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Drakoulas G, Gortsas T, Polyzos E, Tsinopoulos S, Pyl L, Polyzos D. An explainable machine learning-based probabilistic framework for the design of scaffolds in bone tissue engineering. Biomech Model Mechanobiol 2024; 23:987-1012. [PMID: 38416219 DOI: 10.1007/s10237-024-01817-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Accepted: 01/01/2024] [Indexed: 02/29/2024]
Abstract
Recently, 3D-printed biodegradable scaffolds have shown great potential for bone repair in critical-size fractures. The differentiation of the cells on a scaffold is impacted among other factors by the surface deformation of the scaffold due to mechanical loading and the wall shear stresses imposed by the interstitial fluid flow. These factors are in turn significantly affected by the material properties, the geometry of the scaffold, as well as the loading and flow conditions. In this work, a numerical framework is proposed to study the influence of these factors on the expected osteochondral cell differentiation. The considered scaffold is rectangular with a 0/90 lay-down pattern and a four-layered strut made of polylactic acid with a 5% steel particle content. The distribution of the different types of cells on the scaffold surface is estimated through a scalar stimulus, calculated by using a mechanobioregulatory model. To reduce the simulation time for the computation of the stimulus, a probabilistic machine learning (ML)-based reduced-order model (ROM) is proposed. Then, a sensitivity analysis is performed using the Shapley additive explanations to examine the contribution of the various parameters to the framework stimulus predictions. In a final step, a multiobjective optimization procedure is implemented using genetic algorithms and the ROM, aiming to identify the material parameters and loading conditions that maximize the percentage of surface area populated by bone cells while minimizing the area corresponding to the other types of cells and the resorption condition. The results of the performed analysis highlight the potential of using ROMs for the scaffold design, by dramatically reducing the simulation time while enabling the efficient implementation of sensitivity analysis and optimization procedures.
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Affiliation(s)
- George Drakoulas
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504, Rio, Greece.
| | - Theodore Gortsas
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504, Rio, Greece.
- Department of Mechanical Engineering, University of Peloponnese, 26334, Patras, Greece.
| | - Efstratios Polyzos
- Department of Mechanics of Materials and Constructions, Vrije Universiteit Brussel (VUB), 1050, Brussels, Belgium
| | - Stephanos Tsinopoulos
- Department of Mechanical Engineering, University of Peloponnese, 26334, Patras, Greece
| | - Lincy Pyl
- Department of Mechanics of Materials and Constructions, Vrije Universiteit Brussel (VUB), 1050, Brussels, Belgium
| | - Demosthenes Polyzos
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504, Rio, Greece
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2
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Zhang B. Computational fluid dynamics analysis of the fluid environment of 3D printed gradient structure in interfacial tissue engineering. Med Eng Phys 2024; 128:104173. [PMID: 38789213 DOI: 10.1016/j.medengphy.2024.104173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Revised: 02/19/2024] [Accepted: 04/25/2024] [Indexed: 05/26/2024]
Abstract
Mass transport properties within three-dimensional (3D) scaffold are essential for tissue regeneration, such as various fluid environmental cues influence mesenchymal stem cells differentiation. Recently, 3D printing has been emerging as a new technology for scaffold fabrication by controlling the scaffold pore geometry to affect cell growth environment. In this study, the flow field within scaffolds in a perfusion system was investigated with uniform structures, single gradient structures and complex gradient structures using computational fluid dynamics (CFD) method. The CFD results from those uniform structures indicate the fluid velocity and fluid shear stress within the scaffold structure increased as the filament diameter increasing, pore width decreasing, pore shape decreased from 90° to 15°, and layer configuration changing from lattice to stagger structure. By assembling those uniform structure as single gradient structures, it is noted that the fluid dynamic characterisation within the scaffold remains the same as the corresponding uniform structures. A complex gradient structure was designed to mimic natural osteochondral tissue by assembly the uniform structures of filament diameter, pore width, pore shape and layer configuration. The results show that the fluid velocity and fluid shear stress within the complex gradient structure distribute gradually increasing and their maximum magnitude were from 1.15 to 3.20 mm/s, and from 12 to 39 mPa, respectively. CFD technique allows the prediction of velocity and fluid shear stress within the designed 3D gradient scaffolds, which would be beneficial for the tissue scaffold development for interfacial tissue engineering in the future.
