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Fung C, Fraser L, Barrón G, Gologorsky M, Atkinson S, Gerrick E, Hayward M, Ziegelbauer J, Li J, Nico K, Tyner M, DeSchepper L, Pan A, Salzman N, Howitt M. Tuft cells mediate commensal remodeling of the small intestinal antimicrobial landscape. Proc Natl Acad Sci U S A 2023; 120:e2216908120. [PMID: 37253002 PMCID: PMC10266004 DOI: 10.1073/pnas.2216908120] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 04/19/2023] [Indexed: 06/01/2023] Open
Abstract
Succinate produced by the commensal protist Tritrichomonas musculis (T. mu) stimulates chemosensory tuft cells, resulting in intestinal type 2 immunity. Tuft cells express the succinate receptor SUCNR1, yet this receptor does not mediate antihelminth immunity nor alter protist colonization. Here, we report that microbial-derived succinate increases Paneth cell numbers and profoundly alters the antimicrobial peptide (AMP) landscape in the small intestine. Succinate was sufficient to drive this epithelial remodeling, but not in mice lacking tuft cell chemosensory components required to detect this metabolite. Tuft cells respond to succinate by stimulating type 2 immunity, leading to interleukin-13-mediated epithelial and AMP expression changes. Moreover, type 2 immunity decreases the total number of mucosa-associated bacteria and alters the small intestinal microbiota composition. Finally, tuft cells can detect short-term bacterial dysbiosis that leads to a spike in luminal succinate levels and modulate AMP production in response. These findings demonstrate that a single metabolite produced by commensals can markedly shift the intestinal AMP profile and suggest that tuft cells utilize SUCNR1 and succinate sensing to modulate bacterial homeostasis.
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Affiliation(s)
- Connie Fung
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
| | - Lisa M. Fraser
- Division of Gastroenterology, Department of Pediatrics, Medical College of Wisconsin, Milwaukee, WI53226
| | - Gabriel M. Barrón
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
- Program in Immunology, Stanford University School of Medicine, Stanford, CA94305
| | | | - Samantha N. Atkinson
- Department of Microbiology and Immunology, Center for Microbiome Research, Medical College of Wisconsin, Milwaukee, WI53226
| | - Elias R. Gerrick
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
| | - Michael Hayward
- Division of Gastroenterology, Department of Pediatrics, Medical College of Wisconsin, Milwaukee, WI53226
- Department of Microbiology and Immunology, Center for Microbiome Research, Medical College of Wisconsin, Milwaukee, WI53226
| | - Jennifer Ziegelbauer
- Department of Microbiology and Immunology, Center for Microbiome Research, Medical College of Wisconsin, Milwaukee, WI53226
| | - Jessica A. Li
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
| | - Katherine F. Nico
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
- Program in Immunology, Stanford University School of Medicine, