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Chaiban C, Robinson TP, Fèvre EM, Ogola J, Akoko J, Gilbert M, Vanwambeke SO. Early intensification of backyard poultry systems in the tropics: a case study. Animal 2020; 14:2387-2396. [PMID: 32576312 PMCID: PMC7538343 DOI: 10.1017/s175173112000110x] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Revised: 04/06/2020] [Accepted: 05/04/2020] [Indexed: 12/24/2022] Open
Abstract
Poultry production is an important way of enhancing the livelihoods of rural populations, especially in low- and middle-income countries (LMICs). As poultry production in LMICs remains dominated by backyard systems with low inputs and low outputs, considerable yield gaps exist. Intensification can increase poultry productivity, production and income. This process is relatively recent in LMICs compared to high-income countries. The management practices and the constraints faced by smallholders trying to scale-up their production, in the early stages of intensification, are poorly understood and described. We thus investigated the features of the small-scale commercial chicken sector in a rural area distant from major production centres. We surveyed 111 commercial chicken farms in Kenya in 2016. We targeted farms that sell the majority of their production, owning at least 50 chickens, partly or wholly confined and provided with feeds. We developed a typology of semi-intensive farms. Farms were found mainly to raise dual-purpose chickens of local and improved breeds, in association with crops and were not specialized in any single product or market. We identified four types of semi-intensive farms that were characterized based on two groups of variables related to intensification and accessibility: (i) remote, small-scale old farms, with small flocks, growing a lot of their own feed; (ii) medium-scale, old farms with a larger flock and well located in relation to markets and (iii) large-scale recently established farms, with large flocks, (iii-a) well located and buying chicks from third-party providers and (iii-b) remotely located and hatching their own chicks. The semi-intensive farms we surveyed were highly heterogeneous in terms of size, age, accessibility, management, opportunities and challenges. Farm location affects market access and influences the opportunities available to farmers, resulting in further diversity in farm profiles. The future of these semi-intensive farms could be compromised by several factors, including the competition with large-scale intensive farmers and with importations. Our study suggests that intensification trajectories in rural areas of LMICs are potentially complex, diverse and non-linear. A better understanding of intensification trajectories should, however, be based on longitudinal data. This could, in turn, help designing interventions to support small-scale farmers.
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Affiliation(s)
- C. Chaiban
- Georges Lemaître Centre for Earth and Climate Research, Earth and Life Institute, Université catholique de Louvain, UCLouvain, 1348Louvain-la-Neuve, Belgium
- Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, 1050Brussels, Belgium
| | - T. P. Robinson
- Livestock Information, Sector Analysis and Policy Branch (AGAL), Food and Agriculture Organization of the United Nations (FAO), Viale delle Terme di Caracalla, 00153Rome, Italy
| | - E. M. Fèvre
- International Livestock Research Institute (ILRI), 00100Nairobi, Kenya
- Institute of Infection and Global Health (IGH), University of Liverpool, LiverpoolL7 3EA, UK
| | - J. Ogola
- International Livestock Research Institute (ILRI), 00100Nairobi, Kenya
- County Directorate of Veterinary Services, Bungoma County 50200, Kenya
| | - J. Akoko
- International Livestock Research Institute (ILRI), 00100Nairobi, Kenya
| | - M. Gilbert
- Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, 1050Brussels, Belgium
- Fonds National de la Recherche Scientifique (FNRS), 1000Brussels, Belgium
| | - S. O. Vanwambeke
- Georges Lemaître Centre for Earth and Climate Research, Earth and Life Institute, Université catholique de Louvain, UCLouvain, 1348Louvain-la-Neuve, Belgium
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de Glanville WA, Thomas LF, Cook EAJ, Bronsvoort BMDC, Wamae NC, Kariuki S, Fèvre EM. Household socio-economic position and individual infectious disease risk in rural Kenya. Sci Rep 2019; 9:2972. [PMID: 30814567 PMCID: PMC6393457 DOI: 10.1038/s41598-019-39375-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Accepted: 01/22/2019] [Indexed: 11/21/2022] Open
Abstract
The importance of household socio-economic position (SEP) in shaping individual infectious disease risk is increasingly recognised, particularly in low income settings. However, few studies have measured the extent to which this association is consistent for the range of pathogens that are typically endemic among the rural poor in the tropics. This cross-sectional study assessed the relationship between SEP and human infection within a single community in western Kenya using a set of pathogens with diverse transmission routes. The relationships between household SEP and individual infection with Plasmodium falciparum, hookworm (Ancylostoma duodenale and/or Necator americanus), Entamoeba histolytica/dispar, Mycobacterium tuberculosis, and HIV, and co-infections between hookworm, P. falciparum and E. histolytica/dispar, were assessed using multivariable logistic and multinomial regression. Individuals in households with the lowest SEP were at greatest risk of infection with P. falciparum, hookworm and E. histolytica/dispar, as well as co-infection with each pathogen. Infection with M. tuberculosis, by contrast, was most likely in individuals living in households with the highest SEP. There was no evidence of a relationship between individual HIV infection and household SEP. We demonstrate the existence of a household socio-economic gradient within a rural farming community in Kenya which impacts upon individual infectious disease risk. Structural adjustments that seek to reduce poverty, and therefore the socio-economic inequalities that exist in this community, would be expected to substantially reduce overall infectious disease burden. However, policy makers and researchers should be aware that heterogeneous relationships can exist between household SEP and infection risk for different pathogens in low income settings.
