1
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Schmehl MN, Caruso VC, Chen Y, Jun NY, Willett SM, Mohl JT, Ruff DA, Cohen M, Ebihara AF, Freiwald WA, Tokdar ST, Groh JM. Multiple objects evoke fluctuating responses in several regions of the visual pathway. eLife 2024; 13:e91129. [PMID: 38489224 PMCID: PMC10942787 DOI: 10.7554/elife.91129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 02/15/2024] [Indexed: 03/17/2024] Open
Abstract
How neural representations preserve information about multiple stimuli is mysterious. Because tuning of individual neurons is coarse (e.g., visual receptive field diameters can exceed perceptual resolution), the populations of neurons potentially responsive to each individual stimulus can overlap, raising the question of how information about each item might be segregated and preserved in the population. We recently reported evidence for a potential solution to this problem: when two stimuli were present, some neurons in the macaque visual cortical areas V1 and V4 exhibited fluctuating firing patterns, as if they responded to only one individual stimulus at a time (Jun et al., 2022). However, whether such an information encoding strategy is ubiquitous in the visual pathway and thus could constitute a general phenomenon remains unknown. Here, we provide new evidence that such fluctuating activity is also evoked by multiple stimuli in visual areas responsible for processing visual motion (middle temporal visual area, MT), and faces (middle fundus and anterolateral face patches in inferotemporal cortex - areas MF and AL), thus extending the scope of circumstances in which fluctuating activity is observed. Furthermore, consistent with our previous results in the early visual area V1, MT exhibits fluctuations between the representations of two stimuli when these form distinguishable objects but not when they fuse into one perceived object, suggesting that fluctuating activity patterns may underlie visual object formation. Taken together, these findings point toward an updated model of how the brain preserves sensory information about multiple stimuli for subsequent processing and behavioral action.
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Affiliation(s)
- Meredith N Schmehl
- Department of Neurobiology, Duke UniversityDurhamUnited States
- Center for Cognitive Neuroscience, Duke UniversityDurhamUnited States
- Duke Institute for Brain Sciences, Duke UniversityDurhamUnited States
| | - Valeria C Caruso
- Department of Psychiatry, University of MichiganAnn ArborUnited States
| | - Yunran Chen
- Department of Statistical Science, Duke UniversityDurhamUnited States
| | - Na Young Jun
- Department of Neurobiology, Duke UniversityDurhamUnited States
- Duke Institute for Brain Sciences, Duke UniversityDurhamUnited States
| | - Shawn M Willett
- Department of Ophthalmology, University of PittsburghPittsburghUnited States
| | - Jeff T Mohl
- American Medical Group AssociationAlexandriaUnited States
| | - Douglas A Ruff
- Department of Neurobiology, University of ChicagoChicagoUnited States
| | - Marlene Cohen
- Department of Neurobiology, University of ChicagoChicagoUnited States
| | | | | | - Surya T Tokdar
- Duke Institute for Brain Sciences, Duke UniversityDurhamUnited States
- Department of Statistical Science, Duke UniversityDurhamUnited States
| | - Jennifer M Groh
- Department of Neurobiology, Duke UniversityDurhamUnited States
- Center for Cognitive Neuroscience, Duke UniversityDurhamUnited States
- Duke Institute for Brain Sciences, Duke UniversityDurhamUnited States
- Department of Psychology & Neuroscience, Duke UniversityDurhamUnited States
- Department of Computer Science, Duke UniversityDurhamUnited States
- Department of Biomedical Engineering, Duke UniversityDurhamUnited States
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2
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Haimerl C, Ruff DA, Cohen MR, Savin C, Simoncelli EP. Targeted V1 comodulation supports task-adaptive sensory decisions. Nat Commun 2023; 14:7879. [PMID: 38036519 PMCID: PMC10689451 DOI: 10.1038/s41467-023-43432-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Accepted: 11/09/2023] [Indexed: 12/02/2023] Open
Abstract
Sensory-guided behavior requires reliable encoding of stimulus information in neural populations, and flexible, task-specific readout. The former has been studied extensively, but the latter remains poorly understood. We introduce a theory for adaptive sensory processing based on functionally-targeted stochastic modulation. We show that responses of neurons in area V1 of monkeys performing a visual discrimination task exhibit low-dimensional, rapidly fluctuating gain modulation, which is stronger in task-informative neurons and can be used to decode from neural activity after few training trials, consistent with observed behavior. In a simulated hierarchical neural network model, such labels are learned quickly and can be used to adapt downstream readout, even after several intervening processing stages. Consistently, we find the modulatory signal estimated in V1 is also present in the activity of simultaneously recorded MT units, and is again strongest in task-informative neurons. These results support the idea that co-modulation facilitates task-adaptive hierarchical information routing.
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Affiliation(s)
- Caroline Haimerl
- Center for Neural Science, New York University, New York, NY, 10003, USA.
