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For: Fengler A, Govindarajan LN, Chen T, Frank MJ. Likelihood approximation networks (LANs) for fast inference of simulation models in cognitive neuroscience. eLife 2021;10:e65074. [PMID: 33821788 PMCID: PMC8102064 DOI: 10.7554/elife.65074] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2020] [Accepted: 04/01/2021] [Indexed: 11/13/2022]  Open
Number Cited by Other Article(s)
1
Ging-Jehli NR, Kuhn M, Blank JM, Chanthrakumar P, Steinberger DC, Yu Z, Herrington TM, Dillon DG, Pizzagalli DA, Frank MJ. Cognitive Signatures of Depressive and Anhedonic Symptoms and Affective States Using Computational Modeling and Neurocognitive Testing. BIOLOGICAL PSYCHIATRY. COGNITIVE NEUROSCIENCE AND NEUROIMAGING 2024;9:726-736. [PMID: 38401881 PMCID: PMC11227402 DOI: 10.1016/j.bpsc.2024.02.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 02/03/2024] [Accepted: 02/09/2024] [Indexed: 02/26/2024]
2
Rmus M, Pan TF, Xia L, Collins AGE. Artificial neural networks for model identification and parameter estimation in computational cognitive models. PLoS Comput Biol 2024;20:e1012119. [PMID: 38748770 PMCID: PMC11132492 DOI: 10.1371/journal.pcbi.1012119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Revised: 05/28/2024] [Accepted: 04/27/2024] [Indexed: 05/28/2024]  Open
3
Grahek I, Leng X, Musslick S, Shenhav A. Control adjustment costs limit goal flexibility: Empirical evidence and a computational account. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.08.22.554296. [PMID: 37662382 PMCID: PMC10473589 DOI: 10.1101/2023.08.22.554296] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/05/2023]
4
Rmus M, Pan TF, Xia L, Collins AGE. Artificial neural networks for model identification and parameter estimation in computational cognitive models. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.09.14.557793. [PMID: 37767088 PMCID: PMC10521012 DOI: 10.1101/2023.09.14.557793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
5
Murrow M, Holmes WR. PyBEAM: A Bayesian approach to parameter inference for a wide class of binary evidence accumulation models. Behav Res Methods 2024;56:2636-2656. [PMID: 37550470 DOI: 10.3758/s13428-023-02162-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/03/2023] [Indexed: 08/09/2023]
6
Nunez MD, Fernandez K, Srinivasan R, Vandekerckhove J. A tutorial on fitting joint models of M/EEG and behavior to understand cognition. Behav Res Methods 2024:10.3758/s13428-023-02331-x. [PMID: 38409458 DOI: 10.3758/s13428-023-02331-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/21/2023] [Indexed: 02/28/2024]
7
Rasanan AHH, Rad JA, Sewell DK. Are there jumps in evidence accumulation, and what, if anything, do they reflect psychologically? An analysis of Lévy Flights models of decision-making. Psychon Bull Rev 2024;31:32-48. [PMID: 37528276 DOI: 10.3758/s13423-023-02284-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/22/2023] [Indexed: 08/03/2023]
8
Hemmatian B, Varshney LR, Pi F, Barbey AK. The utilitarian brain: Moving beyond the Free Energy Principle. Cortex 2024;170:69-79. [PMID: 38135613 DOI: 10.1016/j.cortex.2023.11.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 11/28/2023] [Accepted: 11/28/2023] [Indexed: 12/24/2023]
9
Jalalian P, Golubickis M, Sharma Y, Neil Macrae C. Learning about me and you: Only deterministic stimulus associations elicit self-prioritization. Conscious Cogn 2023;116:103602. [PMID: 37952404 DOI: 10.1016/j.concog.2023.103602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Revised: 09/18/2023] [Accepted: 11/03/2023] [Indexed: 11/14/2023]
10
Kang I, Molenaar D, Ratcliff R. A Modeling Framework to Examine Psychological Processes Underlying Ordinal Responses and Response Times of Psychometric Data. PSYCHOMETRIKA 2023;88:940-974. [PMID: 37171779 DOI: 10.1007/s11336-023-09902-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 10/25/2022] [Accepted: 01/03/2023] [Indexed: 05/13/2023]