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Affiliation(s)
- W A de Glanville
- Centre for Immunity, Infection and Evolution, Institute for Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Ashworth Laboratories, West Mains Road, Edinburgh, EH9 3JT, UK.
- International Livestock Research Institute, Old Naivasha Road, PO BOX 30709, 00100, Nairobi, Kenya.
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, G12 8QQ, United Kingdom.
| | - L F Thomas
- Centre for Immunity, Infection and Evolution, Institute for Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Ashworth Laboratories, West Mains Road, Edinburgh, EH9 3JT, UK
- International Livestock Research Institute, Old Naivasha Road, PO BOX 30709, 00100, Nairobi, Kenya
| | - E A J Cook
- Centre for Immunity, Infection and Evolution, Institute for Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Ashworth Laboratories, West Mains Road, Edinburgh, EH9 3JT, UK
- International Livestock Research Institute, Old Naivasha Road, PO BOX 30709, 00100, Nairobi, Kenya
| | - B M de C Bronsvoort
- The Royal (Dick) School of Veterinary Studies, University of Edinburgh, Roslin, Midlothian, EH25 9RG, UK
- Roslin Institute, The Royal (Dick) School of Veterinary Studies, University of Edinburgh, Roslin, Midlothian, EH25 9RG, UK
| | - N C Wamae
- School of Pharmacy and Health Sciences, United States International University-Africa, PO Box 14634-01000, Nairobi, Kenya
| | - S Kariuki
- Centre for Microbiology Research, Kenya Medical Research Institute, PO Box 19464-00200, Nairobi, Kenya
| | - E M Fèvre
- International Livestock Research Institute, Old Naivasha Road, PO BOX 30709, 00100, Nairobi, Kenya.
- Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, CH64 7TE, UK.
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Ogola J, Fèvre EM, Gitau GK, Christley R, Muchemi G, de Glanville WA. The topology of between-herd cattle contacts in a mixed farming production system in western Kenya. Prev Vet Med 2018; 158:43-50. [PMID: 30220395 PMCID: PMC6152584 DOI: 10.1016/j.prevetmed.2018.06.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2017] [Revised: 04/19/2018] [Accepted: 06/26/2018] [Indexed: 11/18/2022]
Abstract
Degree of farm contact and the distances between farms were negatively correlated. Disease control and surveillance to consider between farms contacts in the villages. Heterogeneities in between farm contact may limit infectious disease spread.
In many livestock production systems in sub-Saharan Africa, cattle are owned by individual keepers but regularly mix with animals from other herds while grazing communal land, at watering points or through the use of shared bulls for breeding and ploughing. Such contacts may have important implications for disease transmission and control but are not well documented. We describe between-farm contacts in Kimilili sub-county of Bungoma County, a mixed farming area of predominately smallholder farmers. Between-farm contacts occurring during grazing or at shared water points over the past four weeks were captured in seven randomly selected villages using a photo-elicitation tool. The use of shared bulls for breeding and ploughing and cattle introductions from farms within the same village in the past 12 months were also captured. Contact networks were constructed for each contact type in each village. In total 329 farms were included in the study. Networks resembled undirected scale-free graphs with a network density ranging between 9.6 and 14.0. Between 45.6 and 100% of the farms in each study village had been in contact over the past four weeks through grazing and watering contacts. Between 88.9 and 100% were considered to have been in contact over the past 12 months. The topology of the networks was heterogeneous, with some farms exhibiting a high degree of contact. The degree of farm contact and distances between farms were negatively correlated (Pearson correlation coefficient range −0.2 to −0.4). Effective disease control and surveillance must take into consideration the frequency and range of contacts that occur between farms within a single village. Cattle keepers are highly interconnected and pathogens that are transmitted through direct or indirect animal contact would be expected to spread rapidly in the study system. However, the observed heterogeneity in between-farm contact may present opportunities for interventions to be targeted to particular herds to limit infectious disease spread.
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Affiliation(s)
- J Ogola
- Department of Public Health Pharmacology and Toxicology, University of Nairobi, PO Box 9053-00625, Nairobi, Kenya.
| | - E M Fèvre
- International Livestock Research Institute, PO Box 30709-00100, Nairobi, Kenya; Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, CH64 7TE, UK.
| | - G K Gitau
- Department of Clinical Studies, University of Nairobi, PO Box 29053-00625 Nairobi, Kenya.
| | - R Christley
- Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, CH64 7TE, UK.
| | - G Muchemi
- Department of Public Health Pharmacology and Toxicology, University of Nairobi, PO Box 9053-00625, Nairobi, Kenya.
| | - W A de Glanville
- International Livestock Research Institute, PO Box 30709-00100, Nairobi, Kenya; Centre for Infection, Immunity & Evolution, School of Biological Sciences, University of Edinburgh, Ashworth Laboratories, Kings Buildings, West Mains Rd, Edinburgh, EH9 3JT, UK.
