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Habib MA, Azam MG, Haque MA, Hassan L, Khatun MS, Nayak S, Abdullah HM, Ullah R, Ali EA, Hossain N, Ercisli S, Sarker U. Climate-smart rice (Oryza sativa L.) genotypes identification using stability analysis, multi-trait selection index, and genotype-environment interaction at different irrigation regimes with adaptation to universal warming. Sci Rep 2024; 14:13836. [PMID: 38879711 PMCID: PMC11180187 DOI: 10.1038/s41598-024-64808-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Accepted: 06/13/2024] [Indexed: 06/19/2024] Open
Abstract
Climate change has brought an alarming situation in the scarcity of fresh water for irrigation due to the present global water crisis, climate variability, drought, increasing demands of water from the industrial sectors, and contamination of water resources. Accurately evaluating the potential of future rice genotypes in large-scale, multi-environment experiments may be challenging. A key component of the accurate assessment is the examination of stability in growth contexts and genotype-environment interaction. Using a split-plot design with three replications, the study was carried out in nine locations with five genotypes under continuous flooding (CF) and alternate wet and dry (AWD) conditions. Utilizing the web-based warehouse inventory search tool (WIST), the water status was determined. To evaluate yield performance for stability and adaptability, AMMI and GGE biplots were used. The genotypes clearly reacted inversely to the various environments, and substantial interactions were identified. Out of all the environments, G3 (BRRI dhan29) had the greatest grain production, whereas G2 (Binadhan-8) had the lowest. The range between the greatest and lowest mean values of rice grain output (4.95 to 4.62 t ha-1) was consistent across five distinct rice genotypes. The genotype means varied from 5.03 to 4.73 t ha-1 depending on the environment. In AWD, all genotypes out performed in the CF system. With just a little interaction effect, the score was almost zero for several genotypes (E1, E2, E6, and E7 for the AWD technique, and E5, E6, E8, and E9 for the CF method) because they performed better in particular settings. The GGE biplot provided more evidence in support of the AMMI study results. The study's findings made it clear that the AMMI model provides a substantial amount of information when evaluating varietal performance across many environments. Out of the five accessions that were analyzed, one was found to be top-ranking by the multi-trait genotype ideotype distance index, meaning that it may be investigated for validation stability measures. The study's findings provide helpful information on the variety selection for the settings in which BRRI dhan47 and BRRI dhan29, respectively, performed effectively in AWD and CF systems. Plant breeders might use this knowledge to choose newer kinds and to design breeding initiatives. In conclusion, intermittent irrigation could be an effective adaptation technique for simultaneously saving water and mitigating GHG while maintaining high rice grain yields in rice cultivation systems.
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Affiliation(s)
- Muhammad Ashraful Habib
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
- Rice Breeding Innovation Platform, International Rice Research Institute, 4031, Los Banos, Laguna, Philippines
| | - Mohammad Golam Azam
- Pulses Research Centre, Bangladesh Agricultural Research Institute, Ishurdi, Pabna, 6620, Bangladesh
| | - Md Ashraful Haque
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Lutful Hassan
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Mst Suhana Khatun
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Swati Nayak
- Rice Breeding Innovation Platform, International Rice Research Institute, 4031, Los Banos, Laguna, Philippines
| | - Hasan Muhammad Abdullah
- Department of Remote Sensing and GIS, Faculty of Forestry and Environment, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Riaz Ullah
- Department of Pharmacognosy, College of Pharmacy, King Saud University, 11451, Riyadh, Saudi Arabia
| | - Essam A Ali
- Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, 11451, Riyadh, Saudi Arabia
| | - Nazmul Hossain
- Department of Agronomy, Iowa State University, Ames, IA, 50010, USA
| | - Sezai Ercisli
- Department of Horticulture, Faculty of Agriculture, Ataturk University, 25240, Erzurum, , Turkey
| | - Umakanta Sarker
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh.
