babu Ram
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
- Department of Biotechnology, Uttarakhand Technical University, Dehradun, India
| | - Dhirendra Fartyal
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
- Department of Biotechnology, Uttarakhand Technical University, Dehradun, India
| | - Vijay Sheri
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| | - Panditi Varakumar
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| | - Bhabesh Borphukan
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| | - Donald James
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| | - Renu Yadav
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| | - Arun Bhatt
- Department of Biotechnology, Govind Ballabh Pant Institute of Engineering and Technology, Pauri Garhwal, India
| | - Pawan K. Agrawal
- National Agricultural Science Fund, Indian Council of Agricultural Research, New Delhi, India
| | - V. Mohan M. Achary
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| | - Malireddy K. Reddy
- Crop Improvement Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India
| |
Collapse
|
25
|
Riemer M, Uzunova VV, Riemer N, Clarkson GJ, Pereira N, Napier R, Shipman M. Phyllostictine A: total synthesis, structural verification and determination of substructure responsible for plant growth inhibition. Chem Commun (Camb) 2018; 54:7211-7214. [PMID: 29897060 PMCID: PMC6018569 DOI: 10.1039/c8cc03349h] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The first total synthesis of phyllostictine A is reported and evidence presented that the heterocyclic subunit is the key to the μM herbicidal activity.
The first total synthesis of phyllostictine A (PA) is reported, which confirms the structure of this fungal metabolite and its (6S,7R,8S)-stereochemistry. Both synthetic PA and an analogue containing the 5-methylene-1,5-dihydro-2H-pyrrol-2-one nucleus exhibit μM inhibitory activity in root growth assays against Arabidopsis thaliana, indicating that this heterocyclic subunit is key to the herbicidal activity of the natural product.
Collapse
Affiliation(s)
- Martin Riemer
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, UK.
| | | | | | | | | | | | | |
Collapse
|