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Li Y, Li K, Wang S, Wu H, Li P. A spatiotemporal separable graph convolutional network for oddball paradigm classification under different cognitive-load scenarios. EXPERT SYSTEMS WITH APPLICATIONS 2025; 262:125303. [DOI: 10.1016/j.eswa.2024.125303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2025]
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Cao X, Zheng S, Zhang J, Chen W, Du G. A hybrid CNN-Bi-LSTM model with feature fusion for accurate epilepsy seizure detection. BMC Med Inform Decis Mak 2025; 25:6. [PMID: 39762881 PMCID: PMC11706039 DOI: 10.1186/s12911-024-02845-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2024] [Accepted: 12/27/2024] [Indexed: 01/11/2025] Open
Abstract
BACKGROUND The diagnosis and treatment of epilepsy continue to face numerous challenges, highlighting the urgent need for the development of rapid, accurate, and non-invasive methods for seizure detection. In recent years, advancements in the analysis of electroencephalogram (EEG) signals have garnered widespread attention, particularly in the area of seizure recognition. METHODS A novel hybrid deep learning approach that combines feature fusion for efficient seizure detection is proposed in this study. First, the Discrete Wavelet Transform (DWT) is applied to perform a five-level decomposition of the raw EEG signals, from which time-frequency and nonlinear features are extracted from the decomposed sub-bands. To eliminate redundant features, Support Vector Machine-Recursive Feature Elimination (SVM-RFE) is employed to select the most distinctive features for fusion. Finally, seizure states are classified using Convolutional Neural Network-Bidirectional Long Short-Term Memory (CNN-Bi-LSTM). RESULTS The method was rigorously validated on the Bonn and New Delhi datasets. In the binary classification tasks, both the D-E group (Bonn dataset) and the Interictal-Ictal group (New Delhi dataset) achieved 100% accuracy, 100% sensitivity, 100% specificity, 100% precision, and 100% F1-score. In the three-class classification task A-D-E on the Bonn dataset, the model performed excellently, achieving 96.19% accuracy, 95.08% sensitivity, 97.34% specificity, 97.49% precision, and 96.18% F1-score. In addition, the proposed method was further validated on the larger and more clinically relevant CHB-MIT dataset, achieving average metrics of 98.43% accuracy, 97.84% sensitivity, 99.21% specificity, 99.14% precision, and an F1 score of 98.39%. Compared to existing literature, our method outperformed several recent studies in similar classification tasks, underscoring the effectiveness and advancement of the approach presented in this research. CONCLUSION The findings indicate that the proposed method demonstrates a high level of effectiveness in detecting seizures, which is a crucial aspect of managing epilepsy. By improving the accuracy of seizure detection, this method has the potential to significantly enhance the process of diagnosing and treating individuals affected by epilepsy. This advancement could lead to more tailored treatment plans, timely interventions, and ultimately, better quality of life for patients.
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Affiliation(s)
- Xiaoshuai Cao
- The First Affiliated Hospital, and College of Clinical Medicine of Henan University of Science and Technology, Luoyang, China
| | - Shaojie Zheng
- College of Information Engineering, Henan University of Science and Technology, Luoyang, China
| | - Jincan Zhang
- College of Information Engineering, Henan University of Science and Technology, Luoyang, China
| | - Wenna Chen
- The First Affiliated Hospital, and College of Clinical Medicine of Henan University of Science and Technology, Luoyang, China.
| | - Ganqin Du
- The First Affiliated Hospital, and College of Clinical Medicine of Henan University of Science and Technology, Luoyang, China.
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Djemal A, Kallel AY, Ouni C, El Baccouch R, Bouchaala D, Kammoun Feki F, Charfi Triki C, Fakhfakh A, Kanoun O. Fast processing and classification of epileptic seizures based on compressed EEG signals. Comput Biol Med 2025; 184:109346. [PMID: 39546881 DOI: 10.1016/j.compbiomed.2024.109346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 10/24/2024] [Accepted: 10/30/2024] [Indexed: 11/17/2024]
Abstract
The diagnosis of epilepsy based on visual inspection of electroencephalogram (EEG) signals is inherently complex and prone to error, even for physicians, mainly due to the large number of signals involved and the variability between individuals. These same challenges make the development of portable epilepsy diagnostic systems for everyday use difficult. Key obstacles include the immense complexity of signal processing and the inherent ambiguity in accurately classifying disease. For these reasons, we propose in this paper the deployment of compressive sensing to condense EEG signals while preserving relevant information, allowing seizure classification based on systematically selected features of the reconstructed signals. Based on a dataset comprising EEG recordings from 13 epileptic patients with various seizure types, we explore the deployment of the discrete cosine transform (DCT) and random matrix multiplication for compression ratios ranging from 5% to 70%, balancing data reduction with signal fidelity. Following the extraction of relevant features, selection was performed based on mutual information and a correlation matrix to preserve only the most relevant features for analysis. For classification, following a comparison of adequate machine learning models, XGBoost is chosen as it realizes a classification accuracy of 98.78%. The CS method was implemented on an STM32 microcontroller and a Raspberry Pi for reconstruction and classification, to demonstrate feasibility as an embedded system. At 70% compression, significant improvements have been observed: 70% file size reduction, 84% decrease in transmission time (from 2518.532s to 400.392s), and substantial energy savings (e.g., from 11.5±0.707 mWh to 4.5±0.707 mWh for Patient 12). Thereby, the signal quality was maintained with PSNR of 16.15±3.98 and Pearson correlation coefficient of 0.68±0.15. The proposed system highlights the potential for efficient, portable, real-time epilepsy diagnosis systems that achieve precise and fully automated seizure classification.
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Affiliation(s)
- Achraf Djemal
- Professorship Measurement and Sensor Technology, Chemnitz University of Technology, Chemnitz, Germany; Laboratory of Signals, Systems, Artificial Intelligence and Networks, Digital Research Centre of Sfax, National School of Electronics and Telecommunications of Sfax, 3021 Sfax, Tunisia.
| | - Ahmed Yahia Kallel
- Professorship Measurement and Sensor Technology, Chemnitz University of Technology, Chemnitz, Germany
| | - Cherif Ouni
- Professorship Measurement and Sensor Technology, Chemnitz University of Technology, Chemnitz, Germany; Laboratory of Signals, Systems, Artificial Intelligence and Networks, Digital Research Centre of Sfax, National School of Electronics and Telecommunications of Sfax, 3021 Sfax, Tunisia
| | - Rihem El Baccouch
- Professorship Measurement and Sensor Technology, Chemnitz University of Technology, Chemnitz, Germany
| | - Dhouha Bouchaala
- Laboratory of Signals, Systems, Artificial Intelligence and Networks, Digital Research Centre of Sfax, National School of Electronics and Telecommunications of Sfax, 3021 Sfax, Tunisia
| | - Fatma Kammoun Feki
- Child Neurology Department, Hedi Chaker Sfax University Hospital and Research Laboratory LR19ES15, University of Sfax, Sfax, Tunisia
| | - Chahnez Charfi Triki
- Child Neurology Department, Hedi Chaker Sfax University Hospital and Research Laboratory LR19ES15, University of Sfax, Sfax, Tunisia
| | - Ahmed Fakhfakh
- Laboratory of Signals, Systems, Artificial Intelligence and Networks, Digital Research Centre of Sfax, National School of Electronics and Telecommunications of Sfax, 3021 Sfax, Tunisia
| | - Olfa Kanoun
- Professorship Measurement and Sensor Technology, Chemnitz University of Technology, Chemnitz, Germany.
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Buttar AM, Shaheen Z, Gumaei AH, Mosleh MAA, Gupta I, Alzanin SM, Akbar MA. Enhanced neurological anomaly detection in MRI images using deep convolutional neural networks. Front Med (Lausanne) 2024; 11:1504545. [PMID: 39802885 PMCID: PMC11717658 DOI: 10.3389/fmed.2024.1504545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Accepted: 12/09/2024] [Indexed: 01/16/2025] Open
Abstract
Introduction Neurodegenerative diseases, including Parkinson's, Alzheimer's, and epilepsy, pose significant diagnostic and treatment challenges due to their complexity and the gradual degeneration of central nervous system structures. This study introduces a deep learning framework designed to automate neuro-diagnostics, addressing the limitations of current manual interpretation methods, which are often time-consuming and prone to variability. Methods We propose a specialized deep convolutional neural network (DCNN) framework aimed at detecting and classifying neurological anomalies in MRI data. Our approach incorporates key preprocessing techniques, such as reducing noise and normalizing image intensity in MRI scans, alongside an optimized model architecture. The model employs Rectified Linear Unit (ReLU) activation functions, the Adam optimizer, and a random search strategy to fine-tune hyper-parameters like learning rate, batch size, and the number of neurons in fully connected layers. To ensure reliability and broad applicability, cross-fold validation was used. Results and discussion Our DCNN achieved a remarkable classification accuracy of 98.44%, surpassing well-known models such as ResNet-50 and AlexNet when evaluated on a comprehensive MRI dataset. Moreover, performance metrics such as precision, recall, and F1-score were calculated separately, confirming the robustness and efficiency of our model across various evaluation criteria. Statistical analyses, including ANOVA and t-tests, further validated the significance of the performance improvements observed with our proposed method. This model represents an important step toward creating a fully automated system for diagnosing and planning treatment for neurological diseases. The high accuracy of our framework highlights its potential to improve diagnostic workflows by enabling precise detection, tracking disease progression, and supporting personalized treatment strategies. While the results are promising, further research is necessary to assess how the model performs across different clinical scenarios. Future studies could focus on integrating additional data types, such as longitudinal imaging and multimodal techniques, to further enhance diagnostic accuracy and clinical utility. These findings mark a significant advancement in applying deep learning to neuro-diagnostics, with promising implications for improving patient outcomes and clinical practices.
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Affiliation(s)
- Ahmed Mateen Buttar
- Department of Computer Science, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Zubair Shaheen
- Department of Computer Science, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Abdu H. Gumaei
- Department of Computer Science, College of Computer Engineering and Sciences, Prince Sattam bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Mogeeb A. A. Mosleh
- Faculty of Engineering and Information Technology, Taiz University, Taiz, Yemen
- Faculty of Engineering and Computing, University of Science and Technology, Aden, Yemen
| | - Indrajeet Gupta
- School of Computer Science & AI SR University, Warangal, Telangana, India
| | - Samah M. Alzanin
- Department of Computer Science, College of Computer Engineering and Sciences, Prince Sattam bin Abdulaziz University, Al-Kharj, Saudi Arabia
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Belwal P, Singh S. Deep Learning techniques to detect and analysis of multiple sclerosis through MRI: A systematic literature review. Comput Biol Med 2024; 185:109530. [PMID: 39693692 DOI: 10.1016/j.compbiomed.2024.109530] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 10/30/2024] [Accepted: 12/03/2024] [Indexed: 12/20/2024]
Abstract
Deep learning (DL) techniques represent a rapidly advancing field within artificial intelligence, gaining significant prominence in the detection and analysis of various medical conditions through the analysis of medical data. This study presents a systematic literature review (SLR) focused on deep learning methods for the detection and analysis of multiple sclerosis (MS) using magnetic resonance imaging (MRI). The initial search identified 401 articles, which were rigorously screened, a selection of 82 highly relevant studies. These selected studies primarily concentrate on key areas such as multiple sclerosis, deep learning, convolutional neural networks (CNN), lesion segmentation, and classification, reflecting their alignment with the current state of the art. This review comprehensively examines diverse deep-learning approaches for MS detection and analysis, offering a valuable resource for researchers. Additionally, it presents key insights by summarizing these DL techniques for MS detection and analysis using MRI in a structured tabular format.
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Affiliation(s)
- Priyanka Belwal
- Department of Computer Science and Engineering, NIT Uttarakhand, India.
| | - Surendra Singh
- Department of Computer Science and Engineering, NIT Uttarakhand, India.
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Ojanen P, Kertész C, Peltola J. Characteristics of motion signal profiles of tonic-clonic, tonic, hyperkinetic, and motor seizures extracted from nocturnal video recordings. Epileptic Disord 2024; 26:804-813. [PMID: 39283700 DOI: 10.1002/epd2.20284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Accepted: 09/01/2024] [Indexed: 12/18/2024]
Abstract
OBJECTIVE In this study, characteristics of signal profiles formed by motion, oscillation, and sound signals were analyzed to evaluate generalizability and variability in a single patient setting (intra-patient variability) and between patients (inter-patient variability). As a secondary objective, the effect of brivaracetam intervention on signal profiles was explored. METHODS Patient data included 13 hyperkinetic seizures, 65 tonic seizures, 13 tonic-clonic seizures, and 138 motor seizures from 11 patients. All patients underwent an 8-week monitoring, and after a 3-week baseline, brivaracetam was initiated. Motion, oscillation, and sound features extracted from the video were used to form signal profiles. Variance of signals was calculated, and combined median and quartile visualizations were used to visualize the results. Similarly, the effect of intervention was visualized. RESULTS Hyperkinetic motion signals showed a rapid increase in motion and sound signals without oscillations and achieved low intra-patient variance. Tonic component created a recognizable peak in motion signal typical for tonic and tonic-clonic seizures. For tonic seizures, inter-patient variance was low. Motor signal profiles were varying, and they did not form a generalizable signal profile. Visually recognizable changes were observed in the signal profiles of two patients. SIGNIFICANCE Video-based motion signal analysis enabled the extraction of motion features characteristic for different motor seizure types which might be useful in further development of this system. Tonic component formed a recognizable seizure signature in the motion signal. Hyperkinetic and motor seizures may have not only significantly different motion signal amplitude but also overlapping signal profile characteristics which might hamper their automatic differentiation. Motion signals might be useful in the assessment of movement intensity changes to evaluate the treatment effect. Further research is needed to test generalizability and to increase reliability of the results.
