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Itam MO, Mega R, Gorafi YSA, Yamasaki Y, Tahir ISA, Akashi K, Tsujimoto H. Genomic analysis for heat and combined heat-drought resilience in bread wheat under field conditions. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2022; 135:337-350. [PMID: 34655314 PMCID: PMC8741676 DOI: 10.1007/s00122-021-03969-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 10/06/2021] [Indexed: 05/02/2023]
Abstract
KEY MESSAGE GWAS on a bread wheat panel with high D genome diversity identified novel alleles and QTLs associated with resilience to combined heat and drought stress under natural field conditions. As heat (H) and drought stresses occur concurrently under field conditions, studying them separately offers limited opportunities for wheat improvement. Here, a wheat diversity panel containing Aegilops tauschii introgressions was evaluated under H and combined heat-drought (HD) stresses to identify quantitative trait loci (QTLs) associated with resilience to the stresses, and to assess the practicability of harnessing Ae. tauschii diversity for breeding for combined stress resilience. Using genome-wide analysis, we identified alleles and QTLs on chromosomes 3D, 5D, and 7A controlling grain yield (GY), kernel number per spike, and thousand-kernel weight, and on 3D (521-549 Mbp) controlling GY alone. A strong marker-trait association (MTA) for GY stability on chromosome 3D (508.3 Mbp) explained 20.3% of the variation. Leaf traits-canopy temperature, vegetation index, and carbon isotope composition-were controlled by five QTLs on 2D (23-96, 511-554, and 606-614 Mbp), 3D (155-171 Mbp), and 5D (407-413 Mbp); some of them were pleiotropic for GY and yield-related traits. Further analysis revealed candidate genes, including GA20ox, regulating GY stability, and CaaX prenyl protease 2, regulating canopy temperature at the flowering stage, under H and HD stresses. As genome-wide association studies under HD in field conditions are scarce, our results provide genomic landmarks for wheat breeding to improve adaptation to H and HD conditions under climate change.
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Affiliation(s)
- Michael O Itam
- Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan
| | - Ryosuke Mega
- Graduate School of Sciences and Technology for Innovation, Yamaguchi University, Yamaguchi, 753-8515, Japan
| | - Yasir S A Gorafi
- Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan
- Agricultural Research Corporation, Wheat Research Program, P.O. Box 126, Wad Medani, Sudan
| | - Yuji Yamasaki
- Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan
| | - Izzat S A Tahir
- Agricultural Research Corporation, Wheat Research Program, P.O. Box 126, Wad Medani, Sudan
| | - Kinya Akashi
- Faculty of Agriculture, Tottori University, Tottori, 680-8553, Japan
| | - Hisashi Tsujimoto
- Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.
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Mariem SB, Gámez AL, Larraya L, Fuertes-Mendizabal T, Cañameras N, Araus JL, McGrath SP, Hawkesford MJ, Murua CG, Gaudeul M, Medina L, Paton A, Cattivelli L, Fangmeier A, Bunce J, Tausz-Posch S, Macdonald AJ, Aranjuelo I. Assessing the evolution of wheat grain traits during the last 166 years using archived samples. Sci Rep 2020; 10:21828. [PMID: 33311545 PMCID: PMC7733497 DOI: 10.1038/s41598-020-78504-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Accepted: 11/20/2020] [Indexed: 11/09/2022] Open
Abstract
The current study focuses on yield and nutritional quality changes of wheat grain over the last 166 years. It is based on wheat grain quality analyses carried out on samples collected between 1850 and 2016. Samples were obtained from the Broadbalk Continuous Wheat Experiment (UK) and from herbaria from 16 different countries around the world. Our study showed that, together with an increase in carbohydrate content, an impoverishment of mineral composition and protein content occurred. The imbalance in carbohydrate/protein content was specially marked after the 1960's, coinciding with strong increases in ambient [CO2] and temperature and the introduction of progressively shorter straw varieties. The implications of altered crop physiology are discussed.
