The Road to Practical Application of Cadmium Phytoremediation Using Rice

OsWNK9 regulates cadmium concentration in brown rice by restraining cadmium transport from straw to brown rice

Selecting and breeding rice cultivars that enable strong cadmium (Cd) accumulation in rice straw but low accumulation in brown rice is a promising way to achieve Cd phytoremediation as well as to ensure the food safety of rice. Herein, we isolated a gene OsWNK9 from the quantitative trait locus associated with reducing Cd translocation from rice straw to brown rice and decreasing the Cd concentration in brown rice (BRCdC). Continuous strong expression of OsWNK9 was observed in nodes and internode and was induced after Cd supply. OsWNK9 was localized in the rice cell nucleus and participated in the regulation of Cd transport in yeast. Two independent oswnk9 rice mutants were generated via CRISPR/Cas9 gene-editing and showed significantly higher BRCdC than that of the wild type (WT). The BRCdC of knockout oswnk9 mutants was 0.227 mg kg-1and 0.238 mg kg-1, increased by 14 % and 19 % compared with that of the WT due to the lower Cd allocation in the basal stem, internode, and node III, which was unrelated to Cd uptake. Interestingly, OsWNK9 could promote iron (Fe) accumulation in rice under Cd-contaminated conditions, suggesting that OsWNK9 is an ideal gene for Cd phytoremediation and Fe biofortification in rice to support safe food production.

Phytomanagement of trace element polluted fields with aromatic plants: supporting circular bio-economies

Trace elements pollution of soils became a global concern because of their persistence in the environment which can lead to accumulation in food chains up to toxic levels. At the same time, there is a shortage of arable land for growing food, fodder and industrial crops, which highlights the need for remediation/use of polluted land. Restoration of degraded lands has been included as a vital component of UN Sustainable Development Goals (SDGs). We summarize various sources of entry of important trace elements in the environment, available biological reclamation and management strategies and their limitations. Recent advances in phytomanagement approaches using aromatic crops to obtain economically valuable products such as essential oils and revalorize such polluted areas are reviewed. The worldwide application of this strategy in the last 10 years is illustrated through a choropleth map. Finally, the emerging concept of phytomanagement as a restorative and regenerative circular bio-economy is also discussed.

A rice-chicory rotation pattern ensures safe grain production and phytoremediation of cadmium-contaminated paddy fields: A four-year field experiment in southern China

Cadmium (Cd) contamination in paddy systems is a serious problem, and a strategy must be devised that ensures safe grain production and rapid remediation of soil Cd contamination. To investigate the remediation potential of crop rotation and its effect on Cd accumulation in rice, a four-year (seven-season) rice-chicory rotation field trial was conducted on a moderately acidic Cd-contaminated paddy soil. Rice was planted in summers, followed by straw removal, and chicory, a Cd-enrichment plant, was planted during winter fallows. Rotation effects were compared with those with rice only (control). Rice yields between the rotation and control were not significantly different, whereas Cd concentrations in rice tissues decreased in the rotation. Cd concentration in brown rice of the low-Cd variety decreased to less than 0.2 mg/kg (national food safety standard) from the third season onward, whereas in the high-Cd variety, it decreased from 0.43 mg/kg in the first season to 0.24 mg/kg in the fourth season. The highest Cd concentration in chicory aboveground parts was 24.47 mg/kg, with an enrichment factor of 27.81. Chicory had high regenerative capacity and was repeatedly harvested for biomass in multiple mowings, with average aboveground biomass over 2000 kg/ha in a single mowing. Theoretical phytoextraction efficiency (TPE) of one rice season with straw removal was 0.84%-2.44%, whereas the highest TPE of one chicory season reached 8.07%. The seven seasons of rice-chicory rotation extracted up to 407 g/ha Cd from soil with a TPE exceeding 20%. Therefore, rice-chicory rotation and straw removal can effectively reduce Cd accumulation in subsequent rice crops, without interrupting production and simultaneously rapidly remediating Cd-contaminated soil. Thus, the production potential of light to moderately Cd-contaminated paddy fields can be realized with crop rotation.