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Mondal S, Pradhan P, Das B, Kumar D, Paramanik B, Yonzone R, Barman R, Saha D, Karforma J, Basak A, Dey P, Seleiman MF. Genetic characterization and diversity analysis of indigenous aromatic rice. Heliyon 2024; 10:e31232. [PMID: 38813207 PMCID: PMC11133840 DOI: 10.1016/j.heliyon.2024.e31232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2023] [Revised: 05/08/2024] [Accepted: 05/13/2024] [Indexed: 05/31/2024] Open
Abstract
Gangetic old alluvial zone in India has conserved many locally adapted aromatic rice landraces. In order to determine the extent of genetic divergence of ten morphological characters, the study was conducted to examine forty-eight aromatic rice genotypes for six Kharif seasons (2016-2021) at the Instructional Farm of Regional Research Station (Old Alluvial Zone), Uttar Banga Krishi Viswavidyalaya, Majhian, West Bengal, India. The experiment was laid out in Randomized Complete Block Design (RCBD) with three replications. A considerable degree of variation was noted for all the traits being investigated. It was found that the total number of tillers per plant, panicle numbers per plant, number of grains per panicle, fertility percentage, test weight, and grain length/breadth ratio had significantly positive correlated with seed yield per plant. Based on D2 analysis values, all the genotypes were grouped into six clusters. Cluster III (Tulaipanji, Patnai, Basmati 1121, Jugal, and Bahurupi) and Cluster VI (Kanakchur), containing genotypes were found most divergent with maximum inter-cluster distance (6941.51). According to the cluster means, Cluster II had the largest intra-cluster distance (1937.52), and important attributes including test weight, number of grains per panicle, seed yield per plant, and fertility percentage made remarkably significant contributions to this cluster. In terms of principal component analysis, maximum variability was found in PC1 (23.88 %), with high positive loading values for tillers per plant (0.459), panicle number per plant (0.441), seed yield per plant (0.408), fertility percentage (0.364), test weight (0.264), and grain length/breadth (L/B) ratio (0.263). On the basis of biplot analysis, four genotypes, namely Shakbhati, Sugandhi, Bahurupi and Kanakchur, were identified as the most divergent types for the yield-attributing traits of aromatic rice. The diverse genotypes could be used as potential donors in future breeding programmes.
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Affiliation(s)
- Sourav Mondal
- Department of Genetics and Plant Breeding, Uttar Banga Krishi Viswavidyalaya, Pundibari, 736165, Coochbehar, West Bengal, India
| | - Prajjwal Pradhan
- Department of Genetics and Plant Breeding, Uttar Banga Krishi Viswavidyalaya, Pundibari, 736165, Coochbehar, West Bengal, India
| | - Bimal Das
- College of Agriculture (Extended Campus), Uttar Banga Krishi Viswavidyalaya, Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Deepak Kumar
- College of Agriculture (Extended Campus), Uttar Banga Krishi Viswavidyalaya, Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Bappa Paramanik
- Dakshin Dinajpur Krishi Vigyan Kendra, Uttar Banga Krishi Viswavidyalaya, Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Rakesh Yonzone
- College of Agriculture (Extended Campus), Uttar Banga Krishi Viswavidyalaya, Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Ratul Barman
- Regional Research Station (OAZ), Uttar Banga Krishi Viswavidyalaya Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Debraj Saha
- Dakshin Dinajpur Krishi Vigyan Kendra, Uttar Banga Krishi Viswavidyalaya, Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Jyotirmay Karforma
- College of Agriculture (Extended Campus), Uttar Banga Krishi Viswavidyalaya, Majhian, 733133, Dakshin Dinajpur, West Bengal, India
- Regional Research Station (OAZ), Uttar Banga Krishi Viswavidyalaya Majhian, 733133, Dakshin Dinajpur, West Bengal, India
| | - Achyuta Basak
- Department of Genetics and Plant Breeding, Uttar Banga Krishi Viswavidyalaya, Pundibari, 736165, Coochbehar, West Bengal, India
| | - Prithwiraj Dey
- Agricultural & Food Engineering Department, Indian Institute of Technology Kharagpur, West Bengal, India
| | - Mahmoud F. Seleiman
- Department of Plant Production, College of Food and Agriculture Sciences, King Saud University, Saudi Arabia
