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Liu X, Zhong L, Yang R, Wang H, Liu X, Xue W, Yang H, Shen Y, Li J, Sun Z. Modifying soil bacterial communities in saline mudflats with organic acids and substrates. Front Microbiol 2024; 15:1392441. [PMID: 38706968 PMCID: PMC11066327 DOI: 10.3389/fmicb.2024.1392441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 04/11/2024] [Indexed: 05/07/2024] Open
Abstract
Aims The high salinity of soil, nutrient scarcity, and poor aggregate structure limit the exploitation and utilization of coastal mudflat resources and the sustainable development of saline soil agriculture. In this paper, the effects of applying exogenous organic acids combined with biological substrate on the composition and diversity of soil bacterial community were studied in moderately saline mudflats in Jiangsu Province. Methods A combination of three exogenous organic acids (humic acid, fulvic acid, and citric acid) and four biological substrates (cottonseed hull, cow manure, grass charcoal, and pine needle) was set up set up on a coastal saline mudflat planted with a salt-tolerant forage grass, sweet sorghum. A total of 120 kg ha-1 of organic acids and 5,000 kg ha-1 of substrates were used, plus two treatments, CK without application of organic acids and substrates and CK0 in bare ground, for a total of 14 treatments. Results No significant difference was found in the alpha diversity of soil bacterial community among all treatments (p ≥ 0.05), with the fulvic acid composite pine needle (FPN) treatment showing the largest increase in each index. The beta diversity differed significantly (p < 0.05) among all treatments, and the difference between citric acid-grass charcoal (CGC) and CK treatments was greater than that of other treatments. All treatments were effective in increasing the number of bacterial ASVs and affecting the structural composition of the community. Citric acid-cow manure (CCM), FPN, and CGC treatments were found to be beneficial for increasing the relative abundance of Proteobacteria, Chloroflexi, and Actinobacteria, respectively. By contrast, all treatments triggered a decrease in the relative abundance of Acidobacteria. Conclusion Among the 12 different combinations of exogenous organic acid composite biomass substrates applied to the coastal beach, the CGC treatment was more conducive to increasing the relative abundance of the salt-tolerant bacteria Proteobacteria, Chloroflexi and Actinobacteria, and improving the community structure of soil bacteria. The FPN treatment was more conducive to increase the species diversity of the soil bacterial community and adjust the species composition of the bacterial community.
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Affiliation(s)
- Xiaoyu Liu
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - Liang Zhong
- School of Life Science, Nanjing University, Nanjing, China
| | - Ruixue Yang
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - Huiyan Wang
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - Xinbao Liu
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - Wei Xue
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - He Yang
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - Yixin Shen
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
| | - Jianlong Li
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
- School of Life Science, Nanjing University, Nanjing, China
| | - Zhengguo Sun
- College of Agro-grassland Science, Nanjing Agricultural University, Nanjing, China
- Nanjing University (Suzhou) High and New Technology Research Institute, Suzhou, China
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Bai X, Zhang E, Wu J, Ma D, Zhang C, Zhang B, Liu Y, Zhang Z, Tian F, Zhao H, Wang B. Soil fungal community is more sensitive than bacterial community to modified materials application in saline-alkali land of Hetao Plain. Front Microbiol 2024; 15:1255536. [PMID: 38374915 PMCID: PMC10875129 DOI: 10.3389/fmicb.2024.1255536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2023] [Accepted: 01/04/2024] [Indexed: 02/21/2024] Open
Abstract
Soil salinization has become a major challenge that severely threatens crop growth and influences the productivity of agriculture. It is urgent to develop effective management measures to improve saline-alkali soil. Thus, in this study, soil properties, microbial communities, and function under desulfurization gypsum (DE), soil amendment (SA), farm manure (FA), and co-application of desulfurization gypsum, soil amendment, and farm manure (TA) in a field experiment were examined by high-throughput sequencing. The results showed that the application of modified materials is an effective approach in improving saline-alkali soil, especially TA treatment significantly increased the content of available phosphorus (AP), available potassium (AK), soil organic matter (SOM), and alkaline hydrolysis nitrogen (AHN) and decreased pH, bulk density (BD), and electrical conductivity (EC). The