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Park J, Mannaa M, Han G, Jung H, Jeon HS, Kim JC, Park AR, Seo YS. Transcriptomic Insights into Abies koreana Drought Tolerance Conferred by Aureobasidium pullulans AK10. Plant Pathol J 2024; 40:30-39. [PMID: 38326956 PMCID: PMC10850533 DOI: 10.5423/ppj.ft.11.2023.0161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 11/30/2023] [Accepted: 12/03/2023] [Indexed: 02/09/2024]
Abstract
The conservation of the endangered Korean fir, Abies koreana, is of critical ecological importance. In our previous study, a yeast-like fungus identified as Aureobasidium pullulans AK10, was isolated and shown to enhance drought tolerance in A. koreana seedlings. In this study, the effectiveness of Au. pullulans AK10 treatment in enhancing drought tolerance in A. koreana was confirmed. Furthermore, using transcriptome analysis, we compared A. koreana seedlings treated with Au. pullulans AK10 to untreated controls under drought conditions to elucidate the molecular responses involved in increased drought tolerance. Our findings revealed a predominance of downregulated genes in the treated seedlings, suggesting a strategic reallocation of resources to enhance stress defense. Further exploration of enriched Kyoto Encyclopedia of Genes and Genomes pathways and protein-protein interaction networks revealed significant alterations in functional systems known to fortify drought tolerance, including the terpenoid backbone biosynthesis, calcium signaling pathway, pyruvate metabolism, brassinosteroid biosynthesis, and, crucially, flavonoid biosynthesis, renowned for enhancing plant drought resistance. These findings deepen our comprehension of how AK10 biostimulation enhances the resilience of A. koreana to drought stress, marking a substantial advancement in the effort to conserve this endangered tree species through environmentally sustainable treatment.
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Affiliation(s)
- Jungwook Park
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
- Biotechnology Research Division, National Institute of Fisheries Science, Busan 46083, Korea
| | - Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
- Department of Plant Pathology, Cairo University, Faculty of Agriculture, Giza 12613, Egypt
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
- Biotechnology Research Division, National Institute of Fisheries Science, Busan 46083, Korea
| | - Hyo Seong Jeon
- Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, College of Agriculture and Life Science, Chonnam National University, Gwangju 61186, Korea
| | - Jin-Cheol Kim
- Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, College of Agriculture and Life Science, Chonnam National University, Gwangju 61186, Korea
| | - Ae Ran Park
- Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, College of Agriculture and Life Science, Chonnam National University, Gwangju 61186, Korea
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
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Mannaa M, Han G, Jeong T, Kang M, Lee D, Jung H, Seo YS. Taxonomy-guided selection of Paraburkholderia busanensis sp. nov.: a versatile biocontrol agent with mycophagy against Colletotrichum scovillei causing pepper anthracnose. Microbiol Spectr 2023; 11:e0242623. [PMID: 37861313 PMCID: PMC10715207 DOI: 10.1128/spectrum.02426-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Accepted: 09/04/2023] [Indexed: 10/21/2023] Open
Abstract
IMPORTANCE Traditional control methods for postharvest diseases rely on fungicides, which cause human health and environmental concerns. This study introduces a taxonomy-guided strategy for selecting biocontrol agents. By focusing on Paraburkholderia group, which harbors diverse plant-beneficial strains, the inadvertent selection of harmful strains was circumvented, thereby obviating the need for laborious in vitro screening assays. A highly promising candidate, strain P39, has been identified, exhibiting remarkable biocontrol activity against Colletotrichum scovillei. Through comprehensive genomic, physiological, and biochemical analyses, P39 was characterized as a novel species within the Paraburkholderia genus and designated Paraburkholderia busanensis. Moreover, these findings deepen our understanding of bacterial-fungal interactions, as they elucidate a potential pathway for the utilization of fungal chitin, thereby enhancing our understanding of bacterial mycophagy. P. busanensis is a promising source of antifungal volatiles and putative novel secondary metabolites.
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Affiliation(s)
- Mohamed Mannaa
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
- Department of Plant Pathology, Faculty of Agriculture, Cairo University, Giza, Egypt
| | - Gil Han
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Taeho Jeong
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Minhee Kang
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Duyoung Lee
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Hyejung Jung
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Young-Su Seo
- Department of Microbiology, Pusan National University, Busan, South Korea
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
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Mannaa M, Han G, Jung H, Park J, Kim JC, Park AR, Seo YS. Aureobasidium pullulans Treatment Mitigates Drought Stress in Abies koreana via Rhizosphere Microbiome Modulation. Plants (Basel) 2023; 12:3653. [PMID: 37896116 PMCID: PMC10610362 DOI: 10.3390/plants12203653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 10/20/2023] [Accepted: 10/22/2023] [Indexed: 10/29/2023]
Abstract
The Korean fir tree Abies koreana, an endangered species in Korea, faces threats primarily from climate change-induced stress and drought. This study proposed a sustainable method to enhance A. koreana drought tolerance using a black yeast-like fungus identified as Aureobasidium pullulans (AK10). The 16S/ITS metabarcoding analysis assessed the impact of drought and AK10 treatment on the seedlings' rhizosphere microbiome. Results revealed a profound drought influence on the microbiome, particularly affecting fungal mycobiota. Drought-stressed seedlings exhibited elevated Agaricaceae levels, opportunistic fungi generally associated with decomposition. AK10 treatment significantly mitigated this proliferation and increased the relative abundance of beneficial fungi like Cystofilobasidium and Mortierella, known biocontrol agents and phosphate solubilizers. A notable reduction in the phytopathogenic Fusarium levels was observed with AK10, alongside an increase in beneficial bacteria, including Azospirillum and Nitrospirillum. Furthermore, the conducted correlation analysis shed light on microbial interrelationships within the rhizosphere, elucidating potential co-associations and antagonisms. Taken together, the isolated A. pullulans AK10 identified in this study serves as a potential biostimulant, enhancing the drought tolerance in A. koreana through beneficial alterations in the rhizosphere microbiome. This approach presents a promising strategy for the conservation of this endangered species.
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Affiliation(s)
- Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea; (M.M.); (G.H.); (H.J.)
- Department of Plant Pathology, Faculty of Agriculture, Cairo University, Giza 12613, Egypt
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea; (M.M.); (G.H.); (H.J.)
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea; (M.M.); (G.H.); (H.J.)
| | - Jungwook Park
- Biotechnology Research Division, National Institute of Fisheries Science, Busan 46083, Republic of Korea;
| | - Jin-Cheol Kim
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Republic of Korea; (J.-C.K.); (A.R.P.)
| | - Ae Ran Park
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Republic of Korea; (J.-C.K.); (A.R.P.)
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Republic of Korea; (M.M.); (G.H.); (H.J.)
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Tian S, Liu Y, Mao X, Xu X, Wang C, Han G, Yang Y, Wang J, He SM, Zhang W. A Multicenter Study on Deep Learning for Glioblastoma Auto-Segmentation with Prior Knowledge in Multimodal Imaging. Int J Radiat Oncol Biol Phys 2023; 117:e488. [PMID: 37785541 DOI: 10.1016/j.ijrobp.2023.06.2299] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
PURPOSE/OBJECTIVE(S) A precise radiotherapy plan is required to ensure accurate delineation of gross tumor volumes (GTV) and clinical target volumes (CTV1 and CTV2) of glioblastomas (GBMs). However, traditional manual delineation is labor intensive and highly dependent on oncologists' experience. To construct and evaluate a deep learning-based automatic delineation method using prior knowledge in multimodal medical imaging to automate precise GTV, CTV1 and CTV2 contouring in GBM patients. MATERIALS/METHODS We retrospectively collected the CT and MRI scans of 55 eligible patients with histologically proven high-grade glioma (HGG) from an institute, these scans were performed with non-enhanced CT (CT), contrast-enhanced T1-weighted (T1C) and T2-FLAIR (T2F) sequences. We proposed a two-stage automatic segmentation framework (PKMI-Net) for GTV, CTV1 and CTV2 based on deep learning using prior knowledge in multimodal medical imaging, and its segmentation performance was evaluated with dice similarity coefficient (DSC), 95% Harsdorff distance (HD95), average surface distance (ASD) and relative volume difference (RVD). To further investigate the generalizability of our method, we designed and conducted two evaluation strategies (Mix and Cross) on four multicenter datasets (including 55 patients, 37 patients, 21 patients and 35 patients). RESULTS The evaluation results with an 11-patient test set from the single institute were summarized in Table 1, the proposed method demonstrated the best accuracy in segmenting, respectively, GTV, CTV1 and CTV, achieving a DSC of 0.94, 0.95 and 0.92; HD95 of 2.07 mm, 1.18 mm and 3.80 mm; ASD of 0.69 mm, 0.39 mm and 1.13 mm and RVE of 5.50%, 3.97% and 9.68%. In the multicenter evaluation, the segmentation performance of our method implemented with the Cross strategy was comparable to that with the Mix strategy, demonstrating that our method had high and stable generalizability across multicenter datasets in automatically segmenting GTV, CTV1 and CTV2. CONCLUSION Our proposed method achieved promising results in automatically segmenting gliomas across various datasets, which could improve the quality and efficiency of glioblastoma radiotherapy.
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Affiliation(s)
- S Tian
- Department of Radiation Oncology, Peking University Third Hospital, Beijing, China
| | - Y Liu
- United Imaging Research Institute of Innovative Medical Equipment, Shenzhen, China
| | - X Mao
- Radiotherapy Center, People's Hospital of Xinjiang Uygur Autonomous Region, Urumqi, China
| | - X Xu
- Department of Radiation Oncology, The Second Affiliated Hospital of Shandong First Medical University, Tai'an, China
| | - C Wang
- Department of Oncology, Sanya Central Hospital, Sanya, China
| | - G Han
- Department of Radiation Oncology, Hubei Cancer Hospital, Wuhan, China
| | - Y Yang
- Department of Radiation Oncology, Peking University International Hospital, Beijing, China
| | - J Wang
- Department of Radiation Oncology, Peking University Third Hospital, Beijing, China
| | - S M He
- United Imaging Research Institute of Intelligent Imaging, Beijing, China
| | - W Zhang
- Shanghai United Imaging Healthcare Technology Co., Ltd, ShangHai, China
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Paulson K, Logie N, Han G, Tilley D, Menon G, Menon A, Nelson G, Phan T, Murray B, Ghosh S, Pearcey R, Huang F, Wiebe E. Adjuvant Radiotherapy in Stage II Endometrial Cancer: Selective De-intensification of Adjuvant Treatment. Clin Oncol (R Coll Radiol) 2023; 35:e94-e102. [PMID: 36150980 DOI: 10.1016/j.clon.2022.08.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Revised: 06/15/2022] [Accepted: 08/24/2022] [Indexed: 01/04/2023]
Abstract
AIMS Risk stratification, including nodal assessment, allows for selective de-intensification of adjuvant radiotherapy in stage II endometrial cancer. Patterns of treatment and clinical outcomes, including the use of reduced volume 'mini-pelvis' radiotherapy fields, were evaluated in a population-based study. MATERIALS AND METHODS All patients diagnosed with pathological stage II endometrial cancer between 2000 and 2014, and received adjuvant radiotherapy in a regional healthcare jurisdiction were reviewed. Registry data were supplemented by a comprehensive review of patient demographics, disease characteristics and treatment details. The Charlson Comorbidity Score was calculated. Survival and recurrence data were analysed. RESULTS In total, 264 patients met the inclusion criteria. Most patients had endometrioid histology (83%); 41% of patients had International Federation of Gynecologists and Obstetricians grade 1 disease. Half (49%) had surgical nodal evaluation; 11% received chemotherapy. Most patients (59%) were treated with full pelvic radiotherapy fields ± brachytherapy. Seventeen per cent of patients received mini-pelvis radiotherapy ± brachytherapy, whereas 24% received brachytherapy alone. Five-year recurrence-free survival was 87% for the entire cohort, with no significant difference by adjuvant radiotherapy approach. Only one patient receiving mini-pelvis radiotherapy ± brachytherapy recurred in the pelvis but outside of the mini-pelvis field. Recorded late toxicity rates were highest for full pelvis radiotherapy + brachytherapy. CONCLUSION Risk stratification in a real-world setting allowed for selective de-intensification of adjuvant radiation with equivalent outcomes for stage II endometrial cancer. Mini-pelvis radiotherapy combined with brachytherapy is effective in highly selected patients, with the potential to decrease toxicity without compromising local control. Brachytherapy should be considered in low-risk stage II patients.
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Affiliation(s)
- K Paulson
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - N Logie
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - G Han
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - D Tilley
- Cancer Control, Alberta Health Services, Holy Cross Centre, Calgary, Alberta, Canada
| | - G Menon
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - A Menon
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - G Nelson
- Cancer Control, Alberta Health Services, Holy Cross Centre, Calgary, Alberta, Canada
| | - T Phan
- Department of Oncology, University of Calgary, Calgary, Alberta, Canada
| | - B Murray
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - S Ghosh
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - R Pearcey
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - F Huang
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada
| | - E Wiebe
- Department of Oncology, University of Alberta, Edmonton, Alberta, Canada.
