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Garai S, Bhattacharjee C, Sarkar S, Moulick D, Dey S, Jana S, Dhar A, Roy A, Mondal K, Mondal M, Mukherjee S, Ghosh S, Singh P, Ramteke P, Manna D, Hazra S, Malakar P, Banerjee H, Brahmachari K, Hossain A. Microplastics in the soil-water-food nexus: Inclusive insight into global research findings. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 946:173891. [PMID: 38885699 DOI: 10.1016/j.scitotenv.2024.173891] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 06/01/2024] [Accepted: 06/08/2024] [Indexed: 06/20/2024]
Abstract
Nuisance imposed by biotic and abiotic stressors on diverse agroecosystems remains an area of focus for the scientific fraternity. However, emerging contaminants such as microplastics (MP) have imposed additional dimension (alone or in combinations with other stressors) in agroecosystems and keep escalating the challenges to achieve sustainability. MP are recognized as persistent anthropogenic contaminants, fetch global attention due to their unique chemical features that keeps themselves unresponsive to the decaying process. This review has been theorized to assess the current research trends (along with possible gap areas), widespread use of MP, enhancement of the harshness of heavy metals (HMs), complex interactions with physico-chemical constituents of arable soil, accumulation in the edible parts of field crops, dairy products, and other sources to penetrate the food web. So far, the available review articles are oriented to a certain aspect of MP and lack a totality when considered from in soil-water-food perspective. In short, a comprehensive perspective of the adverse effects of MP on human health has been assessed. Moreover, an agro-techno-socio-health prospective-oriented critical assessment of policies and remedial measures linked with MP has provided an extra edge over other similar articles in influential future courses of research.
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Affiliation(s)
- Sourav Garai
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Chandrima Bhattacharjee
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Sukamal Sarkar
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India.
| | - Debojyoti Moulick
- Department of Environmental Science, University of Kalyani, Nadia, West Bengal -741235, India
| | - Saikat Dey
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Soujanya Jana
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Anannya Dhar
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Anirban Roy
- Division of Genetics and Plant Breeding, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Krishnendu Mondal
- Dhaanyaganga Krishi Vigyan Kendra, Ramakrishna Mission Vivekananda Educational and Research Institute, Sargachhi, West Bengal, India
| | - Mousumi Mondal
- School of Agriculture and Allied Sciences, The Neotia University, Sarisha, West Bengal, India
| | - Siddhartha Mukherjee
- Division of Agriculture, Faculty Centre for Agriculture, Rural and Tribal Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Morabadi, Ranchi, Jharkhand, India
| | - Samrat Ghosh
- Emergent Ventures India, Gurugram, Haryana, India
| | - Puja Singh
- Department of Soil Science and Agricultural Chemistry, Natural Resource Management, Horticultural College, Birsa Agricultural University, Khuntpani, Chaibasa, Jharkhand, India
| | - Pratik Ramteke
- Dr. Panjabrao Deshmukh Krishi Vidyapeeth, Akola, MS 444104, India
| | - Dipak Manna
- School of Biological Sciences, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Shreyasee Hazra
- School of Biological Sciences, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Pushkar Malakar
- School of Biological Sciences, Ramakrishna Mission Vivekananda Educational and Research Institute, Kolkata, West Bengal, India
| | - Hirak Banerjee
- Regional Research Station (CSZ), Bidhan Chandra Krishi Viswavidyalaya, Kakdwip, West Bengal, India
| | - Koushik Brahmachari
- Department of Agronomy, Bidhan Chandra Krishi Viswavidyalaya, Mohanpur, West Bengal, India
| | - Akbar Hossain
- Division of Soil Science, Bangladesh Wheat and Maize Research Institute, Dinajpur 5200, Bangladesh
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Kim S, Kim TH. Identification of the Novel Small Compound Stress Response Regulators 1 and 2 That Affect Plant Abiotic Stress Signaling. Biomolecules 2024; 14:1177. [PMID: 39334943 PMCID: PMC11429841 DOI: 10.3390/biom14091177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2024] [Revised: 09/14/2024] [Accepted: 09/17/2024] [Indexed: 09/30/2024] Open
Abstract
Abiotic stresses, such as drought, salinity, and extreme temperatures, limit plant growth and development, reducing crop yields. Therefore, a more comprehensive understanding of the signaling mechanisms and responses of plants to changing environmental conditions is crucial for improving sustainable agricultural productivity. Chemical screening was conducted to find novel small compounds that act as regulators of the abiotic stress signaling pathway using the ABA-inducible transgenic reporter line. Small molecules called stress response regulators (SRRs) were isolated by screening a synthetic library composed of 14,400 small compounds, affecting phenotypes such as seed germination, root growth, and gene expression in response to multiple abiotic stresses. Seeds pretreated with SRR compounds positively affected the germination rate and radicle emergence of Arabidopsis and tomato plants under abiotic stress conditions. The SRR-priming treatment enhanced the transcriptional responses of abiotic stress-responsive genes in response to subsequent salt stress. The isolation of the novel molecules SRR1 and SRR2 will provide a tool to elucidate the complex molecular networks underlying the plant stress-tolerant responses.