application of modified materials resulted in notable enhancement in fungal diversity and altered the composition and structure of the fungal community. Conversely, the effect on the bacterial community was comparatively minor, with changes limited to the structure of the community. Regarding the fungal community composition, Ascomycota, Mortierellomycota, and Basidiomycota emerged as the dominant phyla across all treatments. At each taxonomic level, the community composition exhibited significant variations in response to different modified materials, resulting in divergent soil quality. The TA treatment led to a decrease in Mortierellomycota and an increase in Ascomycota, potentially enhancing the ability to decompose organic matter and facilitate soil nutrient cycling. Additionally, the sensitivity of fungal biomarkers to modified materials surpassed that of the bacterial community. The impact of modified materials on soil microbial communities primarily stemmed from alterations in soil EC, AP, AK, and SOM. FUNGuild analysis indicated that the saprotroph trophic mode group was the dominant component, and the application of modified materials notably increased the symbiotroph group. PICRUSt analysis revealed that metabolism was the most prevalent functional module observed at pathway level 1. Overall, the application of modified materials led to a decrease in soil EC and an increase in nutrient levels, resulting in more significant alterations in the soil fungal community, but it did not dramatically change the soil bacterial community. Our study provides new insights into the application of modified materials in increasing soil nutrients and altering soil microbial communities and functions and provides a better approach for improving saline-alkali soil of Hetao Plain.
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Affiliation(s)
- Xiaolong Bai
- College of Agriculture, Ningxia University, Yinchuan, China
| | - En Zhang
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Jinmin Wu
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Donghai Ma
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Chaohui Zhang
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Bangyan Zhang
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Yunpeng Liu
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Zhi Zhang
- College of Agriculture, Ningxia University, Yinchuan, China
| | - Feng Tian
- Tumote Right Banner Agricultural Technology Extension Center, Baotou, China
| | - Hui Zhao
- Tumote Right Banner Agricultural Technology Extension Center, Baotou, China
| | - Bin Wang
- College of Agriculture, Ningxia University, Yinchuan, China
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Patani A, Patel M, Islam S, Yadav VK, Prajapati D, Yadav AN, Sahoo DK, Patel A. Recent advances in Bacillus-mediated plant growth enhancement: a paradigm shift in redefining crop resilience. World J Microbiol Biotechnol 2024; 40:77. [PMID: 38253986 DOI: 10.1007/s11274-024-03903-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 01/18/2024] [Indexed: 01/24/2024]
Abstract
The Bacillus genus has emerged as an important player in modern agriculture, revolutionizing plant growth promotion through recent advances. This review provides a comprehensive overview of the critical role Bacillus species play in boosting plant growth and agricultural sustainability. Bacillus genus bacteria benefit plants in a variety of ways, according to new research. Nitrogen fixation, phosphate solubilization, siderophore production, and the production of growth hormones are examples of these. Bacillus species are also well-known for their ability to act as biocontrol agents, reducing phytopathogens and protecting plants from disease. Molecular biology advances have increased our understanding of the complex interplay between Bacillus species and plants, shedding light on the genetic and metabolic underpinnings of these interactions. Furthermore, novel biotechnology techniques have enabled the development of Bacillus-based biofertilizers and biopesticides, providing sustainable alternatives to conventional chemical inputs. Apart from this, the combination of biochar and Bacillus species in current biotechnology is critical for improving soil fertility and encouraging sustainable agriculture through enhanced nutrient retention and plant growth. This review also emphasizes the Bacillus genus bacteria's ability to alleviate environmental abiotic stresses such as drought and salinity, hence contributing to climate-resilient agriculture. Moreover, the authors discuss the challenges and prospects associated with the practical application of Bacillus-based solutions in the field. Finally, recent advances in Bacillus-mediated plant growth promotion highlight their critical significance in sustainable agriculture. Understanding these improvements is critical for realizing the full potential of Bacillus genus microorganisms to address current global food production concerns.