Hydrogen peroxide mediates cadmium accumulation in the root of a high cadmium-accumulating rice (Oryza sativa L.) line

Hydrogen peroxide (H₂O₂) is a vital signaling molecule in response to cadmium (Cd) stress in plants. However, the role of H₂O₂ on Cd accumulation in root of different Cd-accumulating rice lines remains unclear. Exogenous H₂O₂ and 4-hydroxy-TEMPO (H₂O₂ scavenger) were applied to investigate the physiological and molecular mechanisms of H₂O₂ on Cd accumulation in the root of a high Cd-accumulating rice line Lu527-8 through hydroponic experiments. Interestingly, it was found Cd concentration in the root of Lu527-8 increased significantly when exposed to exogenous H₂O₂, while reduced significantly when exposed to 4-hydroxy-TEMPO under Cd stress, proving the role of H₂O₂ in regulating Cd accumulation in Lu527-8. Lu527-8 showed more Cd and H₂O₂ accumulation in the roots, along with more Cd accumulation in cell wall and soluble fraction, than the normal rice line Lu527-4. In particular, more pectin accumulation, especially low demethylated pectin, was observed in the root of Lu527-8 when exposed to exogenous H₂O₂ under Cd stress, resulting in more negative functional groups with greater capacity to binding Cd in the root cell wall of Lu527-8. It indicated that H₂O₂-induced cell wall modification and vacuolar compartmentalization contributes greatly to more Cd accumulation in the root of the high Cd-accumulating rice line.

Challenges and opportunities for improving the environmental quality of cadmium-contaminated soil in China

Considering the soil cadmium pollution problem, the Chinese government proposed to estimate the costs and practicality "to completely improve the soil quality by the middle of this century". This study analyzed the challenges in achieving this goal using biophysical data from 10 typical demonstration soil phytoextraction projects. The current annual phytoextraction efficiency was determined as 14.8-490 g ha^-1 a^-1 at 319 RMB g^-1 cadmium. A total of 798 billion RMB and 5 years were required for remediation of cadmium contamination, which was 22 times the investment in soil remediation during 2016-2022. The break-even point of phytoextraction projects was 29 years. The heavy financial burden was considered the primary challenge in improving the environmental quality of such soil. The cost could be reduced by 5.5-35.3 % through optimization measures such as resourcefulness of hyperaccumulator harvests, large-scale breeding, and mechanized management. The break-even point could be shortened to 6-15 years by intercropping/rotating crops, contributing to the goal. Active exploration of phytoextraction efficiency-more efficient accumulators, optimized agronomic measures-is worth practicing.

A Study on the Behavior of Cadmium in the Soil Solution-Plant System by the Lysimeter Method Using the 109Cd Radioactive Tracer

In soils, cadmium (Cd) and its compounds, originating from industrial activities, differ both in mobility as well as in their ability to permeate the soil solution from naturally occurring cadmium compounds (native Cd). Therefore, the determination of the parameters of cadmium mobility in soils and its accumulation by plants in the soil-soil solution-plant system is very important from both scientific and practical viewpoints. ¹⁰⁹Cd was used as a radioactive tracer to study the processes of the transition of Cd into the aqueous phase and its uptake by plants over the course of a vegetative lysimeter experiment. Using sequential extraction according to the Tessier-Förstner procedure and modified BCR schemes, certain patterns were determined in the distribution of Cd/¹⁰⁹Cd among their forms in various compounds in the soil, along with the coefficients of the enrichment of native stable Cd with radioactive ¹⁰⁹Cd. It was shown that the labile pool of stable Cd compounds (29%) was significantly smaller than that of radioactive ¹⁰⁹Cd (69%). The key parameters characterizing the migration capacity of Cd in the soil-soil solution-plant system were determined. It was found that the distribution coefficient of native Cd between the soil and the quasi-equilibrium lysimeter solution exceeded the similar value for the ¹⁰⁹Cd radionuclide by 2.2 times, and the concentration coefficients of Cd and ¹⁰⁹Cd in the barley roots were 9 times higher than in its vegetative parts. During the experiment, the average removal of Cd (¹⁰⁹Cd) from the soil by each barley plant was insignificant: 0.002 (0.004)%. Based on the results of ¹³C nuclear magnetic resonance (NMR) spectroscopy of a lyophilized sample of the high-molecular-weight dissolved organic matter (HMWDOM) of the soil solution, its components were determined. It transpired that the isolated lyophilized samples of HMWDOM with different molecular weights had an identical structural and functional composition. The selective sorption parameters of the HMWDOM and humic acid (HA) with respect to Cd²⁺ ions were determined by the isotope dilution method.