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Affiliation(s)
- Bin Zhang
- Department of Mechanical and Aerospace, Brunel University London, London, United Kingdom.
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Chen H, Liu Y, Lu Y, Zhang A, Yang W, Han Q, Wang J. Bamboo-Inspired Porous Scaffolds for Advanced Orthopedic Implants: Design, Mechanical Properties, and Fluid Characteristics. ACS Biomater Sci Eng 2024; 10:1173-1189. [PMID: 38232356 DOI: 10.1021/acsbiomaterials.3c01690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2024]
Abstract
In orthopedic implant development, incorporating a porous structure into implants can reduce the elastic modulus to prevent stress shielding but may compromise yield strength, risking prosthesis fracture. Bamboo's natural structure, with its exceptional strength-to-weight ratio, serves as inspiration. This study explores biomimicry using bamboo-inspired porous scaffolds (BISs) resembling cortical bone, assessing their mechanical properties and fluid characteristics. The BIS consists of two 2D units controlled by structural parameters α and β. The mechanical properties, failure mechanisms, energy absorption, and predictive performance are investigated. BIS exhibits mechanical properties equivalent to those of natural bone. Specifically, α at 4/3 and β at 2/3 yield superior mechanical properties, and the destruction mechanism occurs layer by layer. Besides, the Gibson-Ashby models with different parameters are established to predict mechanical properties. Fluid dynamics analysis reveals two high-flow channels in BISs, enhancing nutrient delivery through high-flow channels and promoting cell adhesion and proliferation in low-flow regions. For wall shear stress below 30 mPa (ideal for cell growth), α at 4/3 achieves the highest percentage (99.04%), and β at 2/3 achieves 98.46%. Permeability in all structural parameters surpasses that of human bone. Enhanced performance of orthopedic implants through a bionic approach that enables the creation of pore structures suitable for implants.
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Affiliation(s)
- Hao Chen
- Department of Orthopedics, Second Hospital of Jilin University, Changchun, Jilin Province 130000, China
| | - Yang Liu
- Department of Orthopedics, Second Hospital of Jilin University, Changchun, Jilin Province 130000, China
| | - Yue Lu
- Key Laboratory of Bionic Engineering, Ministry of Education, Jilin University, Changchun, Jilin Province 130022, China
| | - Aobo Zhang
- Department of Orthopedics, Second Hospital of Jilin University, Changchun, Jilin Province 130000, China
| | - Wenbo Yang
- Department of Orthopedics, Second Hospital of Jilin University, Changchun, Jilin Province 130000, China
| | - Qing Han
- Department of Orthopedics, Second Hospital of Jilin University, Changchun, Jilin Province 130000, China
| | - Jincheng Wang
- Department of Orthopedics, Second Hospital of Jilin University, Changchun, Jilin Province 130000, China
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Kallivokas SV, Kontaxis LC, Psarras S, Roumpi M, Ntousi O, Kakkos I, Deligianni D, Matsopoulos GK, Fotiadis DI, Kostopoulos V. A Combined Computational and Experimental Analysis of PLA and PCL Hybrid Nanocomposites 3D Printed Scaffolds for Bone Regeneration. Biomedicines 2024; 12:261. [PMID: 38397863 PMCID: PMC10886521 DOI: 10.3390/biomedicines12020261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/12/2024] [Accepted: 01/16/2024] [Indexed: 02/25/2024] Open
Abstract
A combined computational and experimental study of 3D-printed scaffolds made from hybrid nanocomposite materials for potential applications in bone tissue engineering is presented. Polycaprolactone (PCL) and polylactic acid (PLA), enhanced with chitosan (CS) and multiwalled carbon nanotubes (MWCNTs), were investigated in respect of their mechanical characteristics and responses in fluidic environments. A novel scaffold geometry was designed, considering the requirements of cellular proliferation and mechanical properties. Specimens with the same dimensions and porosity of 45% were studied to fully describe and understand the yielding behavior. Mechanical testing indicated higher apparent moduli in the PLA-based scaffolds, while compressive strength decreased with CS/MWCNTs reinforcement due to nanoscale challenges in 3D printing. Mechanical modeling revealed lower stresses in the PLA scaffolds, attributed to the molecular mass of the filler. Despite modeling challenges, adjustments improved