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Han G, Bi J, Ma J, Yuan M, Li Y, Pi G, Li Y, Hu D. 146P Stereotactic body radiotherapy plus anlotinib ± toripalimab in untreated oligometastatic brain metastases NSCLC patients. Immuno-Oncology and Technology 2022. [DOI: 10.1016/j.iotech.2022.100258] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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Wu YL, Zhou Q, Pan Y, Yang X, Zhao Y, Han G, Pang Q, Zhang Z, Wang Q, Yao J, Wang H, Yang W, Liu B, Chen Q, Du X, Cai K, Li B, Shuang J, Song L, Shi W. LBA5 A phase II study of neoadjuvant SHR-1701 with or without chemotherapy (chemo) followed by surgery or radiotherapy (RT) in stage III unresectable NSCLC (uNSCLC). Immuno-Oncology and Technology 2022. [DOI: 10.1016/j.iotech.2022.100361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Baker CC, Wu BT, Han G, Flynn AN, Creinin MD. P042Early pregnancy loss medical management in clinical practice after mifepristone-misoprostol clinical trial. Contraception 2022. [DOI: 10.1016/j.contraception.2022.09.066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Park J, Jung H, Mannaa M, Lee SY, Lee HH, Kim N, Han G, Park DS, Lee SW, Lee SW, Seo YS. Genome-guided comparative in planta transcriptome analyses for identifying cross-species common virulence factors in bacterial phytopathogens. Front Plant Sci 2022; 13:1030720. [PMID: 36466249 PMCID: PMC9709210 DOI: 10.3389/fpls.2022.1030720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Accepted: 10/31/2022] [Indexed: 06/17/2023]
Abstract
Plant bacterial disease is a complex outcome achieved through a combination of virulence factors that are activated during infection. However, the common virulence factors across diverse plant pathogens are largely uncharacterized. Here, we established a pan-genome shared across the following plant pathogens: Burkholderia glumae, Ralstonia solanacearum, and Xanthomonas oryzae pv. oryzae. By overlaying in planta transcriptomes onto the pan-genome, we investigated the expression profiles of common genes during infection. We found over 70% of identical patterns for genes commonly expressed by the pathogens in different plant hosts or infection sites. Co-expression patterns revealed the activation of a signal transduction cascade to recognize and respond to external changes within hosts. Using mutagenesis, we uncovered a relationship between bacterial virulence and functions highly conserved and shared in the studied genomes of the bacterial phytopathogens, including flagellar biosynthesis protein, C4-dicarboxylate ABC transporter, 2-methylisocitrate lyase, and protocatechuate 3,4-dioxygenase (PCD). In particular, the disruption of PCD gene led to attenuated virulence in all pathogens and significantly affected phytotoxin production in B. glumae. This PCD gene was ubiquitously distributed in most plant pathogens with high homology. In conclusion, our results provide cross-species in planta models for identifying common virulence factors, which can be useful for the protection of crops against diverse pathogens.
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Affiliation(s)
- Jungwook Park
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
- Biotechnology Research Division, National Institute of Fisheries Science, Busan, South Korea
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Seung Yeup Lee
- Department of Applied Bioscience, Dong-A University, Busan, South Korea
| | - Hyun-Hee Lee
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Namgyu Kim
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Dong-Soo Park
- Paddy Crop Division, National Institute of Crop Science, Rural Development Administration, Miryang, South Korea
| | - Sang-Won Lee
- Department of Plant Molecular Systems Biotech & Crop Biotech Institute, KyungHee University, Yongin, South Korea
| | - Seon-Woo Lee
- Department of Applied Bioscience, Dong-A University, Busan, South Korea
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
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Zeng Y, Cai X, Li J, Ye J, Han G, Luo W, WU C, Qin S, GU W, Zhao S, Zhao Y, Xia B, Du X, Liu Y, Fu X. Postoperative Radiotherapy Involving Tumor Bed with or without Elective Nodal Irradiation in Patients with Locally Advanced Esophageal Squamous Cell Carcinoma: A Multi-Center, Prospective Randomized Phase II Trial. Int J Radiat Oncol Biol Phys 2022. [DOI: 10.1016/j.ijrobp.2022.07.561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Fan Y, Zhu J, He J, Zhou R, Chen J, Han G, Ren B. 367P High-dose aumolertinib in EGFR-mutant NSCLC patients with brain metastases: Primary data from ACHIEVE. Ann Oncol 2022. [DOI: 10.1016/j.annonc.2022.10.405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2022] Open
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Jung H, Kim HS, Han G, Park J, Seo YS. Comparative Analyses of Four Complete Genomes in Pseudomonas amygdali Revealed Differential Adaptation to Hostile Environments and Secretion Systems. Plant Pathol J 2022; 38:167-174. [PMID: 35385921 PMCID: PMC9343901 DOI: 10.5423/ppj.nt.11.2021.0175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 03/03/2022] [Accepted: 03/10/2022] [Indexed: 06/14/2023]
Abstract
Pseudomonas amygdali is a hemibiotrophic phytopathogen that causes disease in woody and herbaceous plants. Complete genomes of four P. amygdali pathovars were comparatively analyzed to decipher the impact of genomic diversity on host colonization. The pan-genome indicated that 3,928 core genes are conserved among pathovars, while 504-1,009 are unique to specific pathovars. The unique genome contained many mobile elements and exhibited a functional distribution different from the core genome. Genes involved in O-antigen biosynthesis and antimicrobial peptide resistance were significantly enriched for adaptation to hostile environments. While the type III secretion system was distributed in the core genome, unique genomes revealed a different organization of secretion systems as follows: type I in pv. tabaci, type II in pv. japonicus, type IV in pv. morsprunorum, and type VI in pv. lachrymans. These findings provide genetic insight into the dynamic interactions of the bacteria with plant hosts.
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Affiliation(s)
- Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Hong-Seop Kim
- Korea Seed & Variety Service, Pyeongchang 25343, Korea
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Jungwook Park
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
- Environmental Microbiology Research Team, Nakdonggang National Institute of Biological Resources (NNIBR), Sangju 37242, Korea
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
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Li F, Lozier MS, Bacon S, Bower AS, Cunningham SA, de Jong MF, deYoung B, Fraser N, Fried N, Han G, Holliday NP, Holte J, Houpert L, Inall ME, Johns WE, Jones S, Johnson C, Karstensen J, Le Bras IA, Lherminier P, Lin X, Mercier H, Oltmanns M, Pacini A, Petit T, Pickart RS, Rayner D, Straneo F, Thierry V, Visbeck M, Yashayaev I, Zhou C. Author Correction: Subpolar North Atlantic western boundary density anomalies and the Meridional Overturning Circulation. Nat Commun 2022; 13:739. [PMID: 35110553 PMCID: PMC8810834 DOI: 10.1038/s41467-022-28397-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- F Li
- State Key Laboratory of Marine Environmental Science & College of Ocean and Earth Sciences, Xiamen University, Xiamen, China. .,School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA.
| | - M S Lozier
- School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA.
| | - S Bacon
- National Oceanography Centre, Southampton, UK
| | - A S Bower
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | | | - M F de Jong
- NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands
| | - B deYoung
- Department of Physics and Physical Oceanography, Memorial University, St. John's, NL, Canada
| | - N Fraser
- Scottish Association for Marine Science, Oban, UK
| | - N Fried
- NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands
| | - G Han
- Fisheries and Oceans Canada, Institute of Ocean Sciences, Sidney, BC, Canada.,Fisheries and Oceans Canada, Northwest Atlantic Fisheries Centre, St. John's, NL, Canada
| | | | - J Holte
- Scripps Institution of Oceanography, UCSD, La Jolla, CA, USA
| | - L Houpert
- National Oceanography Centre, Southampton, UK
| | - M E Inall
- Scottish Association for Marine Science, Oban, UK.,School of Geosciences, Edinburgh University, Edinburgh, UK
| | - W E Johns
- Department of Ocean Sciences, University of Miami, Miami, FL, USA
| | - S Jones
- Scottish Association for Marine Science, Oban, UK
| | - C Johnson
- Scottish Association for Marine Science, Oban, UK
| | - J Karstensen
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - I A Le Bras
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA.,Scripps Institution of Oceanography, UCSD, La Jolla, CA, USA
| | - P Lherminier
- Univ. Brest, Ifremer, CNRS, IRD, Laboratoire d'Océanographie Physique et Spatiale, Plouzané, France
| | - X Lin
- Frontier Science Center for Deep Ocean Multispheres and Earth System and Physical Oceanography Laboratory, Ocean University of China, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China
| | - H Mercier
- CNRS, Laboratoire d'Océanographie Physique et Spatiale, Plouzané, France
| | - M Oltmanns
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - A Pacini
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - T Petit
- School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA
| | - R S Pickart
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - D Rayner
- National Oceanography Centre, Southampton, UK
| | - F Straneo
- Scripps Institution of Oceanography, UCSD, La Jolla, CA, USA
| | - V Thierry
- Univ. Brest, Ifremer, CNRS, IRD, Laboratoire d'Océanographie Physique et Spatiale, Plouzané, France
| | - M Visbeck
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - I Yashayaev
- Bedford Institute of Oceanography, Dartmouth, NS, Canada
| | - C Zhou
- Frontier Science Center for Deep Ocean Multispheres and Earth System and Physical Oceanography Laboratory, Ocean University of China, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China
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Jeon HW, Park AR, Sung M, Kim N, Mannaa M, Han G, Kim J, Koo Y, Seo YS, Kim JC. Systemic Acquired Resistance-Mediated Control of Pine Wilt Disease by Foliar Application With Methyl Salicylate. Front Plant Sci 2022; 12:812414. [PMID: 35069670 PMCID: PMC8767056 DOI: 10.3389/fpls.2021.812414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Accepted: 12/13/2021] [Indexed: 06/14/2023]
Abstract
Pine wilt disease (PWD), caused by the pinewood nematode, is the most destructive disease in pine forest ecosystems worldwide. Extensive research has been done on PWD, but effective disease management is yet to be devised. Generally, plants can resist pathogen attack via a combination of constitutive and inducible defenses. Systemic acquired resistance (SAR) is an inducible defense that occurs by the localized infection of pathogens or treatment with elicitors. To manage PWD by SAR in pine trees, we tested previously known 12 SAR elicitors. Among them, methyl salicylate (MeSA) was found to induce resistance against PWD in Pinus densiflora seedlings. In addition, the foliar applications of the dispersible concentrate-type formulation of MeSA (MeSA 20 DC) and the emulsifiable concentrate-type formulation of MeSA (MeSA 20 EC) resulted in significantly reduced PWD in pine seedlings. In the field test using 10-year-old P. densiflora trees, MeSA 20 DC showed a 60% decrease in the development of PWD. Also, MeSA 20 EC gave the best results when applied at 0.1 mM concentration 2 and 1 weeks before pinewood nematode (PWN) inoculation in pine seedlings. qRT-PCR analysis confirmed that MeSA induced the expression of defense-related genes, indicating that MeSA can inhibit and delay the migration and reproduction of PWN in pine seedlings by modulating gene expression. These results suggest that foliar application of MeSA could reduce PWD incidence by inducing resistance and provide an economically feasible alternative to trunk-injection agents for PWD management.
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Affiliation(s)
- Hee Won Jeon
- Department of Agricultural Chemistry, College of Agriculture and Life Sciences, Institute of Environmentally Friendly Agriculture, Chonnam National University, Gwangju, South Korea
| | - Ae Ran Park
- Department of Agricultural Chemistry, College of Agriculture and Life Sciences, Institute of Environmentally Friendly Agriculture, Chonnam National University, Gwangju, South Korea
| | - Minjeong Sung
- Department of Agricultural Chemistry, College of Agriculture and Life Sciences, Institute of Environmentally Friendly Agriculture, Chonnam National University, Gwangju, South Korea
| | - Namgyu Kim
- Department of Integrated Biological Science, College of Natural Science, Pusan National University, Busan, South Korea
| | - Mohamed Mannaa
- Department of Integrated Biological Science, College of Natural Science, Pusan National University, Busan, South Korea
| | - Gil Han
- Department of Integrated Biological Science, College of Natural Science, Pusan National University, Busan, South Korea
| | - Junheon Kim
- Forest Insect Pests and Diseases Division, National Institute of Forest Science, Seoul, South Korea
| | - Yeonjong Koo
- Department of Agricultural Chemistry, College of Agriculture and Life Sciences, Institute of Environmentally Friendly Agriculture, Chonnam National University, Gwangju, South Korea
| | - Young-Su Seo
- Department of Integrated Biological Science, College of Natural Science, Pusan National University, Busan, South Korea
| | - Jin-Cheol Kim
- Department of Agricultural Chemistry, College of Agriculture and Life Sciences, Institute of Environmentally Friendly Agriculture, Chonnam National University, Gwangju, South Korea
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15
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Kim N, Han G, Jung H, Lee HH, Park J, Seo YS. T6SS Accessory Proteins, Including DUF2169 Domain-Containing Protein and Pentapeptide Repeats Protein, Contribute to Bacterial Virulence in T6SS Group_5 of Burkholderia glumae BGR1. Plants 2021; 11:plants11010034. [PMID: 35009038 PMCID: PMC8747328 DOI: 10.3390/plants11010034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Revised: 12/21/2021] [Accepted: 12/21/2021] [Indexed: 11/23/2022]
Abstract
Burkholderia glumae are bacteria pathogenic to rice plants that cause a disease called bacterial panicle blight (BPB) in rice panicles. BPB, induced by B. glumae, causes enormous economic losses to the rice agricultural industry. B. glumae also causes bacterial disease in other crops because it has various virulence factors, such as toxins, proteases, lipases, extracellular polysaccharides, bacterial motility, and bacterial secretion systems. In particular, B. glumae BGR1 harbors type VI secretion system (T6SS) with functionally distinct roles: the prokaryotic targeting system and the eukaryotic targeting system. The functional activity of T6SS requires 13 core components and T6SS accessory proteins, such as adapters containing DUF2169, DUF4123, and DUF1795 domains. There are two genes, bglu_1g23320 and bglu_2g07420, encoding the DUF2169 domain-containing protein in the genome of B. glumae BGR1. bglu_2g07420 belongs to the gene cluster of T6SS group_5 in B. glumae BGR1, whereas bglu_1g23320 does not belong to any T6SS gene cluster in B. glumae BGR1. T6SS group_5 of B. glumae BGR1 is involved in bacterial virulence in rice plants. The DUF2169 domain-containing protein with a single domain can function by itself; however, Δu1g23320 showed no attenuated virulence in rice plants. In contrast, Δu2g07420DUF2169 and Δu2g07420PPR did exhibit attenuated virulence in rice plants. These results suggest that the pentapeptide repeats region of the C-terminal additional domain, as well as the DUF2169 domain, is required for complete functioning of the DUF2169 domain-containing protein encoded by bglu_2g07420. bglu_2g07410, which encodes the pentapeptide repeats protein, composed of only the pentapeptide repeats region, is located downstream of bglu_2g07420. Δu2g07410 also shows attenuated virulence in rice plants. This finding suggests that the pentapeptide repeats protein, encoded by bglu_2g07410, is involved in bacterial virulence. This study is the first report that the DUF2169 domain-containing protein and pentapeptide repeats protein are involved in bacterial virulence to the rice plants as T6SS accessory proteins, encoded in the gene cluster of the T6SS group_5.