- Champalimaud Centre for the Unknown, Lisbon, Portugal.
| | - Douglas A Ruff
- Department of Neurobiology, University of Chicago, Chicago, IL, 60637, US
| | - Marlene R Cohen
- Department of Neurobiology, University of Chicago, Chicago, IL, 60637, US
| | - Cristina Savin
- Center for Neural Science, New York University, New York, NY, 10003, USA
- Center for Data Science, New York University, New York, NY, 10011, USA
| | - Eero P Simoncelli
- Center for Neural Science, New York University, New York, NY, 10003, USA
- Center for Data Science, New York University, New York, NY, 10011, USA
- Flatiron Institute, Simons Foundation, New York, NY, 10010, USA
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3
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Schmehl MN, Caruso VC, Chen Y, Jun NY, Willett SM, Mohl JT, Ruff DA, Cohen M, Ebihara AF, Freiwald W, Tokdar ST, Groh JM. Multiple objects evoke fluctuating responses in several regions of the visual pathway. bioRxiv 2023:2023.07.19.549668. [PMID: 37502939 PMCID: PMC10370052 DOI: 10.1101/2023.07.19.549668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/29/2023]
Abstract
How neural representations preserve information about multiple stimuli is mysterious. Because tuning of individual neurons is coarse (for example, visual receptive field diameters can exceed perceptual resolution), the populations of neurons potentially responsive to each individual stimulus can overlap, raising the question of how information about each item might be segregated and preserved in the population. We recently reported evidence for a potential solution to this problem: when two stimuli were present, some neurons in the macaque visual cortical areas V1 and V4 exhibited fluctuating firing patterns, as if they responded to only one individual stimulus at a time. However, whether such an information encoding strategy is ubiquitous in the visual pathway and thus could constitute a general phenomenon remains unknown. Here we provide new evidence that such fluctuating activity is also evoked by multiple stimuli in visual areas responsible for processing visual motion (middle temporal visual area, MT), and faces (middle fundus and anterolateral face patches in inferotemporal cortex - areas MF and AL), thus extending the scope of circumstances in which fluctuating activity is observed. Furthermore, consistent with our previous results in the early visual area V1, MT exhibits fluctuations between the representations of two stimuli when these form distinguishable objects but not when they fuse into one perceived object, suggesting that fluctuating activity patterns may underlie visual object formation. Taken together, these findings point toward an updated model of how the brain preserves sensory information about multiple stimuli for subsequent processing and behavioral action. Impact Statement We find neural fluctuations in multiple areas along the visual cortical hierarchy that could allow the brain to represent distinct co-occurring visual stimuli.
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4
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Jun NY, Ruff DA, Kramer LE, Bowes B, Tokdar ST, Cohen MR, Groh JM. Coordinated multiplexing of information about separate objects in visual cortex. eLife 2022; 11:e76452. [PMID: 36444983 PMCID: PMC9708082 DOI: 10.7554/elife.76452] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Accepted: 10/21/2022] [Indexed: 11/30/2022] Open
Abstract
Sensory receptive fields are large enough that they can contain more than one perceptible stimulus. How, then, can the brain encode information about each of the stimuli that may be present at a given moment? We recently showed that when more than one stimulus is present, single neurons can fluctuate between coding one vs. the other(s) across some time period, suggesting a form of neural multiplexing of different stimuli (Caruso et al., 2018). Here, we investigate (a) whether such coding fluctuations occur in early visual cortical areas; (b) how coding fluctuations are coordinated across the neural population; and (c) how coordinated coding fluctuations depend on the parsing of stimuli into separate vs. fused objects. We found coding fluctuations do occur in macaque V1 but only when the two stimuli form separate objects. Such separate objects evoked a novel pattern of V1 spike count ('noise') correlations involving distinct distributions of positive and negative values. This bimodal correlation pattern was most pronounced among pairs of neurons showing the strongest evidence for coding fluctuations or multiplexing. Whether a given pair of neurons exhibited positive or negative correlations depended on whether the two neurons both responded better to the same object or had different object preferences. Distinct distributions of spike count correlations based on stimulus preferences were also seen in V4 for separate objects but not when two stimuli fused to form one object. These findings suggest multiple objects evoke different response dynamics than those evoked by single stimuli, lending support to the multiplexing hypothesis and suggesting a means by which information about multiple objects can be preserved despite the apparent coarseness of sensory coding.