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Sarker U, Oba S, Ullah R, Bari A, Ercisli S, Skrovankova S, Adamkova A, Zvonkova M, Mlcek J. Nutritional and bioactive properties and antioxidant potential of Amaranthus tricolor, A. lividus, A viridis, and A. spinosus leafy vegetables. Heliyon 2024; 10:e30453. [PMID: 38720726 PMCID: PMC11077029 DOI: 10.1016/j.heliyon.2024.e30453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Revised: 04/26/2024] [Accepted: 04/26/2024] [Indexed: 05/12/2024] Open
Abstract
Climate change results in continuous warming of the planet, threatening sustainable crop production around the world. Amaranth is an abiotic stress-tolerant, climate-resilient, C4 leafy orphan vegetable that has grown rapidly with great divergence and potential usage. The C4 photosynthesis allows amaranth to be grown as a sustainable future food crop across the world. Most amaranth species grow as weeds in many parts of the world, however, a few amaranth species can be also found in cultivated form. Weed species can be used as a folk medicine to relieve pain or reduce fever thanks to their antipyretic and analgesic properties. In this study, nutritional value, bioactive pigments, bioactive compounds content, and radical scavenging potential (RSP) of four weedy and cultivated (WC) amaranth species were evaluated. The highest dry matter, carbohydrate content, ash, content of iron, copper, sodium, boron, molybdenum, zinc, β-carotene and carotenoids, vitamin C, total polyphenols (TP), RSP (DPPH), and RSP (ABTS+) was determined in Amaranthus viridis (AV). On the other hand, A. spinosus (AS) was found to have the highest content of protein, fat, dietary fiber, manganese, molybdenum, and total flavonoids (TF). In A. tricolor (AT) species the highest total chlorophyll, chlorophyll a and b, betaxanthin, betacyanin, and betalain content was determined. A. lividus (AL) was evaluated as the highest source of energy. AV and AT accessions are underutilized but promising vegetables due to their bioactive phytochemicals and antioxidants.
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Affiliation(s)
- Umakanta Sarker
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur-1706, Bangladesh
| | - Shinya Oba
- Laboratory of Field Science, Faculty of Applied Biological Sciences, Gifu University, Yanagido 1-1, Gifu 501-1193, Japan
| | - Riaz Ullah
- Department of Pharmacognosy, College of Pharmacy, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia
| | - Ahmed Bari
- Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Sezai Ercisli
- Department of Horticulture, Faculty of Agriculture, Ataturk University, 25240 Erzurum, Turkiye
| | - Sona Skrovankova
- Department of Food Analysis and Chemistry, Faculty of Technology, Tomas Bata University in Zlin, Vavreckova 5669, 760 01 Zlin, Czech Republic
| | - Anna Adamkova
- Department of Food Analysis and Chemistry, Faculty of Technology, Tomas Bata University in Zlin, Vavreckova 5669, 760 01 Zlin, Czech Republic
| | - Magdalena Zvonkova
- Department of Food Analysis and Chemistry, Faculty of Technology, Tomas Bata University in Zlin, Vavreckova 5669, 760 01 Zlin, Czech Republic
| | - Jiri Mlcek
- Department of Food Analysis and Chemistry, Faculty of Technology, Tomas Bata University in Zlin, Vavreckova 5669, 760 01 Zlin, Czech Republic
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Islam MR, Sarker U, Azam MG, Hossain J, Alam MA, Ullah R, Bari A, Hossain N, El Sabagh A, Islam MS. Potassium augments growth, yield, nutrient content, and drought tolerance in mung bean (Vigna radiata L. Wilczek.). Sci Rep 2024; 14:9378. [PMID: 38654029 PMCID: PMC11039697 DOI: 10.1038/s41598-024-60129-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 04/19/2024] [Indexed: 04/25/2024] Open
Abstract
Uneven rainfall and high temperature cause drought in tropical and subtropical regions which is a major challenge to cultivating summer mung bean. Potassium (K), a major essential nutrient of plants can alleviate water stress (WS) tolerance in plants. A field trial was executed under a rainout shelter with additional K fertilization including recommended K fertilizer (RKF) for relieving the harmful impact of drought in response to water use efficiency (WUE), growth, yield attributes, nutrient content, and yield of mung bean at the Regional Agricultural Research Station, BARI, Ishwardi, Pabna in two successive summer season of 2018 and 2019. Drought-tolerant genotype BMX-08010-2 (G1) and drought-susceptible cultivar BARI Mung-1 (G2) were grown by applying seven K fertilizer levels (KL) using a split-plot design with three replications, where mung bean genotypes were allotted in the main plots, and KL were assigned randomly in the sub-plots. A considerable variation was observed