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Affiliation(s)
- Namgyu Kim
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (N.K.); (G.H.); (H.J.); (H.-H.L.)
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (N.K.); (G.H.); (H.J.); (H.-H.L.)
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (N.K.); (G.H.); (H.J.); (H.-H.L.)
| | - Hyun-Hee Lee
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (N.K.); (G.H.); (H.J.); (H.-H.L.)
| | - Jungwook Park
- Environmental Microbiology Research Team, Nakdonggang National Institute of Biological, Resources (NNIBR), Sangju 37242, Korea;
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (N.K.); (G.H.); (H.J.); (H.-H.L.)
- Correspondence:
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16
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Han G, Bi J, Ma J, Yuan M, Li Y, Pi G, Guo L, Li Y, Hu D. 115TiP Stereotactic body radiotherapy (SBRT) plus anlotinib with or without toripalimab in driver mutation-negative non-small cell lung cancer (NSCLC) patients with untreated brain oligometastatic metastases: A prospective, single-center, phase Ib study. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.10.133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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17
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Mannaa M, Han G, Seo YS, Park I. Evolution of Food Fermentation Processes and the Use of Multi-Omics in Deciphering the Roles of the Microbiota. Foods 2021; 10:2861. [PMID: 34829140 PMCID: PMC8618017 DOI: 10.3390/foods10112861] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 11/11/2021] [Accepted: 11/17/2021] [Indexed: 12/22/2022] Open
Abstract
Food fermentation has been practised since ancient times to improve sensory properties and food preservation. This review discusses the process of fermentation, which has undergone remarkable improvement over the years, from relying on natural microbes and spontaneous fermentation to back-slopping and the use of starter cultures. Modern biotechnological approaches, including genome editing using CRISPR/Cas9, have been investigated and hold promise for improving the fermentation process. The invention of next-generation sequencing techniques and the rise of meta-omics tools have advanced our knowledge on the characterisation of microbiomes involved in food fermentation and their functional roles. The contribution and potential advantages of meta-omics technologies in understanding the process of fermentation and examples of recent studies utilising multi-omics approaches for studying food-fermentation microbiomes are reviewed. Recent technological advances in studying food fermentation have provided insights into the ancient wisdom in the practice of food fermentation, such as the choice of substrates and fermentation conditions leading to desirable properties. This review aims to stimulate research on the process of fermentation and the associated microbiomes to produce fermented food efficiently and sustainably. Prospects and the usefulness of recent advances in molecular tools and integrated multi-omics approaches are highlighted.
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Affiliation(s)
- Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.)
- Department of Plant Pathology, Cairo University, Giza 12613, Egypt
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.)
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.)
| | - Inmyoung Park
- School of Culinary Arts, Youngsan University, Busan 48015, Korea
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18
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Mi P, Yuan F, Guo J, Han G, Wang B. Salt glands play a pivotal role in the salt resistance of four recretohalophyte Limonium Mill. species. Plant Biol (Stuttg) 2021; 23:1063-1073. [PMID: 33969585 DOI: 10.1111/plb.13284] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 03/10/2021] [Indexed: 05/25/2023]
Abstract
Limonium Mill. plants are typical recretohalophytes, as they withstand salt stress by secreting excess salt onto the leaf surface through salt glands. However, little is known on the salinity thresholds of these plants and the function of salt glands in salt tolerance. Here, we investigated the salinity thresholds of salt tolerance of the Limonium species L. aureum (Linn.) Hill, L. gmelinii (Willd.) Kuntze, L. otolepis (Schrenk) Kuntze and L. sinuatum (L.) Mill grown with various concentrations of NaCl. The salinity thresholds of L. otolepis, L. aureum, L. sinuatum and L. gmelinii were 300, 350, 400 and 420 mm NaCl, respectively. Correlation analysis indicated that total dry weight, chlorophyll content and intercellular CO2 concentration were highly positively correlated with the total fresh weights of all four Limonium species and could therefore be used as indicators of plant salt tolerance. Furthermore, as the salt gland density on the leaf surface increased, the rate of salt secretion per salt gland also increased, allowing more Na+ to be secreted from the plant. Redundancy discriminant analysis indicated that salt gland density, Na+ content and Na+ secretion rate per salt gland were positively correlated with salt concentration. These observations support the notion that salt glands play important roles in the adaptation of Limonium species to high salinity conditions.
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Affiliation(s)
- P Mi
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, China
| | - F Yuan
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, China
| | - J Guo
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, China
| | - G Han
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, China
| | - B Wang
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, China
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19
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Huang L, Xu L, Han G, Crickmore N, Song F, Xu J. Characterization of CwlC, an autolysin, and its role in mother cell lysis of Bacillus thuringiensis subsp. israelensis. Lett Appl Microbiol 2021; 74:92-102. [PMID: 34695235 DOI: 10.1111/lam.13590] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Revised: 10/13/2021] [Accepted: 10/15/2021] [Indexed: 11/27/2022]
Abstract
Bacillus thuringiensis subsp. israelensis (Bti) has been proven to efficiently control mosquitoes, of which many species are important vectors of human disease. The larvicidal action is attributed to the parasporal crystals formed in the sporulating cells and released upon cell autolysis. In this study, a sporulation-specific cwlC gene that encodes an N-acetylmuramoyl-L -alanine amidase was characterized in Bti strain Bt-59. CwlC was the only cell wall hydrolase in Bti found to contain both MurNAc-LAA and Amidase02_C domains. A recombinant CwlC-His protein was able to digest the Bacillus cell wall. Deletion of the cwlC gene delayed Bti mother cell lysis without impacting vegetative growth or insecticidal efficacy. Transcriptional analyses indicated that cwlC was expressed at the late sporulation stage and was controlled by SigK. Two other cell wall hydrolase genes, cwlB and cwlE, with high expression levels at T14 in Bt-59, were also identified. Like cwlC, cwlB expression was controlled by SigK; in contrast, cwlE was found not to be under the control of this sigma factor and unlike the other two, its gene was found to be plasmid encoded.
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Affiliation(s)
- L Huang
- Department of Applied Microbiology, Jiangsu Lixiahe District Institute of Agricultural Sciences/National Agricultural Experimental Station for Agricultural Microbiology, Yangzhou, China
| | - L Xu
- Department of Applied Microbiology, Jiangsu Lixiahe District Institute of Agricultural Sciences/National Agricultural Experimental Station for Agricultural Microbiology, Yangzhou, China.,State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - G Han
- Department of Applied Microbiology, Jiangsu Lixiahe District Institute of Agricultural Sciences/National Agricultural Experimental Station for Agricultural Microbiology, Yangzhou, China
| | - N Crickmore
- Department of Biochemistry, School of Biological Sciences, University of Sussex, Brighton, UK
| | - F Song
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - J Xu
- Department of Applied Microbiology, Jiangsu Lixiahe District Institute of Agricultural Sciences/National Agricultural Experimental Station for Agricultural Microbiology, Yangzhou, China
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20
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Liu Z, Zhou Y, Feng WN, Chen MY, Han G, Zou GR, Yang S, He Y, Zou X, Tang J, Zhang L, Cui L, Chen H, Li G, Jiang S, Gao J, Xiao L, Zhang Q, Yi W, Huang C. LBA64 Olanzapine, an alternative to dexamethasone for preventing nausea and vomiting induced by cisplatin-based doublet highly emetogenic chemotherapy: A non-inferiority, prospective, multi-centered, randomized, controlled, phase III clinical trial. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.2145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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21
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Zheng J, Qiao J, S. Zhang, Zhang Y, Bai X, Cao J, Han G. 170P Identification and validation of novel immune genomic subtypes for triple-positive breast cancer. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.451] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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22
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Li Y, Liu FR, Han G, Chen QY, Zhang YZ, Xie XX, Zhang LL, Lian YB. Design of an electric-driven nonvolatile low-energy-consumption phase change optical switch. Nanotechnology 2021; 32:405201. [PMID: 34171853 DOI: 10.1088/1361-6528/ac0ead] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 06/24/2021] [Indexed: 06/13/2023]
Abstract
Traditional optical switches relying on the weak, volatile thermo-optic or electro-optic effects of Si or SiN waveguides show a high consumption and large footprint. In this paper, we reported an electric-driven phase change optical switch consisting of a Si waveguide, Ge2Sb2Te5(GST) thin film and graphene heater suitable for large-scale integration and high-speed switching. The reversible transition between the amorphous and crystalline states was achieved by applying two different voltage pulses of 1.4 V (SET) and 4 V (RESET). The optical performance of the proposed switch showed a high extinction ration of 44-46 dB in a wide spectral range (1525-1575 nm), an effective index variation of Δneff = 0.49 and a mode loss variation of Δα = 15 dBμm-1at the wavelength of 1550 nm. In thermal simulations, thanks to the ultra-high thermal conductivity of graphene, the proposed switch showed that the consumption for the SET process was only 3.528 pJ with a 1.4 V pulse of 5 ns, while a 4 V pulse of 1.5 ns was needed for RESET process with a consumption of 1.05 nJ. Our work is helpful to analyze the thermal-conduction phase transition process of on-chip phase change optical switches, and the design of the low-energy-consumption switch is conducive to the integrated application of photonic chips.
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Affiliation(s)
- Y Li
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - F R Liu
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - G Han
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Q Y Chen
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Y Z Zhang
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - X X Xie
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - L L Zhang
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
| | - Y B Lian
- Key Laboratory of Trans-scale Laser Manufacturing (Beijing University of Technology), Ministry of Education, Beijing 100124, People's Republic of China
- Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124, People's Republic of China
- Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, People's Republic of China
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23
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Li F, Lozier MS, Bacon S, Bower AS, Cunningham SA, de Jong MF, deYoung B, Fraser N, Fried N, Han G, Holliday NP, Holte J, Houpert L, Inall ME, Johns WE, Jones S, Johnson C, Karstensen J, Le Bras IA, Lherminier P, Lin X, Mercier H, Oltmanns M, Pacini A, Petit T, Pickart RS, Rayner D, Straneo F, Thierry V, Visbeck M, Yashayaev I, Zhou C. Subpolar North Atlantic western boundary density anomalies and the Meridional Overturning Circulation. Nat Commun 2021; 12:3002. [PMID: 34031423 PMCID: PMC8144605 DOI: 10.1038/s41467-021-23350-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Accepted: 04/21/2021] [Indexed: 11/29/2022] Open
Abstract
Changes in the Atlantic Meridional Overturning Circulation, which have the potential to drive societally-important climate impacts, have traditionally been linked to the strength of deep water formation in the subpolar North Atlantic. Yet there is neither clear observational evidence nor agreement among models about how changes in deep water formation influence overturning. Here, we use data from a trans-basin mooring array (OSNAP-Overturning in the Subpolar North Atlantic Program) to show that winter convection during 2014-2018 in the interior basin had minimal impact on density changes in the deep western boundary currents in the subpolar basins. Contrary to previous modeling studies, we find no discernable relationship between western boundary changes and subpolar overturning variability over the observational time scales. Our results require a reconsideration of the notion of deep western boundary changes representing overturning characteristics, with implications for constraining the source of overturning variability within and downstream of the subpolar region.
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Affiliation(s)
- F Li
- State Key Laboratory of Marine Environmental Science & College of Ocean and Earth Sciences, Xiamen University, Xiamen, China.