simulation accuracy, aligning well with experimental values. Material and reinforcement choices significantly influenced responses to mechanical loads, emphasizing optimal structural robustness. Computational fluid dynamics emphasized the significance of scaffold permeability and wall shear stress in influencing bone tissue growth. For an inlet velocity of 0.1 mm/s, the permeability value was estimated at 4.41 × 10-9 m2, which is in the acceptable range close to human natural bone permeability. The average wall shear stress (WSS) value that indicates the mechanical stimuli produced by cells was calculated to be 2.48 mPa, which is within the range of the reported literature values for promoting a higher proliferation rate and improving osteogenic differentiation. Overall, a holistic approach was utilized to achieve a delicate balance between structural robustness and optimal fluidic conditions, in order to enhance the overall performance of scaffolds in tissue engineering applications.
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Affiliation(s)
- Spyros V. Kallivokas
- Biomedical Engineering Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Athens, Greece
- Computation-Based Science and Technology Research Center, The Cyprus Institute, 2121 Nicosia, Cyprus
| | - Lykourgos C. Kontaxis
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504 Patras, Greece
| | - Spyridon Psarras
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504 Patras, Greece
| | - Maria Roumpi
- Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, 45110 Ioannina, Greece
| | - Ourania Ntousi
- Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, 45110 Ioannina, Greece
| | - Iοannis Kakkos
- Biomedical Engineering Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Athens, Greece
| | - Despina Deligianni
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504 Patras, Greece
| | - George K. Matsopoulos
- Biomedical Engineering Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, 15773 Athens, Greece
| | - Dimitrios I. Fotiadis
- Unit of Medical Technology and Intelligent Information Systems, Department of Materials Science and Engineering, University of Ioannina, 45110 Ioannina, Greece
| | - Vassilis Kostopoulos
- Department of Mechanical Engineering and Aeronautics, University of Patras, 26504 Patras, Greece
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Lu T, Sun Z, Jia C, Ren J, Li J, Ma Z, Zhang J, Li J, Zhang T, Zang Q, Yang B, Yang P, Wang D, Li H, Qin J, He X. Roles of irregularity of pore morphology in osteogenesis of Voronoi scaffolds: From the perspectives of MSC adhesion and mechano-regulated osteoblast differentiation. J Biomech 2023; 151:111542. [PMID: 36958090 DOI: 10.1016/j.jbiomech.2023.111542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 02/16/2023] [Accepted: 03/07/2023] [Indexed: 03/25/2023]
Abstract
Bone scaffolds designed based on the Voronoi-tessellation algorithm have been increasingly studied owing to their structural similarity with natural cancellous bone. The irregularity of pore morphology (IPM) influences the osteogenesis efficiency of Voronoi scaffolds since it may alter the static and hydromechanical microenvironments for the initial adhesion and mechano-regulated osteoblast differentiation (MrOD) of mesenchymal stem cells (MSCs). In this work, animal experiments were conducted to explore the relationship between IPM and osteogenesis efficiency in Voronoi scaffolds. A computational fluid dynamics (CFD) analysis based on discrete phase models was performed to predict the efficiency of MSC adhesion in different IPMs. Another combined finite element and CFD analysis based on the mechano-regulation algorithm was performed to predict the influence of IPM on the MrOD of the adhesive MSCs. The results showed that the osteogenesis efficiency of the Voronoi scaffolds increased as the IPM rose from low to moderate and then dropped as the IPM further rose. Same trends were also found in the MSC adhesion and MrOD, which caused by the changes of strain tensors on the strut surface and the tortuosity and fluid velocity of the fluid pathway. Moderate IPM induced the highest osteogenesis efficiency owing to its highest efficiencies of MSC adhesion and MrOD. This work identified the optimal IPM for the osteogenesis of Voronoi scaffolds and clarified its biomechanical mechanisms from the adhesion and mechano-regulated differentiation of MSCs, which is of great importance for guiding Voronoi scaffold design when it is used for bone defect repair.