in the measured variables. Depending on the different applied KL and seed yield of mung bean, the water use efficiency (WUE) varied from 4.73 to 8.14 kg ha-1 mm-1. The treatment applying 125% more K with RKF (KL7) under WS gave the maximum WUE (8.14 kg ha-1 mm-1) obtaining a seed yield of 1093.60 kg ha-1. The treatment receiving only RKF under WS (KL2) provided the minimum WUE (4.73 kg ha-1 mm-1) attaining a seed yield of 825.17 kg ha-1. Results showed that various characteristics including nutrients (N, P, K, and S) content in stover and seed, total dry matter (TDM) in different growth stages, leaf area index (LAI), crop growth rate (CGR), root volume (RV), root density (RD), plant height, pod plant-1, pod length, seeds pod-1, seed weight, and seed yield in all pickings increased with increasing K levels, particularly noted with KL7. The highest grain yield (32.52%) was also obtained from KL7 compared to lower K with RKF. Overall, yield varied from 1410.37 kg ha-1 using 281 mm water (KL1; well-watered condition with RKF) to 825.17 kg ha-1 using 175 mm water (KL2). The results exhibited that the application of additional K improves the performance of all traits under WS conditions. Therefore, mung beans cultivating under WS requires additional K to diminish the negative effect of drought, and adequate use of K contributes to accomplishing sustainable productivity.
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Affiliation(s)
- Mohammad Rafiqul Islam
- Agronomy Division, Regional Agricultural Research Station, Bangladesh Agricultural Research Institute (BARI), Ishwardi, Pabna, 6620, Bangladesh
| | - Umakanta Sarker
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh.
| | | | - Jamil Hossain
- Pulses Research Centre, BARI, Ishwardi, Pabna, 6620, Bangladesh
| | | | - Riaz Ullah
- Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Ahmed Bari
- Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Nazmul Hossain
- Department of Agronomy, Iowa State University, Ames, IA, 50010, USA
| | - Ayman El Sabagh
- Department of Agronomy, Faculty of Agriculture, Kafrelsheikh University, Kafrelsheikh, 33156, Egypt
| | - Mohammad Sohidul Islam
- Department of Agronomy, Hajee Mohammad Danesh Science and Technology University, Dinajpur, Bangladesh
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Zhang Y, Chen J, Gao Z, Wang H, Liang D, Guo Q, Zhang X, Fan X, Wu Y, Liu Q. Identification of heterosis and combining ability in the hybrids of male sterile and restorer sorghum [Sorghum bicolor (L.) Moench] lines. PLoS One 2024; 19:e0296416. [PMID: 38166022 PMCID: PMC10760902 DOI: 10.1371/journal.pone.0296416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Accepted: 12/12/2023] [Indexed: 01/04/2024] Open
Abstract
In sorghum [Sorghum bicolor (L.) Moench], combining ability and heterosis analysis are commonly used to evaluate superior parental lines and to screen for strongly heterotic hybrids, which helps in sorghum variety selection and breeding. In this context, combining ability and heterosis analysis were assessed using 14 restorer lines and seven cytoplasmic male sterile (CMS) lines in 2019 and 2020. The analysis of variance of all cross combinations had highly significant differences for all characters studied, which indicated a wide variation across the parents, lines, testers, and crosses. Combining ability analysis showed that the general combining ability (GCA) and specific combining ability (SCA) of the different parents were differed significantly among different traits. Most combinations with high SCA also showed high GCA in their parent lines. The heritability in the narrow sense of grain weight per panicle and grain yield was relatively low, indicating that the ability of these traits to be directly inherited by offspring was weak, that they were greatly affected by the environment. The better-parent heterosis for plant height, grain weight per panicle, panicle length, and 1000-grain weight was consistent with the order of mid-parent heterosis from strong to weak. The GCA effects of two lines 10480A, 3765A and three testers 0-30R, R111, and JY15R were significant for the majority of the agronomic traits including grain yield and might be used for improving the yield of grains in sorghum as parents of excellent specific combining ability. Seven strongly heterotic F1 hybrids were screened; of these, hybrids 3765A × R111, 1102A × L2R, and 3765A × JY15R showed significant increases in seed iristectorigenin A content and will feature into the creation of new sorghum varieties rich in iristectorigenin A.