- School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA.
| | - M S Lozier
- School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA.
| | - S Bacon
- National Oceanography Centre, Southampton, UK
| | - A S Bower
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | | | - M F de Jong
- NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands
| | - B deYoung
- Department of Physics and Physical Oceanography, Memorial University, St. John's, NL, Canada
| | - N Fraser
- Scottish Association for Marine Science, Oban, UK
| | - N Fried
- NIOZ Royal Netherlands Institute for Sea Research, Texel, Netherlands
| | - G Han
- Fisheries and Oceans Canada, Institute of Ocean Sciences, Sidney, BC, Canada
- Fisheries and Oceans Canada, Northwest Atlantic Fisheries Centre, St. John's, NL, Canada
| | | | - J Holte
- Scripps Institution of Oceanography, UCSD, La Jolla, CA, USA
| | - L Houpert
- National Oceanography Centre, Southampton, UK
| | - M E Inall
- Scottish Association for Marine Science, Oban, UK
- School of Geosciences, Edinburgh University, Edinburgh, UK
| | - W E Johns
- Department of Ocean Sciences, University of Miami, Miami, FL, USA
| | - S Jones
- Scottish Association for Marine Science, Oban, UK
| | - C Johnson
- Scottish Association for Marine Science, Oban, UK
| | - J Karstensen
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - I A Le Bras
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
- Scripps Institution of Oceanography, UCSD, La Jolla, CA, USA
| | - P Lherminier
- Univ. Brest, Ifremer, CNRS, IRD, Laboratoire d'Océanographie Physique et Spatiale, Plouzané, France
| | - X Lin
- Frontier Science Center for Deep Ocean Multispheres and Earth System and Physical Oceanography Laboratory, Ocean University of China, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China
| | - H Mercier
- CNRS, Laboratoire d'Océanographie Physique et Spatiale, Plouzané, France
| | - M Oltmanns
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - A Pacini
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - T Petit
- School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA
| | - R S Pickart
- Woods Hole Oceanographic Institution, Woods Hole, MA, USA
| | - D Rayner
- National Oceanography Centre, Southampton, UK
| | - F Straneo
- Scripps Institution of Oceanography, UCSD, La Jolla, CA, USA
| | - V Thierry
- Univ. Brest, Ifremer, CNRS, IRD, Laboratoire d'Océanographie Physique et Spatiale, Plouzané, France
| | - M Visbeck
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
| | - I Yashayaev
- Bedford Institute of Oceanography, Dartmouth, NS, Canada
| | - C Zhou
- Frontier Science Center for Deep Ocean Multispheres and Earth System and Physical Oceanography Laboratory, Ocean University of China, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China
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Han G, Chowdhury U, Eriten M, Henak CR. Relaxation capacity of cartilage is a critical factor in rate- and integrity-dependent fracture. Sci Rep 2021; 11:9527. [PMID: 33947908 PMCID: PMC8096812 DOI: 10.1038/s41598-021-88942-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Accepted: 04/15/2021] [Indexed: 11/30/2022] Open
Abstract
Articular cartilage heals poorly but experiences mechanically induced damage across a broad range of loading rates and matrix integrity. Because loading rates and matrix integrity affect cartilage mechanical responses due to poroviscoelastic relaxation mechanisms, their effects on cartilage failure are important for assessing and preventing failure. This paper investigated rate- and integrity-dependent crack nucleation in cartilage from pre- to post-relaxation timescales. Rate-dependent crack nucleation and relaxation responses were obtained as a function of matrix integrity through microindentation. Total work for crack nucleation increased with decreased matrix integrity, and with decreased loading rates. Critical energy release rate of intact cartilage was estimated as 2.39 ± 1.39 to 2.48 ± 1.26 kJ m-2 in a pre-relaxation timescale. These findings showed that crack nucleation is delayed when cartilage can accommodate localized loading through poroviscoelastic relaxation mechanisms before fracture at a given loading rate and integrity state.
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Affiliation(s)
- G Han
- Department of Mechanical Engineering, University of Minnesota, 111 Church St SE, Minneapolis, MN, 55455, USA
| | - U Chowdhury
- Department of Mechanical Engineering, University of Wisconsin-Madison, 1513 University Ave., Madison, WI, 53706, USA
| | - M Eriten
- Department of Mechanical Engineering, University of Wisconsin-Madison, 1513 University Ave., Madison, WI, 53706, USA
| | - C R Henak
- Department of Mechanical Engineering, University of Wisconsin-Madison, 1513 University Ave., Madison, WI, 53706, USA.
- Department of Biomedical Engineering, University of Wisconsin-Madison, 1550 University Ave., Madison, WI, 53706, USA.
- Department of Orthopedics and Rehabilitation, University of Wisconsin-Madison, 1111 Highland Ave., Madison, WI, 53705, USA.
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Han G, Mannaa M, Kim N, Jeon HW, Jung H, Lee HH, Kim J, Park J, Park AR, Kim JC, Seo YS. Response of Pine Rhizosphere Microbiota to Foliar Treatment with Resistance-Inducing Bacteria against Pine Wilt Disease. Microorganisms 2021; 9:microorganisms9040688. [PMID: 33810444 PMCID: PMC8065550 DOI: 10.3390/microorganisms9040688] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Revised: 03/24/2021] [Accepted: 03/24/2021] [Indexed: 11/19/2022] Open
Abstract
In this study, two bacterial strains, IRP7 and IRP8, were selected to induce resistance against pine wilt disease (PWD). Foliar application with these strains to nematode-inoculated pine seedlings significantly reduced PWD severity. The effect of nematode inoculation and bacterial treatment on the rhizosphere bacterial community was investigated. The results indicated that the rhizosphere of nematode-inoculated seedlings contained a lower relative abundance of beneficial microbes such as Paraburkholderia, Bradyrhizobium, Rhizobacter, Lysobacter, and Caballeronia. Bacterial treatment resulted in significant changes in the microbes that were represented in relatively low relative abundance. Treatment with IRP7 resulted in an increase in the relative abundance of Nitrospirillum, Bacillus, and Luteibacter, which might be useful for protection against infection. Treatment with IRP8 resulted in an increase in the relative abundance of obligate bacterial predators of the Bdellovibrio genus that were previously shown to control several bacterial phytopathogens and may have a role in the management of nematode-carried bacteria. The selected bacteria were identified as Pseudomonas koreensis IRP7 and Lysobacter enzymogenes IRP8 and are suggested as a potential treatment for induced resistance against PWD. To our knowledge, this is the first report on the effect of foliar treatment with resistance-inducing bacteria on the rhizosphere microbiota.
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Affiliation(s)
- Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
| | - Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
- Department of Plant Pathology, Cairo University, Giza 12613, Egypt
| | - Namgyu Kim
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
| | - Hee Won Jeon
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
| | - Hyun-Hee Lee
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
| | - Junheon Kim
- Forest Insect Pests and Diseases Division, National Institute of Forest Science, Seoul 02455, Korea;
| | - Jungwook Park
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
- Environmental Microbiology Research Team, Nakdonggang National Institute of Biological Resources (NNIBR), Sangju 37242, Korea
| | - Ae Ran Park
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
| | - Jin-Cheol Kim
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
- Correspondence: (J.-C.K.); (Y.-S.S.)
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (G.H.); (M.M.); (N.K.); (H.J.); (H.-H.L.); (J.P.)
- Correspondence: (J.-C.K.); (Y.-S.S.)
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Lebwohl M, Stein Gold L, Papp K, Han G, Pariser D, Lin T, Harris S, Jacobson A. Long‐term safety and efficacy of a fixed‐combination halobetasol propionate 0.01%/tazarotene 0.045% lotion in moderate‐to‐severe plaque psoriasis: phase 3 open‐label study. J Eur Acad Dermatol Venereol 2021; 35:1152-1160. [DOI: 10.1111/jdv.17113] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Accepted: 12/16/2020] [Indexed: 11/30/2022]
Affiliation(s)
- M.G. Lebwohl
- Icahn School of Medicine at Mount Sinai New York NY USA
| | | | - K. Papp
- Probity Medical Research and K. Papp Clinical Research Waterloo ON Canada
| | - G. Han
- Icahn School of Medicine at Mount Sinai New York NY USA
| | - D.M. Pariser
- Eastern Virginia Medical School and Virginia Clinical Research, Inc. Norfolk VA USA
| | - T. Lin
- Ortho Dermatologics† Bridgewater NJ USA
| | - S. Harris
- Bausch Health US, LLC† Bridgewater NJ USA
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Zhang W, Chen R, Jiang B, Zhao X, Zhao W, Yan SS, Han G, Yu S, Liu G, Kang S. Tunable interfacial Dzyaloshinskii-Moriya interaction in symmetrical Au/[Fe/Au] n multilayers. Nanoscale 2021; 13:2665-2672. [PMID: 33496295 DOI: 10.1039/d0nr06488b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The interfacial Dzyaloshinskii-Moriya interaction (i-DMI) has been exploited in as-made symmetrical Au/[Fe/Au]n structures. By tailoring the chirality of the i-DMI at the Au/Fe interface, an overall enhancement of the i-DMI can be obtained in such a symmetrical structure. Furthermore, the tunability of the i-DMI was realized by changing the stacking number n. Compared to the top of Fe, a large tensile stress at the bottom of Fe due to lattice mismatch was responsible for the chirality change in the sub/Au/Fe system. Layer-resolved DMI calculations revealed that the sign of the spin-orbit coupling (SOC) energy was changed for Au near the interface of Au/Fe under tensile stress, subsequently reversing the chirality of the i-DMI from left-handed to right-handed. Our findings provide a simplest way to tune the i-DMI in a multilayer system, further benefiting the application of skyrmion-based devices.
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Affiliation(s)
- W Zhang
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - R Chen
- Fert Beijing Institute, School of Microelectronics, Beijing Advanced Innovation Center for Big Data and Brain Computing, Beihang University, Beijing 100191, China
| | - B Jiang
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - X Zhao
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - W Zhao
- Fert Beijing Institute, School of Microelectronics, Beijing Advanced Innovation Center for Big Data and Brain Computing, Beihang University, Beijing 100191, China
| | - S S Yan
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - G Han
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - S Yu
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - G Liu
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
| | - S Kang
- School of Physics, State Key Laboratory of Crystal Material, Shandong University, Jinan 250100, China.
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Xue K, Jin Z, Zhang B, Han G, Zhang C. Effects of Recombinant Human Erythropoietin on Inflammatory Factors in Rats with Traumatic Brain Injury. Indian J Pharm Sci 2021. [DOI: 10.36468/pharmaceutical-sciences.803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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29
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Zhang XF, Chen J, Wang PG, Luo SM, Liu NX, Li XM, He XL, Wang Y, Bi XG, Zhang P, Wang Y, Lv ZC, Zhou B, Mai W, Wu H, Hu Y, Wang DR, Luo FW, Xia LG, Lai JJ, Zhang DM, Wang Q, Han G, Wu XW, Ren JA. [Surgical site infection after abdominal surgery in China: a multicenter cross-sectional study]. Zhonghua Wei Chang Wai Ke Za Zhi 2020; 23:1036-1042. [PMID: 33212551 DOI: 10.3760/cma.j.cn.441530-20200810-00470] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: Surgical site infection (SSI) can markedly prolong postoperative hospital stay, aggravate the burden on patients and society, even endanger the life of patients. This study aims to investigate the national incidence of SSI following abdominal surgery and to analyze the related risk factors in order to provide reference for the control and prevention of SSI following abdominal surgery. Methods: A multicenter cross-sectional study was conducted. Clinical data of all the adult patients undergoing abdominal surgery in 68 hospitals across the country from June 1 to 30, 2020 were collected, including demographic characteristics, clinical parameters during the perioperative period, and the results of microbial culture of infected incisions. The primary outcome was the incidence of SSI within postoperative 30 days, and the secondary outcomes were ICU stay, postoperative hospital stay, cost of hospitalization and the mortality within postoperative 30-day. Multivariable logistic regression was used to analyze risk factors of SSI after abdominal surgery. Results: A total of 5560 patients undergoing abdominal surgery were included, and 163 cases (2.9%) developed SSI after surgery, including 98 cases (60.1%) with organ/space infections, 19 cases (11.7%) with deep incisional infections, and 46 cases (28.2%) with superficial incisional infections. The results from microbial culture showed that Escherichia coli was the main pathogen of SSI. Multivariate analysis revealed hypertension (OR=1.792, 95% CI: 1.194-2.687, P=0.005), small intestine as surgical site (OR=6.911, 95% CI: 1.846-25.878, P=0.004), surgical duration (OR=1.002, 95% CI: 1.001-1.003, P<0.001), and surgical incision grade (contaminated incision: OR=3.212, 95% CI: 1.495-6.903, P=0.003; Infection incision: OR=11.562, 95%CI: 3.777-35.391, P<0.001) were risk factors for SSI, while laparoscopic or robotic surgery (OR=0.564, 95%CI: 0.376-0.846, P=0.006) and increased preoperative albumin level (OR=0.920, 95%CI: 0.888-0.952, P<0.001) were protective factors for SSI. In addition, as compared to non-SSI patients, the SSI patients had significantly higher rate of ICU stay [26.4% (43/163) vs. 9.5% (514/5397), χ(2)=54.999, P<0.001] and mortality within postoperative 30-day [1.84% (3/163) vs.0.01% (5/5397), χ(2)=33.642, P<0.001], longer ICU stay (median: 0 vs. 0, U=518 414, P<0.001), postoperative hospital stay (median: 17 days vs. 7 days, U=656 386, P<0.001), and total duration of hospitalization (median: 25 days vs. 12 days, U=648 129, P<0.001), and higher hospitalization costs (median: 71 000 yuan vs. 39 000 yuan, U=557 966, P<0.001). Conclusions: The incidence of SSI after abdominal surgery is 2.9%. In order to reduce the incidence of postoperative SSI, hypoproteinemia should be corrected before surgery, laparoscopic or robotic surgery should be selected when feasible, and the operating time should be minimized. More attentions should be paid and nursing should be strengthened for those patients with hypertension, small bowel surgery and seriously contaminated incision during the perioperative period.