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Affiliation(s)
- Petri Ojanen
- Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland
- Neuro Event Labs, Tampere, Finland
| | | | - Jukka Peltola
- Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland
- Neuro Event Labs, Tampere, Finland
- Department of Neurology, Tampere University Hospital, Tampere, Finland
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Herlopian A. Networks through the lens of high-frequency oscillations. FRONTIERS IN NETWORK PHYSIOLOGY 2024; 4:1462672. [PMID: 39679263 PMCID: PMC11638840 DOI: 10.3389/fnetp.2024.1462672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Accepted: 10/22/2024] [Indexed: 12/17/2024]
Abstract
To date, there is no neurophysiologic or neuroimaging biomarker that can accurately delineate the epileptogenic network. High-frequency oscillations (HFO) have been proposed as biomarkers for epileptogenesis and the epileptogenic network. The pathological HFO have been associated with areas of seizure onset and epileptogenic tissue. Several studies have demonstrated that the resection of areas with high rates of pathological HFO is associated with favorable postoperative outcomes. Recent studies have demonstrated the spatiotemporal organization of HFO into networks and their potential role in defining epileptogenic networks. Our review will present the existing literature on HFO-associated networks, specifically focusing on their role in defining epileptogenic networks and their potential significance in surgical planning.
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Affiliation(s)
- Aline Herlopian
- Yale Comprehensive Epilepsy Center, Department of Neurology, Yale School of Medicine, New Haven, CT, United States
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Hu W, Wang J, Li F, Ge D, Wang Y, Jia Q, Yuan S. A Modified Transformer Network for Seizure Detection Using EEG Signals. Int J Neural Syst 2024:2550003. [PMID: 39560448 DOI: 10.1142/s0129065725500030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2024]
Abstract
Seizures have a serious impact on the physical function and daily life of epileptic patients. The automated detection of seizures can assist clinicians in taking preventive measures for patients during the diagnosis process. The combination of deep learning (DL) model with convolutional neural network (CNN) and transformer network can effectively extract both local and global features, resulting in improved seizure detection performance. In this study, an enhanced transformer network named Inresformer is proposed for seizure detection, which is combined with Inception and Residual network extracting different scale features of electroencephalography (EEG) signals to enrich the feature representation. In addition, the improved transformer network replaces the existing Feedforward layers with two half-step Feedforward layers to enhance the nonlinear representation of the model. The proposed architecture utilizes discrete wavelet transform (DWT) to decompose the original EEG signals, and the three sub-bands are selected for signal reconstruction. Then, the Co-MixUp method is adopted to solve the problem of data imbalance, and the processed signals are sent to the Inresformer network for seizure information capture and recognition. Finally, discriminant fusion is performed on the results of three-scale EEG sub-signals to achieve final seizure recognition. The proposed network achieves the best accuracy of 100% on Bonn dataset and the average accuracy of 98.03%, sensitivity of 95.65%, and specificity of 98.57% on the long-term CHB-MIT dataset. Compared to the existing DL networks, the proposed method holds significant potential for clinical research and diagnosis applications with competitive performance.
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Affiliation(s)
- Wenrong Hu
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Juan Wang
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Feng Li
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Daohui Ge
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Yuxia Wang
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Qingwei Jia
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
| | - Shasha Yuan
- School of Computer Science, Qufu Normal University, Rizhao 276826, P. R. China
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Tjepkema-Cloostermans MC, Tannemaat MR, Wieske L, van Rootselaar AF, Stunnenberg BC, Keijzer HM, Koelman JHTM, Tromp SC, Dunca I, van der Star BJ, de Koning ME, van Putten MJAM. Expert level of detection of interictal discharges with a deep neural network. Epilepsia 2024. [PMID: 39530797 DOI: 10.1111/epi.18164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 10/09/2024] [Accepted: 10/09/2024] [Indexed: 11/16/2024]
Abstract
OBJECTIVE Deep learning methods have shown potential in automating the detection of interictal epileptiform discharges (IEDs) in electroencephalography (EEG). We compared IED detection using our previously trained deep neural network with a group of experts to assess its potential applicability. METHODS First, we performed clinical validation on an internal data set. Seven experts reviewed all EEG studies. Performance agreement between experts and the network was compared at both the EEG and IED levels. All EEG recordings were also processed with Persyst. Subsequently, we performed external validation, with data from four centers, using a hybrid approach, where detections by the deep neural network were reviewed by an expert. In case of disagreement with the original report, the EEG recording was annotated independently by five experts. RESULTS For internal validation we included 22 EEG studies with IEDs and 28 EEG studies from controls. At the EEG level, our network showed performance similar to that of the experts. For individual IED detection, the sensitivities between experts ranged from 20.7%-86.4%, whereas the sensitivity of our network was 82.5% (confidence interval [CI]: 77.7%-87.4%) at 99% specificity and a false detection rate (FDR) of <.2/min, outperforming Persyst, with 64.6% sensitivity (CI: 61.4%-67.9%) at 98% specificity. External validation in 174 EEG studies demonstrated that all 85 EEG recordings classified as normal in the original report were classified correctly, with an FDR of .10/min. Of the 89 EEG studies with IEDs according to the report, 56 were correctly classified (Cohen's κ = .62). Visual analysis of the remaining 33 EEG recordings showed high interobserver variability among the five experts (Fleiss' κ = .13). SIGNIFICANCE Our deep neural network detects IEDs on par with clinical experts. The external validation in a hybrid approach showed substantial agreement with the original report. Disagreement was due mainly to high interobserver variability. Our deep neural network may support visual EEG analysis and assist in diagnostics, particularly when human resources are limited.
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Affiliation(s)
- Marleen C Tjepkema-Cloostermans
- Department of Clinical Neurophysiology, Medisch Spectrum Twente, Enschede, The Netherlands
- Department of Clinical Neurophysiology, University of Twente, Enschede, The Netherlands
| | - Martijn R Tannemaat
- Department of Clinical Neurophysiology, Leiden University Medical Center, Leiden, The Netherlands
| | - Luuk Wieske
- Department of Clinical Neurophysiology, Sint Antonius Hospital, Nieuwegein, The Netherlands
| | - Anne-Fleur van Rootselaar
- Department of Clinical Neurophysiology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands
| | - Bas C Stunnenberg
- Department of Neurology and Clinical Neurophysiology, Rijnstate Hospital, Arnhem, The Netherlands
| | - Hanneke M Keijzer
- Department of Neurology and Clinical Neurophysiology, Rijnstate Hospital, Arnhem, The Netherlands
| | - Johannes H T M Koelman
- Department of Clinical Neurophysiology, Amsterdam UMC, University of Amsterdam, Amsterdam Neuroscience, Amsterdam, The Netherlands
| | - Selma C Tromp
- Department of Clinical Neurophysiology, Leiden University Medical Center, Leiden, The Netherlands
| | - Ioana Dunca
- Department of Neurology Centrul Medical Emerald, Bucharest, Romania
| | - Baukje J van der Star
- Department of Clinical Neurophysiology, Medisch Spectrum Twente, Enschede, The Netherlands
| | - Myrthe E de Koning
- Department of Clinical Neurophysiology, Medisch Spectrum Twente, Enschede, The Netherlands
| | - Michel J A M van Putten
- Department of Clinical Neurophysiology, Medisch Spectrum Twente, Enschede, The Netherlands
- Department of Clinical Neurophysiology, University of Twente, Enschede, The Netherlands
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Timothy Aboyeji S, Wang X, Chen Y, Ahmad I, Li L, Liu Z, Yao C, Zhao G, Zhang Y, Li G, Chen S. Automatic detection of epileptic seizure based on one dimensional cascaded convolutional autoencoder with adaptive window-thresholding. J Neural Eng 2024; 21:056040. [PMID: 39419115 DOI: 10.1088/1741-2552/ad883a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 10/17/2024] [Indexed: 10/19/2024]
Abstract
Objective. Identifying the seizure occurrence period (SOP) in extended EEG recordings is crucial for neurologists to diagnose seizures effectively. However, many existing computer-aided diagnosis systems for epileptic seizure detection (ESD) primarily focus on distinguishing between ictal and interictal states in EEG recordings. This focus has limited their application in clinical settings, as these systems typically rely on supervised learning approaches that require labeled data.Approach. To address this, our study introduces an unsupervised learning framework for ESD using a 1D- cascaded convolutional autoencoder (1D-CasCAE). In this approach, EEG recordings from selected patients in the CHB-MIT datasets are first segmented into 5 s epochs. Eight informative channels are chosen based on the correlation coefficient and Shannon entropy. The 1D-CasCAE is designed to autonomously learn the characteristic patterns of interictal (non-seizure) segments through downsampling and upsampling processes. The integration of adaptive thresholding and a moving window significantly enhances the model's robustness, enabling it to accurately identify ictal segments in long EEG recordings.Main results. Experimental results demonstrate that the proposed 1D-CasCAE effectively learns normal EEG signal patterns and efficiently detects anomalies (ictal segments) using reconstruction errors. When compared with other leading methods in anomaly detection, our model exhibits superior performance, as evidenced by its average Gmean, sensitivity, specificity, precision, and false positive rate scores of 98.00% ± 3.51%, 94.94% ± 6.92%, 99.60% ± 0.30%, 79.92% ± 13.56% and 0.0044 ± 0.0030 h-1respectively for a typical patient in CHB-MIT datasets.Significance. The developed model framework can be employed in clinical settings, replacing the manual inspection process of EEG signals by neurologists. Furthermore, the proposed automated system can adapt to each patient's SOP through the use of variable time windows for seizure detection.
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Affiliation(s)
- Sunday Timothy Aboyeji
- CAS Key Laboratory of Human-Machine Intelligence Synergy Systems, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong 518055, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
- Guangdong-Hong Kong-Macao Joint Laboratory of Human-Machine Intelligence-Synergy Systems,Shenzhen, Guangdong 518055, People's Republic of China
| | - Xin Wang
- CAS Key Laboratory of Human-Machine Intelligence Synergy Systems, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong 518055, People's Republic of China
- Guangdong-Hong Kong-Macao Joint Laboratory of Human-Machine Intelligence-Synergy Systems,Shenzhen, Guangdong 518055, People's Republic of China
| | - Yan Chen
- Surgery Division, Epilepsy Center, Shenzhen Children's Hospital,Shenzhen 518036, People's Republic of China
| | - Ijaz Ahmad
- CAS Key Laboratory of Human-Machine Intelligence Synergy Systems, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong 518055, People's Republic of China
- Guangdong-Hong Kong-Macao Joint Laboratory of Human-Machine Intelligence-Synergy Systems,Shenzhen, Guangdong 518055, People's Republic of China
| | - Lin Li
- Surgery Division, Epilepsy Center, Shenzhen Children's Hospital,Shenzhen 518036, People's Republic of China
| | - Zhenzhen Liu
- Surgery Division, Epilepsy Center, Shenzhen Children's Hospital,Shenzhen 518036, People's Republic of China
| | - Chen Yao
- Department of Neurosurgery, The National Key Clinic Specialty, Shenzhen Key Laboratory of Neurosurgery, the First Affiliated Hospital of Shenzhen University, Shenzhen Second People's Hospital, Shenzhen 518035, People's Republic of China
| | - Guoru Zhao
- CAS Key Laboratory of Human-Machine Intelligence Synergy Systems, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong 518055, People's Republic of China
- Guangdong-Hong Kong-Macao Joint Laboratory of Human-Machine Intelligence-Synergy Systems,Shenzhen, Guangdong 518055, People's Republic of China
| | - Yu Zhang
- Translational Medicine Center, Naval Medical University, Shanghai 200433, People's Republic of China
| | - Guanglin Li
- CAS Key Laboratory of Human-Machine Intelligence Synergy Systems, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong 518055, People's Republic of China
- Guangdong-Hong Kong-Macao Joint Laboratory of Human-Machine Intelligence-Synergy Systems,Shenzhen, Guangdong 518055, People's Republic of China
| | - Shixiong Chen
- School of Medicine, The Chinese University of Hong Kong, Shenzhen, 518172 Shenzhen, People's Republic of China
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Shang S, Shi Y, Zhang Y, Liu M, Zhang H, Wang P, Zhuang L. Artificial intelligence for brain disease diagnosis using electroencephalogram signals. J Zhejiang Univ Sci B 2024; 25:914-940. [PMID: 39420525 PMCID: PMC11494159 DOI: 10.1631/jzus.b2400103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Accepted: 08/27/2024] [Indexed: 10/19/2024]
Abstract
Brain signals refer to electrical signals or metabolic changes that occur as a consequence of brain cell activity. Among the various non-invasive measurement methods, electroencephalogram (EEG) stands out as a widely employed technique, providing valuable insights into brain patterns. The deviations observed in EEG reading serve as indicators of abnormal brain activity, which is associated with neurological diseases. Brain‒computer interface (BCI) systems enable the direct extraction and transmission of information from the human brain, facilitating interaction with external devices. Notably, the emergence of artificial intelligence (AI) has had a profound impact on the enhancement of precision and accuracy in BCI technology, thereby broadening the scope of research in this field. AI techniques, encompassing machine learning (ML) and deep learning (DL) models, have demonstrated remarkable success in classifying and predicting various brain diseases. This comprehensive review investigates the application of AI in EEG-based brain disease diagnosis, highlighting advancements in AI algorithms.
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Affiliation(s)
- Shunuo Shang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
- The MOE Frontier Science Center for Brain Science & Brain-Machine Integration, Zhejiang University, Hangzhou 310027, China
| | - Yingqian Shi
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Yajie Zhang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Mengxue Liu
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Hong Zhang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Ping Wang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China.
- The MOE Frontier Science Center for Brain Science & Brain-Machine Integration, Zhejiang University, Hangzhou 310027, China.
- The State Key Lab of Brain-Machine Intelligence, Zhejiang University, Hangzhou 310027, China.
| | - Liujing Zhuang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China.
- The State Key Lab of Brain-Machine Intelligence, Zhejiang University, Hangzhou 310027, China.
