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Rai S, Rai D. Probing the Electric Field Response of a Water Molecule Confined in Small Carbon Nanocages: A Density Functional Theory Investigation. Chemphyschem 2024; 25:e202400718. [PMID: 39287975 DOI: 10.1002/cphc.202400718] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Revised: 09/16/2024] [Accepted: 09/16/2024] [Indexed: 09/19/2024]
Abstract
We consider a water molecule under tight confinement in the small-sized fullerenes (C28 ${_{28} }$ , C30 ${_{30} }$ , C32 ${_{32} }$ ) within the density functional theory (DFT) calculations with suitable exchange-correlation functionals. Such nanoscopic molecular cages provide an ideal setup to study their characteristic properties not present in the condensed phase. The water molecule entirely loses its feature of typical water when it is confined in small fullerenes of size equal to C30 ${_{30} }$ or smaller, in which the asymmetric O-H stretching vibration occurs at a lower wavenumber than the symmetric stretching. We study the response of the confined water molecule to the applied electric fields in terms of change in geometrical parameters, NMR spin-spin coupling constants, dipole moment, HOMO-LUMO (HL) gap, and vibrational frequency shift. The electric field shielding property of small-sized fullerene cages is explored and found to be strongly correlated with the HL gap. Since the electric field modulates the gap to decrease generally, shielding efficiency varies with field strength, thereby making large fields better shielded than small fields for the small penetration factor at large fields. The results that hold significance for technological applications are discussed.
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Affiliation(s)
- Smita Rai
- Department of Physics, Sikkim University, Samdur, India, 737102
| | - Dhurba Rai
- Department of Physics, Sikkim University, Samdur, India, 737102
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Structure and Vibrational Spectroscopy of C 82 Fullerenol Valent Isomers: An Experimental and Theoretical Joint Study. Molecules 2023; 28:molecules28041569. [PMID: 36838557 PMCID: PMC9965979 DOI: 10.3390/molecules28041569] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Revised: 01/31/2023] [Accepted: 02/04/2023] [Indexed: 02/09/2023] Open
Abstract
Gd@C82OxHy endohedral complexes for advanced biomedical applications (computer tomography, cancer treatment, etc.) were synthesized using high-frequency arc plasma discharge through a mixture of graphite and Gd2O3 oxide. The Gd@C82 endohedral complex was isolated by high-efficiency liquid chromatography and consequently oxidized with the formation of a family of Gd endohedral fullerenols with gross formula Gd@C82O8(OH)20. Fourier-transformed infrared (FTIR) spectroscopy was used to study the structure and spectroscopic properties of the complexes in combination with the DFTB3 electronic structure calculations and infrared spectra simulations. It was shown that the main IR spectral features are formed by a fullerenole C82 cage that allows one to consider the force constants at the DFTB3 level of theory without consideration of gadolinium endohedral ions inside the carbon cage. Based on the comparison of experimental FTIR and theoretical DFTB3 IR spectra, it was found that oxidation of the C82 cage causes the formation of Gd@C82O28H20, with a breakdown of the integrity of the parent C82 cage with the formation of pores between neighboring carbonyl and carboxyl groups. The Gd@C82O6(OOH)2(OH)18 endohedral complex with epoxy, carbonyl and carboxyl groups was considered the most reliable fullerenole structural model.
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Electronic Structure Calculations on Endohedral Complexes of Fullerenes: Reminiscences and Prospects. Molecules 2023; 28:molecules28031384. [PMID: 36771050 PMCID: PMC9920411 DOI: 10.3390/molecules28031384] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 01/15/2023] [Accepted: 01/17/2023] [Indexed: 02/04/2023] Open
Abstract
The history of electronic structure calculations on the endohedral complexes of fullerenes is reviewed. First, the long road to the isolation of new allotropes of carbon that commenced with the seminal organic syntheses involving simple inorganic substrates is discussed. Next, the focus is switched to author's involvement with fullerene research that has led to the in silico discovery of endohedral complexes. The predictions of these pioneering theoretical studies are juxtaposed against the data afforded by subsequent experimental developments. The successes and failures of the old and modern quantum-chemical calculations on endohedral complexes are summarized and their remaining deficiencies requiring further attention are identified.
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Saroj A, Venkatnarayan R, Mishra BK, Panda AN, Narayanasami S. Improved Estimates of Host‐Guest Interaction Energies for Endohedral Fullerenes Containing Rare Gas Atoms, Small Molecules, and Cations. Chemphyschem 2022; 23:e202200413. [DOI: 10.1002/cphc.202200413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 08/18/2022] [Indexed: 11/10/2022]
Affiliation(s)
- Arti Saroj
- IIT BHU: Indian Institute of Technology BHU Varanasi Chemistry 221005 Varanasi INDIA
| | | | | | - Aditya N. Panda
- IIT Guwahati: Indian Institute of Technology Guwahati Chemistry 781039 INDIA
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Kwon E, Matsukawa T, Hoshikawa A, Ishigaki T, Aoyagi S, Kawachi K, Kasama Y. Direct observation of nucleus of lithium in a C60 fullerene cage by neutron diffraction study. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Ghanavati F, Azami S. Steric paths in confined hydrogen molecule inside carbon nanorings and fullerenes. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Yadav P, Rai PK, Mallick S, Kumar P. External Electric Field to Control the Diels-Alder Reactions of Endohedral Fullerene. Phys Chem Chem Phys 2022; 24:11131-11136. [DOI: 10.1039/d2cp01267g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The present work investigates the role of the External Electric Field (EEF) on a Diels-Alder reaction of endohedral fullerene by means of chemical kinetics and quantum chemical calculations. The investigation...