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Affiliation(s)
- X F Zhang
- Research Institute of General Surgery, Jinling Hospital, Nanjing Medical University, Nanjing, Jiangsu 210002, China
| | - J Chen
- Research Institute of General Surgery, Jinling Hospital, Nanjing Medical University, Nanjing, Jiangsu 210002, China
| | - P G Wang
- Department of Emergency Surgery, the Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, China
| | - S M Luo
- Department of Comprehensive Surgery, the People's Hospital of Xinjiang Uygur autonomous region, Urumqi, Xinjiang 830001, China
| | - N X Liu
- Department of Pancreatitis Center, the First Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang 325000, China
| | - X M Li
- Department of General Surgery, Zhengzhou Central Hospital Affiliated to Zhengzhou University, Zhengzhou, Henan 450007, China
| | - X L He
- Department of General Surgery, the Second Affiliated Hospital of the Air Force Medical University, Xi'an, Shanxi 710038, China
| | - Y Wang
- Department of General Surgery, Yichang Central People's Hospital, the First College of Clinical Medical Science of Three Gorges University, Yichang, Hubei 443003, China
| | - X G Bi
- Department of Gastrointestinal and pancreatic Surgery, Shanxi Provincial People's Hospital, Taiyuan, Shanxi 030012, China
| | - P Zhang
- Department of Hepatobiliary Surgery, the First Hospital of Jilin University, Changchun, Jilin 130021, China
| | - Y Wang
- Department of General Surgery, the Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui 230601, China
| | - Z C Lv
- Department of General Surgery, Yantai Yuhuangding Hospital, Yantai, Shandong 264000, China
| | - B Zhou
- Department of General Surgery, the First Affiliated Hospital of Anhui Medical University, Hefei, Anhui 230022, China
| | - W Mai
- Department of Gastrointestinal Surgery, the People's Hospital of Guangxi Zhuang Autonomous Region, Nanning, Guangxi 530021, China
| | - H Wu
- Department of General Surgery, the First Hospital of Shanxi Medical University, Taiyuan, Shanxi 030001, China
| | - Y Hu
- Department of Gastrointestinal Surgery, Sichuan People's Hospital, Chengdu, Sichuan 610072, China
| | - D R Wang
- Department of Gastrointestinal Surgery, Northern Jiangsu People's Hospital, Yangzhou, Jiangsu 225001, China
| | - F W Luo
- Department of Acute Abdominal Surgery, the Second Affiliated Hospital of Dalian Medical University, Dalian, Liaoning 116027, China
| | - L G Xia
- Department of Gastrointestinal Surgery, Shenzhen People's Hospital, Shenzhen, Guangdong 518020, China
| | - J J Lai
- Department of Gastrointestinal Surgery, Yuebei people's hospital, Shaoguan, Guangdong 512026, China
| | - D M Zhang
- Department of General Surgery, Baotou Central Hospital, Baotou, Inner Mongolia 014040, China
| | - Q Wang
- Department of Gastrointestinal Surgery, Affiliated Hospital of Guizhou Medical University, Guiyang, Guizhou 550004, China
| | - G Han
- Department of Gastrointestinal Nutrition and Hernia Surgery, the Second Hospital of Jilin University, Changchun, Jilin 130041, China
| | - X W Wu
- Research Institute of General Surgery, Jinling Hospital, Nanjing Medical University, Nanjing, Jiangsu 210002, China
| | - J A Ren
- Research Institute of General Surgery, Jinling Hospital, Nanjing Medical University, Nanjing, Jiangsu 210002, China
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30
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Li Z, Gao JR, Song L, Wang PG, Ren JA, Wu XW, Luo SM, Zeng QJ, Weng YH, Xu XJ, Yuan QZ, Zhao J, Liao NS, Mai W, Wang F, Cao H, Wang SC, Han G, Wang DR, Wang H, Zhang J, Zhang H, Zhang DM, Liao WS, Zhao WW, Li W, Cui P, Chen X, Zhang HY, Yang T, Wang L, Gao YS, Li J, Wu JJ, Zhou W, Lyu ZJ, Fang J. [Risk factors for surgical site infection after emergency abdominal surgery: a multicenter cross-sectional study in China]. Zhonghua Wei Chang Wai Ke Za Zhi 2020; 23:1043-1050. [PMID: 33212552 DOI: 10.3760/cma.j.issn.441530-20200527-00315] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: Surgical site infection (SSI) is the most common infectious complication after emergency abdominal surgery (EAS). To a large extent, most SSI can be prevented, but there are few relevant studies in China. This study mainly investigated the current situation of SSI occurrence after EAS in China, and further explored risk factors for SSI occurrence. Methods: Multi-center cross-sectional study was conducted. Clinical data of patients undergoing EAS in 33 hospitals across China between May 1, 2019 and June 7, 2019 were prospectively collected, including perioperative data and microbial culture results from infected incisions. The primary outcome was the incidence of SSI after EAS, while the secondary outcomes were postoperative hospital stay, ICU occupancy rate, length of ICU stay, hospitalization cost, and mortality within postoperative 30 days. Univariate and multivariate logistic regression models were used to analyze the risk factors of SSI after EAS. Results: A total of 660 EAS patients aged (47.9±18.3) years were enrolled in this study, including 56.5% of males (373/660). Forty-nine (7.4%) patients developed postoperative SSI. The main pathogen of SSI was Escherichia coli [culture positive rate was 32.7% (16/49)]. As compared to patients without SSI, those with SSI were more likely to be older (median 56 years vs. 46 years, U=19 973.5, P<0.001), male [71.4% (35/49) vs. 56.1% (343/611), χ(2)=4.334, P=0.037] and diabetes [14.3% (7/49) vs. 5.1% (31/611), χ(2)=5.498, P=0.015]; with-lower preoperative hemoglobin (median: 122.0 g/L vs. 143.5 g/L, U=11 471.5, P=0.006) and albumin (median: 35.5 g/L vs. 40.8 g/L, U=9452.0, P<0.001), with higher blood glucose (median: 6.9 mmol/L vs. 6.0 mmol/L, U=17 754.5, P<0.001); with intestinal obstruction [32.7% (16/49) vs. 9.2% (56/611), χ(2)=25.749, P<0.001], with ASA score 3-4 [42.9% (21/49) vs. 13.9% (85/611), χ(2)=25.563, P<0.001] and with high surgical risk [49.0% (24/49) vs. 7.0% (43/611), χ(2)=105.301, P<0.001]. The main operative procedure resulting in SSI was laparotomy [81.6%(40/49) vs. 35.7%(218/611), χ(2)=40.232, P<0.001]. Patients with SSI experienced significantly longer operation time (median: 150 minutes vs. 75 minutes, U=25 183.5, P<0.001). In terms of clinical outcome, higher ICU occupancy rate [51.0% (25/49) vs. 19.5% (119/611), χ(2)=26.461, P<0.001], more hospitalization costs (median: 44 000 yuan vs. 15 000 yuan, U=24 660.0, P<0.001), longer postoperative hospital stay (median: 10 days vs. 5 days, U=23 100.0, P<0.001) and longer ICU occupancy time (median: 0 days vs. 0 days, U=19 541.5, P<0.001) were found in the SSI group. Multivariate logistic regression analysis showed that the elderly (OR=3.253, 95% CI: 1.178-8.985, P=0.023), colorectal surgery (OR=9.156, 95% CI: 3.655-22.937, P<0.001) and longer operation time (OR=15.912, 95% CI:6.858-36.916, P<0.001) were independent risk factors of SSI, while the laparoscopic surgery (OR=0.288, 95% CI: 0.119-0.694, P=0.006) was an independent protective factor for SSI. Conclusions: For patients undergoing EAS, attention should be paid to middle-aged and elderly patients and those of colorectal surgery. Laparoscopic surgery should be adopted when feasible and the operation time should be minimized, so as to reduce the incidence of SSI and to reduce the burden on patients and medical institutions.
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Affiliation(s)
- Z Li
- Department of Emergency Surgery, the Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, China
| | - J R Gao
- Department of Emergency Surgery, the Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, China
| | - L Song
- Department of Emergency Surgery, the Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, China
| | - P G Wang
- Department of Emergency Surgery, the Affiliated Hospital of Qingdao University, Qingdao, Shandong 266000, China
| | - J A Ren
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing, Jiangsu 210002, China
| | - X W Wu
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing, Jiangsu 210002, China
| | - S M Luo
- Department of Gastrointestinal Surgery, the People's Hospital of Xinjiang Uygur Autonomous Region, Urumq, Xinjiang 830001, China
| | - Q J Zeng
- Department of General Surgery, Yueyang First People's Hospital, Yueyang, Hunan 414000, China
| | - Y H Weng
- Department of General Surgery, Shoukang Hospital, Huangshan, Anhui 245000, China
| | - X J Xu
- Department of General Surgery, the First Affiliated Hospital of Xinjiang Medical University, Urumqi, Xinjiang 830001, China
| | - Q Z Yuan
- Department of Hepatobiliary Surgery, Shengli Oilfield Central Hospital, Dongying, Shandong 257000, China
| | - J Zhao
- Department of General Surgery, Shangqiu First People's Hospital, Shangqiu, Henan 476000, China
| | - N S Liao
- Department of General Surgery, Taizhou First People's Hospital, Taizhou, Zhejiang 318000, China
| | - W Mai
- Department of Gastrointestinal Surgery, the People's Hospital of Guangxi Zhuang Autonomous Region, Nanning, Guangxi 530021, China
| | - F Wang
- Department of Gastrointestinal Surgery, the Affiliated Beijing Tsinghua Changgung Hospital, Tsinghua University, Beijing 102218, China
| | - H Cao
- Department of General Surgery, General Hospital of Oriental Hospital Group, Huainan, Anhui 232001, China
| | - S C Wang
- Department of General Surgery, the 901th Hospital of PLA Joint Logistic Support Force, Hefei, Anhui 230031, China
| | - G Han
- Department of Gastrointestinal Surgery, the Second Hospital of Jilin University, Changchun, Jilin 130000, China
| | - D R Wang
- Department of General Surgery, Subei People's Hospital, Yangzhou, Jiangsu 225001, China
| | - H Wang
- Department of General Surgery, Dongying People's Hospital, Dongying, Shandong 257091, China
| | - J Zhang
- Department of General Surgery, FAW General Hospital, Changchun, Jilin 100191, China
| | - H Zhang
- Department of General Surgery, Dongguan Kanghua Hospital, Dongguan, Guangdong 523080, China
| | - D M Zhang
- Department of General Surgery, Baotou Central Hospital, Baotou, Inmer Mongolia 014040, China
| | - W S Liao
- Department of General Surgery, Traditional Chinese Medicine Hospital of Langxi County, Xuancheng, Anhui 242000, China
| | - W W Zhao
- Department of General Surgery, Xishan People's Hospital, Wuxi, Jiangsu 214100, China
| | - W Li
- Department of General Surgery, Xuzhou First People's Hospital, Xuzhou, Jiangsu 221002, China
| | - P Cui
- Department of General Surgery, Heji Hospital Affiliated to Changzhi Medical College, Changzhi, Shanxi 140400, China
| | - X Chen
- Department of General Surgery, the Second Affiliated Hospital of Dalian Medical University, Dalian, Liaoning 116023, China
| | - H Y Zhang
- Department of General Surgery, Nanyang Central Hospital, Nanyang, Henan 476000, China
| | - T Yang
- Department of General Surgery, Tianjin First Central Hospital, Tianjin 300192, China
| | - L Wang
- Department of General Surgery, the 900th Hospital of the PLA, Fuzhou, Fujian 350000, China
| | - Y S Gao
- Department of Gastrointestinal Surgery,the First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450052, China
| | - J Li
- Department of Hepatobiliary Surgery, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan 650032, China
| | - J J Wu
- Department of General Surgery, Liyang People's Hospital, Liyang, Jiangsu 213300, China
| | - W Zhou
- Department of General Surgery, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310020, China
| | - Z J Lyu
- Department of Gastrointestinal Surgery, Guangdong Provincial People's Hospital, Guangzhou, Guangdong 510030, China
| | - J Fang
- Department of General Surgery, the First People's Hospital, Zhangjiagang, Jiangsu 100191, China
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Oh Y, Song SY, Kim HJ, Han G, Hwang J, Kang HY, Oh JI. The Partner Switching System of the SigF Sigma Factor in Mycobacterium smegmatis and Induction of the SigF Regulon Under Respiration-Inhibitory Conditions. Front Microbiol 2020; 11:588487. [PMID: 33304334 PMCID: PMC7693655 DOI: 10.3389/fmicb.2020.588487] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Accepted: 10/22/2020] [Indexed: 12/20/2022] Open
Abstract
The partner switching system (PSS) of the SigF regulatory pathway in Mycobacterium smegmatis has been previously demonstrated to include the anti-sigma factor RsbW (MSMEG_1803) and two anti-sigma factor antagonists RsfA and RsfB. In this study, we further characterized two additional RsbW homologs and revealed the distinct roles of three RsbW homologs [RsbW1 (MSMEG_1803), RsbW2 (MSMEG_6129), and RsbW3 (MSMEG_1787)] in the SigF PSS. RsbW1 and RsbW2 serve as the anti-sigma factor of SigF and the protein kinase phosphorylating RsfB, respectively, while RsbW3 functions as an anti-SigF antagonist through its protein interaction with RsbW1. Using relevant mutant strains, RsfB was demonstrated to be the major anti-SigF antagonist in M. smegmatis. The phosphorylation state of Ser-63 was shown to determine the functionality of RsfB as an anti-SigF antagonist. RsbW2 was demonstrated to be the only protein kinase that phosphorylates RsfB in M. smegmatis. Phosphorylation of Ser-63 inactivates RsfB to render it unable to interact with RsbW1. Our comparative RNA sequencing analysis of the wild-type strain of M. smegmatis and its isogenic Δaa3 mutant strain lacking the aa3 cytochrome c oxidase of the respiratory electron transport chain revealed that expression of the SigF regulon is strongly induced under respiration-inhibitory conditions in an RsfB-dependent way.