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12
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Lu X, Zhang J, Huang S, Wang T, Wang M, Ye M. Nonlinear analysis and recognition of epileptic EEG signals in different stages. J Neurophysiol 2024; 132:685-694. [PMID: 38985939 DOI: 10.1152/jn.00055.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Revised: 07/02/2024] [Accepted: 07/04/2024] [Indexed: 07/12/2024] Open
Abstract
It is a hot problem in epilepsy research to detect and predict seizures by EEG signals. Clinically, it is generally observed that there are only sudden abnormal signals during the ictal stage, but there is no significant difference in the EEG signal between the interictal and preictal stages. To solve the problem that preictal signals are difficult to recognize clinically, and then effectively improve the recognition efficiency of epileptic seizures, so, in this paper, some nonlinear methods are comprehensively used to extract the hidden information in the EEG signals in different stages, namely, phase space reconstruction (PSR), Poincaré section (PS), synchroextracting transform (SET), and machine learning for EEG signal analysis. First, PSR based on C-C method is used, and the results show that there are different diffuse attractor trajectories of the signals in different stages. Second, the confidence ellipse (CE) is constructed by using the scatter diagram of the corresponding trajectory on PS, and the aspect ratio and area of the ellipse are calculated. The results show that there is an interesting transitional phenomenon in preictal stage. To recognize ictal and preictal signals, time-frequency (TF) spectrums, which are processed by SET, are fed into the convolutional neural network (CNN) classifier. The accuracy of recognizing ictal and preictal signals reaches 99.7% and 93.7%, respectively. To summarize, our results based on nonlinear method provide new research ideas for seizure detection and prediction.NEW & NOTEWORTHY Our results based on nonlinear method have better practical significance and clinical application value and improved the prediction efficiency of epileptic EEG signals effectively. This work provides direct insight into the application of these biomarkers for seizure detection and prediction.
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Affiliation(s)
- Xiaojie Lu
- School of Medicine Information, Wan Nan Medical College, Wuhu, China
| | - Jiqian Zhang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - Shoufang Huang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - Tingting Wang
- School of Medicine Information, Wan Nan Medical College, Wuhu, China
| | - Maosheng Wang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - MingQuan Ye
- School of Medicine Information, Wan Nan Medical College, Wuhu, China
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13
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Assim OM, Mahmood AF. A novel universal deep learning approach for accurate detection of epilepsy. Med Eng Phys 2024; 131:104219. [PMID: 39284648 DOI: 10.1016/j.medengphy.2024.104219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 07/26/2024] [Accepted: 07/31/2024] [Indexed: 09/19/2024]
Abstract
Epilepsy claims the lives of many people, so researchers strive to build highly accurate diagnostic models. One of the limitations of obtaining high accuracy is the scarcity of Electroencephalography (EEG) data and the fact that they are from different devices in terms of the channels number and sampling frequency. The paper proposes universal epilepsy diagnoses with high accuracy from electroencephalography signals taken from any device. The novelty of the proposal is to convert VEEG video into images, separating some parts and unifying images taken from different devices. The images were tested by dividing the video into labeled frames of different periods. By adding the spatial attention layer to the deep learning in the new model, classification accuracy increased to 99.95 %, taking five seconds/frame. The proposed has high accuracy in detecting epilepsy from any EEG without being restricted to a specific number of channels or sampling frequencies.
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14
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Bhadra R, Singh PK, Mahmud M. HyEpiSeiD: a hybrid convolutional neural network and gated recurrent unit model for epileptic seizure detection from electroencephalogram signals. Brain Inform 2024; 11:21. [PMID: 39167115 PMCID: PMC11339197 DOI: 10.1186/s40708-024-00234-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Accepted: 07/24/2024] [Indexed: 08/23/2024] Open
Abstract
Epileptic seizure (ES) detection is an active research area, that aims at patient-specific ES detection with high accuracy from electroencephalogram (EEG) signals. The early detection of seizure is crucial for timely medical intervention and prevention of further injuries of the patients. This work proposes a robust deep learning framework called HyEpiSeiD that extracts self-trained features from the pre-processed EEG signals using a hybrid combination of convolutional neural network followed by two gated recurrent unit layers and performs prediction based on those extracted features. The proposed HyEpiSeiD framework is evaluated on two public datasets, the UCI Epilepsy and Mendeley datasets. The proposed HyEpiSeiD model achieved 99.01% and 97.50% classification accuracy, respectively, outperforming most of the state-of-the-art methods in epilepsy detection domain.
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Affiliation(s)
- Rajdeep Bhadra
- Department of Information Technology, Jadavpur University, Jadavpur University Second Campus, Plot No. 8, Salt Lake Bypass, LB Block, Sector III, Salt Lake City, 700 106, Kolkata, West Bengal, India
| | - Pawan Kumar Singh
- Department of Information Technology, Jadavpur University, Jadavpur University Second Campus, Plot No. 8, Salt Lake Bypass, LB Block, Sector III, Salt Lake City, 700 106, Kolkata, West Bengal, India
- Metharath University, 99, Moo 10, Bang Toei, Sam Khok, 12160, Pathum Thani, Thailand
| | - Mufti Mahmud
- Department of Computer Science, Nottingham Trent University, Nottingham, NG11 8NS, UK.
- Medical Technologies Innovation Facility, Nottingham Trent University, Nottingham, NG11 8NS, UK.
- Computing and Informatics Research Centre, Nottingham Trent University, Nottingham, NG11 8NS, UK.
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15
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Schlafly ED, Carbonero D, Chu CJ, Kramer MA. A data augmentation procedure to improve detection of spike ripples in brain voltage recordings. Neurosci Res 2024:S0168-0102(24)00096-8. [PMID: 39102943 DOI: 10.1016/j.neures.2024.07.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 06/04/2024] [Accepted: 07/30/2024] [Indexed: 08/07/2024]
Abstract
Epilepsy is a major neurological disorder characterized by recurrent, spontaneous seizures. For patients with drug-resistant epilepsy, treatments include neurostimulation or surgical removal of the epileptogenic zone (EZ), the brain region responsible for seizure generation. Precise targeting of the EZ requires reliable biomarkers. Spike ripples - high-frequency oscillations that co-occur with large amplitude epileptic discharges - have gained prominence as a candidate biomarker. However, spike ripple detection remains a challenge. The gold-standard approach requires an expert manually visualize and interpret brain voltage recordings, which limits reproducibility and high-throughput analysis. Addressing these limitations requires more objective, efficient, and automated methods for spike ripple detection, including approaches that utilize deep neural networks. Despite advancements, dataset heterogeneity and scarcity severely limit machine learning performance. Our study explores long-short term memory (LSTM) neural network architectures for spike ripple detection, leveraging data augmentation to improve classifier performance. We highlight the potential of combining training on augmented and in vivo data for enhanced spike ripple detection and ultimately improving diagnostic accuracy in epilepsy treatment.
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Affiliation(s)
- Emily D Schlafly
- Department of Mathematics and Statistics, Boston University, Boston, MA, USA.
| | - Daniel Carbonero
- Department of Biomedical Engineering, Boston University, Boston, MA, USA.
| | - Catherine J Chu
- Department of Neurology, Massachusetts General Hospital, Boston, MA, USA; Harvard Medical School, Boston, MA, USA.
| | - Mark A Kramer
- Department of Mathematics and Statistics, Boston University, Boston, MA, USA; Center for Systems Neuroscience, Boston University, Boston, MA, USA.
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16
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Ren G, Kumar A, Mahmoud SS, Fang Q. A deep neural network and transfer learning combined method for cross-task classification of error-related potentials. Front Hum Neurosci 2024; 18:1394107. [PMID: 38933146 PMCID: PMC11199896 DOI: 10.3389/fnhum.2024.1394107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Accepted: 05/22/2024] [Indexed: 06/28/2024] Open
Abstract
Background Error-related potentials (ErrPs) are electrophysiological responses that naturally occur when humans perceive wrongdoing or encounter unexpected events. It offers a distinctive means of comprehending the error-processing mechanisms within the brain. A method for detecting ErrPs with high accuracy holds significant importance for various ErrPs-based applications, such as human-in-the-loop Brain-Computer Interface (BCI) systems. Nevertheless, current methods fail to fulfill the generalization requirements for detecting such ErrPs due to the high non-stationarity of EEG signals across different tasks and the limited availability of ErrPs datasets. Methods This study introduces a deep learning-based model that integrates convolutional layers and transformer encoders for the classification of ErrPs. Subsequently, a model training strategy, grounded in transfer learning, is proposed for the effective training of the model. The datasets utilized in this study are available for download from the publicly accessible databases. Results In cross-task classification, an average accuracy of about 78% was achieved, exceeding the baseline. Furthermore, in the leave-one-subject-out, within-session, and cross-session classification scenarios, the proposed model outperformed the existing techniques with an average accuracy of 71.81, 78.74, and 77.01%, respectively. Conclusions Our approach contributes to mitigating the challenge posed by limited datasets in the ErrPs field, achieving this by reducing the requirement for extensive training data for specific target tasks. This may serve as inspiration for future studies that concentrate on ErrPs and their applications.
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Affiliation(s)
| | | | | | - Qiang Fang
- Department of Biomedical Engineering, Shantou University, Shantou, China
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17
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Liu G, Tian L, Wen Y, Yu W, Zhou W. Cosine convolutional neural network and its application for seizure detection. Neural Netw 2024; 174:106267. [PMID: 38555723 DOI: 10.1016/j.neunet.2024.106267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 02/23/2024] [Accepted: 03/22/2024] [Indexed: 04/02/2024]
Abstract
Traditional convolutional neural networks (CNNs) often suffer from high memory consumption and redundancy in their kernel representations, leading to overfitting problems and limiting their application in real-time, low-power scenarios such as seizure detection systems. In this work, a novel cosine convolutional neural network (CosCNN), which replaces traditional kernels with the robust cosine kernel modulated by only two learnable factors, is presented, and its effectiveness is validated on the tasks of seizure detection. Meanwhile, based on the cosine lookup table and KL-divergence, an effective post-training quantization algorithm is proposed for CosCNN hardware implementation. With quantization, CosCNN can achieve a nearly 75% reduction in the memory cost with almost no accuracy loss. Moreover, we design a configurable cosine convolution accelerator on Field Programmable Gate Array (FPGA) and deploy the quantized CosCNN on Zedboard, proving the proposed seizure detection system can operate in real-time and low-power scenarios. Extensive experiments and comparisons were conducted using two publicly available epileptic EEG databases, the Bonn database and the CHB-MIT database. The results highlight the performance superiority of the CosCNN over traditional CNNs as well as other seizure detection methods.
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Affiliation(s)
- Guoyang Liu
- School of Integrated Circuits, Shandong University, Jinan 250100, China
| | - Lan Tian
- School of Integrated Circuits, Shandong University, Jinan 250100, China
| | - Yiming Wen
- School of Integrated Circuits, Shandong University, Jinan 250100, China
| | - Weize Yu
- School of Integrated Circuits, Shandong University, Jinan 250100, China
| | - Weidong Zhou
- School of Integrated Circuits, Shandong University, Jinan 250100, China.
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18
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Antonoudiou P, Basu T, Maguire J. Semi-automated seizure detection using interpretable machine learning models. RESEARCH SQUARE 2024:rs.3.rs-4361048. [PMID: 38854086 PMCID: PMC11160878 DOI: 10.21203/rs.3.rs-4361048/v1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2024]
Abstract
Despite the vast number of seizure detection publications there are no validated open-source tools for automating seizure detection based on electrographic recordings. Researchers instead rely on manual curation of seizure detection that is highly laborious, inefficient, error prone, and heavily biased. Here we developed an open-source software called SeizyML that uses sensitive machine learning models coupled with manual validation of detected events reducing bias and promoting efficient and accurate detection of electrographic seizures. We compared the validity of four interpretable machine learning models (decision tree, gaussian naïve bayes, passive aggressive classifier, and stochastic gradient descent classifier) on an extensive electrographic seizure dataset that we collected from chronically epileptic mice. We find that the gaussian naïve bayes and stochastic gradient descent models achieved the highest precision and f1 scores, while also detecting all seizures in our mouse dataset and only require a small amount of data to train the model and achieve good performance. Further, we demonstrate the utility of this approach to detect electrographic seizures in a human EEG dataset. This approach has the potential to be a transformative research tool overcoming the analysis bottleneck that slows research progress.
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19
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Brookshire G, Kasper J, Blauch NM, Wu YC, Glatt R, Merrill DA, Gerrol S, Yoder KJ, Quirk C, Lucero C. Data leakage in deep learning studies of translational EEG. Front Neurosci 2024; 18:1373515. [PMID: 38765672 PMCID: PMC11099244 DOI: 10.3389/fnins.2024.1373515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Accepted: 04/04/2024] [Indexed: 05/22/2024] Open
Abstract
A growing number of studies apply deep neural networks (DNNs) to recordings of human electroencephalography (EEG) to identify a range of disorders. In many studies, EEG recordings are split into segments, and each segment is randomly assigned to the training or test set. As a consequence, data from individual subjects appears in both the training and the test set. Could high test-set accuracy reflect data leakage from subject-specific patterns in the data, rather than patterns that identify a disease? We address this question by testing the performance of DNN classifiers using segment-based holdout (in which segments from one subject can appear in both the training and test set), and comparing this to their performance using subject-based holdout (where all segments from one subject appear exclusively in either the training set or the test set). In two datasets (one classifying Alzheimer's disease, and the other classifying epileptic seizures), we find that performance on previously-unseen subjects is strongly overestimated when models are trained using segment-based holdout. Finally, we survey the literature and find that the majority of translational DNN-EEG studies use segment-based holdout. Most published DNN-EEG studies may dramatically overestimate their classification performance on new subjects.