Genetic Regulation Mechanism of Cadmium Accumulation and Its Utilization in Rice Breeding

Cadmium (Cd) is a heavy metal whose pollution in rice fields leads to varying degrees of Cd accumulation in rice. Furthermore, the long-term consumption of Cd-contaminated rice is harmful to human health. Therefore, it is of great theoretical significance and application value to clarify the genetic regulation mechanism of Cd accumulation in rice and cultivate rice varieties with low Cd accumulation for the safe use of Cd-contaminated soils. This review summarizes the effects of Cd on rice growth, yield, and quality; the physiological and molecular mechanisms of Cd absorption in the roots, loading, and transport of Cd in the xylem, the distribution of Cd in nodes, redistribution of Cd in leaves, and accumulation of Cd in the grains; the regulation mechanism of the Cd stress response; and the breeding of rice with low Cd accumulation. Future directions on the genetic regulation of Cd in rice and application are also discussed. This review provides a theoretical basis for studies exploring the genetic regulation of Cd stress in rice. It also offers a basis for formulating effective strategies to reduce the Cd content in rice.

Interplanting of rice cultivars with high and low Cd accumulation can achieve the goal of "repairing while producing" in Cd-contaminated soil

Interplanting has been highlighted as a promising, cost-effective, and environmentally friendly solution for the remediation of contaminated soil. In this study, field experiments were conducted to study growth and cadmium (Cd) uptake in monoculture and interplanting systems with rice varieties Changliangyou 772 (C-772) and Changxianggu (Cho-ko-koku). And a pot culture experiment was conducted to investigate the response of the rhizosphere microecology of these two rice varieties. In the interplanting system of the field study, the Cd concentration in the grains of C-772 was significantly reduced (P < 0.05) from 0.30 mg kg^-1 to 0.16 mg kg^-1 and reached the national food safety standard of China (GB2762-2017, 0.20 mg kg^-1), whereas the bioconcentration amount (BCA) per plant of Cd in Cho-ko-koku was significantly increased by 68.18 % (P < 0.05). The land equivalent ratio (LER) and Cd metal removal equivalent ratio (MRER) of the interplanting system were 1.03 and 1.05, illustrating that the interplanting system was superior in terms of yield and Cd elimination. In the pot experiment, the interplanting system significantly (P < 0.05) reduced the iron plaque content on the root surface and organic acids content in the rhizosphere environment of C-772 while markedly increasing those levels in Cho-ko-koku. At ripening stage, the interplanting system significantly decreased the rhizosphere available Cd concentration of C-772 from 0.38 mg kg^-1 to 0.22 mg kg^-1 (P < 0.05), while significantly increased the rhizosphere available Cd concentration of Cho-ko-koku from 0.27 mg kg^-1 to 0.32 mg kg^-1 (P < 0.05). Thus, Cd uptake of C-772 and Cho-ko-koku showed apparent differences. Oxalic and tartaric acid were identified as the most crucial factors affecting Cd uptake by C-772 and Cho-ko-koku in the interplanting system, respectively. In summary, this interplanting system is a promising planting pattern that can simultaneously improve land use efficiency and alleviate Cd pollution.

Phytoremediation of DEHP and heavy metals co-contaminated soil by rice assisted with a PGPR consortium: Insights into the regulation of ion homeostasis, improvement of photosynthesis and enrichment of beneficial bacteria in rhizosphere soil

The coexistence of di (2-ethylhexyl) phthalate (DEHP), Cd, and Zn poses a serious challenge to soil ecosystems. This study aimed to evaluate the phytoremediation potential of rice assisted with a plant growth promoting rhizobacteria (PGPR) consortium for the remediation of DEHP, Cd, and Zn co-contaminated soil. The consortium consisted of four bacterial strains, all of which exhibited Cd-Zn resistance and DEHP degradability. The results showed that the rice assisted by the bacterial consortium dissipated 86.1% DEHP while removing 76.0% Cd²⁺ and 92.2% Zn²⁺ from soil within 30 d. The presence of the PGPR consortium promoted plant growth and improved soil enzymatic activity, which may have helped enhance the removal of DEHP and heavy metals from the soil. Moreover, the application of the consortium modified the bacterial community and increased the relative abundance of bacteria related to DEHP degradation (Sphingomonas, Xanthobacteraceae), heavy metal immobilization (Massilia), and soil nutrient cycling (Nitrospira, Vicinamibacterales), which promoted plant growth and the removal of DEHP and heavy metals from soil. Notably, the DEHP and heavy metal contents in rice decreased substantially during the phytoremediation process. Therefore, the PGPR consortium could be beneficial for enhancing the removal of DEHP and heavy metals from the soil, without inducing the accumulation of these pollutants in rice. In general, this study confirmed that the combined use of rice and the PGPR consortium could remedy DEHP and heavy metal co-contaminated soil economically and ecologically without simultaneously posing risks for rice consumption.