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Affiliation(s)
- Yuna Oh
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Su-Yeon Song
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Hye-Jun Kim
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Jihwan Hwang
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Ho-Young Kang
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
| | - Jeong-Il Oh
- Department of Integrated Biological Science, Pusan National University, Busan, South Korea
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Li Y, Liu FR, Han G, Chen QY, Zhao ZP, Xie XX, Huang Y, Yuan YP. Design of low loss 1 × 1 and 1 × 2 phase-change optical switches with different crystalline phases of Ge 2Sb 2Te 5 films. Nanotechnology 2020; 31:455206. [PMID: 32707570 DOI: 10.1088/1361-6528/aba928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
On-chip photonics devices relying on the weak, volatile thermo-optic or electro-optic effects of silicon usually suffer from high insertion loss (IL) and a low refractive index coefficient. In this paper, we designed two novel 1 × 1 and 1 × 2 phase-change optical switches based on a signal-mode Si waveguide integrated with a Ge2Sb2Te5 (GST) top clad layer, respectively. The three-state switch including amorphous GST (a-GST), face centered cubic crystalline phase (FCC-GST) and hexagonal crystalline phase (HCP-GST) operated by utilizing the dramatic difference in the optical constants between the amorphous and two crystalline phases of GST. In the case of the 1 × 1 optical switch, an extinction ratio (ER) of 8.9 dB and an extremely low IL of 0.8 dB were achieved using an optimum GST length of only 2 μm. While for the 1 × 2 optical switch, low ILs in the range of 0.15 ∼ 0.35 dB for both 'cross' (a-GST) and 'bar' (FCC-GST and HCP-GST) states were also obtained. Additionally, we found that both ILs and mode losses of the switch with HCP-GST were about half lower than those with FCC-GST, which means FCC-GST could be instituted by HCP-GST in the traditional ovonic switch with the consideration of low loss. This research provides the fundamental understanding for the realization of low loss and non-volatile Si-GST hybrid optical switches, with potential for future communication networks.
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Affiliation(s)
- Y Li
- Key Laboratory of Trans-scale Laser Manufacturing, (Beijing University of Technology), Ministry of Education, Beijing 100124 People's Republic of China. Beijing Engineering Research Center of Laser Technology, Beijing University of Technology, Beijing 100124 People's Republic of China. Institute of Laser Engineering, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124 People's Republic of China
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Imanishi A, Kawazoe T, Hamada Y, Kumagai T, Tsutsui K, Sakai N, Eto K, Noguchi A, Shimizu T, Takahashi T, Han G, Mishima K, Kanbayashi T, Kondo H. Early detection of Niemann-pick disease type C with cataplexy and orexin levels: continuous observation with and without Miglustat. Orphanet J Rare Dis 2020; 15:269. [PMID: 32993765 PMCID: PMC7523321 DOI: 10.1186/s13023-020-01531-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Accepted: 09/07/2020] [Indexed: 12/30/2022] Open
Abstract
Study objectives Niemann-Pick type C (NPC) is an autosomal recessive and congenital neurological disorder characterized by the accumulation of cholesterol and glycosphingolipids. Symptoms include hepatosplenomegaly, vertical supranuclear saccadic palsy, ataxia, dystonia, and dementia. Some cases frequently display narcolepsy-like symptoms, including cataplexy which was reported in 26% of all NPC patients and was more often recorded among late-infantile onset (50%) and juvenile onset (38%) patients. In this current study, we examined CSF orexin levels in the 10 patients of NPC with and without cataplexy, which supports previous findings. Methods Ten patients with NPC were included in the study (5 males and 5 females). NPC diagnosis was biochemically confirmed in all 10 patients, from which 8 patients with NPC1 gene were identified. We compared CSF orexin levels among NPC, narcoleptic and idiopathic hypersomnia patients. Results Six NPC patients with cataplexy had low or intermediate orexin levels. In 4 cases without cataplexy, their orexin levels were normal. In 5 cases with Miglustat treatment, their symptoms stabilized or improved. For cases without Miglustat treatment, their conditions worsened generally. The CSF orexin levels of NPC patients were significantly higher than those of patients with narcolepsy-cataplexy and lower than those of patients with idiopathic hypersomnia, which was considered as the control group with normal CSF orexin levels. Discussion Our study indicates that orexin level measurements can be an early alert of potential NPC. Low or intermediate orexin levels could further decrease due to reduction in the neuronal function in the orexin system, accelerating the patients’ NPC pathophysiology. However with Miglustat treatment, the orexin levels stabilized or improved, along with other general symptoms. Although the circuitry is unclear, this supports that orexin system is indeed involved in narcolepsy-cataplexy in NPC patients. Conclusion The NPC patients with cataplexy had low or intermediate orexin levels. In the cases without cataplexy, their orexin levels were normal. Our study suggests that orexin measurements can serve as an early alert for potential NPC; furthermore, they could be a marker of therapy monitoring during a treatment.
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Affiliation(s)
- A Imanishi
- Department of Psychiatry, Akita University Graduate School of Medicine, Akita, Japan
| | - T Kawazoe
- Department of Neurology, National Center of Neurology and Psychiatry, Tokyo, Japan
| | - Y Hamada
- Department of Pediatrics, Toyonaka Municipal Hospital, Toyonaka, Japan
| | - T Kumagai
- National Center for Child Health and Development, Tokyo, Japan
| | - K Tsutsui
- Department of Psychiatry, Akita University Graduate School of Medicine, Akita, Japan
| | - N Sakai
- Division of Health Sciences, Osaka University Graduate School of Medicine, Osaka, Japan
| | - K Eto
- Department of Pediatrics, Tokyo Women's Medical University, Tokyo, Japan
| | - A Noguchi
- Department of Pediatrics, Akita University Graduate School of Medicine, Akita, Japan
| | - T Shimizu
- Akita Mental Health and Welfare Center, Akita, Japan
| | - T Takahashi
- Department of Pediatrics, Akita University Graduate School of Medicine, Akita, Japan
| | - G Han
- International Institute for Integrative Sleep Medicine (IIIS), University of Tsukuba, Tsukuba, 305-8575, Japan
| | - K Mishima
- Department of Psychiatry, Akita University Graduate School of Medicine, Akita, Japan.,International Institute for Integrative Sleep Medicine (IIIS), University of Tsukuba, Tsukuba, 305-8575, Japan
| | - T Kanbayashi
- International Institute for Integrative Sleep Medicine (IIIS), University of Tsukuba, Tsukuba, 305-8575, Japan.
| | - H Kondo
- International Institute for Integrative Sleep Medicine (IIIS), University of Tsukuba, Tsukuba, 305-8575, Japan
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Park J, Jeon HW, Jung H, Lee HH, Kim J, Park AR, Kim N, Han G, Kim JC, Seo YS. Comparative Transcriptome Analysis of Pine Trees Treated with Resistance-Inducing Substances against the Nematode Bursaphelenchus xylophilus. Genes (Basel) 2020; 11:genes11091000. [PMID: 32858932 PMCID: PMC7564552 DOI: 10.3390/genes11091000] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Revised: 08/21/2020] [Accepted: 08/24/2020] [Indexed: 01/04/2023] Open
Abstract
The pinewood nematode (PWN) Bursaphelenchus xylophilus causes pine wilt disease, which results in substantial economic and environmental losses across pine forests worldwide. Although systemic acquired resistance (SAR) is effective in controlling PWN, the detailed mechanisms underlying the resistance to PWN are unclear. Here, we treated pine samples with two SAR elicitors, acibenzolar-S-methyl (ASM) and methyl salicylic acid (MeSA) and constructed an in vivo transcriptome of PWN-infected pines under SAR conditions. A total of 252 million clean reads were obtained and mapped onto the reference genome. Compared with untreated pines, 1091 and 1139 genes were differentially upregulated following the ASM and MeSA treatments, respectively. Among these, 650 genes showed co-expression patterns in response to both SAR elicitors. Analysis of these patterns indicated a functional linkage among photorespiration, peroxisome, and glycine metabolism, which may play a protective role against PWN infection-induced oxidative stress. Further, the biosynthesis of flavonoids, known to directly control parasitic nematodes, was commonly upregulated under SAR conditions. The ASM- and MeSA-specific expression patterns revealed functional branches for myricetin and quercetin production in flavonol biosynthesis. This study will enhance the understanding of the dynamic interactions between pine hosts and PWN under SAR conditions.
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Affiliation(s)
- Jungwook Park
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (J.P.); (H.J.); (H.-H.L.); (N.K.); (G.H.)
- Environmental Microbiology Research Team, Nakdonggang National Institute of Biological Resources (NNIBR), Sangju 37242, Korea
| | - Hee Won Jeon
- Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, College of Agriculture and Life Sciences, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (J.P.); (H.J.); (H.-H.L.); (N.K.); (G.H.)
| | - Hyun-Hee Lee
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (J.P.); (H.J.); (H.-H.L.); (N.K.); (G.H.)
| | - Junheon Kim
- Forest Insect Pests and Diseases Division, National Institute of Forest Science, Seoul 02455, Korea;
| | - Ae Ran Park
- Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, College of Agriculture and Life Sciences, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
| | - Namgyu Kim
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (J.P.); (H.J.); (H.-H.L.); (N.K.); (G.H.)
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (J.P.); (H.J.); (H.-H.L.); (N.K.); (G.H.)
| | - Jin-Cheol Kim
- Department of Agricultural Chemistry, Institute of Environmentally Friendly Agriculture, College of Agriculture and Life Sciences, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
- Correspondence: (J.-C.K.); (Y.-S.S.)
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (J.P.); (H.J.); (H.-H.L.); (N.K.); (G.H.)
- Correspondence: (J.-C.K.); (Y.-S.S.)
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Zheng JW, Cai SY, Song HM, Wang YL, Han XF, Wu HL, Han G, Gao ZG. [Clinical value of intact parathyroid hormone levels on the first day after total thyroidectomy on prediction for permanent hypoparathyroidism]. Zhonghua Wai Ke Za Zhi 2020; 58:626-630. [PMID: 32727195 DOI: 10.3760/cma.j.cn112139-20190822-00430] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: To examine the value serum calcium and intact parathyroid hormone (iPTH) levels measured on the first day after total thyroidectomy on prediction for permanent hypoparathyroidism. Methods: Totally 546 patients with thyroid cancer and benign thyroid lesions who underwent total thyroidectomy at Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University from February 2008 to December 2018 were analyzed retrospectively. There were 158 males and 388 females aging (50.9±13.2) years (range: 19.0 to 79.2 years). Serum calcium and iPTH levels were collected before surgery, on the first day and 6 months after surgery. Logistic regression was used to analyze the correlation between each data and the occurrence of permanent hypoparathyroidism after surgery.The area under the receiver operating characteristic curve was used to evaluate the predictive power of iPTH for postoperative occurrence of permanent hypoparathyroidism. Results: Among the 546 cases of total thyroidectomy, 22 cases of permanent hypoparathyroidism occurred, with an incidence of 4.0% (22/546). Multivariate analysis showed that iPTH levels on the first day after total thyroidectomy (OR=2.932, 95%CI: 1.129 to 7.616, P=0.027) and serum calcium levels (OR=2.584, 95%CI: 1.017 to 6.567, P=0.046) were independent prognosis factors for postoperative permanent hypoparathyroidism. When the threshold value of iPTH at 24 hours after total thyroidectomy was 5.51 ng/L, the AUC was 0.956 (95%CI: 0.936 to 0.972, P=0.000), sensitivity was 100%, specificity was 85.1%, positive predictive value was 22%, negative predictive value was 100%. When the threshold value of serum calcium at 24 hours after total thyroidectomy was 1.93 mmol/L, the AUC was 0.733 (95%CI: 0.694 to 0.770, P=0.000), sensitivity was 63.6%, specificity was 78.1%, positive predictive value of 10.8% and negative predictive value of 98.1%. Conclusions: Serum iPTH and calcium levels on the first day after total thyroidectomy were related to the occurrence of permanent hypoparathyroidism postoperatively. The predictive value of iPTH level is higher than that of serum calcium level.
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Affiliation(s)
- J W Zheng
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - S Y Cai
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - H M Song
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - Y L Wang
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - X F Han
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - H L Wu
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - G Han
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
| | - Z G Gao
- Department of General Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China
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Liu L, Li X, Ma Y, Wu C, Han G. Selective Catalytic Hydrosilylation of Ethylene. Preparation of Ethyltrimethoxysilane by H2O Promoted RuCl3 ⋅ 3H2O Catalyst. Kinet Catal 2020. [DOI: 10.1134/s0023158420030167] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Mannaa M, Han G, Jeon HW, Kim J, Kim N, Park AR, Kim JC, Seo YS. Influence of Resistance-Inducing Chemical Elicitors against Pine Wilt Disease on the Rhizosphere Microbiome. Microorganisms 2020; 8:microorganisms8060884. [PMID: 32545246 PMCID: PMC7356868 DOI: 10.3390/microorganisms8060884] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Revised: 06/09/2020] [Accepted: 06/10/2020] [Indexed: 12/24/2022] Open
Abstract
Pine wilt disease (PWD) caused by Bursaphelenchus xylophilus is a major threat to pine forests worldwide. Induction of resistance is a promising and safe management option that should be investigated in relation to its possible influence on the pine tree ecosystem, including the surrounding microbial communities. In this study, two main resistance-inducing chemical elicitors, methyl salicylic acid (MeSA) and acibenzolar-s-methyl (ASM), were tested for their control efficiency against PWD and their influence on the rhizosphere microbial composition. Foliar treatment of pine seedlings with the chemical elicitors resulted in a reduction in PWD severity, with ASM showing better control efficacy, reaching up to 73% compared to the untreated control. Moreover, bacterial community analysis of the rhizosphere revealed significant changes in several microbial taxa that were present at low relative abundance. In particular, ASM treatment resulted in a significant increase in specific microbial taxa, including members of the Rhodanobacter, Devosia, Bradyrhizobium, Acidibacter, Mesorhizobium, and Hyphomicrobium genera, which are known to play ecological and plant growth-promoting roles. Furthermore, chitinolytic bacteria were shown to be reduced in response to treatment with both MeSA and ASM. Altogether, the present findings demonstrate the occurrence of significant alterations in several ecologically important microbial taxa after treatment with resistance-inducing chemicals. As compared to MeSA treatment, ASM treatment was more effective at suppressing PWD and resulted in more beneficial changes in rhizosphere microbial composition.
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Affiliation(s)
- Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.); (N.K.)