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Browne AS, Fèvre EM, Kinnaird M, Muloi DM, Wang CA, Larsen PS, O'Brien T, Deem SL. Serosurvey of Coxiella burnetii (Q fever) in Dromedary Camels (Camelus dromedarius) in Laikipia County, Kenya. Zoonoses Public Health 2017; 64:543-549. [PMID: 28176495 PMCID: PMC5655913 DOI: 10.1111/zph.12337] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2016] [Indexed: 12/19/2022]
Abstract
Dromedary camels (Camelus dromedarius) are an important protein source for people in semi-arid and arid regions of Africa. In Kenya, camel populations have grown dramatically in the past few decades resulting in the potential for increased disease transmission between humans and camels. An estimated four million Kenyans drink unpasteurized camel milk, which poses a disease risk. We evaluated the seroprevalence of a significant zoonotic pathogen, Coxiella burnetii (Q fever), among 334 camels from nine herds in Laikipia County, Kenya. Serum testing revealed 18.6% positive seroprevalence of Coxiella burnetii (n = 344). Increasing camel age was positively associated with C. burnetii seroprevalence (OR = 5.36). Our study confirmed that camels living in Laikipia County, Kenya, have been exposed to the zoonotic pathogen, C. burnetii. Further research to evaluate the role of camels in disease transmission to other livestock, wildlife and humans in Kenya should be conducted.
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Affiliation(s)
- A. S. Browne
- Molecular Epidemiology and Public Health LaboratoryHopkirk Research InstituteMassey UniversityPalmerston NorthNZ
| | - E. M. Fèvre
- Institute of Infection and Global HealthUniversity of LiverpoolNestonUK
- International Livestock Research InstituteNairobiKE
| | | | - D. M. Muloi
- Centre for Immunity, Infection and EvolutionUniversity of EdinburghEdinburghUK
| | - C. A. Wang
- College of Veterinary MedicineNorth Carolina State UniversityRaleighNCUSA
| | - P. S. Larsen
- Department of EpidemiologySchool of Public HealthUniversity of MichiganAnn ArborMIUSA
| | - T. O'Brien
- Mpala Research CentreNanyukiKE
- Wildlife Conservation SocietyGlobal Conservation ProgramsBronx, New YorkNYUSA
| | - S. L. Deem
- Saint Louis Zoo Institute for Conservation MedicineSaint LouisMOUSA
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Njeru J, Tomaso H, Mertens K, Henning K, Wareth G, Heller R, Kariuki S, Fèvre EM, Neubauer H, Pletz MW. Serological evidence of Francisella tularensis in febrile patients seeking treatment at remote hospitals, northeastern Kenya, 2014-2015. New Microbes New Infect 2017; 19:62-66. [PMID: 28721222 PMCID: PMC5498284 DOI: 10.1016/j.nmni.2017.05.015] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2017] [Revised: 05/16/2017] [Accepted: 05/29/2017] [Indexed: 11/02/2022] Open
Abstract
Tularaemia is a highly contagious infectious zoonosis caused by the bacterial agent Francisella tularensis. The aim of this study was to investigate the presence of antibodies to F. tularensis in febrile patients in northeastern Kenya. During 2014-2015, 730 patients were screened for anti-F. tularensis antibodies using a combination of ELISA and Western blot. Twenty-seven (3.7%) individuals were positive for F. tularensis. Tularaemia was not suspected by the treating clinicians in any of them. Our results suggest that tularaemia may be present in Kenya but remain unreported, and emphasizes the need for local clinicians to broaden their diagnostic repertoire when evaluating patients with undifferentiated febrile illness.
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Affiliation(s)
- J Njeru
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler-Institute, Jena, Germany.,Centre for Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany.,Centre for Microbiology Research, Kenya Medical Research Institute, Nairobi, Kenya
| | - H Tomaso
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler-Institute, Jena, Germany
| | - K Mertens
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler-Institute, Jena, Germany
| | - K Henning
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler-Institute, Jena, Germany
| | - G Wareth
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler-Institute, Jena, Germany.,Faculty of Veterinary Medicine, Benha University, Moshtohor, Egypt
| | - R Heller
- Institute for Molecular Cell Biology, Center for Molecular Biomedicine, Friedrich Schiller University of Jena, Jena, Germany
| | - S Kariuki
- Centre for Microbiology Research, Kenya Medical Research Institute, Nairobi, Kenya
| | - E M Fèvre
- Institute of Infection and Global Health, University of Liverpool, Liverpool, UK.,International Livestock Research Institute, Nairobi, Kenya
| | - H Neubauer
- Institute of Bacterial Infections and Zoonoses, Friedrich-Loeffler-Institute, Jena, Germany
| | - M W Pletz
- Centre for Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany
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6
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Makau DN, Gitau GK, Muchemi GK, Thomas LF, Cook EAJ, Wardrop NA, Fèvre EM, de Glanville WA. Environmental predictors of bovine Eimeria infection in western Kenya. Trop Anim Health Prod 2017; 49:409-416. [PMID: 28054227 PMCID: PMC5253148 DOI: 10.1007/s11250-016-1209-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2016] [Accepted: 12/05/2016] [Indexed: 11/24/2022]
Abstract
Eimeriosis is caused by a protozoan infection affecting most domestic animal species. Outbreaks in cattle are associated with various environmental factors in temperate climates but limited work has been done in tropical settings. The objective of this work was to determine the prevalence and environmental factors associated with bovine Eimeria spp. infection in a mixed farming area of western Kenya. A total of 983 cattle were sampled from 226 cattle-keeping households. Faecal samples were collected directly from the rectum via digital extraction and analysed for the presence of Eimeria spp. infection using the MacMaster technique. Individual and household level predictors of infection were explored using mixed effects logistic regression. The prevalence of individual animal Eimeria infection was 32.8% (95% CI 29.9-35.9). A positive linear relationship was found between risk of Eimeria infection and increasing temperature (OR = 1.4, 95% CI 1.06-1.86) and distance to areas at risk of flooding (OR = 1.49, 95% CI 1.17-1.91). There was weak evidence of non-linear relationship between Eimeria infection and the proportion of the area around a household that was classified as swamp (OR = 1.12, 95% CI 0.87-1.44; OR (quadratic term) = 0.85, 95% CI 0.73-1.00), and the sand content of the soil (OR = 1.18, 95% CI 0.91-1.53; OR (quadratic term) = 1.1, 95% CI 0.99-1.23). The risk of animal Eimeria spp. infection is influenced by a number of climatic and soil-associated conditions.