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Affiliation(s)
- Na Young Jun
- Department of Neurobiology, Duke UniversityDurhamUnited States
- Center for Cognitive Neuroscience, Duke UniversityDurhamUnited States
- Duke Institute for Brain SciencesDurhamUnited States
| | - Douglas A Ruff
- Department of Neuroscience, University of PittsburghPittsburghUnited States
- Center for the Neural Basis of Cognition, University of PittsburghPittsburghUnited States
| | - Lily E Kramer
- Department of Neuroscience, University of PittsburghPittsburghUnited States
- Center for the Neural Basis of Cognition, University of PittsburghPittsburghUnited States
| | - Brittany Bowes
- Department of Neuroscience, University of PittsburghPittsburghUnited States
- Center for the Neural Basis of Cognition, University of PittsburghPittsburghUnited States
| | - Surya T Tokdar
- Department of Statistical Science, Duke UniversityDurhamUnited States
| | - Marlene R Cohen
- Department of Neuroscience, University of PittsburghPittsburghUnited States
- Center for the Neural Basis of Cognition, University of PittsburghPittsburghUnited States
| | - Jennifer M Groh
- Department of Neurobiology, Duke UniversityDurhamUnited States
- Center for Cognitive Neuroscience, Duke UniversityDurhamUnited States
- Duke Institute for Brain SciencesDurhamUnited States
- Department of Psychology and Neuroscience, Duke UniversityDurhamUnited States
- Department of Biomedical Engineering, Duke UniversityDurhamUnited States
- Department of Computer Science, Duke UniversityDurhamUnited States
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5
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Ni AM, Bowes BS, Ruff DA, Cohen MR. Methylphenidate as a causal test of translational and basic neural coding hypotheses. Proc Natl Acad Sci U S A 2022; 119:e2120529119. [PMID: 35467980 PMCID: PMC9169912 DOI: 10.1073/pnas.2120529119] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 03/17/2022] [Indexed: 11/18/2022] Open
Abstract
Most systems neuroscience studies fall into one of two categories: basic science work aimed at understanding the relationship between neurons and behavior, or translational work aimed at developing treatments for neuropsychiatric disorders. Here we use these two approaches to inform and enhance each other. Our study both tests hypotheses about basic science neural coding principles and elucidates the neuronal mechanisms underlying clinically relevant behavioral effects of systemically administered methylphenidate (Ritalin). We discovered that orally administered methylphenidate, used clinically to treat attention deficit hyperactivity disorder (ADHD) and generally to enhance cognition, increases spatially selective visual attention, enhancing visual performance at only the attended location. Further, we found that this causal manipulation enhances vision in rhesus macaques specifically when it decreases the mean correlated variability of neurons in visual area V4. Our findings demonstrate that the visual system is a platform for understanding the neural underpinnings of both complex cognitive processes (basic science) and neuropsychiatric disorders (translation). Addressing basic science hypotheses, our results are consistent with a scenario in which methylphenidate has cognitively specific effects by working through naturally selective cognitive mechanisms. Clinically, our findings suggest that the often staggeringly specific symptoms of neuropsychiatric disorders may be caused and treated by leveraging general mechanisms.
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Affiliation(s)
- Amy M. Ni
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260
| | - Brittany S. Bowes
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260
| | - Douglas A. Ruff
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260
| | - Marlene R. Cohen
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260
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6
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Srinath R, Ruff DA, Cohen MR. Attention improves information flow between neuronal populations without changing the communication subspace. Curr Biol 2021; 31:5299-5313.e4. [PMID: 34699782 PMCID: PMC8665027 DOI: 10.1016/j.cub.2021.09.076] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 09/22/2021] [Accepted: 09/28/2021] [Indexed: 10/20/2022]
Abstract
Visual attention allows observers to change the influence of different parts of a visual scene on their behavior, suggesting that information can be flexibly shared between visual cortex and neurons involved in decision making. We investigated the neural substrate of flexible information routing by analyzing the activity of populations of visual neurons in the medial temporal area (MT) and oculo-motor neurons in the superior colliculus (SC) while rhesus monkeys switched spatial attention. We demonstrated that attention increases the efficacy of visuomotor communication: trial-to-trial variability in SC population activity could be better predicted by the activity of the MT population (and vice versa) when attention was directed toward their joint receptive fields. Surprisingly, this improvement in prediction was not explained by changes in the dimensionality of the shared subspace or in the magnitude of local or shared pairwise noise correlations. These results lay a foundation for future theoretical and experimental studies into how visual attention can flexibly change information flow between sensory and decision neurons.
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Affiliation(s)
- Ramanujan Srinath
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA.
| | - Douglas A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA
| | - Marlene R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA
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7
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Abstract
Neuronal population responses to sensory stimuli are remarkably flexible. The responses of neurons in visual cortex have heterogeneous dependence on stimulus properties (e.g., contrast), processes that affect all stages of visual processing (e.g., adaptation), and cognitive processes (e.g., attention or task switching). Understanding whether these processes affect similar neuronal populations and whether they have similar effects on entire populations can provide insight into whether they utilize analogous mechanisms. In particular, it has recently been demonstrated that attention has low rank effects on the covariability of populations of visual neurons, which impacts perception and strongly constrains mechanistic models. We hypothesized that measuring changes in population covariability associated with other sensory and cognitive processes could clarify whether they utilize similar mechanisms or computations. Our experimental design included measurements in multiple visual areas using four distinct sensory and cognitive processes. We found that contrast, adaptation, attention, and task switching affect the variability of responses of populations of neurons in primate visual cortex in a similarly low rank way. These results suggest that a given circuit may use similar mechanisms to perform many forms of modulation and likely reflects a general principle that applies to a wide range of brain areas and sensory, cognitive, and motor processes.