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.); (N.K.)
| | - Hee Won Jeon
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
| | - Junheon Kim
- Forest Insect Pests and Diseases Division, National Institute of Forest Science, Seoul 02455, Korea;
| | - Namgyu Kim
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.); (N.K.)
| | - Ae Ran Park
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
| | - Jin-Cheol Kim
- Division of Applied Bioscience and Biotechnology, Chonnam National University, Gwangju 61186, Korea; (H.W.J.); (A.R.P.)
- Correspondence: (J.-C.K.); (Y.-S.S.)
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea; (M.M.); (G.H.); (N.K.)
- Correspondence: (J.-C.K.); (Y.-S.S.)
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Choi Y, Kim N, Mannaa M, Kim H, Park J, Jung H, Han G, Lee HH, Seo YS. Characterization of Type VI Secretion System in Xanthomonas oryzae pv. oryzae and Its Role in Virulence to Rice. Plant Pathol J 2020; 36:289-296. [PMID: 32547344 PMCID: PMC7272854 DOI: 10.5423/ppj.nt.02.2020.0026] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Revised: 04/27/2020] [Accepted: 04/28/2020] [Indexed: 06/11/2023]
Abstract
Type VI secretion system (T6SS) is a contact-dependent secretion system, employed by most gram-negative bacteria for translocating effector proteins to target cells. The present study was conducted to investigate T6SS in Xanthomonas oryzae pv. oryzae (Xoo), which causes bacterial blight in rice, and to unveil its functions. Two T6SS clusters were found in the genome of Xoo PXO99A. The deletion mutants, Δhcp1, Δhcp2, and Δhcp12, targeting the hcp gene in each cluster, and a double-deletion mutant targeting both genes were constructed and tested for growth rate, pathogenicity to rice, and inter-bacterial competition ability. The results indicated that hcp in T6SS-2, but not T6SS-1, was involved in bacterial virulence to rice plants. However, neither T6SS-1 nor T6SS-2 had any effect on the ability to compete with Escherichia coli or other bacterial cells. In conclusion, T6SS gene clusters in Xoo have been characterized, and its role in virulence to rice was confirmed.
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Affiliation(s)
- Yeounju Choi
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Namgyu Kim
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Mohamed Mannaa
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
- Department of Plant Pathology, Cairo University, Giza 12613, Egypt
| | - Hongsup Kim
- Korea Seed & Variety Serv, Seed Testing & Res Ctr, Gimcheon 39660, Korea
| | - Jungwook Park
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Hyejung Jung
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Gil Han
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Hyun-Hee Lee
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
| | - Young-Su Seo
- Department of Integrated Biological Science, Pusan National University, Busan 46241, Korea
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Saletin JM, Koopman-Verhoeff M, Han G, Barker DH, Carskadon MA, Anders TF, Sheinkopf SJ. 1002 Endorsement Of Sleep Problems Indexes Autism Severity In Children And Adolescents: Evidence From A Large Community Sample. Sleep 2020. [DOI: 10.1093/sleep/zsaa056.998] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Introduction
Individuals with autism spectrum disorder (ASD) often experience sleep problems. A reliance on case-control studies rather than dimensional samples limit our ability to understand how sleep problems distinguish diagnosis and severity of ASD. To address this need, we present preliminary findings from a large community sample of individuals with heterogeneous autism phenotypes.
Methods
All participants (≤ 21 years) were selected from the Rhode Island Consortium for Autism Research and Treatment (RI-CART) (final n= 977; 233F; 11.27±4.13 years), a public-private-academic registry of families in Rhode Island affected by ASD-like symptoms. Participants completed the Autism Diagnostic Observation Schedule, 2nd Edition to confirm the presence of diagnosable ASD. Each caretaker also completed dimensional measures of functional impairment: Social Responsiveness Scale, 2nd edition and the Vineland Adaptive Behavior Scale (2nd/3rd editions). Caretakers were asked whether the participant suffered current/past sleep problems: yes/no. All analyses are adjusted for age, sex, race, ethnicity, caregiver education, and scale-version (e.g., 2nd/3rd ed., where applicable).
Results
Endorsement of sleep problems distinguished ASD diagnosis: a confirmed diagnosis of ASD was associated with greater prevalence of sleep problems compared to ASD diagnosis (OR: 1.58; 95% CI: 1.05,2.38; p = .028). Across the sample, endorsement of sleep problems was associated with impairments in adaptive behavior (b = -4.73; 95% CI: -7.47,-2.00045; p = .001) and social responsiveness (b = 6.72; 95% CI: 3.27,10.16; p < .001).
Conclusion
These data from a heterogenous community sample provide evidence for a link of sleep to the phenomenology of ASD. While the search for better diagnostic indicators of ASD continues, we recommend that clinicians consider a brief assessment of sleep behaviors of patients with such neurodevelopmental conditions as autism.
Support
Simons Foundation Autism Research Initiative, Hassenfeld Child Health Innovation Institute at Brown University. K01MH109854 (JMS), NIGMS Advance CTR (JMS). KNAW Ter Meulen Grant (MEKV).
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Affiliation(s)
| | | | - G Han
- Brown University, Providence, RI
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Khan S, Jun L, Nawsherwan, Siddique R, Li Y, Han G, Xue M, Nabi G, Liu J. Association of COVID-19 with pregnancy outcomes in health-care workers and general women. Clin Microbiol Infect 2020; 26:788-790. [PMID: 32278081 PMCID: PMC7141623 DOI: 10.1016/j.cmi.2020.03.034] [Citation(s) in RCA: 78] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Revised: 03/18/2020] [Accepted: 03/27/2020] [Indexed: 12/15/2022]
Affiliation(s)
- S Khan
- Department of Cerebrovascular Diseases, The Second Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
| | - L Jun
- Department of Obstetrics, Renmin Hospital of Wuhan University, Wuhan, China
| | - Nawsherwan
- Department of Nutrition and Food Hygiene, School of Health Sciences, Wuhan University, Wuhan, Hubei, China
| | - R Siddique
- Department of Cerebrovascular Diseases, The Second Affiliated Hospital of Zhengzhou University, Zhengzhou, China
| | - Y Li
- Department of Radiology, Wuhan Health Maternal and Infant Hospital, Wuhan, Hubei Province, China
| | - G Han
- Department of Radiation Oncology, Hubei Cancer Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
| | - M Xue
- Department of Cerebrovascular Diseases, The Second Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
| | - G Nabi
- Key Laboratory of Animal Physiology, Biochemistry and Molecular Biology of Hebei Province, College of Life Sciences, Hebei Normal University, Shijiazhuang, China.
| | - J Liu
- Department of Respiratory Diseases, The Second Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
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Zhai B, Hou C, Xu R, Fang Y, Ma N, Xing C, Wang X, Xiao H, Chen G, Han G, Wang R. Gm6377 suppressed SP 2/0 xenograft tumor by down-regulating Myc transcription. Clin Transl Oncol 2020; 22:1463-1471. [PMID: 31950438 DOI: 10.1007/s12094-019-02280-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Accepted: 12/26/2019] [Indexed: 12/27/2022]
Abstract
PURPOSE Disturbed process of B-cell differentiation into plasmablasts (PBs)/plasma cells (PCs) is involved in multiple myeloma (MM). New strategies will be required to eliminate the MM cell clone for a long-term disease control. Because of its PB-like characteristics, the mus musculus myeloma SP 2/0 cell line was used in this study to search novel targets for PBs/PCs. METHODS/PATIENTS Affymetrix microarrays and RNA-sequencing assays were used to search a novel different molecule (Gm6377) between PBs/PCs and mature B cells. Cell counting kit-8 (CCK8), flow cytometry (FACS), xenograft mouse model, and the luciferase reporter system were used to assess the effect of Gm6377 on SP 2/0 cell proliferation, cell cycle, tumor growth, and Myc promoter activation, respectively. RESULTS We found that B cells expressed a high level of Gm6377 mRNA, whereas Gm6377 mRNA was decreased in PCs. In addition, SP 2/0 cells also expressed low levels of Gm6377 mRNA. Critically, Gm6377 overexpression suppressed SP 2/0 cell proliferation but not cell cycle. Furthermore, Gm6377 overexpression suppressed tumor progression in the SP 2/0 xenograft mouse model. Finally, we found that Gm6377 suppressed SP 2/0 cell proliferation by reducing the activation of the Myc promoter. CONCLUSIONS These results suggest that Gm6377 suppresses myeloma SP 2/0 cell growth by suppressing Myc. Thus, modulation of Gm6377 may be a potential therapeutic way to treat MM.
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Affiliation(s)
- B Zhai
- Laboratory of Brain Disorders, Ministry of Science and Technology, Collaborative Innovation Center for Brain Disorders, Beijing Institute of Brain Disorders, Capital Medical University, No. 10 Xitoutiao, You An Men, Beijing, 100069, China.,Department of Geriatric Hematology, Nanlou Division, Chinese PLA General Hospital, National Clinical Research Center for Geriatric Diseases, Beijing, 100853, China.,Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China
| | - C Hou
- Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China
| | - R Xu
- Laboratory of Brain Disorders, Ministry of Science and Technology, Collaborative Innovation Center for Brain Disorders, Beijing Institute of Brain Disorders, Capital Medical University, No. 10 Xitoutiao, You An Men, Beijing, 100069, China.,Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China
| | - Y Fang
- Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China.,Department of Rheumatology, First Hospital of Jilin University, Changchun, 130021, China
| | - N Ma
- Department of Rheumatology, First Hospital of Jilin University, Changchun, 130021, China
| | - C Xing
- Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China
| | - X Wang
- Staidson (Beijing) Biopharmaceuticals Co., Ltd, Beijing, 100176, China
| | - H Xiao
- State Key Laboratory of Toxicology and Medical Countermeasures, Institute of Pharmacology and Toxicology, Beijing, 100850, China
| | - G Chen
- State Key Laboratory of Toxicology and Medical Countermeasures, Institute of Pharmacology and Toxicology, Beijing, 100850, China
| | - G Han
- Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China.
| | - R Wang
- Laboratory of Brain Disorders, Ministry of Science and Technology, Collaborative Innovation Center for Brain Disorders, Beijing Institute of Brain Disorders, Capital Medical University, No. 10 Xitoutiao, You An Men, Beijing, 100069, China. .,Institute of Military Cognition and Brain Sciences, #27, Taiping Road, P.O. Box 130 (3), Beijing, 100850, China.
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Zheng T, Xie HH, Wu XW, Chi Q, Wang F, Yang ZH, Chen CW, Mai W, Luo SM, Song XF, Yang SM, Zhou W, Liu HY, Xu XJ, Zhou Z, Liu CY, Ding LA, Xie K, Han G, Liu HB, Wang JZ, Wang SC, Wang PG, Wang GF, Gu GS, Ren JA. [Investigation of treatment and analysis of prognostic risk on enterocutaneous fistula in China: a multicenter prospective study]. Zhonghua Wei Chang Wai Ke Za Zhi 2019; 22:1041-1050. [PMID: 31770835 DOI: 10.3760/cma.j.issn.1671-0274.2019.11.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Objective: To investigate the diagnosis and treatment for enterocutaneous fistula (ECF) in China, and to explore the prognostic factors of ECF. Methods: A multi-center cross-sectional study was conducted based on the Registration System of Chinese Gastrointestinal Fistula and Intra-Abdominal Infections to collect the clinical data of ECF patients from 54 medical centers in 22 provinces/municipalities from January 1, 2018 to December 31, 2018. The clinical data included patient gender, age, length of hospital stay, intensive care unit (ICU) admission, underlying diseases, primary diseases, direct causes of ECF, location and type of ECF, complications, treatment and outcomes. All medical records were carefully filled in by the attending physicians, and then re-examined by more than two specialists. The diagnosis of ECF was based on the clinical manifestations, laboratory/imaging findings and intraoperative exploration. Results: A total of 1521 patients with ECF were enrolled, including 1099 males and 422 females, with a median age of 55 years. The top three primary diseases of ECF were malignant tumors in 626 cases (41.2%, including 540 gastrointestinal tumors, accounting for 86.3% of malignant tumors), gastrointestinal ulcers and perforations in 202 cases (13.3%), and trauma in 157 cases (10.3%). The direct causes of ECF were mainly surgical operation in 1194 cases (78.5%), followed by trauma in 156 (10.3%), spontaneous fistula due to Crohn's disease in 92 (6.0%), radiation intestinal injury in 41 (2.7%), severe pancreatitis in 20 (1.3%), endoscopic treatment in 13 (0.9%) and 5 cases (0.3%) of unknown reasons. All the patients were divided into three groups: 1350 cases (88.7%) with simple ECF, 150 (9.9%) with multiple ECF, and 21 (1.4%) with combined internal fistula. Among the patients with simple ECF, 438 cases (28.8%) were jejuno-ileal fistula, 313 (20.6%) colon fistula, 170 (11.2%) rectal fistula, 111 (7.3%) duodenal fistula, 76 (5.0%) ileocecal fistula, 65 (4.3%) ileocolic anastomotic fistula, 55 (3.6%) duodenal stump fistula, 36 (2.4%) gastrointestinal anastomotic fistula, 36 (2.4%) esophagogastric/esophagojejunal anastomotic fistula, 29 (1.9%) gastric fistula and 21 (1.4%) cholangiopancreatiointestinal. Among all the simple ECF patients, 991 were tubular fistula and 359 were labial fistula. A total of 1146 patients finished the treatment, of whom 1061 (92.6%) were healed (586 by surgery and 475 self-healing) and 85 (7.4%) died. A total of 1043 patients (91.0%) received nutritional support therapy, and 77 (6.7%) received fistuloclysis. Infectious source control procedures were applied to 1042 patients, including 711 (62.0%) with active lavage and drainage and 331 (28.9%) with passive drainage. Among them, 841 patients (73.4%) underwent minimally invasive procedures of infectious source control (replacement of drainage tube through sinus tract, puncture drainage, etc.), 201 (17.5%) underwent laparotomy drainage, while 104 (9.1%) did not undergo any drainage measures. A total of 610 patients (53.2%) received definitive operation, 24 patients died within postoperative 30-day with mortality of 3.9% (24/610), 69 (11.3%) developed surgical site infection (SSI), and 24 (3.9%) had a relapse of fistula. The highest cure rate was achieved in ileocecal fistula (100%), followed by rectal fistula (96.2%, 128/133) and duodenal stump fistula (95.7%,44/46). The highest mortality was found in combined internal fistula (3/12) and no death in ileocecal fistula. Univariate prognostic analysis showed that primary diseases as Crohn's disease (χ(2)=6.570, P=0.010) and appendicitis/appendiceal abscess (P=0.012), intestinal fistula combining with internal fistula (χ(2)=5.460, P=0.019), multiple ECF (χ(2)=7.135, P=0.008), esophagogastric / esophagojejunal anastomotic fistula (χ(2)=9.501, P=0.002), ECF at ileocecal junction (P=0.012), non-drainage/passive drainage before the diagnosis of intestinal fistula (χ(2)=9.688, P=0.008), non-drainage/passive drainage after the diagnosis of intestinal fistula (χ(2)=9.711, P=0.008), complicating with multiple organ dysfunction syndrome (MODS) (χ(2)=179.699, P<0.001), sepsis (χ(2)=211.851, P<0.001), hemorrhage (χ(2)=85.300, P<0.001), pulmonary infection (χ(2)=60.096, P<0.001), catheter-associated infection (χ(2)=10.617, P=0.001) and malnutrition (χ(2)=21.199, P<0.001) were associated with mortality. Multivariate prognostic analysis cofirmed that sepsis (OR=7.103, 95%CI:3.694-13.657, P<0.001), complicating with MODS (OR=5.018, 95%CI:2.170-11.604, P<0.001), and hemorrhage (OR=4.703, 95%CI: 2.300-9.618, P<0.001) were independent risk factors of the death for ECF patients. Meanwhile, active lavage and drainage after the definite ECF diagnosis was the protective factor (OR=0.223, 95%CI: 0.067-0.745, P=0.015). Conclusions: The overall mortality of ECF is still high. Surgical operation is the most common cause of ECF. Complications e.g. sepsis, MODS, hemorrhage, and catheter-associated infection, are the main causes of death. Active lavage and drainage is important to improve the prognosis of ECF.