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Affiliation(s)
- D N Makau
- Department of Public Health Pharmacology and Toxicology, Faculty of Veterinary Medicine, University of Nairobi, Nairobi, PO BOX 29053-00625, Kenya.
| | - G K Gitau
- Department of Clinical Studies, Faculty of Veterinary Medicine, University of Nairobi, Nairobi, PO BOX 29053-00625, Kenya
| | - G K Muchemi
- Department of Public Health Pharmacology and Toxicology, Faculty of Veterinary Medicine, University of Nairobi, Nairobi, PO BOX 29053-00625, Kenya
| | - L F Thomas
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709-00100, Nairobi, Kenya
- Centre for Immunity, Infection and Evolution, Institute for Immunology and Infection Research, School of Biological Sciences, Kings Buildings, University of Edinburgh, West Mains Road, Edinburgh, EH9 3JT, UK
| | - E A J Cook
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709-00100, Nairobi, Kenya
- Centre for Immunity, Infection and Evolution, Institute for Immunology and Infection Research, School of Biological Sciences, Kings Buildings, University of Edinburgh, West Mains Road, Edinburgh, EH9 3JT, UK
| | - N A Wardrop
- Geography and Environment, University of Southampton, Highfield Campus, University Road, Southampton, SO17 1BJ, UK
| | - E M Fèvre
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709-00100, Nairobi, Kenya
- Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, CH64 7TE, UK
| | - W A de Glanville
- International Livestock Research Institute, Old Naivasha Road, PO Box 30709-00100, Nairobi, Kenya.
- Centre for Immunity, Infection and Evolution, Institute for Immunology and Infection Research, School of Biological Sciences, Kings Buildings, University of Edinburgh, West Mains Road, Edinburgh, EH9 3JT, UK.
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8
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Dominguez-Salas P, Alarcón P, Häsler B, Dohoo IR, Colverson K, Kimani-Murage EW, Alonso S, Ferguson E, Fèvre EM, Rushton J, Grace D. Nutritional characterisation of low-income households of Nairobi: socioeconomic, livestock and gender considerations and predictors of malnutrition from a cross-sectional survey. BMC Nutr 2016. [DOI: 10.1186/s40795-016-0086-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Robinson TP, Bu DP, Carrique-Mas J, Fèvre EM, Gilbert M, Grace D, Hay SI, Jiwakanon J, Kakkar M, Kariuki S, Laxminarayan R, Lubroth J, Magnusson U, Thi Ngoc P, Van Boeckel TP, Woolhouse MEJ. Antibiotic resistance is the quintessential One Health issue. Trans R Soc Trop Med Hyg 2016; 110:377-80. [PMID: 27475987 PMCID: PMC4975175 DOI: 10.1093/trstmh/trw048] [Citation(s) in RCA: 376] [Impact Index Per Article: 47.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2016] [Revised: 06/28/2016] [Accepted: 06/30/2016] [Indexed: 11/21/2022] Open
Affiliation(s)
- T P Robinson
- International Livestock Research Institute, Nairobi, Kenya
| | - D P Bu
- Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
| | - J Carrique-Mas
- Oxford University Clinical Research Unit, Wellcome Trust Major Overseas Programme, Ho Chi Minh City, Vietnam
| | - E M Fèvre
- Institute of Infection and Global Health, University of Liverpool, Liverpool, UK
| | - M Gilbert
- Université Libre de Bruxelles, Brussels, Belgium
| | - D Grace
- International Livestock Research Institute, Nairobi, Kenya
| | - S I Hay
- Institute for Health Metrics and Evaluation, University of Washington, Seattle, USA Oxford Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Oxford, UK
| | - J Jiwakanon
- Research Group for Preventive Technology in Livestock, Faculty of Veterinary Medicine, Khon Kaen University, Khon Kaen, Thailand
| | - M Kakkar
- Public Health Foundation of India, Delhi, India
| | - S Kariuki
- Kenya Medical Research Institute, Nairobi, Kenya
| | - R Laxminarayan
- Center for Disease Dynamics, Economics and Policy, Washington DC, USA
| | - J Lubroth
- Food and Agriculture Organization of the United Nations, Rome, Italy
| | - U Magnusson
- Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - P Thi Ngoc
- National Institute of Veterinary Research, Hanoi, Vietnam
| | - T P Van Boeckel
- Institute of Integrative Biology and Center for Adaptation to a Changing Environment, Swiss Federal Institute of Technology, Zurich, Switzerland
| | - M E J Woolhouse
- Centre for Immunity, Infection & Evolution, University of Edinburgh, Edinburgh, UK
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Fèvre EM, Tilley A, Picozzi K, Fyfe J, Anderson I, Magona JW, Shaw DJ, Eisler MC, Welburn SC. Central point sampling from cattle in livestock markets in areas of human sleeping sickness. Acta Trop 2006; 97:229-32. [PMID: 16387279 DOI: 10.1016/j.actatropica.2005.11.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2005] [Revised: 11/16/2005] [Accepted: 11/29/2005] [Indexed: 12/01/2022]
Abstract
We present the results of a study to determine the value of central point sampling in cattle markets as a means of estimating the trypanosomiasis (T. brucei s.l.) prevalence in the surrounding landscape in Uganda. We find that in the epidemic area studied, central point sampling is a good predictor of prevalence in surrounding villages, but not in endemic areas. We also find that animals infected with trypanosomiasis are more likely to be brought for sale in livestock markets in endemic areas; we discuss these results in relation to the prevention of the spread of sleeping sickness.