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Affiliation(s)
- Douglas A Ruff
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
| | - Cheng Xue
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
| | - Lily E Kramer
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260
| | - Faisal Baqai
- Program in Neural Computation, Carnegie Mellon University, Pittsburgh, PA 15260
| | - Marlene R Cohen
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260;
- Program in Neural Computation, Carnegie Mellon University, Pittsburgh, PA 15260
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8
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Ruff DA, Cohen MR. Simultaneous multi-area recordings suggest that attention improves performance by reshaping stimulus representations. Nat Neurosci 2019; 22:1669-1676. [PMID: 31477898 PMCID: PMC6760994 DOI: 10.1038/s41593-019-0477-1] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Accepted: 07/24/2019] [Indexed: 12/23/2022]
Abstract
Visual attention dramatically improves individuals' ability to see and modulates the responses of neurons in every known visual and oculomotor area, but whether such modulations can account for perceptual improvements is unclear. We measured the relationship between populations of visual neurons, oculomotor neurons and behavior during detection and discrimination tasks. We found that neither of the two prominent hypothesized neuronal mechanisms underlying attention (which concern changes in information coding and the way sensory information is read out) provide a satisfying account of the observed behavioral improvements. Instead, our results are more consistent with the hypothesis that attention reshapes the representation of attended stimuli to more effectively influence behavior. Our results suggest a path toward understanding the neural underpinnings of perception and cognition in health and disease by analyzing neuronal responses in ways that are constrained by behavior and interactions between brain areas.
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Affiliation(s)
- Douglas A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA.
| | - Marlene R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA
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9
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Abstract
Understanding how cognitive processes affect the responses of sensory neurons may clarify the relationship between neuronal population activity and behavior. However, tools for analyzing neuronal activity have not kept up with technological advances in recording from large neuronal populations. Here, we describe prevalent hypotheses of how cognitive processes affect sensory neurons, driven largely by a model based on the activity of single neurons or pools of neurons as the units of computation. We then use simple simulations to expand this model to a new conceptual framework that focuses on subspaces of population activity as the relevant units of computation, uses comparisons between brain areas or to behavior to guide analyses of these subspaces, and suggests that population activity is optimized to decode the large variety of stimuli and tasks that animals encounter in natural behavior. This framework provides new ways of understanding the ever-growing quantity of recorded population activity data.
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Affiliation(s)
- Douglas A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, USA;
| | - Amy M Ni
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, USA;
| | - Marlene R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania 15213, USA;
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10
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Huang C, Ruff DA, Pyle R, Rosenbaum R, Cohen MR, Doiron B. Circuit Models of Low-Dimensional Shared Variability in Cortical Networks. Neuron 2018; 101:337-348.e4. [PMID: 30581012 DOI: 10.1016/j.neuron.2018.11.034] [Citation(s) in RCA: 78] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2018] [Revised: 10/25/2018] [Accepted: 11/19/2018] [Indexed: 12/19/2022]
Abstract
Trial-to-trial variability is a reflection of the circuitry and cellular physiology that make up a neuronal network. A pervasive yet puzzling feature of cortical circuits is that despite their complex wiring, population-wide shared spiking variability is low dimensional. Previous model cortical networks cannot explain this global variability, and rather assume it is from external sources. We show that if the spatial and temporal scales of inhibitory coupling match known physiology, networks of model spiking neurons internally generate low-dimensional shared variability that captures population activity recorded in vivo. Shifting spatial attention into the receptive field of visual neurons has been shown to differentially modulate shared variability within and between brain areas. A top-down modulation of inhibitory neurons in our network provides a parsimonious mechanism for this attentional modulation. Our work provides a critical link between observed cortical circuit structure and realistic shared neuronal variability and its modulation.
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Affiliation(s)
- Chengcheng Huang
- Department of Mathematics, University of Pittsburgh, Pittsburgh, PA, USA; Center for the Neural Basis of Cognition, Pittsburgh, PA, USA
| | - Douglas A Ruff
- Center for the Neural Basis of Cognition, Pittsburgh, PA, USA; Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA, USA
| | - Ryan Pyle
- Department of Applied and Computational Mathematics and Statistics, University of Notre Dame, Notre Dame, IN, USA
| | - Robert Rosenbaum
- Department of Applied and Computational Mathematics and Statistics, University of Notre Dame, Notre Dame, IN, USA; Interdisciplinary Center for Network Science and Applications, University of Notre Dame, Notre Dame, IN, USA
| | - Marlene R Cohen
- Center for the Neural Basis of Cognition, Pittsburgh, PA, USA; Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA, USA
| | - Brent Doiron
- Department of Mathematics, University of Pittsburgh, Pittsburgh, PA, USA; Center for the Neural Basis of Cognition, Pittsburgh, PA, USA.
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11
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Ruff DA, Brainard DH, Cohen MR. Neuronal population mechanisms of lightness perception. J Neurophysiol 2018; 120:2296-2310. [PMID: 30110233 PMCID: PMC6295546 DOI: 10.1152/jn.00906.2017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Revised: 08/08/2018] [Accepted: 08/08/2018] [Indexed: 11/22/2022] Open
Abstract
The way that humans and animals perceive the lightness of an object depends on its physical luminance as well as its surrounding context. While neuronal responses throughout the visual pathway are modulated by context, the relationship between neuronal responses and lightness perception is poorly understood. We searched for a neuronal mechanism of lightness by recording responses of neuronal populations in monkey primary visual cortex (V1) and area V4 to stimuli that produce a lightness illusion in humans, in which the lightness of a disk depends on the context in which it is embedded. We found that the way individual units encode the luminance (or equivalently for our stimuli, contrast) of the disk and its context is extremely heterogeneous. This motivated us to ask whether the population representation in either V1 or V4 satisfies three criteria: 1) disk luminance is represented with high fidelity, 2) the context surrounding the disk is also represented, and 3) the representations of disk luminance and context interact to create a representation of lightness that depends on these factors in a manner consistent with human psychophysical judgments of disk lightness. We found that populations of units in both V1 and V4 fulfill the first two criteria but that we cannot conclude that the two types of information in either area interact in a manner that clearly predicts human psychophysical measurements: the interpretation of our population measurements depends on how subsequent areas read out lightness from the population responses. NEW & NOTEWORTHY A core question in visual neuroscience is how the brain extracts stable representations of object properties from the retinal image. We searched for a neuronal mechanism of lightness perception by determining whether the responses of neuronal populations in primary visual cortex and area V4 could account for a lightness illusion measured using human psychophysics. Our results suggest that comparing psychophysics with population recordings will yield insight into neuronal mechanisms underlying a variety of perceptual phenomena.