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Affiliation(s)
- T Zheng
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing 210002, China
| | - H H Xie
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing 210002, China
| | - X W Wu
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing 210002, China
| | - Q Chi
- Department of General Surgery, The Second Affiliated Hospital, Harbin Medical University, Harbin 150086, China
| | - F Wang
- Department of Gastrointestinal Surgery, Affiliated Beijing Tsinghua Changgung Hospital, Tsinghua University, Beijing 102218, China
| | - Z H Yang
- Department of General Surgery, The First College of Clinical Medical Science, China Three Gorges University, Hubei Yichang 443000, China
| | - C W Chen
- Department of Gastrointestinal Surgery, Hunan Provincial People's Hospital, Changsha 410005, China
| | - W Mai
- Department of Gastrointestinal Surgery, The People's Hospital of Guangxi Zhuang Autonomous Region, Nanning 530021, China
| | - S M Luo
- Department of Emergency Trauma Surgery, The People's Hospital of Xinjiang Uygur Autonomous Region, Urumqi 830001, China
| | - X F Song
- Department of Gastrointestinal Surgery, Henan Provincial People's Hospital, Medical College of Henan University, Zhengzhou 450003, China
| | - S M Yang
- Department of Gastrointestinal Surgery, The Nankai Hospital, Nankai University, Tianjin 300100, China
| | - W Zhou
- Department of General Surgery, Sir Run Run Shaw Hospital, Medicine of School, Zhejiang University, Hangzhou 310016, China
| | - H Y Liu
- Department of Emergency Surgery, The First Affiliated Hospital, Zhengzhou University, Zhengzhou 450000, China
| | - X J Xu
- Department of Pancreatic Surgery, The First Affiliated Hospital, Xinjiang Medical University, Urumqi 830054, China
| | - Z Zhou
- Department of Gastrointestinal Surgery, The First Affiliated Hospital, Division of Life Sciences And Medicine, University of Science and Technology of China, Hefei 230001, China
| | - C Y Liu
- Department of Gastrointestinal Surgery and Hernia Surgery, Ganzhou People's Hospital of Jiangxi Province, Jiangxi Ganzhou 341000, China
| | - L A Ding
- Department of Gastrointestinal Surgery, Affiliated Hospital, Qingdao University, Shandong Qingdao 266003, China
| | - K Xie
- Department of General Surgery, Chest Hospital of Nanyang City of Henan Province, Henan Nanyang 473000, China
| | - G Han
- Department of Gastrointestinal Surgery, The Second Hospital of Jilin University, Changchun 130041, China
| | - H B Liu
- Department of GeneralSurgery, The 940th Hospital, Joint Logistics Support Force of Chinese PLA, Lanzhou 730050, China
| | - J Z Wang
- Department of Gastrointestinal Surgery, The First Affiliated Hospital, Gannan Medical College, Jiangxi Ganzhou 341000, China
| | - S C Wang
- Department of General Surgery, The 901th Hospital, Joint Logistic Support Force of PLA, Hefei 230031, China
| | - P G Wang
- Department of Emergency Surgery, Affiliated Hospital, Qingdao University, Shandong Qingdao 266003, China
| | - G F Wang
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing 210002, China
| | - G S Gu
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing 210002, China
| | - J A Ren
- Research Institute of General Surgery, East War Zone Hospital of PLA, Nanjing 210002, China
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Peng P, Chen Y, Han G, Meng R, Zhang S, Liao Z, Zhang Y, Gong J, Xiao C, Liu X, Zhang P, Zhang L, Xia S, Chu Q, Chen Y, Zhang L. MA01.09 Concomitant SBRT and EGFR-TKI Versus EGFR-TKI Alone for Oligometastatic NSCLC: A Multicenter, Randomized Phase II Study. J Thorac Oncol 2019. [DOI: 10.1016/j.jtho.2019.08.499] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Sohn C, Yu T, Lee M, Park S, Kim J, Han G, Na W. Medical Nutrition Therapy is associated with Decreased Inflammation in Diabetes Patients: A Randomized Controlled Trial. J Acad Nutr Diet 2019. [DOI: 10.1016/j.jand.2019.06.102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Han G, Yang H, Wang Y, Zhang R, Tashiro K, Bungo T, Furuse M, Chowdhury VS. Effects of in ovofeeding of L-leucine on amino acids metabolism and heat-shock protein-70, and -90 mRNA expression in heat-exposed chicks. Poult Sci 2019; 98:1243-1253. [DOI: 10.3382/ps/pey444] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2018] [Accepted: 08/31/2018] [Indexed: 11/20/2022] Open
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Vollmer Dahlke DJ, Smith ML, Han G, Ory MG, Cohen E. Abstract P6-14-03: Metastatic breast cancer alliance's patient education and access to trials: Perceptions and actions. Cancer Res 2019. [DOI: 10.1158/1538-7445.sabcs18-p6-14-03] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background
Those living with metastatic breast cancer (MBC) have distinct and shifting concerns in regard to education and decision making in considering clinical trials as a treatment option. Clinical trials designs, are becoming increasingly complex, and many patients have concerns for biomarker requirements Aims/Research Questions
· What is the status of MBCA advocacy members' and partners' digital information, education and access to metastatic breast cancer trials?
· What plans do MBCA members/partners have for the next 6-18 months to educate and inform their constituents for the 2018 rollout of BreastCancerTrials.org's (BCT)Metastatic Trial Search (MTS) and Metastatic Trial Talk (MTT) and other trial matching systems?
· What are the top 5 barriers regarding trial enrollment?
· What are best practices for MBC trial education?
Research Methodology and Design
A comprehensive analysis was conducted comprising both secondary and primary research to inform these specific aims. Secondary research was conducted using previous capture of MBCA online digital resources and strengthened to include additional research on MBCA members and partners online resources including pages specifically devoted to clinical trials and metastatic clinical trials.
Mixed methods approaches include:
1) An assessment of MBCA members' and partners' digital media presence regarding MBC trials using a standardized form and rating system, and an analysis of MBCA members 2017 use of MTS using BCT secondary data;
2) Structured, recorded interviews with selected MBCA members/ partners, sharing the results of the assessments and querying them regarding their future plans and perceived barriers; and
3) Mixed methods analyses of the interview recordings using DeDoose to assess and articulate key trends and perceptions.
Statistical Methods
Simple frequency percentages and means were used in the assessment rankings of the MBCA members. DeDoose was used to provide mixed method analyses of the MBCA member and partner interviews. Results
Analysis of the MBCA members and partners websites and digital media showed that, increasingly, both groups use the full variety of digital media to educate their constituents regarding MBC clinical trials. The 13 MBCA advocacy members providing online access to BreastCancerTrials' MTS in 2017 provided 97% of the traffic to the MTS trial matching service. System types accessing the MTS widget were 57.3% desktops, 28.6% mobile devices and 14% tablets. Table 1 shows assessment totals of 5 categories of the 13 MBCA advocacy group members' websites using MTS as compared to the 19 MBCA members not using the widget. Table 2 shows the 2017 usage of BCT's MTS with 97% of the page views coming from MBCA members.
Table 1.Assessment Ratings of MBCA Advocacy Partners on Metastatic Trial Education/AccessAwareness of Trials (e.g. explains trial Phases)Knowledge SharingInterest in Metastatic Breast CancerAction Potential for clinical trial access or enrollmentTotal (0-100)13 MBCA Advocate Members with MTS widget22.1523.0024.3124.1593.6219 MBCA Members without MTS widget13.2113.9513.5311.9552.16
Table 2.2017 Use Of Metastatic Trial SearchBCT's Metastatic Trial Search (MTS) Results2017Annual Page views33,360Unique Sessions14,295Show Trials8,100Show Trials by month675Average Time on Site (minutes)3:34Total Engagement Events5,006
Citation Format: Vollmer Dahlke DJ, Smith ML, Han G, Ory MG, Cohen E. Metastatic breast cancer alliance's patient education and access to trials: Perceptions and actions [abstract]. In: Proceedings of the 2018 San Antonio Breast Cancer Symposium; 2018 Dec 4-8; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2019;79(4 Suppl):Abstract nr P6-14-03.
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Affiliation(s)
- DJ Vollmer Dahlke
- TX A&M University's Center for Population Health and Aging, College Station, TX; University of California at San Francisco, San Francisco, CA
| | - ML Smith
- TX A&M University's Center for Population Health and Aging, College Station, TX; University of California at San Francisco, San Francisco, CA
| | - G Han
- TX A&M University's Center for Population Health and Aging, College Station, TX; University of California at San Francisco, San Francisco, CA
| | - MG Ory
- TX A&M University's Center for Population Health and Aging, College Station, TX; University of California at San Francisco, San Francisco, CA
| | - E Cohen
- TX A&M University's Center for Population Health and Aging, College Station, TX; University of California at San Francisco, San Francisco, CA
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Yang H, Chowdhury V, Bahry M, Tran P, Do P, Han G, Zhang R, Furuse M. 515 Chronic administration of pine bark extract (flavangenol) attenuates heat shock protins mRNA expression in the chicken brain. J Anim Sci 2018. [DOI: 10.1093/jas/sky404.1103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- H Yang
- Kyushu University,Fukuoka, Japan
| | | | - M Bahry
- Kyushu University,Fukuoka, Japan
| | - P Tran
- Kyushu University,Fukuoka, Japan
| | - P Do
- Kyushu University,Fukuoka, Japan
| | - G Han
- Kyushu University,Fukuoka, Japan
| | - R Zhang
- Harvard Medical School,Boston, MA, United States
| | - M Furuse
- Kyushu University,Fukuoka, Japan
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Han G, Kil D, Goo D, Park G, Kim J, Choi H, Kang H. PSIV-3 Late-Breaking: Transcriptomic analysis in the liver of aged brown-egg laying hens with different intensity of eggshell color. J Anim Sci 2018. [DOI: 10.1093/jas/sky404.628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- G Han
- Chung-Ang University,Anseong, South Korea
| | - D Kil
- Chung-Ang University,Anseong, South Korea
| | - D Goo
- Chung-Ang University,Anseong, South Korea
| | - G Park
- Chung-Ang University,Anseong, South Korea
| | - J Kim
- Chung-Ang University,Anseong, South Korea
| | - H Choi
- Chung-Ang University,Anseong, South Korea
| | - H Kang
- Chung-Ang University,Anseong, South Korea
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Yang L, Han G, Song Q, Ruan C, Li L, Shen J, LI G, Zhong R, Bai S. A Comparison of Patient Position Displacements from Catalyst™ System and Cone Beam CT Registrations for Treatment. Int J Radiat Oncol Biol Phys 2018. [DOI: 10.1016/j.ijrobp.2018.07.1533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Kim Y, Kim K, Boerner K, Han G. FUTURE TIME PERSPECTIVE AND MEDIATION OF HEALTH: FINDINGS FROM THE KOREAN BABY BOOMER PANEL STUDY. Innov Aging 2018. [DOI: 10.1093/geroni/igy023.657] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Y Kim
- University of Massachusetts Boston, Boston, Massachusetts, United States
| | - K Kim
- Department of Gerontology, University of Massachusetts Boston, Boston, MA, USA
| | - K Boerner
- Department of Gerontology, University of Massachusetts Boston, Boston, MA, USA
| | - G Han
- Department of Child Development and Family Studies, Seoul National University, Seoul, Korea
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