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Affiliation(s)
| | - Jake Kasper
- SPARK Neuro Inc., New York, NY, United States
| | - Nicholas M. Blauch
- SPARK Neuro Inc., New York, NY, United States
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, United States
| | | | - Ryan Glatt
- Pacific Brain Health Center, Pacific Neuroscience Institute and Foundation, Santa Monica, CA, United States
| | - David A. Merrill
- Pacific Brain Health Center, Pacific Neuroscience Institute and Foundation, Santa Monica, CA, United States
- Saint John's Cancer Institute at Providence Saint John's Health Center, Santa Monica, CA, United States
- Psychiatry and Biobehavioral Sciences, Semel Institute for Neuroscience and Human Behavior, David Geffen School of Medicine at University of California, Los Angeles, Los Angeles, CA, United States
| | | | | | - Colin Quirk
- SPARK Neuro Inc., New York, NY, United States
| | - Ché Lucero
- SPARK Neuro Inc., New York, NY, United States
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20
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Liu X, Zhang X, Yu T, Dang R, Li J, Hu B, Wang Q, Luo R. Classification of self-limited epilepsy with centrotemporal spikes by classical machine learning and deep learning based on electroencephalogram data. Brain Res 2024; 1830:148813. [PMID: 38373675 DOI: 10.1016/j.brainres.2024.148813] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 12/25/2023] [Accepted: 02/16/2024] [Indexed: 02/21/2024]
Abstract
Electroencephalogram (EEG) has been widely utilized as a valuable assessment tool for diagnosing epilepsy in hospital settings. However, clinical diagnosis of patients with self-limited epilepsy with centrotemporal spikes (SeLECTS) is challenging due to the presence of similar abnormal discharges in EEG displays compared to other types of epilepsy (non-SeLECTS) patients. To assist the diagnostic process of epilepsy, a comprehensive classification study utilizing machine learning or deep learning techniques is proposed. In this study, clinical EEG was collected from 33 patients diagnosed with either SeLECTS or non-SeLECTS, aged between 3 and 11 years. In the realm of classical machine learning, sharp wave features (including upslope, downslope, and width at half maximum) were extracted from the EEG data. These features were then combined with the random forest (RF) and extreme random forest (ERF) classifiers to differentiate between SeLECTS and non-SeLECTS. Additionally, deep learning was employed by directly inputting the EEG data into a deep residual network (ResNet) for classification. The classification results were evaluated based on accuracy, F1-score, area under the curve (AUC), and area under the precision-recall curve (AUPRC). Following a 10-fold cross-validation, the ERF classifier achieved an accuracy of 73.15 % when utilizing sharp wave feature extraction for classification. The F1-score obtained was 0.72, while the AUC and AUPRC values were 0.75 and 0.63, respectively. On the other hand, the ResNet model achieved a classification accuracy of 90.49 %, with an F1-score of 0.90. The AUC and AUPRC values for ResNet were found to be 0.96 and 0.92, respectively. These results highlighted the significant potential of deep learning methods in SeLECTS classification research, owing to their high accuracy. Moreover, feature extraction-based methods demonstrated good reliability and could assist in identifying relevant biological features of SeLECTS within EEG data.
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Affiliation(s)
- Xi Liu
- Key Laboratory of Spectral Imaging Technology, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China; University of Chinese Academy of Sciences, Beijing, China; Key Laboratory of Biomedical Spectroscopy of Xi'an, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China
| | - Xinming Zhang
- Key Laboratory of Spectral Imaging Technology, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China; University of Chinese Academy of Sciences, Beijing, China; Key Laboratory of Biomedical Spectroscopy of Xi'an, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China
| | - Tao Yu
- Department of Pediatrics, West China Second University Hospital, Sichuan University, Chengdu, China; Key Laboratory of Obstetric & Gynecologic and Pediatric Diseases and Birth Defects of Ministry of Education, Sichuan University, Chengdu, China
| | - Ruochen Dang
- Key Laboratory of Spectral Imaging Technology, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China; University of Chinese Academy of Sciences, Beijing, China; Key Laboratory of Biomedical Spectroscopy of Xi'an, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China
| | - Jian Li
- Chengdu University, Chengdu, China
| | - Bingliang Hu
- Key Laboratory of Spectral Imaging Technology, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China; Key Laboratory of Biomedical Spectroscopy of Xi'an, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China
| | - Quan Wang
- Key Laboratory of Spectral Imaging Technology, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China; Key Laboratory of Biomedical Spectroscopy of Xi'an, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China.
| | - Rong Luo
- Department of Pediatrics, West China Second University Hospital, Sichuan University, Chengdu, China; Key Laboratory of Obstetric & Gynecologic and Pediatric Diseases and Birth Defects of Ministry of Education, Sichuan University, Chengdu, China.
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21
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Hajisafi A, Lin H, Chiang YY, Shahabi C. Dynamic GNNs for Precise Seizure Detection and Classification from EEG Data. ADVANCES IN KNOWLEDGE DISCOVERY AND DATA MINING : ... PACIFIC-ASIA CONFERENCE, PAKDD ..., PROCEEDINGS. PACIFIC-ASIA CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING 2024; 14648:207-220. [PMID: 39507500 PMCID: PMC11535098 DOI: 10.1007/978-981-97-2238-9_16] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2024]
Abstract
Diagnosing epilepsy requires accurate seizure detection and classification, but traditional manual EEG signal analysis is resource-intensive. Meanwhile, automated algorithms often overlook EEG's geometric and semantic properties critical for interpreting brain activity. This paper introduces NeuroGNN, a dynamic Graph Neural Network (GNN) framework that captures the dynamic interplay between the EEG electrode locations and the semantics of their corresponding brain regions. The specific brain region where an electrode is placed critically shapes the nature of captured EEG signals. Each brain region governs distinct cognitive functions, emotions, and sensory processing, influencing both the semantic and spatial relationships within the EEG data. Understanding and modeling these intricate brain relationships are essential for accurate and meaningful insights into brain activity. This is precisely where the proposed NeuroGNN framework excels by dynamically constructing a graph that encapsulates these evolving spatial, temporal, semantic, and taxonomic correlations to improve precision in seizure detection and classification. Our extensive experiments with real-world data demonstrate that NeuroGNN significantly outperforms existing state-of-the-art models.
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Affiliation(s)
| | - Haowen Lin
- University of Southern California, Los Angeles, CA, USA
| | | | - Cyrus Shahabi
- University of Southern California, Los Angeles, CA, USA
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22
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Fussner S, Boyne A, Han A, Nakhleh LA, Haneef Z. Differentiating Epileptic and Psychogenic Non-Epileptic Seizures Using Machine Learning Analysis of EEG Plot Images. SENSORS (BASEL, SWITZERLAND) 2024; 24:2823. [PMID: 38732929 PMCID: PMC11086151 DOI: 10.3390/s24092823] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 04/22/2024] [Accepted: 04/28/2024] [Indexed: 05/13/2024]
Abstract
The treatment of epilepsy, the second most common chronic neurological disorder, is often complicated by the failure of patients to respond to medication. Treatment failure with anti-seizure medications is often due to the presence of non-epileptic seizures. Distinguishing non-epileptic from epileptic seizures requires an expensive and time-consuming analysis of electroencephalograms (EEGs) recorded in an epilepsy monitoring unit. Machine learning algorithms have been used to detect seizures from EEG, typically using EEG waveform analysis. We employed an alternative approach, using a convolutional neural network (CNN) with transfer learning using MobileNetV2 to emulate the real-world visual analysis of EEG images by epileptologists. A total of 5359 EEG waveform plot images from 107 adult subjects across two epilepsy monitoring units in separate medical facilities were divided into epileptic and non-epileptic groups for training and cross-validation of the CNN. The model achieved an accuracy of 86.9% (Area Under the Curve, AUC 0.92) at the site where training data were extracted and an accuracy of 87.3% (AUC 0.94) at the other site whose data were only used for validation. This investigation demonstrates the high accuracy achievable with CNN analysis of EEG plot images and the robustness of this approach across EEG visualization software, laying the groundwork for further subclassification of seizures using similar approaches in a clinical setting.
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Affiliation(s)
- Steven Fussner
- Department of Neurology, Baylor College of Medicine, Houston, TX 77030, USA
| | - Aidan Boyne
- Undergraduate Medical Education, Baylor College of Medicine, Houston, TX 77030, USA
| | - Albert Han
- Undergraduate Medical Education, Baylor College of Medicine, Houston, TX 77030, USA
| | - Lauren A. Nakhleh
- Undergraduate Medical Education, Baylor College of Medicine, Houston, TX 77030, USA
| | - Zulfi Haneef
- Department of Neurology, Baylor College of Medicine, Houston, TX 77030, USA
- Neurology Care Line, Michael E. DeBakey VA Medical Center, Houston, TX 77030, USA
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23
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Huo Q, Luo X, Xu ZC, Yang XY. Machine learning applied to epilepsy: bibliometric and visual analysis from 2004 to 2023. Front Neurol 2024; 15:1374443. [PMID: 38628694 PMCID: PMC11018949 DOI: 10.3389/fneur.2024.1374443] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 03/18/2024] [Indexed: 04/19/2024] Open
Abstract
Background Epilepsy is one of the most common serious chronic neurological disorders, which can have a serious negative impact on individuals, families and society, and even death. With the increasing application of machine learning techniques in medicine in recent years, the integration of machine learning with epilepsy has received close attention, and machine learning has the potential to provide reliable and optimal performance for clinical diagnosis, prediction, and precision medicine in epilepsy through the use of various types of mathematical algorithms, and promises to make better parallel advances. However, no bibliometric assessment has been conducted to evaluate the scientific progress in this area. Therefore, this study aims to visually analyze the trend of the current state of research related to the application of machine learning in epilepsy through bibliometrics and visualization. Methods Relevant articles and reviews were searched for 2004-2023 using Web of Science Core Collection database, and bibliometric analyses and visualizations were performed in VOSviewer, CiteSpace, and Bibliometrix (R-Tool of R-Studio). Results A total of 1,284 papers related to machine learning in epilepsy were retrieved from the Wo SCC database. The number of papers shows an increasing trend year by year. These papers were mainly from 1,957 organizations in 87 countries/regions, with the majority from the United States and China. The journal with the highest number of published papers is EPILEPSIA. Acharya, U. Rajendra (Ngee Ann Polytechnic, Singapore) is the authoritative author in the field and his paper "Deep Convolutional Neural Networks for Automated Detection and Diagnosis of Epileptic Seizures Using EEG Signals" was the most cited. Literature and keyword analysis shows that seizure prediction, epilepsy management and epilepsy neuroimaging are current research hotspots and developments. Conclusions This study is the first to use bibliometric methods to visualize and analyze research in areas related to the application of machine learning in epilepsy, revealing research trends and frontiers in the field. This information will provide a useful reference for epilepsy researchers focusing on machine learning.
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Affiliation(s)
- Qing Huo
- School of Nursing, Zunyi Medical University, Zunyi, China
| | - Xu Luo
- School of Medical Information Engineering, Zunyi Medical University, Zunyi, China
| | - Zu-Cai Xu
- Department of Neurology, The Affiliated Hospital of Zunyi Medical University, Zunyi, China
| | - Xiao-Yan Yang
- Department of Neurology, The Affiliated Hospital of Zunyi Medical University, Zunyi, China
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24
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Ntolkeras G, Makaram N, Bernabei M, De La Vega AC, Bolton J, Madsen JR, Stone SSD, Pearl PL, Papadelis C, Grant EP, Tamilia E. Interictal EEG source connectivity to localize the epileptogenic zone in patients with drug-resistant epilepsy: A machine learning approach. Epilepsia 2024; 65:944-960. [PMID: 38318986 PMCID: PMC11018464 DOI: 10.1111/epi.17898] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 01/15/2024] [Accepted: 01/16/2024] [Indexed: 02/07/2024]
Abstract
OBJECTIVE To deconstruct the epileptogenic networks of patients with drug-resistant epilepsy (DRE) using source functional connectivity (FC) analysis; unveil the FC biomarkers of the epileptogenic zone (EZ); and develop machine learning (ML) models to estimate the EZ using brief interictal electroencephalography (EEG) data. METHODS We analyzed scalp EEG from 50 patients with DRE who had surgery. We reconstructed the activity (electrical source imaging [ESI]) of virtual sensors (VSs) across the whole cortex and computed FC separately for epileptiform and non-epileptiform EEG epochs (with or without spikes). In patients with good outcome (Engel 1a), four cortical regions were defined: EZ (resection) and three non-epileptogenic zones (NEZs) in the same and opposite hemispheres. Region-specific FC features in six frequency bands and three spatial ranges (long, short, inner) were compared between regions (Wilcoxon sign-rank). We developed ML classifiers to identify the VSs in the EZ using VS-specific FC features. Cross-validation was performed using good outcome data. Performance was compared with poor outcomes and interictal spike localization. RESULTS FC differed between EZ and NEZs (p < .05) during non-epileptiform and epileptiform epochs, showing higher FC in the EZ than its homotopic contralateral NEZ. During epileptiform epochs, the NEZ in the epileptogenic hemisphere showed higher FC than its contralateral NEZ. In good outcome patients, the ML classifiers reached 75% accuracy to the resection (91% sensitivity; 74% specificity; distance from EZ: 38 mm) using epileptiform epochs (gamma and beta frequency bands) and 62% accuracy using broadband non-epileptiform epochs, both outperforming spike localization (accuracy = 47%; p < .05; distance from EZ: 57 mm). Lower performance was seen in poor outcomes. SIGNIFICANCE We present an FC approach to extract EZ biomarkers from brief EEG data. Increased FC in various frequencies characterized the EZ during epileptiform and non-epileptiform epochs. FC-based ML models identified the resection better in good than poor outcome patients, demonstrating their potential for presurgical use in pediatric DRE.