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Affiliation(s)
- Douglas A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh , Pittsburgh, Pennsylvania
| | - David H Brainard
- Department of Psychology, University of Pennsylvania , Philadelphia, Pennsylvania
| | - Marlene R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh , Pittsburgh, Pennsylvania
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12
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Ni AM, Ruff DA, Alberts JJ, Symmonds J, Cohen MR. Learning and attention reveal a general relationship between population activity and behavior. Science 2018; 359:463-465. [PMID: 29371470 DOI: 10.1126/science.aao0284] [Citation(s) in RCA: 107] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2017] [Revised: 08/21/2017] [Accepted: 12/21/2017] [Indexed: 01/11/2023]
Abstract
Prior studies have demonstrated that correlated variability changes with cognitive processes that improve perceptual performance. We tested whether correlated variability covaries with subjects' performance-whether performance improves quickly with attention or slowly with perceptual learning. We found a single, consistent relationship between correlated variability and behavioral performance, regardless of the time frame of correlated variability change. This correlated variability was oriented along the dimensions in population space used by the animal on a trial-by-trial basis to make decisions. That subjects' choices were predicted by specific dimensions that were aligned with the correlated variability axis clarifies long-standing paradoxes about the relationship between shared variability and behavior.
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Affiliation(s)
- A M Ni
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260, USA
| | - D A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260, USA
| | - J J Alberts
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260, USA
| | - J Symmonds
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260, USA
| | - M R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15260, USA.
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13
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Ruff DA, Alberts JJ, Cohen MR. Relating normalization to neuronal populations across cortical areas. J Neurophysiol 2016; 116:1375-86. [PMID: 27358313 DOI: 10.1152/jn.00017.2016] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2016] [Accepted: 06/22/2016] [Indexed: 11/22/2022] Open
Abstract
Normalization, which divisively scales neuronal responses to multiple stimuli, is thought to underlie many sensory, motor, and cognitive processes. In every study where it has been investigated, neurons measured in the same brain area under identical conditions exhibit a range of normalization, ranging from suppression by nonpreferred stimuli (strong normalization) to additive responses to combinations of stimuli (no normalization). Normalization has been hypothesized to arise from interactions between neuronal populations, either in the same or different brain areas, but current models of normalization are not mechanistic and focus on trial-averaged responses. To gain insight into the mechanisms underlying normalization, we examined interactions between neurons that exhibit different degrees of normalization. We recorded from multiple neurons in three cortical areas while rhesus monkeys viewed superimposed drifting gratings. We found that neurons showing strong normalization shared less trial-to-trial variability with other neurons in the same cortical area and more variability with neurons in other cortical areas than did units with weak normalization. Furthermore, the cortical organization of normalization was not random: neurons recorded on nearby electrodes tended to exhibit similar amounts of normalization. Together, our results suggest that normalization reflects a neuron's role in its local network and that modulatory factors like normalization share the topographic organization typical of sensory tuning properties.
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Affiliation(s)
- Douglas A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania
| | - Joshua J Alberts
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania
| | - Marlene R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania
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14
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Oby ER, Perel S, Sadtler PT, Ruff DA, Mischel JL, Montez DF, Cohen MR, Batista AP, Chase SM. Extracellular voltage threshold settings can be tuned for optimal encoding of movement and stimulus parameters. J Neural Eng 2016; 13:036009. [PMID: 27097901 DOI: 10.1088/1741-2560/13/3/036009] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE A traditional goal of neural recording with extracellular electrodes is to isolate action potential waveforms of an individual neuron. Recently, in brain-computer interfaces (BCIs), it has been recognized that threshold crossing events of the voltage waveform also convey rich information. To date, the threshold for detecting threshold crossings has been selected to preserve single-neuron isolation. However, the optimal threshold for single-neuron identification is not necessarily the optimal threshold for information extraction. Here we introduce a procedure to determine the best threshold for extracting information from extracellular recordings. We apply this procedure in two distinct contexts: the encoding of kinematic parameters from neural activity in primary motor cortex (M1), and visual stimulus parameters from neural activity in primary visual cortex (V1). APPROACH We record extracellularly from multi-electrode arrays implanted in M1 or V1 in monkeys. Then, we systematically sweep the voltage detection threshold and quantify the information conveyed by the corresponding threshold crossings. MAIN RESULTS The optimal threshold depends on the desired information. In M1, velocity is optimally encoded at higher thresholds than speed; in both cases the optimal thresholds are lower than are typically used in BCI applications. In V1, information about the orientation of a visual stimulus is optimally encoded at higher thresholds than is visual contrast. A conceptual model explains these results as a consequence of cortical topography. SIGNIFICANCE How neural signals are processed impacts the information that can be extracted from them. Both the type and quality of information contained in threshold crossings depend on the threshold setting. There is more information available in these signals than is typically extracted. Adjusting the detection threshold to the parameter of interest in a BCI context should improve our ability to decode motor intent, and thus enhance BCI control. Further, by sweeping the detection threshold, one can gain insights into the topographic organization of the nearby neural tissue.
