The Role of Aging and Wind in Inducing Death and/or Growth Reduction in Korean Fir (Abies Koreana Wilson) on Mt. Halla, Korea

Fungal Microbiome of Alive and Dead Korean Fir in its Native Habitats

A rapid decline of Abies koreana has been reported in most of the natural alpine habitats in Korea. It is generally accepted that this phenomenon is due to climate change even though no clear conclusions have been drawn. Most research has focused on abiotic environmental factors, but studies on the relationships between A. koreana and soil fungal microbiomes are scarce. In this study, the rhizoplane and rhizosphere fungal communities in the alive and dead Korean fir trees from its three major natural habitats including Mt. Deogyu, Mt. Halla, and Mt. Jiri in Korea were investigated to identify specific soil fungal groups closely associated with A. koreana. Soil fungal diversity in each study site was significantly different from another based on the beta diversity calculations. Heat tree analysis at the genus level showed that Clavulina, Beauveria, and Tomentella were most abundant in the healthy trees probably by forming ectomycorrhizae with Korean fir growth and controlling pests and diseases. However, Calocera, Dacrymyces, Gyoerffyella, Hydnotrya, Microdochium, Hyaloscypha, Mycosymbioces, and Podospora were abundant in the dead trees. Our findings suggested that Clavulina, Beauveria, and Tomentella are the major players that could be considered in future reforestation programs to establish ectomycorrhizal networks and promote growth. These genera may have played a significant role in the survival and growth of A. koreana in its natural habitats. In particular, the genus Gyoerffyella may account for the death of the seedlings. Our work presented exploratory research on the specific fungal taxa associated with the status of A. koreana.

Aureobasidium pullulans Treatment Mitigates Drought Stress in Abies koreana via Rhizosphere Microbiome Modulation

The Korean fir tree Abies koreana, an endangered species in Korea, faces threats primarily from climate change-induced stress and drought. This study proposed a sustainable method to enhance A. koreana drought tolerance using a black yeast-like fungus identified as Aureobasidium pullulans (AK10). The 16S/ITS metabarcoding analysis assessed the impact of drought and AK10 treatment on the seedlings' rhizosphere microbiome. Results revealed a profound drought influence on the microbiome, particularly affecting fungal mycobiota. Drought-stressed seedlings exhibited elevated Agaricaceae levels, opportunistic fungi generally associated with decomposition. AK10 treatment significantly mitigated this proliferation and increased the relative abundance of beneficial fungi like Cystofilobasidium and Mortierella, known biocontrol agents and phosphate solubilizers. A notable reduction in the phytopathogenic Fusarium levels was observed with AK10, alongside an increase in beneficial bacteria, including Azospirillum and Nitrospirillum. Furthermore, the conducted correlation analysis shed light on microbial interrelationships within the rhizosphere, elucidating potential co-associations and antagonisms. Taken together, the isolated A. pullulans AK10 identified in this study serves as a potential biostimulant, enhancing the drought tolerance in A. koreana through beneficial alterations in the rhizosphere microbiome. This approach presents a promising strategy for the conservation of this endangered species.

Recruitment of the rhizo-microbiome army: assembly determinants and engineering of the rhizosphere microbiome as a key to unlocking plant potential

The viable community of microorganisms in the rhizosphere significantly impacts the physiological development and vitality of plants. The assembly and functional capacity of the rhizosphere microbiome are greatly influenced by various factors within the rhizosphere. The primary factors are the host plant genotype, developmental stage and status, soil properties, and resident microbiota. These factors drive the composition, dynamics, and activity of the rhizosphere microbiome. This review addresses the intricate interplay between these factors and how it facilitates the recruitment of specific microbes by the host plant to support plant growth and resilience under stress. This review also explores current methods for engineering and manipulating the rhizosphere microbiome, including host plant-mediated manipulation, soil-related methods, and microbe-mediated methods. Advanced techniques to harness the plant's ability to recruit useful microbes and the promising use of rhizo-microbiome transplantation are highlighted. The goal of this review is to provide valuable insights into the current knowledge, which will facilitate the development of cutting-edge strategies for manipulating the rhizosphere microbiome for enhanced plant growth and stress tolerance. The article also indicates promising avenues for future research in this field.

Tropical Cyclone Disturbances Induce Contrasting Impacts on Forest Structure, Plant Composition, and Soil Properties in Temperate Broadleaf and Coniferous Forests