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Affiliation(s)
- Teng Lu
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Zhongwei Sun
- Department of Engineering Mechanics, School of Civil Engineering, Southeast University, Nanjing, Jiangsu Province, China
| | - Cunwei Jia
- Department of Medical Imaging, School of Medicine, Affiliated Hospital of Jining Medical University, Jining, Shandong Province, China
| | - Jiakun Ren
- Department of Nuclear Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science, and Peking Union Medical College, Beijing, China
| | - Jie Li
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Zhiyuan Ma
- Department of Material Research, National Institution Corporation of Additive Manufacturing, Xi'an, Shaanxi Province, China
| | - Jing Zhang
- Department of Research and Development, ZSFab, Inc., Boston, MA, USA
| | - Jialiang Li
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Ting Zhang
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Quanjin Zang
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Baohui Yang
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Pinglin Yang
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Dong Wang
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Haopeng Li
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China
| | - Jie Qin
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China.
| | - Xijing He
- Department of Orthopedics, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China.
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Uskoković V. Micronesian maritime piloting charts as bioimaging proxies for the rescue of cells on the apoptotic trajectory. Heliyon 2022; 8:e12035. [PMID: 36582720 PMCID: PMC9792799 DOI: 10.1016/j.heliyon.2022.e12035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Revised: 09/30/2022] [Accepted: 11/24/2022] [Indexed: 12/13/2022] Open
Abstract
This interdisciplinary study falls within the realm of ethnoscience thanks to its resorting to the scientific methods behind the Micronesian canoe voyaging in search of bioimaging tools for the early prediction of cell fate in response to a therapy. Two distinct indigenous methods for navigation across the ocean were assessed as bridges for correlating (i) the interaction of oceanic swells near atolls with the way microcurrents in the cell culture dish may shape the morphology of cells, and (ii) the spatial arrangement of cultured cells with the canoe voyaging from one island to the next. Both methods effectively predicted the cell fate at early time points in the treatment with superparamagnetic nanoparticles, when the adverse effects were still reversible and not apparent yet at the levels of cell morphology, proliferation rate or confluence. The mattang chart, the most fundamental and theoretical of navigational devices used in the Marshallese seafaring tradition, was used to measure subtle morphological changes occurring in cells due to the treatment. The cells subjected to the treatment were consistently withdrawing their bodies from the areas of intense swell interaction activity on the superimposed mattangs. Given that the cytoskeletal microfilaments defining the features of control cells were largely filling up these areas, this metric proved useful for deducing the course of the treatment at its early stages. The same deduction was proven feasible with the use of a Carolinian navigational technique based on the concept of the etak, in which case the distances traversable between cells in a population subjected to the treatment were divisible to a significantly higher number of etaks than the same distances in the population of control cells. Therefore, treating cells and their nuclei as analogous to Pacific atolls navigable to and fro with the use of imaginary microscopic canoes and the navigational principles native to the Marshall and the Caroline Islands proves as a clever, but also very effective cell fate prediction approach, which various branches of biomedical science could take advantage of. These practical benefits notwithstanding, this conceptual study was performed primarily with a goal to spark the interest in studying these and other ancient ethnoscientific inventions as potential addenda to the broad repertoire of techniques used in biomedical and other sciences to combat some of their greatest challenges.
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Affiliation(s)
- Vuk Uskoković
- Advanced Materials and Nanobiotechnology Laboratory, TardigradeNano, 7 Park Vista, Irvine, CA, 92604, USA,Department of Mechanical Engineering, San Diego State University, 5500 Campanile Dr., San Diego, CA, 92182, USA,Corresponding author.
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