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Affiliation(s)
- Anil Patani
- Department of Biotechnology, Smt. S. S. Patel Nootan Science and Commerce College, Sankalchand Patel University, Visnagar, Gujarat, India
| | - Margi Patel
- Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, 384265, India
| | - Shaikhul Islam
- Plant Pathology Division, Wheat and Maize Research Institute, Nashipur, Dinajpur, 5200, Bangladesh
| | - Virendra Kumar Yadav
- Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, 384265, India
| | - Dharmendra Prajapati
- Department of Biotechnology, Smt. S. S. Patel Nootan Science and Commerce College, Sankalchand Patel University, Visnagar, Gujarat, India
| | - Ajar Nath Yadav
- Department of Biotechnology, Dr. KSG Akal College of Agriculture, Eternal University, Baru Sahib, Sirmour, Himachal Pradesh, 173101, India
| | - Dipak Kumar Sahoo
- Department of Veterinary Clinical Sciences, College of Veterinary Medicine, Iowa State University, Ames, USA
| | - Ashish Patel
- Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, 384265, India.
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Zhang S, Rasool G, Wang S, Zhang Y, Guo X, Wei Z, Zhang X, Yang X, Wang T. Biochar and Chlorella increase rice yield by improving saline-alkali soil physicochemical properties and regulating bacteria under aquaculture wastewater irrigation. CHEMOSPHERE 2023; 340:139850. [PMID: 37604341 DOI: 10.1016/j.chemosphere.2023.139850] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 08/13/2023] [Accepted: 08/15/2023] [Indexed: 08/23/2023]
Abstract
The combined effects of biochar and Chlorella under aquaculture wastewater irrigation in improving saline-alkali soil physicochemical properties, microbial communities, and rice yield, is not yet clear. This study utilized soil physicochemical indicators and gene sequencing to examine the effect of salinity stress, biochar and Chlorella under aquaculture wastewater irrigation on soil properties, bacterial community compositions, and rice production. Treatments included three factors in a randomized complete block design with three replications: (i) Biochar - 40 tons ha -1 (BW) versus no-biochar (BN); (ii) Salinity - 3‰ salinity (SH) versus 1‰ salinity (SL); and (iii) Chlorella - with 107 cells mL -1 Chlorella (CW) versus no-Chlorella (CN). The results revealed that increased salinity adversely affected the soil nutrients (TOC, NO3⁻-N, NH4+-N, Olsen-P), and enzyme activity (urease, sucrase, catalase), resulting in a 9.67% reduction in rice yield compared to SL treatment. However, the close correlation between alterations in soil bacterial communities, functions, and soil physicochemical properties, as well as rice yield, indicated that biochar and Chlorella promoted rice yield by enhancing the physicochemical properties of saline-alkali soil and bacterial community when irrigated with aquaculture wastewater: (1) addition of biochar increased the146.05% rice yield by increasing TOC content, the complexity of bacterial co-occurrence patterns, nitrogen fixation potential, and nitrification potential, (2) addition of Chlorella increased TOC, NO3⁻-N, NH4+-N, enhanced urease, sucrase, catalase activity, and nitrification potential to increased rice yield by 60.29%, and (3) compared with the treatment T3 (SHBNCN), the treatments with biochar (BW) and Chlorella (CW) increased the yield by 561.30% and 445.03% under 1‰ and 3‰ salinity, respectively. These findings provide novel perspectives on the capacity of biochar and Chlorella to improve saline-alkali soil properties and increase rice yield irrigated with aquaculture wastewater.