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Affiliation(s)
- Seojung Kim
- Department of Bio-Health Convergence, Duksung Women’s University, Seoul 01369, Republic of Korea;
| | - Tae-Houn Kim
- Department of Bio-Health Convergence, Duksung Women’s University, Seoul 01369, Republic of Korea;
- Department of Biotechnology, Duksung Women’s University, Seoul 01369, Republic of Korea
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Bonchuk AN, Georgiev PG. C2H2 proteins: Evolutionary aspects of domain architecture and diversification. Bioessays 2024; 46:e2400052. [PMID: 38873893 DOI: 10.1002/bies.202400052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 05/24/2024] [Accepted: 05/27/2024] [Indexed: 06/15/2024]
Abstract
The largest group of transcription factors in higher eukaryotes are C2H2 proteins, which contain C2H2-type zinc finger domains that specifically bind to DNA. Few well-studied C2H2 proteins, however, demonstrate their key role in the control of gene expression and chromosome architecture. Here we review the features of the domain architecture of C2H2 proteins and the likely origin of C2H2 zinc fingers. A comprehensive investigation of proteomes for the presence of proteins with multiple clustered C2H2 domains has revealed a key difference between groups of organisms. Unlike plants, transcription factors in metazoans contain clusters of C2H2 domains typically separated by a linker with the TGEKP consensus sequence. The average size of C2H2 clusters varies substantially, even between genomes of higher metazoans, and with a tendency to increase in combination with SCAN, and especially KRAB domains, reflecting the increasing complexity of gene regulatory networks.
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Affiliation(s)
- Artem N Bonchuk
- Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russia
- Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia
| | - Pavel G Georgiev
- Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russia
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Chowardhara B, Saha B, Awasthi JP, Deori BB, Nath R, Roy S, Sarkar S, Santra SC, Hossain A, Moulick D. An assessment of nanotechnology-based interventions for cleaning up toxic heavy metal/metalloid-contaminated agroecosystems: Potentials and issues. CHEMOSPHERE 2024; 359:142178. [PMID: 38704049 DOI: 10.1016/j.chemosphere.2024.142178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Revised: 03/22/2024] [Accepted: 04/26/2024] [Indexed: 05/06/2024]
Abstract
Heavy metals (HMs) are among the most dangerous environmental variables for a variety of life forms, including crops. Accumulation of HMs in consumables and their subsequent transmission to the food web are serious concerns for scientific communities and policy makers. The function of essential plant cellular macromolecules is substantially hampered by HMs, which eventually have a detrimental effect on agricultural yield. Among these HMs, three were considered, i.e., arsenic, cadmium, and chromium, in this review, from agro-ecosystem perspective. Compared with conventional plant growth regulators, the use of nanoparticles (NPs) is a relatively recent, successful, and promising method among the many methods employed to address or alleviate the toxicity of HMs. The ability of NPs to reduce HM mobility in soil, reduce HM availability, enhance the ability of the apoplastic barrier to prevent HM translocation inside the plant, strengthen the plant's antioxidant system by significantly enhancing the activities of many enzymatic and nonenzymatic antioxidants, and increase the generation of specialized metabolites together support the effectiveness of NPs as stress relievers. In this review article, to assess the efficacy of various NP types in ameliorating HM toxicity in plants, we adopted a 'fusion approach', in which a machine learning-based analysis was used to systematically highlight current research trends based on which an extensive literature survey is planned. A holistic assessment of HMs and NMs was subsequently carried out to highlight the future course of action(s).
