Pesticides: Behavior in Agricultural Soil and Plants

A cross-regional ecological assessment of contaminants in soils intended for agri-food initiatives on Indigenous Peoples' lands in Australia and Canada

Globally, soil contamination threatens ecosystems and food security. This study examines the contamination of soils intended for agri-food initiatives by Indigenous communities across New South Wales and Queensland, Australia, and Newfoundland and subarctic Ontario, Canada. Soils from 47 sites were tested for metals, metalloids, organochlorine (OC) pesticides, and polychlorinated biphenyls (PCBs) to assess ecological risks and compare against national guidelines. Australian soils were primarily contaminated with lead (Pb) and to a lesser extent with other metals and metalloids, whereas subarctic Ontario soils were heavily contaminated with OC pesticides, and to a lesser extent metals and metalloids. Newfoundland soils contained arsenic (As) concentrations exceeding agricultural soil guidelines with limited OC levels. The contaminants from these sites stem from both anthropogenic activities and natural geological sources; however, their precise origins-whether from the historical use of banned substances or mineral extraction-are not fully elucidated for all sites. This article specifically highlights the need to assess soil to be used in agri-food initiatives for contaminants in rural and remote landscapes in Indigenous homelands worldwide and, in general, for all soil to be used in any agri-food initiative.

Consumer Safety and Pesticide Residues: Evaluating Mitigation Protocols for Greengrocery

The application of pesticides remains a necessary measure for pest management in agriculture, particularly in the cultivation of fruits and vegetables. After harvest, the presence of pesticide residues in greengrocery (fruits and vegetables) is significantly influenced by various factors, including storage conditions, handling practices, and subsequent processing methods. The mitigation of these residues to levels compliant with regulated maximum thresholds ensures the safety of raw and processed fruits and vegetables for consumption. A contemporary survey of pesticide residues in greengrocery has gathered considerable attention from consumers, driven by concerns over the potential health risk of pesticide exposure. Consequently, consumers want to be extensively informed about household processing techniques to minimize associated risks. Meanwhile, a critical question arises: does household processing effectively eliminate pesticide residues? A comprehensive review of the literature reveals that conventional methods, such as washing and soaking, offer only limited reduction in residue levels, while emerging treatments, suitable both at household and industrial scale, demonstrate increased efficiency in residues mitigation. This study aims to emphasise the ubiquitous use of pesticides in crop cultivation while providing recommendations for the implementation of efficient treatment protocols to address residue concerns. Following upon available evidence and database mining, the worldwide purpose must be to outline agriculturally and economically viable strategies that prioritize both the health and safety of consumers, as well as the green cultivation and processing of fruits and vegetables.

Synergistic insights into pesticide persistence and microbial dynamics for bioremediation

Rampant use of fertilizers and pesticides for boosting agricultural crop productivity has proven detrimental impact on land, water, and air quality globally. Although fertilizers and pesticides ensure greater food security, their unscientific management negatively impacts soil fertility, structure of soil microbiome and ultimately human health and hygiene. Pesticides exert varying impacts on soil properties and microbial community functions, contingent on factors such as their chemical structure, mode of action, toxicity, and dose-response characteristics. The diversity of bacterial responses to different pesticides presents a valuable opportunity for pesticide remediation. In this context, OMICS technologies are currently under development, and notable advancements in gene editing, including CRISPR technologies, have facilitated bacterial engineering, opening promising avenues for reducing toxicity and enhancing biological remediation. This paper provides a holistic overview of pesticide dynamics, with a specific focus on organophosphate, organochlorine, and pyrethroids. It covers their occurrence, activity, and potential mitigation strategies, with an emphasis on the microbial degradation route. Subsequently, the pesticide degradation pathways, associated genes and regulatory mechanisms, associated OMICS approaches in soil microbes with a special emphasis on CRISPR/Cas9 are also being discussed. Here, we analyze key environmental factors that significantly impact pesticide degradation mechanisms and underscore the urgency of developing alternative strategies to diminish our reliance on synthetic chemicals.