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Affiliation(s)
- Georgios Ntolkeras
- Fetal-Neonatal Neuroimaging and Developmental Science Center, Division of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Navaneethakrishna Makaram
- Fetal-Neonatal Neuroimaging and Developmental Science Center, Division of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Matteo Bernabei
- Fetal-Neonatal Neuroimaging and Developmental Science Center, Division of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Aime Cristina De La Vega
- Fetal-Neonatal Neuroimaging and Developmental Science Center, Division of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Jeffrey Bolton
- Division of Epilepsy and Clinical Neurophysiology, Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Joseph R Madsen
- Division of Epilepsy Surgery, Department of Neurosurgery, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Scellig S D Stone
- Division of Epilepsy Surgery, Department of Neurosurgery, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Phillip L Pearl
- Division of Epilepsy and Clinical Neurophysiology, Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Christos Papadelis
- Jane and John Justin Institute for Mind Health, Cook Children's Health Care System, Fort Worth, Texas, USA
| | - Ellen P Grant
- Fetal-Neonatal Neuroimaging and Developmental Science Center, Division of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Division of Neuroradiology, Department of Radiology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Eleonora Tamilia
- Fetal-Neonatal Neuroimaging and Developmental Science Center, Division of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Division of Epilepsy and Clinical Neurophysiology, Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA
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Mallick S, Baths V. Novel deep learning framework for detection of epileptic seizures using EEG signals. Front Comput Neurosci 2024; 18:1340251. [PMID: 38590939 PMCID: PMC11000706 DOI: 10.3389/fncom.2024.1340251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Accepted: 03/04/2024] [Indexed: 04/10/2024] Open
Abstract
Introduction Epilepsy is a chronic neurological disorder characterized by abnormal electrical activity in the brain, often leading to recurrent seizures. With 50 million people worldwide affected by epilepsy, there is a pressing need for efficient and accurate methods to detect and diagnose seizures. Electroencephalogram (EEG) signals have emerged as a valuable tool in detecting epilepsy and other neurological disorders. Traditionally, the process of analyzing EEG signals for seizure detection has relied on manual inspection by experts, which is time-consuming, labor-intensive, and susceptible to human error. To address these limitations, researchers have turned to machine learning and deep learning techniques to automate the seizure detection process. Methods In this work, we propose a novel method for epileptic seizure detection, leveraging the power of 1-D Convolutional layers in combination with Bidirectional Long Short-Term Memory (LSTM) and Gated Recurrent Unit (GRU) and Average pooling Layer as a single unit. This unit is repeatedly used in the proposed model to extract the features. The features are then passed to the Dense layers to predict the class of the EEG waveform. The performance of the proposed model is verified on the Bonn dataset. To assess the robustness and generalizability of our proposed architecture, we employ five-fold cross-validation. By dividing the dataset into five subsets and iteratively training and testing the model on different combinations of these subsets, we obtain robust performance measures, including accuracy, sensitivity, and specificity. Results Our proposed model achieves an accuracy of 99-100% for binary classifications into seizure and normal waveforms, 97.2%-99.2% accuracy for classifications into normal-interictal-seizure waveforms, 96.2%-98.4% accuracy for four class classification and accuracy of 95.81%-98% for five class classification. Discussion Our proposed models have achieved significant improvements in the performance metrics for the binary classifications and multiclass classifications. We demonstrate the effectiveness of the proposed architecture in accurately detecting epileptic seizures from EEG signals by using EEG signals of varying lengths. The results indicate its potential as a reliable and efficient tool for automated seizure detection, paving the way for improved diagnosis and management of epilepsy.
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Affiliation(s)
- Sayani Mallick
- Cognitive Neuroscience Laboratory, Department of Electrical and Electronics Engineering, BITS Pilani, KK Birla Goa Campus, Pilani, Goa, India
| | - Veeky Baths
- Cognitive Neuroscience Laboratory, Department of Biological Sciences, BITS Pilani, KK Birla Goa Campus, Pilani, Goa, India
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Liao J, Wang J, Zhan CA, Yang F. Parameterized aperiodic and periodic components of single-channel EEG enables reliable seizure detection. Phys Eng Sci Med 2024; 47:31-47. [PMID: 37747646 DOI: 10.1007/s13246-023-01340-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Accepted: 09/14/2023] [Indexed: 09/26/2023]
Abstract
Although it is clinically important, a reliable and economical solution to automatic seizure detection for patients at home is yet to be developed. Traditional algorithms rely on multi-channel EEG signals and features of canonical EEG power description. This study is aimed to propose an effective single-channel EEG seizure detection method centered on novel EEG power parameterization and channel selection algorithms. We employed the publicly available multi-channel CHB-MIT Scalp EEG database to gauge the effectiveness of our approach. We first adapted a power spectra parameterization algorithm to characterize the aperiodic and periodic components of the ictal and inter-ictal EEGs. We selected four features based on their statistical significance and interpretability, and developed a ranking approach to channel selection for each patient. We then tested the effectiveness of our approaches to channel and feature selection for automatic seizure detection using support vector machine (SVM) as the classifier. The performance of our algorithm was evaluated using five-fold cross-validation and compared to those methods of comparable complexity (using one or two channels of EEG), in terms of accuracy, specificity, sensitivity, precision and F1 score. Some channels of EEG signals show strikingly different distributions of PSD features between the ictal and inter-ictal states. Four features including the offset and exponent parameters for the aperiodic component and the first and second highest total power (TPW1 and TPW2) form the basis of channel selection and the input of SVM classifier. The selected channel is found to be patient-specific. Our approach has achieved a mean sensitivity of 95.6%, specificity of 99.2%, accuracy of 98.6%, precision of 95.5%, and F1 score of 95.5%. Compared with algorithms in previous studies that used one or two channels of EEG signals, ours outperforms in specificity and accuracy with comparable sensitivity. EEG power spectra parameterization to feature extraction and feature ranking-based channel selection are found to enable efficient and effective automatic seizure detection based on single-channel EEG signal.
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Affiliation(s)
- Jiahui Liao
- School of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, China
- Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China
| | - Jun Wang
- Department of Neurosurgery, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China
| | - Chang'an A Zhan
- School of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, China.
- Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China.
- Department of Rehabilitation Medicine, Zhujiang Hospital, Southern Medical University, Guangzhou, 510280, China.
| | - Feng Yang
- School of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, China.
- Guangdong Provincial Key Laboratory of Medical Image Processing, Southern Medical University, Guangzhou, China.
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Holguin-Garcia SA, Guevara-Navarro E, Daza-Chica AE, Patiño-Claro MA, Arteaga-Arteaga HB, Ruz GA, Tabares-Soto R, Bravo-Ortiz MA. A comparative study of CNN-capsule-net, CNN-transformer encoder, and Traditional machine learning algorithms to classify epileptic seizure. BMC Med Inform Decis Mak 2024; 24:60. [PMID: 38429718 PMCID: PMC10908140 DOI: 10.1186/s12911-024-02460-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Accepted: 02/13/2024] [Indexed: 03/03/2024] Open
Abstract
INTRODUCTION Epilepsy is a disease characterized by an excessive discharge in neurons generally provoked without any external stimulus, known as convulsions. About 2 million people are diagnosed each year in the world. This process is carried out by a neurological doctor using an electroencephalogram (EEG), which is lengthy. METHOD To optimize these processes and make them more efficient, we have resorted to innovative artificial intelligence methods essential in classifying EEG signals. For this, comparing traditional models, such as machine learning or deep learning, with cutting-edge models, in this case, using Capsule-Net architectures and Transformer Encoder, has a crucial role in finding the most accurate model and helping the doctor to have a faster diagnosis. RESULT In this paper, a comparison was made between different models for binary and multiclass classification of the epileptic seizure detection database, achieving a binary accuracy of 99.92% with the Capsule-Net model and a multiclass accuracy with the Transformer Encoder model of 87.30%. CONCLUSION Artificial intelligence is essential in diagnosing pathology. The comparison between models is helpful as it helps to discard those that are not efficient. State-of-the-art models overshadow conventional models, but data processing also plays an essential role in evaluating the higher accuracy of the models.
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Affiliation(s)
| | - Ernesto Guevara-Navarro
- Departamento de Electrónica y Automatización, Universidad Autónoma de Manizales, Manizales, 170001, Caldas, Colombia
| | - Alvaro Eduardo Daza-Chica
- Departamento de Electrónica y Automatización, Universidad Autónoma de Manizales, Manizales, 170001, Caldas, Colombia
| | - Maria Alejandra Patiño-Claro
- Departamento de Electrónica y Automatización, Universidad Autónoma de Manizales, Manizales, 170001, Caldas, Colombia
| | - Harold Brayan Arteaga-Arteaga
- Departamento de Electrónica y Automatización, Universidad Autónoma de Manizales, Manizales, 170001, Caldas, Colombia
| | - Gonzalo A Ruz
- Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez, Santiago, 7941169, Chile
- Center of Applied Ecology and Sustainability (CAPES), Santiago, 8331150, Chile
- Data Observatory Foundation, Santiago, 7510277, Chile
| | - Reinel Tabares-Soto
- Departamento de Electrónica y Automatización, Universidad Autónoma de Manizales, Manizales, 170001, Caldas, Colombia
- Departamento de Sistemas e Informática, Universidad de Caldas, Manizales, 170004, Caldas, Colombia
- Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez, Santiago, 7941169, Chile
| | - Mario Alejandro Bravo-Ortiz
- Departamento de Electrónica y Automatización, Universidad Autónoma de Manizales, Manizales, 170001, Caldas, Colombia.
- Centro de Bioinformática y Biología Computacional (BIOS), Manizales, 170001, Colombia.
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Rehman M, Higdon LM, Sperling MR. Long-Term Home EEG Recording: Wearable and Implantable Devices. J Clin Neurophysiol 2024; 41:200-206. [PMID: 38436387 DOI: 10.1097/wnp.0000000000001014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/05/2024] Open
Abstract
SUMMARY Electroencephalography (EEG) monitoring has served as a cornerstone in the diagnostic and therapeutic evaluation of epilepsy since its development. This has been accomplished with short-term inpatient video-EEG hospitalization enabling observation of both the semiological and the electrographic features of seizures or with short-term home ambulatory EEG or video-EEG. The advantages of inpatient video-EEG monitoring are limited by high cost, inconvenience, and inability to monitor patients for long periods (weeks or months) as might be done in the outpatient setting. This limitation has impelled the development of wearable EEG devices, which aim to capture high-quality long-term EEG data in a user-friendly and unobtrusive manner. This review article aims to summarize three broad categories of wearable EEG devices, including scalp, subcutaneous, and intracranial EEG. In this review, we will discuss the features of each type of device and the implications for the management of epilepsy. This review does not aim to describe every wearable EEG device on the market but instead seeks to provide a broad overview of the various categories of device that are available, giving examples of each and those in development (with no intention to recommend or advocate for any particular product).
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Affiliation(s)
- Mahnoor Rehman
- Department of Neurology, Jefferson Comprehensive Epilepsy Center, Thomas Jefferson University, Philadelphia, Pennsylvania
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Maginga TJ, Masabo E, Bakunzibake P, Kim KS, Nsenga J. Using wavelet transform and hybrid CNN - LSTM models on VOC & ultrasound IoT sensor data for non-visual maize disease detection. Heliyon 2024; 10:e26647. [PMID: 38420424 PMCID: PMC10901083 DOI: 10.1016/j.heliyon.2024.e26647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 02/16/2024] [Accepted: 02/16/2024] [Indexed: 03/02/2024] Open
Abstract
Early detection of plant diseases is crucial for safeguarding crop yield, especially in regions vulnerable to food insecurity, such as Sub-Saharan Africa. One of the significant contributors to maize crop yield loss is the Northern Leaf Blight (NLB), which traditionally takes 14-21 days to visually manifest on maize. This study introduces a novel approach for detecting NLB as early as 4-5 days using Internet of Things (IoT) sensors, which can identify the disease before any visual symptoms appear. Utilizing Convolutional Neural Networks (CNN) and Long Short Term Memory (LSTM) models, nonvisual measurements of Total Volatile Organic Compounds (VOCs) and ultrasound emissions from maize plants were captured and analyzed. A controlled experiment was conducted on four maize varieties, and the data obtained were used to develop and validate a hybrid CNN-LSTM model for VOC classification and an LSTM model for ultrasound anomaly detection. The hybrid CNN-LSTM model, enhanced with wavelet data preprocessing, achieved an F1 score of 0.96 and an Area under the ROC Curve (AUC) of 1.00. In contrast, the LSTM model exhibited an impressive 99.98% accuracy in identifying anomalies in ultrasound emissions. Our findings underscore the potential of IoT sensors in early disease detection, paving the way for innovative disease prevention strategies in agriculture. Future work will focus on optimizing the models for IoT device deployment, incorporating chatbot technology, and more sensor data will be incorporated for improved accuracy and evaluation of the models in a field environment.
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Affiliation(s)
| | - Emmanuel Masabo
- African Centre of Excellence in Internet of Things (ACEIoT) - University of Rwanda (UR), Rwanda
| | - Pierre Bakunzibake
- African Centre of Excellence in Internet of Things (ACEIoT) - University of Rwanda (UR), Rwanda
| | - Kwang Soo Kim
- Global Research and Development Business Centre (GRC-SNU) -Seoul National University (SNU), South Korea
| | - Jimmy Nsenga
- African Centre of Excellence in Internet of Things (ACEIoT) - University of Rwanda (UR), Rwanda
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Ghaempour M, Hassanli K, Abiri E. An approach to detect and predict epileptic seizures with high accuracy using convolutional neural networks and single-lead-ECG signal. Biomed Phys Eng Express 2024; 10:025041. [PMID: 38359446 DOI: 10.1088/2057-1976/ad29a3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 02/15/2024] [Indexed: 02/17/2024]
Abstract
One of the epileptic patients' challenges is to detect the time of seizures and the possibility of predicting. This research aims to provide an algorithm based on deep learning to detect and predict the time of seizure from one to two minutes before its occurrence. The proposed Convolutional Neural Network (CNN) can detect and predict the occurrence of focal epilepsy seizures through single-lead-ECG signal processing instead of using EEG signals. The structure of the proposed CNN for seizure detection and prediction is the same. Considering the requirements of a wearable system, after a few light pre-processing steps, the ECG signal can be used as input to the neural network without any manual feature extraction step. The desired neural network learns purposeful features according to the labelled ECG signals and then performs the classification of these signals. Training of 39-layer CNN for seizure detection and prediction has been done separately. The proposed method can detect seizures with an accuracy of 98.84% and predict them with an accuracy of 94.29%. With this approach, the ECG signal can be a promising indicator for the construction of portable systems for monitoring the status of epileptic patients.