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Affiliation(s)
- Shuxuan Zhang
- College of Agricultural Science and Engineering, Hohai University, No.8 Focheng West Road, Nanjing, Jiangsu, 211100, China
| | - Ghulam Rasool
- College of Agricultural Science and Engineering, Hohai University, No.8 Focheng West Road, Nanjing, Jiangsu, 211100, China; College of Hydrology and Water Resources, Hohai University, Nanjing, 210024, China
| | - Shou Wang
- College of Agricultural Science and Engineering, Hohai University, No.8 Focheng West Road, Nanjing, Jiangsu, 211100, China
| | - Yiwen Zhang
- College of Agricultural Science and Engineering, Hohai University, No.8 Focheng West Road, Nanjing, Jiangsu, 211100, China
| | - Xiangping Guo
- College of Agricultural Science and Engineering, Hohai University, No.8 Focheng West Road, Nanjing, Jiangsu, 211100, China.
| | - Zhejun Wei
- Plant Nutrition and Fertilization Department, Guangxi South Subtropical Agricultural Science Research Institute, Chongzuo, 532415, China
| | - Xiaoyan Zhang
- College of Agricultural Science and Engineering, Hohai University, No.8 Focheng West Road, Nanjing, Jiangsu, 211100, China
| | - Xing Yang
- Institute of Rural Water Conservancy and Soil and Water Conservation, Jiangsu Hydraulic Research Institute, 210017, China
| | - Tongshun Wang
- Institute of Rural Water Conservancy and Soil and Water Conservation, Jiangsu Hydraulic Research Institute, 210017, China
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Li M, Chen C, Zhang H, Wang Z, Song N, Li J, Liang X, Yi K, Gu Y, Guo X. Effects of biochar amendment and organic fertilizer on microbial communities in the rhizosphere soil of wheat in Yellow River Delta saline-alkaline soil. Front Microbiol 2023; 14:1250453. [PMID: 37808323 PMCID: PMC10556502 DOI: 10.3389/fmicb.2023.1250453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 09/11/2023] [Indexed: 10/10/2023] Open
Abstract
The biochar and organic fertilizer amendment have been used as an effective practice to increase soil fertility. Nevertheless, the mechanisms of microbial community response to organic fertilizer and biochar application on saline-alkali soil have not been clarified. This study investigated the effects at different concentrations of organic fertilizer and biochar on the microbial community of wheat rhizosphere soil under field experiment in the Yellow River Delta (China, YRD), using high-throughput sequencing technology. Biochar and organic fertilizer significantly influenced in most soil parameters (p < 0.05), apart from soil moisture content (M), pH, total nitrogen (TN) and soil total phosphorus (TP). Proteobacteria and Actinobacteriota were found in the rhizosphere soil as the main bacterial phyla, and the main fungal phyla were Ascomycota and Mortierellomycota. The soil bacterial and fungal communities under organic fertilizer were distinct from CK. Furthermore, redundancy analysis (RDA) directed that changes in bacterial communities were related to soil properties like pH, available phosphorus (AP), and total organic carbon (TOC), while pH, AP and TP, were crucial contributors in regulating fungal distribution. The correlation between soil parameters and bacteria or fungi varied with the application of biochar and organic fertilizers, and the interaction between the bacteria and fungi in organic fertilizer treatments formed more connections compared with biochar treatments. Our results indicated that biochar was superior to organic fertilizer under the contents set up in this study, and soil parameters increased with biochar and organic fertilizer application rate. The diversity and structure of soil bacteria and fungi differed with the application of biochar and organic fertilizer. The research provides a reference to rational application of organic fertilizer and biochar improvement in saline-alkali soil.
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Affiliation(s)
- Meng Li
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Chuanjie Chen
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Haiyang Zhang
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Zongshuai Wang
- Crop Research Institute, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Ningning Song
- School of Resources and Environment, Qingdao Agricultural University, Qingdao, China
| | - Junlin Li
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Xiaoyan Liang
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Kuihua Yi
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Yinyu Gu
- Shandong Institute of Sericulture, Shandong Academy of Agricultural Sciences, Yantai, China
| | - Xiaohong Guo
- School of Resources and Environmental Engineering, Ludong University, Yantai, China
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