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Affiliation(s)
- Yizhong Zhang
- College of Agronomy, Shanxi Agricultural University, Taigu, Shanxi, People’s Republic of China
- Sorghum Research Institute, Shanxi Key Laboratory of Sorghum Genetic and Germplasm Innovation, Shanxi Agricultural University, Yuci, Shanxi, People’s Republic of China
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Jing Chen
- College of Agronomy, Shanxi Agricultural University, Taigu, Shanxi, People’s Republic of China
| | - Zhenfeng Gao
- College of Food Science and Engineering, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Huiyan Wang
- Sorghum Research Institute, Shanxi Key Laboratory of Sorghum Genetic and Germplasm Innovation, Shanxi Agricultural University, Yuci, Shanxi, People’s Republic of China
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Du Liang
- Sorghum Research Institute, Shanxi Key Laboratory of Sorghum Genetic and Germplasm Innovation, Shanxi Agricultural University, Yuci, Shanxi, People’s Republic of China
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Qi Guo
- Sorghum Research Institute, Shanxi Key Laboratory of Sorghum Genetic and Germplasm Innovation, Shanxi Agricultural University, Yuci, Shanxi, People’s Republic of China
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Xiaojuan Zhang
- Sorghum Research Institute, Shanxi Key Laboratory of Sorghum Genetic and Germplasm Innovation, Shanxi Agricultural University, Yuci, Shanxi, People’s Republic of China
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Xinqi Fan
- Sorghum Research Institute, Shanxi Key Laboratory of Sorghum Genetic and Germplasm Innovation, Shanxi Agricultural University, Yuci, Shanxi, People’s Republic of China
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
| | - Yuxiang Wu
- College of Agronomy, Shanxi Agricultural University, Taigu, Shanxi, People’s Republic of China
| | - Qingshan Liu
- National Laboratory of Minor Crops Germplasm Innovation and Molecular Breeding (in preparation), State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University, Taiyuan, Shanxi, People’s Republic of China
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Khan MAR, Mahmud A, Ghosh UK, Hossain MS, Siddiqui MN, Islam AKMA, Anik TR, Rahman MM, Sharma A, Abdelrahman M, Ha CV, Mostofa MG, Tran LSP. Exploring the Phenotypic and Genetic Variabilities in Yield and Yield-Related Traits of the Diallel-Crossed F 5 Population of Aus Rice. PLANTS (BASEL, SWITZERLAND) 2023; 12:3601. [PMID: 37896063 PMCID: PMC10610382 DOI: 10.3390/plants12203601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 10/02/2023] [Accepted: 10/14/2023] [Indexed: 10/29/2023]
Abstract
Rice (Oryza sativa) is a major crop and a main food for a major part of the global population. Rice species have derived from divergent agro-climatic regions, and thus, the local germplasm has a large genetic diversity. This study investigated the relationship between phenotypic and genetic variabilities of yield and yield-associated traits in Aus rice to identify short-duration, high-yielding genotypes. Targeting this issue, a field experiment was carried out to evaluate the performance of 51 Aus rice genotypes, including 50 accessions in F5 generation and one short-duration check variety BINAdhan-19. The genotypes exhibited a large and significant variation in yield and its associated traits, as evidenced by a wide range of their coefficient of variance. The investigated traits, including days to maturity (DM), plant height (PH), panicle length (PL) and 1000-grain weight (TW) exhibited a greater genotypic coefficient of variation than the environmental coefficient of variation. In addition, the high broad-sense heritability of DM, PH, PL and TW traits suggests that the genetic factors significantly influence the observed variations in these traits among the F5 Aus rice accessions. This study also revealed that the grain yield per hill (GY) displayed a significant positive correlation with PL, number of filled grains per panicle (FG) and TW at both genotype and phenotype levels. According to the hierarchical and K-means cluster analyses, the accessions BU-R-ACC-02, BU-R-ACC-08 and R2-36-3-1-1 have shorter DM and relatively higher GY than other Aus rice accessions. These three accessions could be employed in the ongoing and future breeding programs for the improvement of short-duration and high-yielding rice cultivars.