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Affiliation(s)
- Sinda Ben Mariem
- Spanish National Research Council (CSIC)-Government of Navarre, AgroBiotechnology Institute (IdAB), Av. Pamplona 123, 31006, Mutilva, Spain
| | - Angie L Gámez
- Spanish National Research Council (CSIC)-Government of Navarre, AgroBiotechnology Institute (IdAB), Av. Pamplona 123, 31006, Mutilva, Spain
| | - Luis Larraya
- Institute for Multidisciplinary Applied Biology, Dpto. Agronomía, Biotecnología y Alimentación, Universidad Pública de Navarra, Campus Arrosadia, 31006, Pamplona, Spain
| | | | - Nuria Cañameras
- Universitat Politècnica de Catalunya, EsteveTerrades 8, Building 4, Castelldefels, Spain
| | - José L Araus
- Integrative Crop Ecophysiology Group, Plant Physiology Section, Faculty of Biology, University of Barcelona, Barcelona, and AGROTECNIO Center, Lleida, Spain
| | - Steve P McGrath
- Sustainable Agriculture Sciences, Rothamsted Research, Harpenden, AL5 2JQ, Hertfordshire, UK
| | | | - Carmen Gonzalez Murua
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Bilbao, Spain
| | - Myriam Gaudeul
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum National D'Histoire Naturelle, CNRS, EPHE, UA, Sorbonne Université, 57 rue Cuvier, CP 39, 75005, Paris, France
| | - Leopoldo Medina
- Spanish National Research Council (CSIC), Real Jardín Botánico, C/ Claudio Moyano 1, Madrid, Spain
| | - Alan Paton
- Royal Botanic Gardens Kew, Kew Richmond, TW9 3AB, UK
| | - Luigi Cattivelli
- Agricultural Research Council (CREA), Centre for Genomics and Bioinformatics, Via San Protaso 302, Fiorenzuolad'Arda, Italy
| | - Andreas Fangmeier
- Institute of Landscape and Plant Ecology, University of Hohenheim, August-von-Hartmann-Str. 3, 70599, Stuttgart, Germany
| | - James Bunce
- Adaptive Cropping Systems Lab (Retired), Beltsville Agricultural Research Center, Agricultural Research Service, US Department of Agriculture, Beltsville, MD, 20705, USA
| | - Sabine Tausz-Posch
- Department of Agriculture, Science and the Environment, School of Health, Medical and Applied Sciences, CQ University Australia, Rockhampton, QLD, Australia
| | - Andy J Macdonald
- Sustainable Agriculture Sciences, Rothamsted Research, Harpenden, AL5 2JQ, Hertfordshire, UK
| | - Iker Aranjuelo
- Spanish National Research Council (CSIC)-Government of Navarre, AgroBiotechnology Institute (IdAB), Av. Pamplona 123, 31006, Mutilva, Spain.
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Balboa K, Ballesteros GI, Molina-Montenegro MA. Integration of Physiological and Molecular Traits Would Help to Improve the Insights of Drought Resistance in Highbush Blueberry Cultivars. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1457. [PMID: 33137914 PMCID: PMC7693893 DOI: 10.3390/plants9111457] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Revised: 10/02/2020] [Accepted: 10/12/2020] [Indexed: 11/16/2022]
Abstract
Water deficit or drought is one of the most severe factors limiting plant yield or fruit quality. Thus, water availability for irrigation is decisive for crop success, such as the case of highbush blueberry (Vaccinium corymbosum L.). Therefore, drought stress may compromise blueberry production due to lower fruit weight or fruit yield. Despite this, it is unclear if there is any difference in the response of blueberry cultivars to water deficit, either in terms of physiological and molecular parameters, or in terms of their sensitivity or resistance to drought. In this study, we determined the effect of drought on different physiological parameters in blueberry plants (relative water content (RWC), photochemical efficiency of photosystem II (Fv/Fm), Carbon Isotopic Discrimination, and proline content) in six V. corymbosum cultivars. We also explored molecular responses in terms of gene expression coding for late embryogenesis abundant proteins. Finally, we estimated cultivar water deficit resistance using an integrative model based on physiological results. Upon water deficit conditions, we found reductions in Fv/Fm, RWC, and isotopic discrimination of 13C (Δ13C), while proline content increased significantly for all cultivars. Additionally, we also found differences in the estimated water deficit resistance index. These results indicate differences in water deficit resistance, possibly due to variations in cultivars' genetic composition.
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Affiliation(s)
- Karen Balboa
- Bachillerato en Ciencias, Facultad de Ciencias, Universidad Santo Tomás, Av. Circunvalación Poniente #1855, Talca 3460000, Chile;
| | | | - Marco A. Molina-Montenegro
- Instituto de Ciencias Biológicas, Universidad de Talca, Campus Talca 3460000, Chile
- Centro de Estudios Avanzados en Zonas Áridas (CEAZA), Facultad de Ciencias del Mar, Universidad Católica del Norte, Coquimbo 1281, Chile
- Centro de Investigaciones y Estudios Avanzados del Maule (CIEAM), Universidad Católica del Maule, Talca 3460000, Chile
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