Knowledge of forest recovery processes after severe disturbances, such as tropical cyclones, is essential for understanding the mechanisms maintaining forest diversity and ecosystem functioning. However, studies examining the impact of tropical cyclones on forest dynamics are still rare, especially in Northeast Asia. Here, we explore the complex responses of vegetation and soil chemistry to severe tropical cyclone disturbances in Hallasan National Park in South Korea. Vegetation and soil were examined five years before and five years after passages of tropical cyclones in 2012 in natural broadleaf and coniferous forests along an elevation gradient from 950 to 1770 m a.s.l., including the largest population of endemic Abies koreana. Tropical cyclones caused abundant tree mortality, resulting in a 46% decrease in stem basal area. Tropical cyclone disturbances triggered the spread of pioneer trees and shrubs and intense clonal propagation of graminoids, including dwarf bamboo, resulting in less diverse understory vegetation, especially in coniferous forests. In contrast, broadleaf forests at lower elevations experienced only minor disturbance. Opening of canopies after tropical cyclone disturbance led to the decrease in soil cations and doubling of available soil phosphorus stock, which likely contributed to the increased coverage of clonal graminoids, especially in coniferous forests (from 36 to 66%). Hence, increased competition of graminoids and reduction in seed fall and seedling recruitment prevented A. koreana regeneration. The subalpine forest dominated by A. koreana is forecasted to gradual loss due to the fact of temperature increases, intensified tropical cyclones and, particularly, due to the altered competition between dwarf bamboo and fir seedlings.

Two Nothofagus Species in Southernmost South America Are Recording Divergent Climate Signals

Recent climatic trends, such as warming temperatures, decrease in rainfall, and extreme weather events (e.g., heatwaves), are negatively affecting the performance of forests. In northern Patagonia, such conditions have caused tree growth reduction, crown dieback, and massive die-back events. However, studies looking at these consequences in the southernmost temperate forest (Nothofagus betuloides and Nothofagus pumilio) are much scarcer, especially in southernmost South America (SSA). These forests are also under the influence of the positive phase of Antarctic Oscillation (AAO, also known as Southern Annular Mode, SAM) that has been associated with increasing trends in temperature, drought, and extreme events in the last decades. This study evaluated the growth patterns and the climatic response of eight new tree-ring chronologies from Nothofagus species located at the upper treeline along different environmental gradients in three study areas: Punta Arenas, Yendegaia National Park, and Navarino Island in SSA. The main modes of the ring-width index (RWI) variation were studied using principal component analysis (PCA). We found that PC1 has the higher loadings for sites with precipitation values over 600 mm/yr, PC2 with N. betuloides sites, and PC3 with higher loadings for sites with precipitation values below 600 mm/yr. Our best growth-climate relationships are between N. betuloides and AAO and the most northeastern site of N. pumilio with relative humidity (which coincides with heatwaves and extreme drought). The climatic signals imprinted in the southernmost forests are sensitive to climatic variability, the climate forcing AAO, and the effects of climate change in the last decades.

Dysbiosis in the Rhizosphere Microbiome of Standing Dead Korean Fir (Abies koreana)

The Korean fir (Abies koreana), a native coniferous tree species mainly found on Mt. Halla in Jeju, South Korea, is suffering from continuous population decline and has been declared an endangered species. Research efforts have focused on the possible abiotic causes behind this worrying decline. However, the potential link between tree vitality and the rhizosphere microbiome remains unclear. In this study, a comparative metagenomic 16S rRNA sequence analysis was used to investigate the composition of the rhizosphere microbiota of samples collected from healthy and die-back-affected trees on Mt. Halla. The results indicated a significant reduction in the richness and diversity of microbiota in the rhizosphere of die-back-affected trees. Moreover, the relative abundance of Proteobacteria, Actinobacteria, and Bacteroidetes were significantly higher in healthy trees than in standing dead trees. Many bacterial genera were significantly more abundant in the rhizosphere of healthy trees, including those known for promoting plant growth and tolerance to biotic and abiotic stresses (e.g., Bradyrhizobium, Rhizomicrobium, Caulobacter, Nitrosospira, Rhizobacter, Paraburkholderia, Rhizobium, Devosia, Caballeronia, Niveispirillum, Dyella, Herbaspirillum, Frankia, Streptomyces, Actinoallomurus, Lysobacter, Luteibacter, Mucilaginibacter, and Variovorax). To our knowledge, this is the first report on rhizosphere bacterial microbiome dysbiosis in die-back-affected Korean fir trees, suggesting that the influence of rhizosphere microbiota should be considered to save this endangered species by investigating possible intervention strategies in future work.

Selection of Restoration Material for Abies koreana Based on Its Genetic Diversity on Mt. Hallasan

The restoration of damaged or disrupted forests with genetically appropriate restoration planting material that can adapt to future environmental conditions will ensure the conservation of forest genetic resources. Abies koreana is endemic to the Republic of Korea, with declining populations under current environmental changes. In this study, we examined the genetic diversity of its largest population growing on Mt. Hallasan to determine the sampling size of planting material from the population that will ensure 95% coverage of alleles in the population. We evaluated the genetic diversity and spatial genetic structure of three subpopulations of A. koreana on Mt. Hallasan. A total of 456 samples were evaluated using 10 microsatellites. The observed heterozygosity and expected heterozygosity were 0.538 and 0.614 at the population level, respectively. The differences among the subpopulations accounted for 4% of the total variance. Intervals between individuals of the sample to be extracted were based on the two-target distance (5 and 10 m) inferred from the spatial genetic structure. Through random sampling methods considering the target distance, we showed that genetic diversity can be captured by obtaining at least 35 individuals in the population of A. koreana on Mt. Hallasan.