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Affiliation(s)
- Mostafa Ghaempour
- Department of Electrical Engineering, Shiraz University of Technology, Shiraz, Iran
| | - Kourosh Hassanli
- Department of Electrical Engineering, Shiraz University of Technology, Shiraz, Iran
| | - Ebrahim Abiri
- Department of Electrical Engineering, Shiraz University of Technology, Shiraz, Iran
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Peng R, Du Z, Zhao C, Luo J, Liu W, Chen X, Wu D. Multi-Branch Mutual-Distillation Transformer for EEG-Based Seizure Subtype Classification. IEEE Trans Neural Syst Rehabil Eng 2024; 32:831-839. [PMID: 38349833 DOI: 10.1109/tnsre.2024.3365713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2024]
Abstract
Cross-subject electroencephalogram (EEG) based seizure subtype classification is very important in precise epilepsy diagnostics. Deep learning is a promising solution, due to its ability to automatically extract latent patterns. However, it usually requires a large amount of training data, which may not always be available in clinical practice. This paper proposes Multi-Branch Mutual-Distillation (MBMD) Transformer for cross-subject EEG-based seizure subtype classification, which can be effectively trained from small labeled data. MBMD Transformer replaces all even-numbered encoder blocks of the vanilla Vision Transformer by our designed multi-branch encoder blocks. A mutual-distillation strategy is proposed to transfer knowledge between the raw EEG data and its wavelets of different frequency bands. Experiments on two public EEG datasets demonstrated that our proposed MBMD Transformer outperformed several traditional machine learning and state-of-the-art deep learning approaches. To our knowledge, this is the first work on knowledge distillation for EEG-based seizure subtype classification.
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32
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Hernández-Nava G, Salazar-Colores S, Cabal-Yepez E, Ramos-Arreguín JM. Parallel Ictal-Net, a Parallel CNN Architecture with Efficient Channel Attention for Seizure Detection. SENSORS (BASEL, SWITZERLAND) 2024; 24:716. [PMID: 38339433 PMCID: PMC10856983 DOI: 10.3390/s24030716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Revised: 12/28/2023] [Accepted: 12/29/2023] [Indexed: 02/12/2024]
Abstract
Around 70 million people worldwide are affected by epilepsy, a neurological disorder characterized by non-induced seizures that occur at irregular and unpredictable intervals. During an epileptic seizure, transient symptoms emerge as a result of extreme abnormal neural activity. Epilepsy imposes limitations on individuals and has a significant impact on the lives of their families. Therefore, the development of reliable diagnostic tools for the early detection of this condition is considered beneficial to alleviate the social and emotional distress experienced by patients. While the Bonn University dataset contains five collections of EEG data, not many studies specifically focus on subsets D and E. These subsets correspond to EEG recordings from the epileptogenic zone during ictal and interictal events. In this work, the parallel ictal-net (PIN) neural network architecture is introduced, which utilizes scalograms obtained through a continuous wavelet transform to achieve the high-accuracy classification of EEG signals into ictal or interictal states. The results obtained demonstrate the effectiveness of the proposed PIN model in distinguishing between ictal and interictal events with a high degree of confidence. This is validated by the computing accuracy, precision, recall, and F1 scores, all of which consistently achieve around 99% confidence, surpassing previous approaches in the related literature.
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Affiliation(s)
- Gerardo Hernández-Nava
- Faculty of Engineering, Autonomous University of Querétaro, Queretaro 76140, Mexico; (G.H.-N.); (J.-M.R.-A.)
| | | | - Eduardo Cabal-Yepez
- Multidisciplinary Studies Department, Campus Yuriria, University of Guanajuato, Guanajuato 38954, Mexico;
| | - Juan-Manuel Ramos-Arreguín
- Faculty of Engineering, Autonomous University of Querétaro, Queretaro 76140, Mexico; (G.H.-N.); (J.-M.R.-A.)
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Rukhsar S, Tiwari AK. Lightweight convolution transformer for cross-patient seizure detection in multi-channel EEG signals. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2023; 242:107856. [PMID: 37857026 DOI: 10.1016/j.cmpb.2023.107856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 09/26/2023] [Accepted: 10/08/2023] [Indexed: 10/21/2023]
Abstract
BACKGROUND Epilepsy is a neurological illness affecting the brain that makes people more likely to experience frequent, spontaneous seizures. There has to be an accurate automated method for measuring seizures frequency and severity to assess the efficacy of pharmacological therapy for epilepsy. The drug quantities are often derived from patient reports which may cause significant issues owing to inadequate or inaccurate descriptions of seizures and their frequencies. METHODS AND MATERIALS This study proposes a novel deep learning architecture-based Lightweight Convolution Transformer (LCT). The Transformer model is able to learn spatial and temporal correlated information simultaneously from the multi-channel electroencephalogram (EEG) signal to detect seizures at smaller segment lengths. In the proposed work, the lack of translation equivariance and localization of ViT is reduced using convolution tokenization, and rich information from the Transformer encoder is extracted by sequence pooling instead of the learnable class token. RESULTS Extensive experimental results demonstrate that the proposed model on cross-patient learning can effectively detect seizures from the raw EEG signals. The accuracy and F1-score of seizure detection in the cross-patient case on the CHB-MIT dataset are 96.31% and 96.32%, respectively, at 0.5 sec segment length. In addition, the performance metrics show that the inclusion of inductive biases and attention-based pooling in the model enhances the performance and reduces the number of Transformer encoder layers, which significantly reduces the computational complexity. In this research, we provide a novel approach to enhance efficiency and simplify the architecture for multi-channel automated seizure detection.
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Affiliation(s)
- Salim Rukhsar
- Department of Electrical Engineering, Indian Institute of Technology Jodhpur, Rajasthan, 342030, India.
| | - Anil Kumar Tiwari
- Department of Electrical Engineering, Indian Institute of Technology Jodhpur, Rajasthan, 342030, India
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Shoeibi A, Ghassemi N, Khodatars M, Moridian P, Khosravi A, Zare A, Gorriz JM, Chale-Chale AH, Khadem A, Rajendra Acharya U. Automatic diagnosis of schizophrenia and attention deficit hyperactivity disorder in rs-fMRI modality using convolutional autoencoder model and interval type-2 fuzzy regression. Cogn Neurodyn 2023; 17:1501-1523. [PMID: 37974583 PMCID: PMC10640504 DOI: 10.1007/s11571-022-09897-w] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Revised: 09/23/2022] [Accepted: 10/04/2022] [Indexed: 11/13/2022] Open
Abstract
Nowadays, many people worldwide suffer from brain disorders, and their health is in danger. So far, numerous methods have been proposed for the diagnosis of Schizophrenia (SZ) and attention deficit hyperactivity disorder (ADHD), among which functional magnetic resonance imaging (fMRI) modalities are known as a popular method among physicians. This paper presents an SZ and ADHD intelligent detection method of resting-state fMRI (rs-fMRI) modality using a new deep learning method. The University of California Los Angeles dataset, which contains the rs-fMRI modalities of SZ and ADHD patients, has been used for experiments. The FMRIB software library toolbox first performed preprocessing on rs-fMRI data. Then, a convolutional Autoencoder model with the proposed number of layers is used to extract features from rs-fMRI data. In the classification step, a new fuzzy method called interval type-2 fuzzy regression (IT2FR) is introduced and then optimized by genetic algorithm, particle swarm optimization, and gray wolf optimization (GWO) techniques. Also, the results of IT2FR methods are compared with multilayer perceptron, k-nearest neighbors, support vector machine, random forest, and decision tree, and adaptive neuro-fuzzy inference system methods. The experiment results show that the IT2FR method with the GWO optimization algorithm has achieved satisfactory results compared to other classifier methods. Finally, the proposed classification technique was able to provide 72.71% accuracy.
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Affiliation(s)
- Afshin Shoeibi
- FPGA Lab, Faculty of Electrical Engineering, K. N. Toosi University of Technology, Tehran, Iran
| | - Navid Ghassemi
- Computer Engineering Department, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Marjane Khodatars
- Department of Medical Engineering, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - Parisa Moridian
- Faculty of Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Abbas Khosravi
- Institute for Intelligent Systems Research and Innovation (IISRI), Deakin University, Geelong, Australia
| | - Assef Zare
- Faculty of Electrical Engineering, Gonabad Branch, Islamic Azad University, Gonabad, Iran
| | - Juan M Gorriz
- Department of Signal Theory, Networking and Communications, Universidad de Granada, Granada, Spain
| | | | - Ali Khadem
- Faculty of Electrical Engineering, K. N. Toosi University of Technology, Tehran, Iran
| | - U Rajendra Acharya
- Ngee Ann Polytechnic, Singapore, 599489 Singapore
- Department of Biomedical Informatics and Medical Engineering, Asia University, Taichung, Taiwan
- Department of Biomedical Engineering, School of Science and Technology, Singapore University of Social Sciences, Singapore, Singapore
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Cebral-Loureda M, Sanabria-Z J, Ramírez-Moreno MA, Kaminsky-Castillo I. One hundred years of neurosciences in the arts and humanities, a bibliometric review. Philos Ethics Humanit Med 2023; 18:17. [PMID: 37946225 PMCID: PMC10633938 DOI: 10.1186/s13010-023-00147-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 10/26/2023] [Indexed: 11/12/2023] Open
Abstract
BACKGROUND Neuroscientific approaches have historically triggered changes in the conception of creativity and artistic experience, which can be revealed by noting the intersection of these fields of study in terms of variables such as global trends, methodologies, objects of study, or application of new technologies; however, these neuroscientific approaches are still often considered as disciplines detached from the arts and humanities. In this light, the question arises as to what evidence the history of neurotechnologies provides at the intersection of creativity and aesthetic experience. METHODS We conducted a century-long bibliometric analysis of key parameters in multidisciplinary studies published in the Scopus database. Screening techniques based on the PRISMA method and advanced data analysis techniques were applied to 3612 documents metadata from the years 1922 to 2022. We made graphical representations of the results applying algorithmic and clusterization processes to keywords and authors relationships. RESULTS From the analyses, we found a) a shift from a personality-focus quantitative analysis to a field-focus qualitative approach, considering topics such as art, perception, aesthetics and beauty; b) The locus of interest in fMRI-supported neuroanatomy has been shifting toward EEG technologies and models based on machine learning and deep learning in recent years; c) four main clusters were identified in the study approaches: humanistic, creative, neuroaesthetic and medical; d) the neuroaesthetics cluster is the most central and relevant, mediating between creativity and neuroscience; e) neuroaesthetics and neuroethics are two of the neologism that better characterizes the challenges that this convergence of studies will have in the next years. CONCLUSIONS Through a longitudinal analysis, we evidenced the great influence that neuroscience is having on the thematic direction of the arts and humanities. The perspective presented shows how this field is being consolidated and helps to define it as a new opportunity of great potential for future researchers.
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Affiliation(s)
- Manuel Cebral-Loureda
- Humanistic Studies Department, School of Humanities and Education, Tecnologico de Monterrey, Monterrey, Mexico
| | - Jorge Sanabria-Z
- Institute for the Future of Education, Tecnologico de Monterrey, Monterrey, Mexico.
| | - Mauricio A Ramírez-Moreno
- Mechatronics Department, School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey, Mexico
| | - Irina Kaminsky-Castillo
- Mechatronics Department, School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey, Mexico
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Ojanen P, Kertész C, Morales E, Rai P, Annala K, Knight A, Peltola J. Automatic classification of hyperkinetic, tonic, and tonic-clonic seizures using unsupervised clustering of video signals. Front Neurol 2023; 14:1270482. [PMID: 38020607 PMCID: PMC10652877 DOI: 10.3389/fneur.2023.1270482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 10/12/2023] [Indexed: 12/01/2023] Open
Abstract
Introduction This study evaluated the accuracy of motion signals extracted from video monitoring data to differentiate epileptic motor seizures in patients with drug-resistant epilepsy. 3D near-infrared video was recorded by the Nelli® seizure monitoring system (Tampere, Finland). Methods 10 patients with 130 seizures were included in the training dataset, and 17 different patients with 98 seizures formed the testing dataset. Only seizures with unequivocal hyperkinetic, tonic, and tonic-clonic semiology were included. Motion features from the catch22 feature collection extracted from video were explored to transform the patients' videos into numerical time series for clustering and visualization. Results Changes in feature generation provided incremental discrimination power to differentiate between hyperkinetic, tonic, and tonic-clonic seizures. Temporal motion features showed the best results in the unsupervised clustering analysis. Using these features, the system differentiated hyperkinetic, tonic and tonic-clonic seizures with 91, 88, and 45% accuracy after 100 cross-validation runs, respectively. F1-scores were 93, 90, and 37%, respectively. Overall accuracy and f1-score were 74%. Conclusion The selected features of motion distinguished semiological differences within epileptic seizure types, enabling seizure classification to distinct motor seizure types. Further studies are needed with a larger dataset and additional seizure types. These results indicate the potential of video-based hybrid seizure monitoring systems to facilitate seizure classification improving the algorithmic processing and thus streamlining the clinical workflow for human annotators in hybrid (algorithmic-human) seizure monitoring systems.
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Affiliation(s)
- Petri Ojanen
- Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland
- Neuro Event Labs, Tampere, Finland
| | | | | | | | | | | | - Jukka Peltola
- Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland
- Neuro Event Labs, Tampere, Finland
- Department of Neurology, Tampere University Hospital, Tampere, Finland
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Stephens CM, Mathieson SR, McNamara B, McSweeney N, O'Brien R, O'Mahony O, Boylan GB, Murray DM. Electroencephalography Quality and Application Times in a Pediatric Emergency Department Setting: A Feasibility Study. Pediatr Neurol 2023; 148:82-85. [PMID: 37690268 DOI: 10.1016/j.pediatrneurol.2023.08.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Revised: 06/06/2023] [Accepted: 08/14/2023] [Indexed: 09/12/2023]
Abstract
BACKGROUND Status epilepticus is the most common neurological emergency presenting to pediatric emergency departments. Nonconvulsive status epilepticus can be extremely challenging to diagnose, however, requiring electroencephalographic (EEG) confirmation for definitive diagnosis. We aimed to determine the feasibility of achieving a good-quality pediatric EEG recording within 20 minutes of presentation to the emergency department. METHODS Single-center prospective feasibility study in Cork University Hospital, Ireland, between July 2021 and June 2022. Two-channel continuous EEG was recorded from children (1) aged <16 years and (2) with Glasgow Coma Scale <11 or a reduction in baseline Glasgow Coma Scale in the case of a child with a neurodisability. RESULTS Twenty patients were included. The median age at presentation was 65.8 months (interquartile range, 23.2 to 119.0); 50% had a background diagnosis of epilepsy. The most common reason for EEG monitoring was status epilepticus (85%) followed by suspected nonconvulsive status (10%) and reduced consciousness of unknown etiology (5%). The mean length of recording was 93.1 minutes (S.D. 47.4). The mean time to application was 41.3 minutes (S.D. 11.7). The mean percent of artifact in all recordings was 19.3% (S.D. 15.9). Thirteen (65%) EEGs had <25% artifact. Artifact was higher in cases in which active airway management was ongoing. CONCLUSIONS EEG monitoring can be achieved in a pediatric emergency department setting within one hour of presentation. Overall, artifact percentage was low outside of periods of airway manipulation. Future studies are required to determine its use in early seizure detection and its support role in clinical decision-making in these patients.