A metal chaperone OsHIPP16 detoxifies cadmium by repressing its accumulation in rice crops

Cadmium (Cd) is an environmentally polluted toxic heavy metal and seriously risks food safety and human health through food chain. Mining genetic potentials of plants is a crucial step for limiting Cd accumulation in rice crops and improving environmental quality. This study characterized a novel locus in rice genome encoding a Cd-binding protein named OsHIPP16, which resides in the nucleus and near plasma membrane. OsHIPP16 was strongly induced by Cd stress. Histochemical analysis with pHIPP16::GUS reveals that OsHIPP16 is primarily expressed in root and leaf vascular tissues. Expression of OsHIPP16 in the yeast mutant strain ycf1 sensitive to Cd conferred cellular tolerance. Transgenic rice overexpressing OsHIPP16 (OE) improved rice growth with increased plant height, biomass, and chlorophyll content but with a lower degree of oxidative injury and Cd accumulation, whereas knocking out OsHIPP16 by CRISPR-Cas9 compromised the growth and physiological response. A lifelong trial with Cd-polluted soil shows that the OE plants accumulated much less Cd, particularly in brown rice where the Cd concentrations declined by 11.76-34.64%. Conversely, the knockout oshipp16 mutants had higher levels of Cd with the concentration in leaves being increased by 26.36-35.23% over the wild-type. These results suggest that adequate expression of OsHIPP16 would profoundly contribute to Cd detoxification by regulating Cd accumulation in rice, suggesting that both OE and oshipp16 mutant plants have great potentials for restricting Cd acquisition in the rice crop and phytoremediation of Cd-contaminated wetland soils.

Improvement of the Cd and Zn phytoremediation efficiency of rice (Oryza sativa) through the inoculation of a metal-resistant PGPR strain

Cadmium (Cd) and zinc (Zn) in contaminated soil inhibit rice yield and produce toxic effects on human body through rice accumulation. Plant growth promoting rhizobacteria (PGPR) assisted phytoremediation is an effective ecological measure to improve the remediation efficiency of heavy metal contaminated soil. The purpose of this study was to investigate the efficiency of the combination of rice and Cd/Zn-tolerant PGPR strain Bacillus sp. ZC3-2-1 for the remediation of Cd-Zn contaminated soil. Moreover, the effects of inoculations on rhizosphere bacterial communities and ion homeostasis of rice under Cd-Zn exposure will also be explored. The results showed that compared with the treatment without inoculation, ZC3-2-1 decreased the bioavailable Cd and Zn concentrations in soil by 39.3% and 32.0%, respectively, and increase the phytoextraction of Cd²⁺ and Zn²⁺ by rice to 48.2% and 8.0%, respectively. This inoculation process significantly increased the rice biomass, resulting that the contents of Cd²⁺ and Zn²⁺ per biomass unit of rice didn't change significantly. This fact meant that ZC3-2-1 could improve the phytoremediation efficiency of Cd-Zn contaminated soil by promoting the phytoextraction and immobilization of the metal, while might not affect the crop food safety. Besides, through regulation of the Na⁺ and Mg²⁺ concentration in rice, ZC3-2-1 played a positive role in maintaining ion homeostasis which was disrupted by Zn or Cd. Moreover, ZC3-2-1 could modulate the beneficial bacterial communities in rice rhizosphere soil, and then enhanced Cd-Zn immobilization and enzyme activities in soil, leading to the enhancement of rice growth and phytoremediation efficiency. Above all, this study provided novel insights into developing an efficient phytoremediation system and safe production of rice in Cd-Zn contaminated soil with the application of Bacillus sp. ZC3-2-1, as well as advance our understanding of the principles of rhizosphere bacterial community assemble and maintaining ion homeostasis in rice during this phytoremediation process.