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Ando H, Nakao Y. Quantum states of the endohedral fullerene Li +@C 60 surrounded by anions: energy decomposition analysis of nuclear wave functions. Phys Chem Chem Phys 2021; 23:9785-9803. [PMID: 33908486 DOI: 10.1039/d1cp00056j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Lithium is the lightest metal element. To date, little is known about its quantized nuclear motion in nanoscale porous structures. Endohedral fullerene Li+@C60 is an ideal porous system for studying such a quantized motion. Recent studies suggest that the anions surrounding the C60 cage exterior and a slight cage distortion can alter the potential field in the cage interior and thus the nuclear wave function of Li+. It has yet to be clarified how the electronic state, particularly the flexible π electron cloud of the C60 cage, is associated with (de)localization of the Li+ wave function. Focusing on the [Li+@C60]PF6- crystal, we constructed a local structure model considering the PF6- coordination and the cage distortion. We developed model functions that fit the post-Hartree-Fock potential energy surface for the Li+ motion and its decomposed components, four interaction energy surfaces. The decomposition clarified the origins of the shell-like adsorbent potential and the potential wells therein. The Fourier grid Hamiltonian method allowed us to obtain low-energy Li+ wave functions. The ground state is nearly two-fold degenerate, and its wave functions are mostly localized underneath two C6 rings, near the disordered sites of Li+ in the X-ray crystal structure. By extending the energy decomposition analysis within the clamped-nuclei approximation to incorporate the delocalization of nuclear wave functions, we demonstrated that the ground state is stabilized by the polarization, dispersion, and electrostatic interactions. Beyond the common picture of Li+ moving in a classical electrostatic field, our approach will deepen the understanding of the flexible Li+ wave function confined in a polarizable porous structure by various intermolecular interactions.
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Affiliation(s)
- Hideo Ando
- Faculty of Science, Yamagata University, 1-4-12 Kojirakawa-machi, Yamagata, Yamagata 990-8560, Japan.
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Shahamirian M, Azami SM. Strong intramolecular hydrogen bonding in confined amino acids. J Mol Graph Model 2021; 106:107913. [PMID: 33892298 DOI: 10.1016/j.jmgm.2021.107913] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Revised: 03/26/2021] [Accepted: 03/26/2021] [Indexed: 12/07/2022]
Abstract
Intramolecular hydrogen bonding is evaluated in three different amino acids encapsulated in C60 fullerene in the context of electron density analysis. While conventional intramolecular hydrogen bonding in isolated amino acids are dominated by electrostatic character, it is shown that strong intramolecular hydrogen bonding can be formed in confined amino acids so that in two cases covalent intramolecular hydrogen bonding is appeared in the confined species. Also, results show that zwitterionic amino acids are stable in confined state, where no implicit or explicit solvation is applied. Covalent character for intramolecular hydrogen bonding in amino acids have not yet been reported.
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Affiliation(s)
- M Shahamirian
- Department of Chemistry, Faculty of Science, Sarvestan Branch, Islamic Azad University, Sarvestan, 73451-173, Iran.
| | - S M Azami
- Department of Chemistry, Yasouj University, Yasouj, 75918-74934, Iran
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Berisha A. First principles details into the grafting of aryl radicals onto the free-standing and borophene/Ag(1 1 1) surfaces. Chem Phys 2021. [DOI: 10.1016/j.chemphys.2021.111124] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Insights into the intrinsic interaction between series of C1 molecules and surface of NiO oxygen carriers involved in chemical looping processes. Chin J Chem Eng 2020. [DOI: 10.1016/j.cjche.2020.07.023] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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Alija A, Gashi D, Plakaj R, Omaj A, Thaçi V, Reka A, Avdiaj S, Berisha A. A theoretical and experimental study of the adsorptive removal of hexavalent chromium ions using graphene oxide as an adsorbent. OPEN CHEM 2020. [DOI: 10.1515/chem-2020-0148] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
AbstractThis study is focused on the adsorption of hexavalent chromium ions Cr(vi) using graphene oxide (GO). The GO was prepared by chemical oxidation (Hummers method) of graphite particles. The synthesized GO adsorbent was characterized by Fourier transform infrared spectroscopy and UV-Vis spectroscopy. It was used for the adsorption of Cr(vi) ions. The theoretical calculations based on density functional theory and Monte Carlo calculations were used to explore the preferable adsorption site, interaction type, and adsorption energy of GO toward the Cr(vi) ions. Moreover, the most stable adsorption sites were used to calculate and plot noncovalent interactions. The obtained results are important as they give molecular insights regarding the nature of the interaction between GO surface and the adsorbent Cr(vi) ions. The found adsorption energy of −143.80 kcal/mol is indicative of the high adsorptive tendency of this material. The adsorption capacity value of GO toward these ions is q = 240.361 mg/g.
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Affiliation(s)
- Ardhmeri Alija
- Department of Chemistry, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
| | - Drinisa Gashi
- Department of Chemistry, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
| | - Rilinda Plakaj
- Department of Chemistry, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
| | - Admir Omaj
- Department of Chemistry, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
| | - Veprim Thaçi
- Department of Chemistry, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
| | - Arianit Reka
- Faculty of Natural Sciences and Mathematics, University of Tetovo, Ilinden n.n., 1200 Tetovo, North Macedonia
- NanoAlb—Unit of Albanian Nanoscience and Nanotechnology, 1000 Tirana, Albania
| | - Sefer Avdiaj
- NanoAlb—Unit of Albanian Nanoscience and Nanotechnology, 1000 Tirana, Albania
- Department of Physics, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
| | - Avni Berisha
- Department of Chemistry, FNMS, University of Pristina “Hasan Prishtina”, 10000 Pristina, Republic of Kosovo
- NanoAlb—Unit of Albanian Nanoscience and Nanotechnology, 1000 Tirana, Albania
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