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Affiliation(s)
- Carol M Stephens
- INFANT Research Centre, University College Cork, Cork, Ireland; Department of Paediatrics and Child Health, University College Cork, Cork, Ireland.
| | - Sean R Mathieson
- INFANT Research Centre, University College Cork, Cork, Ireland; Department of Paediatrics and Child Health, University College Cork, Cork, Ireland
| | - Brian McNamara
- Department of Neurophysiology, Cork University Hospital, Cork, Ireland
| | - Niamh McSweeney
- Department of Paediatrics and Child Health, University College Cork, Cork, Ireland; Department of Paediatric Neurology, Cork University Hospital, Cork, Ireland
| | - Rory O'Brien
- Department of Emergency Medicine, Cork University Hospital, Cork, Ireland
| | - Olivia O'Mahony
- Department of Paediatric Neurology, Cork University Hospital, Cork, Ireland
| | - Geraldine B Boylan
- INFANT Research Centre, University College Cork, Cork, Ireland; Department of Paediatrics and Child Health, University College Cork, Cork, Ireland
| | - Deirdre M Murray
- INFANT Research Centre, University College Cork, Cork, Ireland; Department of Paediatrics and Child Health, University College Cork, Cork, Ireland
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Jafari M, Shoeibi A, Khodatars M, Bagherzadeh S, Shalbaf A, García DL, Gorriz JM, Acharya UR. Emotion recognition in EEG signals using deep learning methods: A review. Comput Biol Med 2023; 165:107450. [PMID: 37708717 DOI: 10.1016/j.compbiomed.2023.107450] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 08/03/2023] [Accepted: 09/01/2023] [Indexed: 09/16/2023]
Abstract
Emotions are a critical aspect of daily life and serve a crucial role in human decision-making, planning, reasoning, and other mental states. As a result, they are considered a significant factor in human interactions. Human emotions can be identified through various sources, such as facial expressions, speech, behavior (gesture/position), or physiological signals. The use of physiological signals can enhance the objectivity and reliability of emotion detection. Compared with peripheral physiological signals, electroencephalogram (EEG) recordings are directly generated by the central nervous system and are closely related to human emotions. EEG signals have the great spatial resolution that facilitates the evaluation of brain functions, making them a popular modality in emotion recognition studies. Emotion recognition using EEG signals presents several challenges, including signal variability due to electrode positioning, individual differences in signal morphology, and lack of a universal standard for EEG signal processing. Moreover, identifying the appropriate features for emotion recognition from EEG data requires further research. Finally, there is a need to develop more robust artificial intelligence (AI) including conventional machine learning (ML) and deep learning (DL) methods to handle the complex and diverse EEG signals associated with emotional states. This paper examines the application of DL techniques in emotion recognition from EEG signals and provides a detailed discussion of relevant articles. The paper explores the significant challenges in emotion recognition using EEG signals, highlights the potential of DL techniques in addressing these challenges, and suggests the scope for future research in emotion recognition using DL techniques. The paper concludes with a summary of its findings.
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Affiliation(s)
- Mahboobeh Jafari
- Data Science and Computational Intelligence Institute, University of Granada, Spain
| | - Afshin Shoeibi
- Data Science and Computational Intelligence Institute, University of Granada, Spain.
| | - Marjane Khodatars
- Data Science and Computational Intelligence Institute, University of Granada, Spain
| | - Sara Bagherzadeh
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Ahmad Shalbaf
- Department of Biomedical Engineering and Medical Physics, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - David López García
- Data Science and Computational Intelligence Institute, University of Granada, Spain
| | - Juan M Gorriz
- Data Science and Computational Intelligence Institute, University of Granada, Spain; Department of Psychiatry, University of Cambridge, UK
| | - U Rajendra Acharya
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia
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Kotloski RJ. A machine learning approach to seizure detection in a rat model of post-traumatic epilepsy. Sci Rep 2023; 13:15807. [PMID: 37737238 PMCID: PMC10517002 DOI: 10.1038/s41598-023-40628-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 08/14/2023] [Indexed: 09/23/2023] Open
Abstract
Epilepsy is a common neurologic condition frequently investigated using rodent models, with seizures identified by electroencephalography (EEG). Given technological advances, large datasets of EEG are widespread and amenable to machine learning approaches for identification of seizures. While such approaches have been explored for human EEGs, machine learning approaches to identifying seizures in rodent EEG are limited. We utilized a predesigned deep convolutional neural network (DCNN), GoogLeNet, to classify images for seizure identification. Training images were generated through multiplexing spectral content (scalograms), kurtosis, and entropy for two-second EEG segments. Over 2200 h of EEG data were scored for the presence of seizures, with 95.6% of seizures identified by the DCNN and a false positive rate of 34.2% (1.52/h), as compared to visual scoring. Multiplexed images were superior to scalograms alone (scalogram-kurtosis-entropy 0.956 ± 0.010, scalogram 0.890 ± 0.028, t(7) = 3.54, p < 0.01) and a DCNN trained specifically for the individual animal was superior to using DCNNs across animals (intra-animal 0.960 ± 0.0094, inter-animal 0.811 ± 0.015, t(30) = 5.54, p < 0.01). For this dataset the DCNN approach is superior to a previously described algorithm utilizing longer local line lengths, calculated from wavelet-decomposition of EEG, to identify seizures. We demonstrate the novel use of a predesigned DCNN constructed to classify images, utilizing multiplexed images of EEG spectral content, kurtosis, and entropy, to rapidly and objectively identifies seizures in a large dataset of rat EEG with high sensitivity.
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Affiliation(s)
- Robert J Kotloski
- Department of Neurology, William S Middleton Memorial Veterans Hospital, Madison, WI, 53705, USA.
- Department of Neurology, University of Wisconsin School of Medicine and Public Health, 1685 Highland Avenue, Madison, WI, 53705-2281, USA.
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Peterson V, Kokkinos V, Ferrante E, Walton A, Merk T, Hadanny A, Saravanan V, Sisterson N, Zaher N, Urban A, Richardson RM. Deep net detection and onset prediction of electrographic seizure patterns in responsive neurostimulation. Epilepsia 2023; 64:2056-2069. [PMID: 37243362 DOI: 10.1111/epi.17666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 05/21/2023] [Accepted: 05/22/2023] [Indexed: 05/28/2023]
Abstract
OBJECTIVE Managing the progress of drug-resistant epilepsy patients implanted with the Responsive Neurostimulation (RNS) System requires the manual evaluation of hundreds of hours of intracranial recordings. The generation of these large amounts of data and the scarcity of experts' time for evaluation necessitate the development of automatic tools to detect intracranial electroencephalographic (iEEG) seizure patterns (iESPs) with expert-level accuracy. We developed an intelligent system for identifying the presence and onset time of iESPs in iEEG recordings from the RNS device. METHODS An iEEG dataset from 24 patients (36 293 recordings) recorded by the RNS System was used for training and evaluating a neural network model (iESPnet). The model was trained to identify the probability of seizure onset at each sample point of the iEEG. The reliability of the net was assessed and compared to baseline methods, including detections made by the device. iESPnet performance was measured using balanced accuracy and the F1 score for iESP detection. The prediction time was assessed via both the error and the mean absolute error. The model was evaluated following a hold-one-out strategy, and then validated in a separate cohort of 26 patients from a different medical center. RESULTS iESPnet detected the presence of an iESP with a mean accuracy value of 90% and an onset time prediction error of approximately 3.4 s. There was no relationship between electrode location and prediction outcome. Model outputs were well calibrated and unbiased by the RNS detections. Validation on a separate cohort further supported iESPnet applicability in real clinical scenarios. Importantly, RNS device detections were found to be less accurate and delayed in nonresponders; therefore, tools to improve the accuracy of seizure detection are critical for increasing therapeutic efficacy. SIGNIFICANCE iESPnet is a reliable and accurate tool with the potential to alleviate the time-consuming manual inspection of iESPs and facilitate the evaluation of therapeutic response in RNS-implanted patients.
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Affiliation(s)
- Victoria Peterson
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Instituto de Matemática Aplicada del Litoral, UNL-CONICET, Santa Fe, Argentina
| | - Vasileios Kokkinos
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Enzo Ferrante
- Research Institute for Signals, Systems, and Computational Intelligence, UNL-CONICET, Santa Fe, Argentina
| | - Ashley Walton
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Boston, Massachusetts, USA
| | - Timon Merk
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Movement Disorder and Neuromodulation Unit, Department of Neurology, Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Amir Hadanny
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Varun Saravanan
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
- Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Boston, Massachusetts, USA
| | - Nathaniel Sisterson
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
| | - Naoir Zaher
- Department of Neurology, Epilepsy Center at Orlando Health, Orlando, Florida, USA
| | - Alexandra Urban
- University of Pittsburgh Comprehensive Epilepsy Center, Pittsburgh, Pennsylvania, USA
| | - R Mark Richardson
- Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA
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Habtamu M, Tolosa K, Abera K, Demissie L, Samuel S, Temesgen Y, Zewde ET, Dawud AA. A novel wearable device for automated real-time detection of epileptic seizures. BMC Biomed Eng 2023; 5:7. [PMID: 37461102 DOI: 10.1186/s42490-023-00073-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 07/11/2023] [Indexed: 07/20/2023] Open
Abstract
BACKGROUND Epilepsy is a neurological disorder that has a variety of origins. It is caused by hyperexcitability and an imbalance between excitation and inhibition, which results in seizures. The World Health Organization (WHO) and its partners have classified epilepsy as a major public health concern. Over 50 million individuals globally are affected by epilepsy which shows that the patient's family, social, educational, and vocational activities are severely limited if seizures are not controlled. Patients who suffer from epileptic seizures have emotional, behavioral, and neurological issues. Alerting systems using a wearable sensor are commonly used to detect epileptic seizures. However, most of the devices have no multimodal systems that increase sensitivity and lower the false discovery rate for screening and intervention of epileptic seizures. Therefore, the objective of this project was, to design and develop an efficient, economical, and automatically detecting epileptic seizure device in real-time. METHODS Our design incorporates different sensors to assess the patient's condition such as an accelerometer, pulsoxymeter and vibration sensor which process body movement, heart rate variability, oxygen denaturation, and jerky movement respectively. The algorithm for real-time detection of epileptic seizures is based on the following: acceleration increases to a higher value of 23.4 m/s2 or decreases to a lower value of 10 m/s2 as energy is absorbed by the body, the heart rate increases by 10 bpm from the normal heart rate, oxygen denaturation is below 90% and vibration should be out of the range of 3 Hz -17 Hz. Then, a pulsoxymeter device was used as a gold standard to compare the heart rate variability and oxygen saturation sensor readings. The accuracy of the accelerometer and vibration sensor was also tested by a fast-moving and vibrating normal person's hand. RESULTS The prototype was built and subjected to different tests and iterations. The proposed device was tested for accuracy, cost-effectiveness and ease of use. An acceptable accuracy was achieved for the accelerometer, pulsoxymeter, and vibration sensor measurements, and the prototype was built only with a component cost of less than 40 USD excluding design, manufacturing, and other costs. The design is tested to see if it fits the design criteria; the results of the tests reveal that a large portion of the scientific procedures utilized in this study to identify epileptic seizures is effective. CONCLUSION This project is objectively targeted to design a medical device with multimodal systems that enable us to accurately detect epileptic seizures by detecting symptoms commonly associated with an episode of epileptic seizure and notifying a caregiver for immediate assistance. The proposed device has a great impact on reducing epileptic seizer mortality, especially in low-resource settings where both expertise and treatment are scarce.
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Affiliation(s)
- Mikael Habtamu
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Keneni Tolosa
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Kidus Abera
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Lamesgin Demissie
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Samrawit Samuel
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Yeabsera Temesgen
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Elbetel Taye Zewde
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia
| | - Ahmed Ali Dawud
- School of Biomedical Engineering, Jimma Institute of Technology, Jimma University, Jimma, Ethiopia.
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Singh A, Velagala VR, Kumar T, Dutta RR, Sontakke T. The Application of Deep Learning to Electroencephalograms, Magnetic Resonance Imaging, and Implants for the Detection of Epileptic Seizures: A Narrative Review. Cureus 2023; 15:e42460. [PMID: 37637568 PMCID: PMC10457132 DOI: 10.7759/cureus.42460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Accepted: 07/25/2023] [Indexed: 08/29/2023] Open
Abstract
Epilepsy is a neurological disorder characterized by recurrent seizures affecting millions worldwide. Medically intractable seizures in epilepsy patients are not only detrimental to the quality of life but also pose a significant threat to their safety. Outcomes of epilepsy therapy can be improved by early detection and intervention during the interictal window period. Electroencephalography is the primary diagnostic tool for epilepsy, but accurate interpretation of seizure activity is challenging and highly time-consuming. Machine learning (ML) and deep learning (DL) algorithms enable us to analyze complex EEG data, which can not only help us diagnose but also locate epileptogenic zones and predict medical and surgical treatment outcomes. DL models such as convolutional neural networks (CNNs), inspired by visual processing, can be used to classify EEG activity. By applying preprocessing techniques, signal quality can be enhanced by denoising and artifact removal. DL can also be incorporated into the analysis of magnetic resonance imaging (MRI) data, which can help in the localization of epileptogenic zones in the brain. Proper detection of these zones can help in good neurosurgical outcomes. Recent advancements in DL have facilitated the implementation of these systems in neural implants and wearable devices, allowing for real-time seizure detection. This has the potential to transform the management of drug-refractory epilepsy. This review explores the application of ML and DL techniques to Electroencephalograms (EEGs), MRI, and wearable devices for epileptic seizure detection. This review briefly explains the fundamentals of both artificial intelligence (AI) and DL, highlighting these systems' potential advantages and undeniable limitations.