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Affiliation(s)
- Emily R Oby
- Center for the Neural Basis of Cognition, University of Pittsburgh and Carnegie Mellon University, Pittsburgh, PA 15213, USA. Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15261, USA
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15
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Abstract
Attending to a stimulus modulates the responses of sensory neurons that represent features of that stimulus, a phenomenon named "feature attention." For example, attending to a stimulus containing upward motion enhances the responses of upward-preferring direction-selective neurons in the middle temporal area (MT) and suppresses the responses of downward-preferring neurons, even when the attended stimulus is outside of the spatial receptive fields of the recorded neurons (Treue S, Martinez-Trujillo JC. Nature 399: 575-579, 1999). This modulation renders the representation of sensory information across a neuronal population more selective for the features present in the attended stimulus (Martinez-Trujillo JC, Treue S. Curr Biol 14: 744-751, 2004). We hypothesized that if feature attention modulates neurons according to their tuning preferences, it should also be sensitive to their tuning strength, which is the magnitude of the difference in responses to preferred and null stimuli. We measured how the effects of feature attention on MT neurons in rhesus monkeys (Macaca mulatta) depended on the relationship between features-in our case, direction of motion and binocular disparity-of the attended stimulus and a neuron's tuning for those features. We found that, as for direction, attention to stimuli containing binocular disparity cues modulated the responses of MT neurons and that the magnitude of the modulation depended on both a neuron's tuning preferences and its tuning strength. Our results suggest that modulation by feature attention may depend not just on which features a neuron represents but also on how well the neuron represents those features.
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Affiliation(s)
- Douglas A Ruff
- Department of Neurobiology, Harvard Medical School, Boston, Massachusetts; and Program in Neuroscience, Harvard Medical School, Boston, Massachusetts
| | - Richard T Born
- Department of Neurobiology, Harvard Medical School, Boston, Massachusetts; and
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Ruff DA, Cohen MR. Attention can either increase or decrease spike count correlations in visual cortex. Nat Neurosci 2014; 17:1591-7. [PMID: 25306550 PMCID: PMC4446056 DOI: 10.1038/nn.3835] [Citation(s) in RCA: 128] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2014] [Accepted: 09/12/2014] [Indexed: 12/11/2022]
Abstract
Visual attention enhances the responses of visual neurons that encode the attended location. Several recent studies showed that attention also decreases correlations between fluctuations in the responses of pairs of neurons (termed spike count correlation or rSC). The previous results are consistent with two hypotheses. Attention–related changes in rate and rSC might be linked (perhaps through a common mechanism), so that attention always decreases rSC. Alternately, attention might either increase or decrease rSC, possibly depending on the role the neurons play in the behavioral task. We recorded simultaneously from dozens of neurons in area V4 while monkeys performed a discrimination task. We found strong evidence in favor of the second hypothesis, showing that attention can flexibly increase or decrease correlations, depending on whether the neurons provide evidence for the same or opposite perceptual decisions. These results place important constraints on models of the neuronal mechanisms underlying cognitive factors.
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Affiliation(s)
- Douglas A Ruff
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
| | - Marlene R Cohen
- Department of Neuroscience and Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
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17
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Abstract
Neurons in sensory cortical areas are tuned to multiple dimensions, or features, of their sensory space. Understanding how single neurons represent multiple features is of great interest for determining the informative dimensions of the neurons' response, the decoding algorithms appropriate for extracting this information from the neuronal population, and for determining where specific transformations occur along the visual hierarchy. Despite the established role of cortical area MT in judgments of motion and depth, it is not known how individual neurons jointly encode the two dimensions. We investigated the joint tuning of individual MT neurons for two visual features: direction of motion and binocular disparity, an important depth cue. We found that a separable, multiplicative combination of tuning for the two features can account for more than 90% of the variance in the joint tuning function for over 91% of MT neurons. These results suggest 1) that each feature can be read out independently from MT by simply averaging across the population without regard to the other feature and 2) that the inseparable representations seen in subsequent areas, such as MST, must be computed beyond MT. Intriguingly, we found that the remaining nonseparable component of the joint tuning function often manifested as small but systematic changes in the neurons' preferences for one feature as the other one was varied. We believe this reflects the local columnar organization of tuning for direction and binocular disparity in MT, indicating that joint tuning may provide a new tool with which to probe functional architecture.