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Affiliation(s)
- Bhaben Chowardhara
- Department of Botany, Faculty of Science and Technology, Arunachal University of Studies, Namsai, Arunachal Pradesh-792103, India.
| | - Bedabrata Saha
- Plant Pathology and Weed Research Department, Newe Ya'ar Research Centre, Agricultural Research Organization, Ramat Yishay-3009500, Israel.
| | - Jay Prakash Awasthi
- Department of Botany, Government College Lamta, Balaghat, Madhya Pradesh 481551, India.
| | - Biswajit Bikom Deori
- Department of Environmental Science, Faculty of Science and Technology, Arunachal University of Studies, Namsai, Arunachal Pradesh 792103, India.
| | - Ratul Nath
- Department of Life-Science, Dibrugarh University, Dibrugarh, Assam-786004, India.
| | - Swarnendu Roy
- Department of Botany, University of North Bengal, P.O.- NBU, Dist- Darjeeling, West Bengal, 734013, India.
| | - Sukamal Sarkar
- Division of Agronomy, School of Agriculture and Rural Development, Ramakrishna Mission Vivekananda Educational and Research Institute, Narendrapur Campus, Kolkata, India.
| | - Subhas Chandra Santra
- Department of Environmental Science, University of Kalyani, Nadia, West Bengal, 741235, India.
| | - Akbar Hossain
- Division of Soil Science, Bangladesh Wheat and Maize Research Institute, Dinajpur 5200, Bangladesh.
| | - Debojyoti Moulick
- Department of Environmental Science, University of Kalyani, Nadia, West Bengal, 741235, India.
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Moulick D, Choudhury S, Brestic M, Hossain A. Editorial: The impact of abiotic stresses on agriculture: mitigation through climate smart strategies. FRONTIERS IN PLANT SCIENCE 2024; 15:1391051. [PMID: 38807784 PMCID: PMC11130485 DOI: 10.3389/fpls.2024.1391051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Accepted: 04/22/2024] [Indexed: 05/30/2024]
Affiliation(s)
- Debojyoti Moulick
- Department of Environmental Science, University of Kalyani, Kalyani, India
| | - Shuvasish Choudhury
- Plant Stress Biology and Metabolomics Laboratory, Department of Life Science and Bioinformatics, Assam University, Silchar, India
| | - Marian Brestic
- Institute of Plant and Environmental Sciences, Slovak University of Agriculture, Nitra, Slovakia
- Department of Botany and Plant Physiology, Czech University of Life Sciences Prague, Prague, Czechia
| | - Akbar Hossain
- Division of Soil Science, Bangladesh Wheat and Maize Research Institute, Dinajpur, Bangladesh
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De Pascali M, Greco D, Vergine M, Carluccio G, De Bellis L, Luvisi A. A Physiological and Molecular Focus on the Resistance of "Filippo Ceo" Almond Tree to Xylella fastidiosa. PLANTS (BASEL, SWITZERLAND) 2024; 13:576. [PMID: 38475423 DOI: 10.3390/plants13050576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Revised: 02/08/2024] [Accepted: 02/19/2024] [Indexed: 03/14/2024]
Abstract
The impact of Xylella fastidiosa (Xf) subsp. pauca on the environment and economy of Southern Italy has been devastating. To restore the landscape and support the local economy, introducing new crops is crucial for restoring destroyed olive groves, and the almond tree (Prunus dulcis Mill. D. A. Webb) could be a promising candidate. This work focused on the resistance of the cultivar "Filippo Ceo" to Xf and evaluated its physiological and molecular responses to individual stresses (drought or pathogen stress) and combined stress factors under field conditions over three seasons. Filippo Ceo showed a low pathogen concentration (≈103 CFU mL-1) and a lack of almond leaf scorch symptoms. Physiologically, an excellent plant water status was observed (RWC 82-89%) regardless of the stress conditions, which was associated with an increased proline content compared to that of the control plants, particularly in response to Xf stress (≈8-fold). The plant's response did not lead to a gene modulation that was specific to different stress factors but seemed more indistinct: upregulation of the LEA and DHN gene transcripts by Xf was observed, while the PR transcript was upregulated by drought stress. In addition, the genes encoding the transcription factors (TFs) were differentially induced by stress conditions. Filippo Ceo could be an excellent cultivar for coexistence with Xf subps. pauca, confirming its resistance to both water stress and the pathogen, although this similar health status was achieved differently due to transcriptional reprogramming that results in the modulation of genes directly or indirectly involved in defence strategies.
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Affiliation(s)
- Mariarosaria De Pascali
- Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy
- National Biodiversity Future Center, 90133 Palermo, Italy
| | - Davide Greco
- Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy
| | - Marzia Vergine
- Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy
| | - Giambattista Carluccio
- Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy
| | - Luigi De Bellis
- Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy
- National Biodiversity Future Center, 90133 Palermo, Italy
| | - Andrea Luvisi
- Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy
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