Understanding the phytotoxic effects of organic contaminants on rice through predictive modeling with molecular descriptors: A data-driven analysis

The widespread introduction of organic compounds into environments poses significant risks to ecosystems. Assessing the adverse effects of organic contaminants on crops is crucial for ensuring food safety. However, laboratory research is often time-consuming and costly, and machine learning (ML) methods can offer a viable solution to address these challenges. This study aimed at developing a ML model that incorporates chemical descriptors to predict the phytotoxicity of organic contaminants on rice. A dataset was compiled by gathering published experimental data on the phytotoxicity of 60 organic compounds, with a focus on morphological inhibition, photosynthesis perturbation, and oxidative stress. Four ML models (RF, SVM, GBM, ANN) were developed using chemical molecular descriptors (CMD) and the Molecular ACCess System (MACCS) keys. RF-MACCS model demonstrated the highest fitness, achieving an R2 value of 0.79 and an RMSE of 0.14. Feature importance analysis highlighted nAtom, HBA, logKow, and TPSA as the most influential CMDs in our model. Additionally, substructures containing oxygen atoms, carbonyl group and carbon chains with nitrogen and oxygen atoms were identified as significant factors associated with phytotoxicity. This data-driven study could aid in predicting the phytotoxicity of organic contaminants on crops and evaluating the potential risks of emerging contaminants in agroecosystems.

Joint toxic mechanism of clothianidin and prochloraz in the earthworm (Eisenia fetida)

Pesticides are typically present as combinations within soil ecosystems and have detrimental effects on untamed surroundings. However, the collective impacts and fundamental mechanisms of pesticides on soil living beings are currently inadequately assessed. In our current work, we evaluated the interactive consequences of clothianidin (CLO) and prochloraz (PRO) on earthworms (Eisenia fetida) using several toxicological tests, such as acute adverse effects, biocatalytic activity, and alterations in transcriptional activity. The findings revealed that CLO (with a 14-day LC50 value of 6.08 mg kg-1) exhibited greater toxicity compared to PRO (with a 14-day LC50 value of 79.41 mg kg-1). Moreover, the combinations of CLO and PRO had synergistic acute effects on E. fetida. Additionally, the activities of POD, CAT, and GST were significantly varied in most instances of single and mixed treatments when compared to the control. Surprisingly, the transcriptional levels of four genes (gst, sod, crt, and ann), related to oxidative load, metabolic detoxification systems, endoplasmic reticulum, and oxytocin neuropeptide, respectively, were also altered in response to single and mixture exposures, as compared to the control. Alterations in enzyme activity and gene transcriptional level could serve as early indicators for detecting co-exposure to pesticides. The findings of this research offered valuable holistic understanding regarding the toxicity of pesticide combinations on earthworms. Further research should be conducted to investigate the persistent effects of pesticide mixtures on terrestrial invertebrates in order to draw definitive conclusions about the associated risks.

Nitrogen fertiliser-domesticated microbes change the persistence and metabolic profile of atrazine in soil

Pesticides and fertilisers are frequently used and may co-exist on farmlands. The overfertilisation of soil may have a profound influence on pesticide residues, but the mechanism remains unclear. The effects of chemical fertilisers on the environmental behaviour of atrazine and their underlying mechanisms were investigated. The present outcomes indicated that the degradation of atrazine was inhibited and the half-life was prolonged 6.0 and 7.6 times by urea and compound fertilisers (NPK) at 1.0 mg/g (nitrogen content), respectively. This result, which was confirmed in both sterilised and transfected soils, was attributed to the inhibitory effect of nitrogen fertilisers on soil microorganisms. The abundance of soil bacteria was inhibited by nitrogen fertilisers, and five families of potential atrazine degraders (Micrococcaceae, Rhizobiaceae, Bryobacteraceae, Chitinophagaceae, and Sphingomonadaceae) were strongly and positively (R > 0.8, sig < 0.05) related to the decreased functional genes (atzA and trzN), which inhibited hydroxylation metabolism and ultimately increased the half-life of atrazine. In addition, nitrogen fertilisers decreased the sorption and vertical migration behaviour of atrazine in sandy loam might increase the in-situ residual and ecological risk. Our findings verified the weakened atrazine degradation with nitrogen fertilisers, providing new insights into the potential risks and mechanisms of atrazine in the context of overfertilisation.

Polychlorinated biphenyl congeners in water canals and their relationships with water quality parameters: Insights into their risk assessment

Water pollution with pesticides is one of the most important environmental problems. Polychlorinated biphenyls (PCBs) reach water bodies via agricultural discharge. The aim of this study was to determine the contamination of different water bodies with PCB congeners, and detect the correlation between water quality parameters and seasonal distribution of these PCBs. The results indicated that water canals of AlGharbiah showed the highest ranges of temperature, total dissolved solids (TDS) in spring, and dissolved oxygen (DO) in autumn, while AlQaliobiah water bodies witnessed the highest pH and electrical conductivity (EC) ranges in summer. The highest range of a PCB congener was that of PCB44 (7.96-118.29 µg/g) in sediment samples of Giza, followed by its range (18.01-85.44 µgL-1) in surface water of AlQaliobiah. We found a potential cancer risk from dermal contact with all the investigated PCBs. Principal component analysis (PCA) showed positive correlations between most PCBs and each of EC and TDS, and a negative correlation with DO. While the correlation between PCBs and each of temperature and pH varied according to the geographic location of the governorate. In conclusion, the investigated water canals were contaminated with PCBs, which posed a potential cancer risk and deteriorated water quality.