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Affiliation(s)
- E M Fèvre
- Centre for Tropical Veterinary Medicine, University of Edinburgh, Easter Bush, Roslin, Midlothian EH25 9RG, UK.
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Abstract
Human African trypanosomiasis (HAT), or sleeping sickness, describes not one but two discrete diseases: that caused by Trypanosoma brucei rhodesiense and that caused by T. b. gambiense. The Gambian form is currently a major public health problem over vast areas of central and western Africa, while the zoonotic, Rhodesian form continues to present a serious health risk in eastern and southern Africa. The two parasites cause distinct clinical manifestations, and there are significant differences in the epidemiology of the diseases caused. We discuss the differences between the diseases caused by the two parasites, with an emphasis on disease burden, reservoir hosts, transmission, diagnosis, treatment and control. We analyse how these differences impacted on historical disease control trends and how they can inform contemporary treatment and control options. We consider the optimal ways in which to devise HAT control policies in light of the differing biology and epidemiology of the parasites, and emphasise, in particular, the wider aspects of control policy, outlining the responsibilities of individuals, governments and international organisations in control programmes.
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Affiliation(s)
- E M Fèvre
- Centre for Infectious Diseases, Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Roslin, Midlothian, EH25 9RG, UK
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Odiit M, Coleman PG, Liu WC, McDermott JJ, Fèvre EM, Welburn SC, Woolhouse MEJ. Quantifying the level of under-detection of Trypanosoma brucei rhodesiense sleeping sickness cases. Trop Med Int Health 2005; 10:840-9. [PMID: 16135190 DOI: 10.1111/j.1365-3156.2005.01470.x] [Citation(s) in RCA: 84] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
To formally quantify the level of under-detection of Trypanosoma brucei rhodesiense sleeping sickness (SS) during an epidemic in Uganda, a decision tree (under-detection) model was developed; concurrently, to quantify the subset of undetected cases that sought health care but were not diagnosed, a deterministic (subset) model was developed. The values of the under-detection model parameters were estimated from previously published records of the duration of symptoms prior to presentation and the ratio of early to late stage cases in 760 SS patients presenting at LIRI hospital, Tororo, Uganda during the 1988--1990 epidemic of SS. For the observed early to late stage ratio of 0.47, we estimate that the proportion of under-detection in the catchment area of LIRI hospital was 0.39 (95% CI 0.37--0.41) i.e. 39% of cases are not reported. Based on this value, it is calculated that for every one reported death of SS, 12.0 (95% CI 11.0--13.0) deaths went undetected in the LIRI hospital catchment area - i.e. 92% of deaths are not reported. The deterministic (subset) model structured on the possible routes of a SS infection to either diagnosis or death through the health system or out of it, showed that of a total of 73 undetected deaths, 62 (CI 60-64) (85%) entered the healthcare system but were not diagnosed, and 11 (CI 11--12) died without seeking health care from a recognized health unit. The measure of early to late stage presentation provides a tractable measure to determine the level of rhodesiense SS under-detection and to gauge the effects of interventions aimed at increasing treatment coverage.
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Fèvre EM, Kaboyo RW, Persson V, Edelsten M, Coleman PG, Cleaveland S. The epidemiology of animal bite injuries in Uganda and projections of the burden of rabies. Trop Med Int Health 2005; 10:790-8. [PMID: 16045466 DOI: 10.1111/j.1365-3156.2005.01447.x] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
OBJECTIVES Rabies is a global problem, although it is often under-reported in developing countries. We aimed at describing the profile of patients presenting to health centres with animal bite injuries in Uganda, and use a predictive model to estimate the mortality of rabies at a national level. METHODS We conducted a passive surveillance study in Uganda based in a random sample of health centres supplied with rabies vaccine to determine the characteristics of bite injury patients and establish the age and sex profiles of patients, the site of bites and their severity, wound management techniques and details of the vaccination course given. We also applied a decision tree model to the data to estimate the rabies mortality from the bite injury data using an established protocol. RESULTS We found that most patients are bitten by dogs, and that a considerable proportion of these are young children, who are at greater risk of developing rabies in the absence of treatment due to the location of the bites they receive. From conservative parameter estimates, we estimate that in the absence of post-exposure prophylaxis (PET), 592 (95% CI 345-920) deaths would occur, and that if one dose of PET is sufficient for protection following a rabid animal bite, 20 (95% CI 5-50) deaths would occur annually. If a complete course of PET is required for protection following a rabid animal bite, up to 210 (95% CI 115-359) deaths would occur, as 41% of patients did not complete their course of PET. CONCLUSIONS Active animal bite surveillance studies are required to improve our mortality estimates and determine the true burden of rabies in the Ugandan population. We emphasize the need for small-scale active case detection studies and improved data on the recognition of rabies in dogs as inputs for improving national-level estimates of rabies mortality.