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Affiliation(s)
- Md. Arifur Rahman Khan
- Department of Agronomy, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh; (A.M.); (U.K.G.); (M.S.H.)
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
| | - Apple Mahmud
- Department of Agronomy, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh; (A.M.); (U.K.G.); (M.S.H.)
| | - Uttam Kumar Ghosh
- Department of Agronomy, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh; (A.M.); (U.K.G.); (M.S.H.)
| | - Md. Saddam Hossain
- Department of Agronomy, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh; (A.M.); (U.K.G.); (M.S.H.)
| | - Md. Nurealam Siddiqui
- Department of Biochemistry and Molecular Biology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh;
| | - A. K. M. Aminul Islam
- Department of Genetics and Plant Breeding, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh;
| | - Touhidur Rahman Anik
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
| | - Md. Mezanur Rahman
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
| | - Anket Sharma
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
| | - Mostafa Abdelrahman
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
| | - Chien Van Ha
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
| | - Mohammad Golam Mostofa
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA
| | - Lam-Son Phan Tran
- Institute of Genomics for Crop Abiotic Stress Tolerance, Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA; (T.R.A.); (M.M.R.); (M.A.); (C.V.H.)
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Jahan N, Sarker U, Hasan Saikat MM, Hossain MM, Azam MG, Ali D, Ercisli S, Golokhvast KS. Evaluation of yield attributes and bioactive phytochemicals of twenty amaranth genotypes of Bengal floodplain. Heliyon 2023; 9:e19644. [PMID: 37809463 PMCID: PMC10558890 DOI: 10.1016/j.heliyon.2023.e19644] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Revised: 08/25/2023] [Accepted: 08/29/2023] [Indexed: 10/10/2023] Open
Abstract
Twenty vegetable amaranth (VA) genotypes were evaluated to assess the variability, associations, path coefficient, and principal component analysis (PCA) of morpho-chemical traits. The genotypes exhibited adequate antioxidant colorants, phytochemicals, and antiradical capacity with significant variations across genotypes. Genetic parameters revealed selection criteria for the majority of the traits for improving amaranth foliage yield (FY). Based on correlation coefficient, stem weight, stem base diameter, root weight, plant height, and shoot weight for significant development of FY of VA. Observing significant genotypic correlation with high positive direct effects on FY, the path coefficient (PC) of root weight, stem base diameter, stem weight, and shoot weight could contribute to the noteworthy development of FY of VA. The genotypes AA5, AA6, AA8, AA10, AA11, AA19, and AA20 might be selected for high FY, antioxidant colorants, and antiradical phytochemicals to utilize as colorants and antiradical rich superior high yielding cultivars. The first PC accounted for 37.8% of the variances, which implies a larger proportion of variable information explained by PC1. The features that contributed more to PC1 were FY, SW, STW, RW, and PH, whereas Chl b, total Chl, and Chl a contributed to the second PC. This suggests that there are significant genetic differences between amaranths in terms of biochemical and agro-morphological characteristics. The findings of the current work support plant breeders to investigate the genetic potential of the amaranth germplasm, notably in biochemical parameters. High colorants enrich genotypes that can be selected for extracting natural colorants to use in food processing industries.