Mechanistic insights into the effects of diuron exposure on Alexandrium pacificum

Diuron (N-(3,4-dichlorophenyl)-N,N‑dimethylurea, DCMU), a ureic herbicide, is extensively used in agriculture to boost crop productivity; however, its extensive application culminates in notable environmental pollution, especially in aquatic habitats. Therefore, the present study investigated the effect of diuron on the dinoflagellate Alexandrium pacificum, which is known to induce harmful algal blooms (HAB), and its potential to biodegrade DCMU. Following a four-day DCMU exposure, our results revealed that A. pacificum proficiently assimilated DCMU at concentrations of 0.05 mg/L and 0.1 mg/L in seawater, attaining a complete reduction (100 % efficiency) after 96 h for both concentrations. Moreover, evaluations of paralytic shellfish toxins content indicated that cells subjected to higher DCMU concentrations (0.1 mg/L) exhibited reductions of 73.4 %, 86.7 %, and 75 % in GTX1, GTX4, and NEO, respectively. Exposure to DCMU led to a notable decrease in A. pacificum's photosynthetic efficacy, accompanied by increased levels of reactive oxygen species (ROS) and suppressed cell growth, with a growth inhibition rate of 41.1 % at 72 h. Proteomic investigations pinpointed the diminished expression levels of specific proteins like SxtV and SxtW, linked to paralytic shellfish toxins (PSTs) synthesis, as well as key proteins associated with Photosystem II, namely PsbA, PsbD, PsbO, and PsbU. Conversely, proteins central to the cysteine biosynthesis pathways exhibited enhanced expression. In summary, our results preliminarily resolved the molecular mechanisms underlying the response of A. pacificum to DCMU and revealed that DCMU affected the synthesis of PSTs. Meanwhile, our data suggested that A. pacificum has great potential in scavenging DCMU.

In silico environmental risk assessment improves efficiency for pesticide safety management

Pesticides are indispensable to maintain crop quality and food production worldwide, but their use also poses environmental risks. Pesticide risk assessment involves a series of complex, expensive and time-consuming toxicity tests. To improve the efficiency and accuracy for assessing the environmental impact of pesticides, numerous computational tools have been developed. However, there is a notable deficiency in critical analysis or a systematic summary of environmental risk assessment tools and their applicable contexts. Here, many of the current approaches and tools for assessing environmental risks posed by pesticides are reviewed, and the question of whether these tools are fit for use on complex multicomponent scenarios is discussed. We analyze the adaptations of these tools to aquatic and terrestrial ecosystems, followed by the provision of resources for predicting pesticide concentrations in environmental medias, including air, soil and water. The successful application of computational tools for risk assessment and interpretation of predicted results will also be discussed. This assessment serves as a valuable resource, enabling scientists to utilize suitable models to enhance the robustness of pesticides risk assessments.

Assessing potential soil pollution from plant waste disposal: A modeling analysis of pesticide contamination

Pesticide residues can be taken up by plants after pesticide application, potentially resulting in soil pollution following the disposal of plant wastes at harvest. Currently, there is a lack of simple and efficient methods that can conduct high-throughput simulations to explore this problem across various chemicals and plant species. We present a modeling approach to simulating pesticide residue concentrations in soil as a result of plant waste disposal to assess the impact of plant wastes on agricultural soil pollution with respect to pesticide residues. This modeling approach employs well-established plant uptake models, providing versatility in evaluating different chemicals and plant species. The simulation process was tabulated in the spreadsheet interface, providing users with the flexibility to adjust input values for specific chemicals, plant species, and regions. The simulation results revealed that pesticides with relatively low lipophilicity (i.e., log KOW < 2) had low simulated residue concentrations in the soil as a result of plant waste disposal at harvest, whereas soil concentrations for lipophilic pesticides dramatically rose. This indicated that disposal of plant waste in agricultural soils will not pose significant ecological concerns to pesticides with low lipophilicity. The variability analysis showed that for certain pesticides, environmental factors (such as temperature and humidity) had a significant impact on the simulated residue concentrations in the soil as a result of plant waste disposal, which aided in the assessment of regional ecological risk as well as plant disposal management. Although some modeling aspects such as plant decomposition process, advanced plant uptake models, heterological distribution of residue concentrations in the soil, and plant waste stacking patterns require further research, the proposed approach can be used to assist in managing soil pesticides from plant waste disposal in preliminary stages.