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Affiliation(s)
- E M Fèvre
- Centre for Tropical Veterinary Medicine, Royal (Dick) School of Veterinary Studies, University of Edinburgh, Roslin, UK.
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14
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Abstract
The epidemic of Trypanosoma brucei rhodesiense sleeping sickness in eastern Uganda, which began in 1998 as a result of movements of the livestock reservoir of the parasite, has continued to spread. An additional 133 000 people have been put at risk of infection in Kaberamaido, another newly affected district. The few resources committed to control interventions in Soroti district have failed to contain the epidemic. The high prevalence of the parasite in cattle presents a significant risk for transmission to human beings and further spread of this neglected zoonotic disease. Targeted interventions are urgently needed to control epidemics and reduce the high mortality resulting from sleeping sickness.
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Affiliation(s)
- E M Fèvre
- Centre for Tropical Veterinary Medicine, Royal (Dick) School of Veterinary Studies, University of Edinburgh, Midlothian, UK.
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Odiit M, Shaw A, Welburn SC, Fèvre EM, Coleman PG, McDermott JJ. Assessing the patterns of health-seeking behaviour and awareness among sleeping-sickness patients in eastern Uganda. Ann Trop Med Parasitol 2004; 98:339-48. [PMID: 15228715 DOI: 10.1179/000349804225003389] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
For those with sleeping sickness, the consequences of delayed diagnosis include poor prognosis at treatment and an increased risk of tsetse infection. Data on their socio-demographic and clinical characteristics, health-seeking behaviour and delays in presentation and diagnosis were collected from 119 diagnosed cases of rhodesiense sleeping sickness in eastern Uganda. The median total delay, from onset of the illness to diagnosis, was 60 days. The median service-provider delay (30 days) was markedly longer than the median patient delay (17 days). Each of these delays was, however, considerable and independently associated with patients presenting with late-stage sleepiness, giving odds ratios and (95% confidence intervals) of 7.29 (3.10-17.14) and 2.98 (1.38-6.43), respectively. A blood examination at the first visit was also associated with the service-provider delay (odds ratio = 0.45; 95% confidence interval = 0.22-0.95). Most of the patients (77.4%) had either been referred to the local sleeping-sickness hospital by other members of their community or presented at the hospital on their own initiative; few had been referred by other components of the local health system. The results are disappointing, not only in showing long delays in diagnosis (and therefore in treatment) but also in indicating that much of the delay is attributable to the service provider failing to diagnose sleeping sickness among symptomatic individuals.
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Affiliation(s)
- M Odiit
- Sleeping Sickness Programme, LIRI Hospital, P.O. Box 96, Tororo, Uganda.
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16
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Odiit M, Coleman PG, McDermott JJ, Fèvre EM, Welburn SC, Woolhouse MEJ. Spatial and temporal risk factors for the early detection of Trypanosoma brucei rhodesiense sleeping sickness patients in Tororo and Busia districts, Uganda. Trans R Soc Trop Med Hyg 2004; 98:569-76. [PMID: 15289093 DOI: 10.1016/j.trstmh.2003.12.012] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2003] [Revised: 12/11/2003] [Accepted: 12/16/2003] [Indexed: 11/24/2022] Open
Abstract
We have carried out a study of risk factors for early detection of Trypanosoma brucei rhodesiense sleeping sickness. Records of sleeping sickness patients from 1987 to 2001 from Tororo and Busia districts in Uganda were reviewed for their village of origin and clinical stage (early or late). All villages that reported sleeping sickness and fixed post-diagnostic sleeping sickness health units in Tororo and Busia districts were geo-referenced. The spatial distribution of early and late stage patient detection by health units was analysed using Geographical Information Systems (GIS). Of 1316 sleeping sickness patients admitted at the Livestock Health Research Institute and Busolwe hospitals and Lumino health centre from Tororo and Busia districts, 471 (35.8%) were early stage, 825 (62.7%) were late stage, while 20 (1.5%) were not staged. Five hundred and eighty-five (44.5%) came from within a 10 km radius of the reporting health units. After multivariate analysis, the proportion of early stage patients detected was found to be significantly associated with patients originating from within a 10 km radius of the health unit (P < 0.01), with adults (>19 years) (P < 0.01), and with annual parish incidence (P < 0.01). Application of GIS and the early to late stages ratio are an informative and powerful means of determining efficiency of surveillance of sleeping sickness.
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Affiliation(s)
- M Odiit
- Sleeping Sickness Programme, LIRI Hospital, Tororo, Uganda.
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17
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Abstract
Sleeping sickness has long been a major public health problem in Uganda. From 1900 to 1920, more than 250,000 people died in an epidemic that affected the southern part of the country, particularly the Busoga region. The epidemic has traditionally been ascribed to Trypanosoma brucei gambiense, a parasite now confined to central and western Africa. The Busoga region still reports sleeping sickness, although it is caused by T.b. rhodesiense, commonly believed to have spread to Uganda from Zambia in the 1940s. Our analysis of clinical data recorded in the early 1900s shows that the clinical course of sleeping sickness cases during the 1900-1920 epidemic in Uganda was markedly different from T.b. gambiense cases, but similar to T.b. rhodesiense. These findings suggest that T.b. rhodesiense was present in Uganda and contributed to the epidemic. The historic context is reassessed in the light of these data.