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18
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Ruff DA, Marrett S, Heekeren HR, Bandettini PA, Ungerleider LG. Complementary roles of systems representing sensory evidence and systems detecting task difficulty during perceptual decision making. Front Neurosci 2010; 4:190. [PMID: 21173881 PMCID: PMC2996169 DOI: 10.3389/fnins.2010.00190] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2010] [Accepted: 10/24/2010] [Indexed: 11/13/2022] Open
Abstract
Perceptual decision making is a multi-stage process where incoming sensory information is used to select one option from several alternatives. Researchers typically have adopted one of two conceptual frameworks to define the criteria for determining whether a brain region is involved in decision computations. One framework, building on single-unit recordings in monkeys, posits that activity in a region involved in decision making reflects the accumulation of evidence toward a decision threshold, thus showing the lowest level of BOLD signal during the hardest decisions. The other framework instead posits that activity in a decision-making region reflects the difficulty of a decision, thus showing the highest level of BOLD signal during the hardest decisions. We had subjects perform a face detection task on degraded face images while we simultaneously recorded BOLD activity. We searched for brain regions where changes in BOLD activity during this task supported either of these frameworks by calculating the correlation of BOLD activity with reaction time - a measure of task difficulty. We found that the right supplementary eye field, right frontal eye field, and right inferior frontal gyrus had increased activity relative to baseline that positively correlated with reaction time, while the left superior frontal sulcus and left middle temporal gyrus had decreased activity relative to baseline that negatively correlated with reaction time. We propose that a simple mechanism that scales a region's activity based on task demands can explain our results.
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Affiliation(s)
- Douglas A. Ruff
- Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of HealthBethesda, MD, USA
| | - Sean Marrett
- Functional Magnetic Resonance Imaging Core Facility, National Institute of Mental Health, National Institutes of HealthBethesda, MD, USA
| | - Hauke R. Heekeren
- Department of Psychology and Education, Freie Universität BerlinBerlin, Germany
| | - Peter A. Bandettini
- Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of HealthBethesda, MD, USA
- Functional Magnetic Resonance Imaging Core Facility, National Institute of Mental Health, National Institutes of HealthBethesda, MD, USA
| | - Leslie G. Ungerleider
- Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of HealthBethesda, MD, USA
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Mur M, Ruff DA, Bodurka J, Bandettini PA, Kriegeskorte N. Face-identity change activation outside the face system: "release from adaptation" may not always indicate neuronal selectivity. ACTA ACUST UNITED AC 2010; 20:2027-42. [PMID: 20051364 DOI: 10.1093/cercor/bhp272] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
Face recognition is a complex cognitive process that requires distinguishable neuronal representations of individual faces. Previous functional magnetic resonance imaging (fMRI) studies using the "fMRI-adaptation" technique have suggested the existence of face-identity representations in face-selective regions, including the fusiform face area (FFA). Here, we present face-identity adaptation findings that are not well explained in terms of face-identity representations. We performed blood-oxygen level-dependent (BOLD) fMRI measurements, while participants viewed familiar faces that were shown repeatedly throughout the experiment. We found decreased activation for repeated faces in face-selective regions, as expected based on previous studies. However, we found similar effects in regions that are not face-selective, including the parahippocampal place area (PPA) and early visual cortex (EVC). These effects were present for exact-image (same view and lighting) as well as different-image (different view and/or lighting) repetition, but more widespread for exact-image repetition. Given the known functional properties of PPA and EVC, it appears unlikely that they contain domain-specific face-identity representations. Alternative interpretations include general attentional effects and carryover of activation from connected regions. These results remind us that fMRI stimulus-change effects can have a range of causes and do not provide conclusive evidence for a neuronal representation of the changed stimulus property.
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Affiliation(s)
- Marieke Mur
- Section on Functional Imaging Methods, Laboratory of Brain and Cognition, National Institute of Mental Health, National Institutes of Health, Bethesda, MD 20892, USA.
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Kriegeskorte N, Mur M, Ruff DA, Kiani R, Bodurka J, Esteky H, Tanaka K, Bandettini PA. Matching categorical object representations in inferior temporal cortex of man and monkey. Neuron 2009; 60:1126-41. [PMID: 19109916 DOI: 10.1016/j.neuron.2008.10.043] [Citation(s) in RCA: 779] [Impact Index Per Article: 51.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2008] [Revised: 08/19/2008] [Accepted: 10/13/2008] [Indexed: 11/26/2022]
Abstract
Inferior temporal (IT) object representations have been intensively studied in monkeys and humans, but representations of the same particular objects have never been compared between the species. Moreover, IT's role in categorization is not well understood. Here, we presented monkeys and humans with the same images of real-world objects and measured the IT response pattern elicited by each image. In order to relate the representations between the species and to computational models, we compare response-pattern dissimilarity matrices. IT response patterns form category clusters, which match between man and monkey. The clusters correspond to animate and inanimate objects; within the animate objects, faces and bodies form subclusters. Within each category, IT distinguishes individual exemplars, and the within-category exemplar similarities also match between the species. Our findings suggest that primate IT across species may host a common code, which combines a categorical and a continuous representation of objects.
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Affiliation(s)
- Nikolaus Kriegeskorte
- Section on Functional Imaging Methods, Laboratory of Brain and Cognition, National Institute of Mental Health, NIH, Bethesda, MD 20892-1148, USA.