11
Smith PL. "Reliable organisms from unreliable components" revisited: the linear drift, linear infinitesimal variance model of decision making. Psychon Bull Rev 2023;30:1323-1359. [PMID: 36720804 PMCID: PMC10482797 DOI: 10.3758/s13423-022-02237-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/13/2022] [Indexed: 02/02/2023]
12
Hashemi M, Vattikonda AN, Jha J, Sip V, Woodman MM, Bartolomei F, Jirsa VK. Amortized Bayesian inference on generative dynamical network models of epilepsy using deep neural density estimators. Neural Netw 2023;163:178-194. [PMID: 37060871 DOI: 10.1016/j.neunet.2023.03.040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 03/24/2023] [Accepted: 03/30/2023] [Indexed: 04/03/2023]
13
Self-judgment dissected: A computational modeling analysis of self-referential processing and its relationship to trait mindfulness facets and depression symptoms. COGNITIVE, AFFECTIVE & BEHAVIORAL NEUROSCIENCE 2023;23:171-189. [PMID: 36168080 PMCID: PMC9931629 DOI: 10.3758/s13415-022-01033-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 08/29/2022] [Indexed: 11/08/2022]
14
Govindarajan LN, Calvert JS, Parker SR, Jung M, Darie R, Miranda P, Shaaya E, Borton DA, Serre T. Fast inference of spinal neuromodulation for motor control using amortized neural networks. J Neural Eng 2022;19:10.1088/1741-2552/ac9646. [PMID: 36174534 PMCID: PMC9668352 DOI: 10.1088/1741-2552/ac9646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 09/29/2022] [Indexed: 11/12/2022]
15
Persistent activity in human parietal cortex mediates perceptual choice repetition bias. Nat Commun 2022;13:6015. [PMID: 36224207 PMCID: PMC9556658 DOI: 10.1038/s41467-022-33237-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Accepted: 09/08/2022] [Indexed: 11/09/2022]  Open
16
Fengler A, Bera K, Pedersen ML, Frank MJ. Beyond Drift Diffusion Models: Fitting a Broad Class of Decision and Reinforcement Learning Models with HDDM. J Cogn Neurosci 2022;34:1780-1805. [PMID: 35939629 DOI: 10.1162/jocn_a_01902] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
17
Boelts J, Lueckmann JM, Gao R, Macke JH. Flexible and efficient simulation-based inference for models of decision-making. eLife 2022;11:77220. [PMID: 35894305 PMCID: PMC9374439 DOI: 10.7554/elife.77220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 07/26/2022] [Indexed: 11/22/2022]  Open
18
Boehm U, Cox S, Gantner G, Stevenson R. Efficient numerical approximation of a non-regular Fokker-Planck equation associated with first-passage time distributions. BIT. NUMERICAL MATHEMATICS 2022;62:1355-1382. [PMID: 36415672 PMCID: PMC9674775 DOI: 10.1007/s10543-022-00914-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 02/28/2022] [Indexed: 06/16/2023]
19
Collins AGE, Shenhav A. Advances in modeling learning and decision-making in neuroscience. Neuropsychopharmacology 2022;47:104-118. [PMID: 34453117 PMCID: PMC8617262 DOI: 10.1038/s41386-021-01126-y] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/03/2021] [Revised: 07/14/2021] [Accepted: 07/22/2021] [Indexed: 02/07/2023]
20
Rac-Lubashevsky R, Frank MJ. Analogous computations in working memory input, output and motor gating: Electrophysiological and computational modeling evidence. PLoS Comput Biol 2021;17:e1008971. [PMID: 34097689 PMCID: PMC8211210 DOI: 10.1371/journal.pcbi.1008971] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 06/17/2021] [Accepted: 04/17/2021] [Indexed: 12/19/2022]  Open
21
Feltgen Q, Daunizeau J. An Overcomplete Approach to Fitting Drift-Diffusion Decision Models to Trial-By-Trial Data. Front Artif Intell 2021;4:531316. [PMID: 33898982 PMCID: PMC8064018 DOI: 10.3389/frai.2021.531316] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Accepted: 02/17/2021] [Indexed: 11/13/2022]  Open
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