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Affiliation(s)
- Nishat Jahan
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Umakanta Sarker
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Mohammad Mehfuz Hasan Saikat
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Md Motaher Hossain
- Department of Plant Pathology, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Mohammad Golam Azam
- Pulses Research Centre, Bangladesh Agricultural Research Institute, Bangladesh, 6620
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh, Bangladesh, 2202
| | - Daoud Ali
- Department of Zoology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Sezai Ercisli
- Department of Horticulture, Faculty of Agriculture, Ataturk University, 25240, Erzurum, Turkey
- HGF Agro, Ata Teknokent, TR-25240, Erzurum, Turkey
| | - Kirill S. Golokhvast
- Siberian Federal Scientific Center of Agrobiotechnology RAS, 2b Centralnaya, Krasnoobsk, 630501, Russia
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Dukamo BH, Gedebo A, Tesfaye B, Degu HD. Genetic diversity of Ethiopian durum wheat ( T. turgidum subsp. durum) landraces under water stressed and non stressed conditions. Heliyon 2023; 9:e18359. [PMID: 37519732 PMCID: PMC10375799 DOI: 10.1016/j.heliyon.2023.e18359] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 07/13/2023] [Accepted: 07/14/2023] [Indexed: 08/01/2023] Open
Abstract
Ethiopia, being a major center of origin and diversity for durum wheat, possesses a highly variable genetic pool with diverse agroecological adaptations. Wheat landraces are an important source of genetic variation for breeding programs. This study was conducted to study the genotypic diversity of Ethiopian durum wheat genetic resources under two contrasting environments namely drought-stressed and non-stressed. It was carried out on 100 landraces and 4 local checks using an augmented design. Data were collected on 13 traits comprising yield and yield components, phenology, and canopy condition. The analysis of variance revealed significant differences between landraces for different traits with different sources of variation. Several landraces were found to outyield the checks at both environmental conditions. Intermediate to high estimates of the phenotypic coefficient of variation (PCV), genotypic coefficient of variation (GCV), heritability in a broad sense (h2b), and genetic advance in percent of the mean (GAPM) were observed for all the studied traits except for days to flowering at normal, thousands seed weight at stress, and days to maturity, leaf chlorophyll concentration measurement, and canopy temperature measurement at both conditions. The estimation of variability parameters showed that genotypic variation was higher than environmental variation for most traits. The number of tillers, spike length, kernel per spike, and grain yield indicated higher values for h2b and GAPM (74.42% and 20.86; 83.2% and 28.24; 70.79% and 28.0; and 89.54% and 74.71) at normal and (97.87% and 98.22; 71.27% and 28.51; 75.52% and 43.9; and 90.04% and 103.68) at the stressed condition, respectively. Spikelets per spike, kernel per spike, and thousands seed weight were positively correlated with grain yield. Grain yield exhibited a weak negative correlation with days to heading and days to maturity. Principal components analysis revealed that six traits were the major loadings on the first two principal components that describe 37.9% and 41.0% of the total morphological variance at normal and stressed conditions, respectively. Cluster analysis grouped the landraces into six clusters, with each cluster showing variation in performance for different traits under normal and stressed conditions. The intracluster distance was maximum in cluster I (D2 = 7.68) and (D2 = 8.19) at normal and stressed conditions respectively and the intercluster distance was found to be maximum between clusters I and IV (D2 = 11.02) and clusters I and II (D2 = 10.33) at normal and stressed conditions respectively. The presence of significant genetic variability among the evaluated durum wheat landraces suggests an opportunity for improvement of grain yield through the hybridization of genotypes from different clusters and subsequent selection. Genotypes with superior agronomic traits that outperform the best checks are identified as potential parents for yield improvement programs for moisture stress.