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Affiliation(s)
- E M Fèvre
- University of Edinburgh, Roslin, Midlothian, United Kingdom.
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18
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Abstract
We describe the development of a single-primer amplification system, which uses the trypanosomal mobile genetic element RIME as a molecular marker for the differentiation of Trypanosoma brucei stocks. Using a well-characterised set of T. brucei stocks from southeast Uganda, Kenya and Zambia, we have evaluated the application of this technique, termed MGE-PCR (mobile genetic element PCR) for the typing of trypanosome strains. The technique revealed considerable variation between stocks and was sufficiently specific to amplify trypanosomal DNA in the presence of host DNA. The results showed a clear distinction between human-infective and non-human-infective stocks. Comparative studies on these stocks using markers for the human serum resistance associated (SRA) gene, which identifies human-infective stocks, demonstrated complete agreement between MGE-PCR derived groups and human-infectivity status. Furthermore, MGE-PCR detects high levels of variability within the T. b. brucei and T. b. rhodesiense groups and is therefore a powerful discriminatory tool for tracking individual T. brucei genotypes and strains.
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Affiliation(s)
- A Tilley
- Centre for Tropical Veterinary Medicine, Royal (Dick) School of Veterinary Science, University of Edinburgh, Easter Bush, Roslin, Midlothian, Scotland EH25 9RG, UK.
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Hutchinson OC, Fèvre EM, Carrington M, Welburn SC. Lessons learned from the emergence of a new Trypanosoma brucei rhodesiense sleeping sickness focus in Uganda. Lancet Infect Dis 2003; 3:42-5. [PMID: 12505033 DOI: 10.1016/s1473-3099(03)00488-2] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
During the latter months of 1998, cases of sleeping sickness caused by Trypanosoma brucei rhodesiense presented in Soroti district, eastern Uganda, a region which had not previously experienced cases of the disease. Cattle are the main reservoir for T b rhodesiense, by contrast with sleeping sickness caused by Trypanosoma brucei gambiense in west Africa where there appears to be no epidemiologically significant animal reservoir. Several factors have been identified that interacted to produce ideal conditions for the establishment of a new disease focus. After a period of civil unrest, Soroti, which is within the tsetse belt, was repopulated by people and later, cattle. Both the cattle restocking and the subsequent trade in these cattle at a local cattle market had a role in the appearance of the disease. Recently, molecular biology techniques have become available for the detection and genotype identification of T b rhodesiense and thus it is now possible to distinguish human infective and non-infective trypanosomes in cattle. In light of these advances in identification and in both field and epidemiological techniques, successful disease control management has become an achievable goal and will require the collaboration and expertise of clinicians, veterinarians, epidemiologists and laboratory scientists.
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Affiliation(s)
- O C Hutchinson
- Department of Biochemistry, University of Cambridge, Cambridge, UK
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Welburn SC, Picozzi K, Fèvre EM, Coleman PG, Odiit M, Carrington M, Maudlin I. Identification of human-infective trypanosomes in animal reservoir of sleeping sickness in Uganda by means of serum-resistance-associated (SRA) gene. Lancet 2001; 358:2017-9. [PMID: 11755607 DOI: 10.1016/s0140-6736(01)07096-9] [Citation(s) in RCA: 166] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
BACKGROUND The expansion of sleeping sickness caused by Trypanosoma brucei rhodesiense beyond its traditional focus in southeast Uganda has been linked with large-scale livestock restocking. To assess the risk presented to the human population by domestic livestock, human-infective T b rhodesiense must be distinguished from non-human-infective T brucei brucei, since both parasites can be present in cattle. We investigated the use of a simple genetic marker to characterise parasites collected from cattle in villages within the new sleeping sickness focus in Soroti District, Uganda. METHODS 70 T brucei sl samples of known human infectivity status collected from human beings and cattle in Tororo District, Uganda, from 1989 to 1991 were screened for the presence of the human-serum-resistance-associated (SRA) gene by conventional PCR. In 2000-01, blood samples from 200 randomly selected cattle in six villages and two markets in Soroti District were screened for T brucei sl parasites by PCR; positive samples were screened for the presence of the SRA gene. FINDINGS The SRA gene was present in all 29 samples from patients with sleeping sickness in Tororo District. Of the 41 samples collected from cattle at the same time, the SRA gene was present in the eight samples that tested resistant to human serum in vitro, whereas it was absent from all 33 isolates that were sensitive to human serum in vitro. Of the 200 cattle sampled in Soroti District, we estimated that up to 18% (95% CI 12-23) were infected with T b rhodesiense. INTERPRETATION Detection of the SRA gene could provide the basis for a simple diagnostic test to enable targeted control of T b rhodesiense in the domestic livestock reservoir, thereby reducing the public-health burden of sleeping sickness in east Africa.
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Affiliation(s)
- S C Welburn
- Centre for Tropical Veterinary Medicine, Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Roslin, EH25 9RG, Edinburgh, UK.