Review on Pesticide Abiotic Stress over Crop Health and Intervention by Various Biostimulants

Plants are essential for life on earth, and agricultural crops are a primary food source for humans. For the One Health future, crop health is crucial for safe, high-quality agricultural products and the development of future green commodities. However, the overuse of pesticides in modern agriculture raises concerns about their adverse effects on crop resistance and product quality. Recently, biostimulants, including microecological bacteria agents and nanoparticles, have garnered worldwide interest for their ability to sustain plant health and enhance crop resistance. This review analyzed the effects and mechanisms of pesticide stress on crop health. It also investigated the regulation of biostimulants on crop health and the multiomics mechanism, combining research on nanoselenium activating various crop health aspects conducted by the authors' research group. The paper helps readers understand the impact of pesticides on crop health and the positive influence of various biostimulants, especially nanomaterials and small molecules, on crop health.

GC-ToF-MS Profiling and In Vitro Inhibitory Effects of Selected South African Plants against Important Mycotoxigenic Phytopathogens

The harmful effects following the ingestion of mycotoxin-contaminated food include the induction of cancers, mutagenicity, immune suppression, and toxicities that target organs of the digestive, cardiovascular, and central nervous systems. Synthetic fungicides are generally associated with a high toxic residue in food and the development of excessive fungal resistance. This study aimed to determine the antifungal activities against mycotoxigenic fungi of selected South African plant leaves and potentially develop plant-derived bio-fungicides, and, furthermore, to explore the in vitro antioxidant activity and the phytochemical spectra of the compounds of the selected medicinal plant extracts. The extracts were tested for antifungal activity against phytopathogenic strains using a microdilution broth assay. Bauhinia galpinii extracts exhibited the lowest minimum inhibitory concentration (MIC) against C. cladospoides and P. haloterans at 24 h incubation periods. C. caffrum had good antioxidant activity against 2,2-diphenyl-1-picrylhydrazyl (DPPH) with 50% inhibitory concentration (IC50) values of 0.013 mg/mL while B. galpini had IC50 values of 0.053 against free radicals of 2,2'-azinobis (3-ethylbenzthiazoline-6-suphonic acid (ABTS). The antimycotoxigenic and antioxidant activity exerted by both B. galpinii and C. caffrum may well be attributed to high TPC. In the GC-ToF-MS analysis, all the selected medicinal plants exhibited the presence of Hexadecanoic acid at varying % areas, while both B. galpinii and C. caffum exhibited the presence of lupeol at % area 2.99 and 3.96, respectively. The compounds identified, particularly the ones with higher % area, may well explain the biological activity observed. Although the selected medicinal plants exhibited a notable biological activity, there is a need to explore the safety profiles of these plants, both in vitro and in vivo.

A fluorescent aptasensor based on gold nanoparticles quenching the fluorescence of rhodamine B to detect acetamiprid

Pesticide residue detection is one of the main safety issues in the utilization of medicinal plants. In this work, a highly selective and sensitive aptasensor for acetamiprid determination was designed. The mechanism of the proposed method is based on the fluorescence resonance energy transfer (FRET) between gold nanoparticles (AuNPs) and rhodamine B (RB). Aptamers protect AuNPs from salt-induced aggregation, which causes fluorescence quenching of RB by the AuNPs via surface energy transfer. In the absence of acetamiprid, AuNPs were coated with aptamers on the surface and dispersed in NaCl solution. At this time, the dispersed AuNPs could perfectly quench the fluorescence intensity of RB. In contrast, in the presence of acetamiprid, aptamers specifically combine with acetamiprid to form a complex. With a high salt concentration, AuNPs would be aggregated without aptamer protection, weakening the RB quenching effect. Therefore, the concentration of acetamiprid could be obtained from the change in fluorescence intensity in the system. A fluorescent sensing method was established with a linear range from 0.1 to 3 μg mL-1, and the LOD was 0.0285 μg mL-1. The recoveries of acetamiprid in traditional Chinese medicine (TCM) samples were 96.23-105.75%. This method has great application value for the detection of acetamiprid in a complex sample matrix.