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Affiliation(s)
- Arihant Singh
- Medicine, Jawaharlal Nehru Medical College, Datta Meghe Institute of Higher Education and Research, Wardha, IND
| | - Vivek R Velagala
- Medicine, Jawaharlal Nehru Medical College, Datta Meghe Institute of Higher Education and Research, Wardha, IND
| | - Tanishq Kumar
- Medicine, Jawaharlal Nehru Medical College, Datta Meghe Institute of Higher Education and Research, Wardha, IND
| | - Rajoshee R Dutta
- Medicine, Jawaharlal Nehru Medical College, Datta Meghe Institute of Higher Education and Research, Wardha, IND
| | - Tushar Sontakke
- Medicine, Jawaharlal Nehru Medical College, Datta Meghe Institute of Higher Education and Research, Wardha, IND
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Pale U, Teijeiro T, Atienza D. Importance of methodological choices in data manipulation for validating epileptic seizure detection models. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-7. [PMID: 38083016 DOI: 10.1109/embc40787.2023.10340493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
Epilepsy is a chronic neurological disorder that affects a significant portion of the human population and imposes serious risks in the daily life. Despite advances in machine learning and IoT, small, non-stigmatizing wearable devices for continuous monitoring and detection in outpatient environments are not yet widely available. Part of the reason is the complexity of epilepsy itself, including highly imbalanced data, multimodal nature, and very subject-specific signatures. However, another problem is the heterogeneity of methodological approaches in research, leading to slower progress, difficulty in comparing results, and low reproducibility. Therefore, this article identifies a wide range of methodological decisions that must be made and reported when training and evaluating the performance of epilepsy detection systems. We characterize the influence of individual choices using a typical ensemble random-forest model and the publicly available CHB-MIT database, providing a broader picture of each decision and giving good-practice recommendations, based on our experience, where possible.
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Pre-processed and combined EEG data for epileptic seizure classification using deep learning. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/13/2023]
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Dhoot R, Gupta V, Jain R. Seizure Detection Mechanism in Children. 2023 INTERNATIONAL CONFERENCE ON APPLIED INTELLIGENCE AND SUSTAINABLE COMPUTING (ICAISC) 2023:1-6. [DOI: 10.1109/icaisc58445.2023.10200483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2025]
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Eskofier BM, Klucken J. Predictive Models for Health Deterioration: Understanding Disease Pathways for Personalized Medicine. Annu Rev Biomed Eng 2023; 25:131-156. [PMID: 36854259 DOI: 10.1146/annurev-bioeng-110220-030247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/02/2023]
Abstract
Artificial intelligence (AI) and machine learning (ML) methods are currently widely employed in medicine and healthcare. A PubMed search returns more than 100,000 articles on these topics published between 2018 and 2022 alone. Notwithstanding several recent reviews in various subfields of AI and ML in medicine, we have yet to see a comprehensive review around the methods' use in longitudinal analysis and prediction of an individual patient's health status within a personalized disease pathway. This review seeks to fill that gap. After an overview of the AI and ML methods employed in this field and of specific medical applications of models of this type, the review discusses the strengths and limitations of current studies and looks ahead to future strands of research in this field. We aim to enable interested readers to gain a detailed impression of the research currently available and accordingly plan future work around predictive models for deterioration in health status.
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Affiliation(s)
- Bjoern M Eskofier
- Machine Learning and Data Analytics Lab, Department of Artificial Intelligence in Biomedical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany;
| | - Jochen Klucken
- Digital Medicine Group, Luxembourg Centre for Systems Biomedicine, Université du Luxembourg, Belvaux, Luxembourg
- Digital Medicine Group, Department of Precision Health, Luxembourg Institute of Health, Strassen, Luxembourg
- Centre Hospitalier de Luxembourg, Luxembourg City, Luxembourg
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Sharma M, Lodhi H, Yadav R, Elphick H, Acharya UR. Computerized detection of cyclic alternating patterns of sleep: A new paradigm, future scope and challenges. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2023; 235:107471. [PMID: 37037163 DOI: 10.1016/j.cmpb.2023.107471] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 02/24/2023] [Accepted: 03/06/2023] [Indexed: 05/08/2023]
Abstract
BACKGROUND AND OBJECTIVES Sleep quality is associated with wellness, and its assessment can help diagnose several disorders and diseases. Sleep analysis is commonly performed based on self-rating indices, sleep duration, environmental factors, physiologically and polysomnographic-derived parameters, and the occurrence of disorders. However, the correlation that has been observed between the subjective assessment and objective measurements of sleep quality is small. Recently, a few automated systems have been suugested to measure sleep quality to address this challenge. Sleep quality can be assessed by evaluating macrostructure-based sleep analysis via the examination of sleep cycles, namely Rapid Eye Movement (REM) and Non Rapid Eye Movement (NREM) with N1, N2, and N3 stages. However, macrostructure sleep analysis does not consider transitory phenomena like K-complexes and transient fluctuations, which are indispensable in diagnosing various sleep disorders. The CAP, part of the microstructure of sleep, may offer a more precise and relevant examination of sleep and can be considered one of the candidates to measure sleep quality and identify sleep disorders such as insomnia and apnea. CAP is characterized by very subtle changes in the brain's electroencephalogram (EEG) signals that occur during the NREM stage of sleep. The variations among these patterns in healthy subjects and subjects with sleep disorders can be used to identify sleep disorders. Studying CAP is highly arduous for human experts; thus, developing automated systems for assessing CAP is gaining momentum. Developing new techniques for automated CAP detection installed in clinical setups is essential. This paper aims to analyze the algorithms and methods presented in the literature for the automatic assessment of CAP and the development of CAP-based sleep markers that may enhance sleep quality assessment, helping diagnose sleep disorders. METHODS This literature survey examined the automated assessment of CAP and related parameters. We have reviewed 34 research articles, including fourteen ML, nine DL, and ten based on some other techniques. RESULTS The review includes various algorithms, databases, features, classifiers, and classification performances and their comparisons, advantages, and limitations of automated systems for CAP assessment. CONCLUSION A detailed description of state-of-the-art research findings on automated CAP assessment and associated challenges has been presented. Also, the research gaps have been identified based on our review. Further, future research directions are suggested for sleep quality assessment using CAP.
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Affiliation(s)
- Manish Sharma
- Department of Electrical and Computer Science Engineering, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, India.
| | - Harsh Lodhi
- Department of Electrical and Computer Science Engineering, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, India.
| | - Rishita Yadav
- Department of Electrical and Computer Science Engineering, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, India.
| | | | - U Rajendra Acharya
- Department of Bioinformatics and Medical Engineering, Asia University, Taichung 41354, Taiwan; School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia; Department of Biomedical Engineering, School of Science and Technology, Singapore.
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Jafari M, Shoeibi A, Khodatars M, Ghassemi N, Moridian P, Alizadehsani R, Khosravi A, Ling SH, Delfan N, Zhang YD, Wang SH, Gorriz JM, Alinejad-Rokny H, Acharya UR. Automated diagnosis of cardiovascular diseases from cardiac magnetic resonance imaging using deep learning models: A review. Comput Biol Med 2023; 160:106998. [PMID: 37182422 DOI: 10.1016/j.compbiomed.2023.106998] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2022] [Revised: 03/01/2023] [Accepted: 04/28/2023] [Indexed: 05/16/2023]
Abstract
In recent years, cardiovascular diseases (CVDs) have become one of the leading causes of mortality globally. At early stages, CVDs appear with minor symptoms and progressively get worse. The majority of people experience symptoms such as exhaustion, shortness of breath, ankle swelling, fluid retention, and other symptoms when starting CVD. Coronary artery disease (CAD), arrhythmia, cardiomyopathy, congenital heart defect (CHD), mitral regurgitation, and angina are the most common CVDs. Clinical methods such as blood tests, electrocardiography (ECG) signals, and medical imaging are the most effective methods used for the detection of CVDs. Among the diagnostic methods, cardiac magnetic resonance imaging (CMRI) is increasingly used to diagnose, monitor the disease, plan treatment and predict CVDs. Coupled with all the advantages of CMR data, CVDs diagnosis is challenging for physicians as each scan has many slices of data, and the contrast of it might be low. To address these issues, deep learning (DL) techniques have been employed in the diagnosis of CVDs using CMR data, and much research is currently being conducted in this field. This review provides an overview of the studies performed in CVDs detection using CMR images and DL techniques. The introduction section examined CVDs types, diagnostic methods, and the most important medical imaging techniques. The following presents research to detect CVDs using CMR images and the most significant DL methods. Another section discussed the challenges in diagnosing CVDs from CMRI data. Next, the discussion section discusses the results of this review, and future work in CVDs diagnosis from CMR images and DL techniques are outlined. Finally, the most important findings of this study are presented in the conclusion section.
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Affiliation(s)
- Mahboobeh Jafari
- Internship in BioMedical Machine Learning Lab, The Graduate School of Biomedical Engineering, UNSW Sydney, Sydney, NSW, 2052, Australia
| | - Afshin Shoeibi
- Internship in BioMedical Machine Learning Lab, The Graduate School of Biomedical Engineering, UNSW Sydney, Sydney, NSW, 2052, Australia; Data Science and Computational Intelligence Institute, University of Granada, Spain.
| | - Marjane Khodatars
- Data Science and Computational Intelligence Institute, University of Granada, Spain
| | - Navid Ghassemi
- Internship in BioMedical Machine Learning Lab, The Graduate School of Biomedical Engineering, UNSW Sydney, Sydney, NSW, 2052, Australia
| | - Parisa Moridian
- Data Science and Computational Intelligence Institute, University of Granada, Spain
| | - Roohallah Alizadehsani
- Institute for Intelligent Systems Research and Innovation, Deakin University, Geelong, Australia
| | - Abbas Khosravi
- Institute for Intelligent Systems Research and Innovation, Deakin University, Geelong, Australia
| | - Sai Ho Ling
- Faculty of Engineering and IT, University of Technology Sydney (UTS), Australia
| | - Niloufar Delfan
- Faculty of Computer Engineering, Dept. of Artificial Intelligence Engineering, K. N. Toosi University of Technology, Tehran, Iran
| | - Yu-Dong Zhang
- School of Computing and Mathematical Sciences, University of Leicester, Leicester, UK
| | - Shui-Hua Wang
- School of Computing and Mathematical Sciences, University of Leicester, Leicester, UK
| | - Juan M Gorriz
- Data Science and Computational Intelligence Institute, University of Granada, Spain; Department of Psychiatry, University of Cambridge, UK
| | - Hamid Alinejad-Rokny
- BioMedical Machine Learning Lab, The Graduate School of Biomedical Engineering, UNSW Sydney, Sydney, NSW, 2052, Australia; UNSW Data Science Hub, The University of New South Wales, Sydney, NSW, 2052, Australia; Health Data Analytics Program, Centre for Applied Artificial Intelligence, Macquarie University, Sydney, 2109, Australia
| | - U Rajendra Acharya
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia; Dept. of Biomedical Informatics and Medical Engineering, Asia University, Taichung, Taiwan
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Lu X, Wang T, Ye M, Huang S, Wang M, Zhang J. Study on characteristic of epileptic multi-electroencephalograph base on Hilbert-Huang transform and brain network dynamics. Front Neurosci 2023; 17:1117340. [PMID: 37214385 PMCID: PMC10192695 DOI: 10.3389/fnins.2023.1117340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Accepted: 04/11/2023] [Indexed: 05/24/2023] Open
Abstract
Lots of studies have been carried out on characteristic of epileptic Electroencephalograph (EEG). However, traditional EEG characteristic research methods lack exploration of spatial information. To study the characteristics of epileptic EEG signals from the perspective of the whole brain,this paper proposed combination methods of multi-channel characteristics from time-frequency and spatial domains. This paper was from two aspects: Firstly, signals were converted into 2D Hilbert Spectrum (HS) images which reflected the time-frequency characteristics by Hilbert-Huang Transform (HHT). These images were identified by Convolutional Neural Network (CNN) model whose sensitivity was 99.8%, accuracy was 98.7%, specificity was 97.4%, F1-score was 98.7%, and AUC-ROC was 99.9%. Secondly, the multi-channel signals were converted into brain networks which reflected the spatial characteristics by Symbolic Transfer Entropy (STE) among different channels EEG. And the results show that there are different network properties between ictal and interictal phase and the signals during the ictal enter the synchronization state more quickly, which was verified by Kuramoto model. To summarize, our results show that there was different characteristics among channels for the ictal and interictal phase, which can provide effective physical non-invasive indicators for the identification and prediction of epileptic seizures.
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Affiliation(s)
- Xiaojie Lu
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
- Research Center of Health Big Data Mining and Applications, School of Medicine Information, Wan Nan Medical College, Wuhu, China
| | - Tingting Wang
- Research Center of Health Big Data Mining and Applications, School of Medicine Information, Wan Nan Medical College, Wuhu, China
| | - Mingquan Ye
- Research Center of Health Big Data Mining and Applications, School of Medicine Information, Wan Nan Medical College, Wuhu, China
| | - Shoufang Huang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - Maosheng Wang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
| | - Jiqian Zhang
- School of Physics and Electronic Information, Anhui Normal University, Wuhu, China
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A difference attention ResNet-LSTM network for epileptic seizure detection using EEG signal. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
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