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Affiliation(s)
- Bantewalu Hailekidan Dukamo
- Hawassa University, College of Natural and Computational Sciences, Ethiopia
- Hawassa University, College of Agriculture, Ethiopia
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Hossain MA, Sarker U, Azam MG, Kobir MS, Roychowdhury R, Ercisli S, Ali D, Oba S, Golokhvast KS. Integrating BLUP, AMMI, and GGE Models to Explore GE Interactions for Adaptability and Stability of Winter Lentils ( Lens culinaris Medik.). PLANTS (BASEL, SWITZERLAND) 2023; 12:2079. [PMID: 37299058 PMCID: PMC10255267 DOI: 10.3390/plants12112079] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 05/11/2023] [Accepted: 05/20/2023] [Indexed: 06/12/2023]
Abstract
Lentil yield is a complicated quantitative trait; it is significantly influenced by the environment. It is crucial for improving human health and nutritional security in the country as well as for a sustainable agricultural system. The study was laid out to determine the stable genotype through the collaboration of G × E by AMMI and GGE biplot and to identify the superior genotypes using 33 parametric and non-parametric stability statistics of 10 genotypes across four different conditions. The total G × E effect was divided into two primary components by the AMMI model. For days to flowering, days to maturity, plant height, pods per plant, and hundred seed weight, IPCA1 was significant and accounted for 83%, 75%, 100%, and 62%, respectively. Both IPCA1 and IPCA2 were non-significant for yield per plant and accounted for 62% of the overall G × E interaction. An estimated set of eight stability parameters showed strong positive correlations with mean seed yield, and these measurements can be utilized to choose stable genotypes. The productivity of lentils has varied greatly in the environment, ranging from 786 kg per ha in the MYM environment to 1658 kg per ha in the ISD environment, according to the AMMI biplot. Three genotypes (G8, G7, and G2) were shown to be the most stable based on non-parametric stability scores for grain yield. G8, G7, G2, and G5 were determined as the top lentil genotypes based on grain production using numerical stability metrics such as Francis's coefficient of variation, Shukla stability value (σi2), and Wrick's ecovalence (Wi). Genotypes G7, G10, and G4 were the most stable with the highest yield, according to BLUP-based simultaneous selection stability characteristics. The findings of graphic stability methods such as AMMI and GGE for identifying the high-yielding and stable lentil genotypes were very similar. While the GGE biplot indicated G2, G10, and G7 as the most stable and high-producing genotypes, AMMI analysis identified G2, G9, G10, and G7. These selected genotypes would be used to release a new variety. Considering all the stability models, such as Eberhart and Russell's regression and deviation from regression, additive main effects, multiplicative interactions (AMMI) analysis, and GGE, the genotypes G2, G9, and G7 could be used as well-adapted genotypes with moderate grain yield in all tested environments.
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Affiliation(s)
- Md. Amir Hossain
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - Umakanta Sarker
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur 1706, Bangladesh
| | - Md. Golam Azam
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
- Pulses Research Centre, BARI, Ishurdi, Pabna 6620, Bangladesh
| | | | - Rajib Roychowdhury
- Department of Biotechnology, Visva-Bharati Central University, Santiniketan 731235, West Bengal, India
| | - Sezai Ercisli
- Department of Horticulture, Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
- HGF Agro, Ata Teknokent, Erzurum 25240, Türkiye
| | - Daoud Ali
- Department of Zoology, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia
| | - Shinya Oba
- Laboratory of Field Science, Faculty of Applied Biological Sciences, Gifu University, Yanagido 1-1, Gifu 501-1193, Japan
| | - Kirill S. Golokhvast
- Siberian Federal Scientific Center of Agrobiotechnology RAS, 2b Centralnaya, Krasnoobsk 630501, Russia
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