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21
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Swaddle JP, Ruff DA, Page LC, Frame AM, Long VA. A test of receiver perceptual performance: European starlings' ability to detect asymmetry in a naturalistic trait. Anim Behav 2008. [DOI: 10.1016/j.anbehav.2008.05.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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22
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Black HR, Elliott WJ, Weber MA, Frishman WH, Strom JA, Liebson PR, Hwang CT, Ruff DA, Montoro R, DeQuattro V, Zhang D, Schleman MM, Klibaner MI. One-year study of felodipine or placebo for stage 1 isolated systolic hypertension. Hypertension 2001; 38:1118-23. [PMID: 11711508 DOI: 10.1161/hy1101.095000] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Asubstantial number of older hypertensive patients have stage 1 isolated systolic hypertension (systolic blood pressure between 140 and 159 mm Hg and diastolic blood pressure <90 mm Hg), but there are currently no data showing that drug treatment is effective, safe, and/or beneficial. To compare the effects of active treatment compared with placebo on blood pressure, left ventricular hypertrophy, and quality of life among older stage 1 isolated systolic hypertensive patients, a randomized, double-blind, parallel-group, multicenter clinical trial comparing felodipine (2.5, 5, or 10 mg once daily) and matching placebo was performed in 171 patients (49% male, average age 66+/-7 years, with 49% white and 30% Hispanic) with a baseline blood pressure of 149+/-7/83+/-6 mm Hg. During 52 weeks of treatment, patients randomized to active treatment achieved significantly lower blood pressures (137.0+/-11.7/80.2+/-7.6 mm Hg for extended-release felodipine versus 147.5+/-16.0/83.5+/-9.7 mm Hg for placebo, P<0.01 for each), a reduced incidence of left ventricular hypertrophy (7% for extended release felodipine versus 24% for placebo, P<0.04), and improved quality of life (change in Psychological General Well-Being index, 3.0+/-6.8 for extended-release felodipine versus -0.8+/-10.3 for placebo, P<0.01) versus baseline. There were no clinically significant differences between treatments in tolerability or adverse effects. Stage 1 isolated systolic hypertension can be effectively and safely treated pharmacologically. Treatment reduced progression to the higher stages of hypertension, reduced the incidence of left ventricular hypertrophy, and improved an overall measure of the quality of life. Larger and longer studies will be needed to document any long-term reduction in cardiovascular event rates associated with treating stage 1 systolic hypertension.
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Affiliation(s)
- H R Black
- Department of Preventive Medicine, Rush Medical College of Rush University at Rush-Presbyterian-Saint Luke's Medical Center, Chicago, Illinois, USA.
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23
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Neutel JM, Buckalew V, Chrysant SG, Mroczek WJ, Ruff DA, Weber M. Efficacy and tolerability of tasosartan, a novel angiotensin II receptor blocker: results from a 10-week, double-blind, placebo-controlled, dose-titration study. Tasosartan Investigators Group. Am Heart J 1999; 137:118-25. [PMID: 9878944 DOI: 10.1016/s0002-8703(99)70467-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
BACKGROUND Angiotensin II receptor antagonists are selective blockers of the renin-angiotensin system and represent an alternative to angiotensin-converting enzyme inhibitors in the treatment of hypertension. Tasosartan is a newly developed nonpeptide AT1 receptor blocker. METHODS AND RESULTS In this double-blind, randomized, dose-titration, multicenter trial, tasosartan and placebo were compared in patients with stage I and stage II hypertension. A prequalification washout period (antihypertensive medications withdrawn) and a 2-week qualification period (patients received single-blind placebo) preceded a 10-week, double-blind treatment period. The patients received either 50 mg tasosartan (n = 132) or placebo (n = 130) once per day and were evaluated once per week. The dose of tasosartan was increased at 3-week intervals to 100 mg and then to 200 mg if the mean sitting diastolic blood pressure (SiDBP) exceeded 90 mm Hg. Compared with placebo, tasosartan produced significantly (P <.05) greater reductions in both SiDBP (-9.4 +/- 0.7 vs -2.0 +/- 0.7 mm Hg) and sitting systolic blood pressure (SBP) (-12.2 +/- 1.2 vs +0.4 +/- 1.2 mm Hg). The rate of response (SiDBP </=90 mm Hg or a decrease from baseline of >/=10 mm Hg) was significantly (P <.05) greater in the tasosartan group than in the placebo group (55% vs 19%). The mean 24-hour blood pressure reduction with tasosartan was -12.6 +/- 0. 9/-8.1 +/- 0.6, significantly greater (P <.05) than the reduction with placebo (+0.6 +/- 0.9/+0.5 +/- 0.6 mm Hg). The trough-to-peak ratio (determined from the ambulatory data) was 0.66 for DBP and 0. 72 for SBP for the tasosartan treatment group, demonstrating 24-hour efficacy with once-a-day administration. The safety profile of tasosartan was similar to placebo. CONCLUSIONS These results demonstrate that tasosartan at 50 to 200 mg given once a day over a titration period of 10 weeks was effective and safe in the treatment of essential hypertension.
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