QTL Pyramiding and Its Use in Breeding for Increasing the Phytoextraction Efficiency of Soil Cd via High-Cd-Accumulating Rice

Phytoextraction by high-Cd-accumulating rice lacking a functional OsHMA3 allele is promising for Cd removal from paddy soils. To increase rice Cd extraction efficiency, we developed a new high-Cd variety, TJN25-11. For this, we pyramided a nonfunctional OsHMA3 allele from a high-Cd variety, Jarjan, and two QTLs for increased shoot Cd concentrations, which were discovered in a mapping population derived from a high-Cd variety, Nepal 555, and a low-Cd variety, Tachisugata. In two Cd-contaminated paddy fields under drained aerobic soil conditions, TJN25-11 presented significantly higher Cd concentrations in the straw and panicles than the OsHMA3-deficient varieties TJTT8 and Cho-ko-koku. Among the varieties, TJN25-11 had a relatively high shoot biomass, resulting in the highest Cd accumulation in the shoots. The soil Cd decreased by approximately 20% after TJN25-11 growth. The amount of Cd that accumulated in the TJN25-11 aerial parts was much greater than the amount of Cd that decreased in the topsoil, suggesting that Cd was absorbed from deeper soil layers. Thus, we revealed the effects of QTL pyramiding on shoot Cd accumulation and Cd phytoextraction efficiency. Since TJN25-11 has favorable agronomic traits for compatibility with Japanese cultivation systems, this variety could be useful for Cd phytoextraction in Cd-contaminated paddy fields.

The E3 Ubiquitin Ligase Gene Sl1 Is Critical for Cadmium Tolerance in Solanum lycopersicum L

Heavy metal cadmium (Cd) at high concentrations severely disturbs plant growth and development. The E3 ubiquitin ligase involved in protein degradation is critical for plant tolerance to abiotic stress, but the role of E3 ubiquitin ligases in Cd tolerance is largely unknown in tomato. Here, we characterized an E3 ubiquitin ligase gene Sl1, which was highly expressed in roots under Cd stress in our previous study. The subcellular localization of Sl1 revealed that it was located in plasma membranes. In vitro ubiquitination assays confirmed that Sl1 had E3 ubiquitin ligase activity. Knockout of the Sl1 gene by CRISPR/Cas9 genome editing technology reduced while its overexpression increased Cd tolerance as reflected by the changes in the actual quantum efficiency of PSII photochemistry (Φ_PSII) and hydrogen peroxide (H₂O₂) accumulation. Cd-induced increased activities of antioxidant enzymes including superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (APX), and glutathione reductase (GR) were compromised in sl1 mutants but were enhanced in Sl1 overexpressing lines. Furthermore, the content of Cd in both shoots and roots increased in sl1 mutants while reduced in Sl1 overexpressing plants. Gene expression assays revealed that Sl1 regulated the transcript levels of heavy metal transport-related genes to inhibit Cd accumulation. These findings demonstrate that Sl1 plays a critical role in regulating Cd tolerance by relieving oxidative stress and resisting heavy metal transportation in tomato. The study provides a new understanding of the mechanism of plant tolerance to heavy metal stress.

Phytoremediation of Cadmium Polluted Soils: Current Status and Approaches for Enhancing

Cadmium (Cd) is a heavy metal present in atmosphere, rocks, sediments, and soils without a known role in plants. It is relatively mobile and can easily enter from soil into groundwater and contaminate the food chain. Its presence in food in excess amounts may cause severe conditions in humans, therefore prevention of cadmium entering the food chain and its removal from contaminated soils are important steps in preserving public health. In the last several years, several approaches for Cd remediation have been proposed, such as the use of soil amendments or biological systems for reduction of Cd contamination. One of the approaches is phytoremediation, which involves the use of plants for soil clean-up. In this review we summarized current data on the use of different plants in phytoremediation of Cd as well as information about different approaches which have been used to enhance phytoremediation. This includes data on the increasing metal bioavailability in the soil, plant biomass, and plant accumulation capacity as well as seed priming as a promising novel approach for phytoremediation enhancing.