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21
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Abstract
BACKGROUND Sleeping sickness, caused by two trypanosome subspecies, Trypanosoma brucei gambiense and Trypanosoma brucei rhodesiense, is a parasitic disease transmitted by the tsetse fly in sub-Saharan Africa. We report on a recent outbreak of T b rhodesiense sleeping sickness outside the established south-east Ugandan focus, in Soroti District where the disease had previously been absent. Soroti District has been the subject of large-scale livestock restocking activities and, because domestic cattle are important reservoirs of T b rhodesiense, we investigated the role of cattle in the origins of the outbreak. METHODS We identified the origins of cattle entering the outbreak area in the 4 years preceding the outbreak. A matched case-control study was conducted to assess whether the distance of villages from the main market involved with restocking was a risk factor for sleeping sickness. We investigated the spatial clustering of sleeping sickness cases at the start of the outbreak. FINDINGS Over 50% (1510 of 2796) of cattle traded at the market were reported to have originated from endemic sleeping sickness areas. The case-control study revealed that distance to the cattle market was a highly significant risk factor for sleeping sickness (p<0.001) and that there was a significant clustering of cases (27 of 28) close to the market at the start of the outbreak (p<0.001). As the outbreak progressed, the average distance of cases moved away from the cattle market (0.014 km per day, 95% CI 0.008-0.020 km per day, p<0.001). INTERPRETATIONS The results are consistent with the disease being introduced by cattle infected with T b rhodesiense imported to the market from the endemic sleeping sickness focus. The subsequent spread of the disease away from the market suggests that sleeping sickness is becoming established in this new focus. Public health measures directed at controlling the infection in the animal reservoir should be considered to prevent the spread of sleeping sickness.
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Affiliation(s)
- E M Fèvre
- Centre for Tropical Veterinary Medicine, University of Edinburgh, Easter Bush, Roslin, Midlothian, EH25 9RG, Scotland, UK.
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22
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Abstract
Sleeping sickness presents clinically as two distinct diseases, reflecting the fact that two very different trypanosomes are responsible. The African Rift separating East and West Africa defines the distribution of the two diseases. In this review, Susan Welburn, Eric Fèvre, Paul Coleman, Martin Odiit and Ian Maudlin discuss the biology and distribution of these two diseases in relation to the evolution of hominids in Africa.
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Affiliation(s)
- S C Welburn
- Sir Alexander Robertson Centre for Tropical Veterinary Medicine, Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Roslin, EH25 9RG., Midlothian, UK.
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Abstract
There appears to be a large a gap in the literature between primary work on malaria control and policy on the one hand and the interpretation of such work in making real policy decisions on the other. The focus of the present review is policy formulation for treatment of uncomplicated falciparum malaria, rather than prophylaxis in travellers or the treatment of severe disease. The World Health Organization has formulated guidelines addressing the issue of changing from one recommended drug for treating malaria to another, but there does not appear to have been a comprehensive attempt to describe how and when such a decision on drug policy should be made. Issues of drug availability, both to countries and to communities within them, are discussed, as well as the acceptability of drug regimens and compliance with them. It emerges that the cost of treatment has a disproportionate influence on the decision-making process, and that the indirect costs of drug failure are often not considered properly. Brief mention is made of the indicators of overall disease burden. There is some discussion about the usefulness of one recently introduced economic indicator: the disability-adjusted life-year (DALY). Also examined are the difficulties that arise within the context of drug-policy changes, such as a regimen's appropriateness to all target groups, and the strong influence of the private sector on decision-making that affects its own financing. The consensus seems to be that a policy change is urgent when high-level resistance occurs in 40% or more of treated cases, when parasitological response is poor, and when the costs of treatment failures are higher than those of treatments with a newer drug. It also emerges that much remains to be done regarding co-operation between public and private sectors; considering the importance of private-sector provision of health care, this needs to be addressed.
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Affiliation(s)
- E M Fèvre
- Liverpool School of Tropical Medicine, U.K.
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24
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Abstract
Drug resistance is a major problem affecting progress on malaria control, while many current programmes are seeking to introduce impregnated bednets to reduce transmission and hence child mortality and morbidity. David Molyneux, Katherine Floyd, Guy Barnish and Eric Fèvre propose that more consideration should be given to the interaction between transmission control and the development of drug resistance, and that vector control as a means of reducing disease transmission is involved in reducing the rate of development, and the level, of resistance. Therefore, investment in vector control can have important benefits in reducing the future expenditure on drugs (as well as other costs, such as hospitalization, management of resistant cases and severe disease, drug development and household expenditure on malaria chemotherapy). Modelling the many parameters that impact on this complex relationship will better inform policy makers.
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Affiliation(s)
- D H Molyneux
- Liverpool School of Tropical Medicine, Pembroke Place, Liverpool, UK.
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Fèvre EM, Barnish G, Yamokgul P, Rooney W. Sensitivity in vitro of Plasmodium falciparum to three currently used antimalarial drugs on the western border of Thailand. Trans R Soc Trop Med Hyg 1999; 93:180-4. [PMID: 10450446 DOI: 10.1016/s0035-9203(99)90302-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
The sensitivity in vitro of Plasmodium falciparum to mefloquine, quinine and artemisinin was assessed in an area of multi-drug resistance on the Thai-Myanmar border, using the World Health Organization's microtest, based on schizont maturation inhibition. Participating individuals were exclusively those who had contracted their infections within Myanmar. A total of 34 successful tests were carried out for mefloquine and quinine, showing a marked decrease in sensitivity compared to previously published results. Ten artemisinin tests were successful, with many failures due to the poor storage stability of the test plates. The implications of the shelf-life of the artemisinin plates is discussed. These results contribute to setting a base line of sensitivity to artemisinin in vitro.
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Affiliation(s)
- E M Fèvre
- Liverpool School of Tropical Medicine, UK
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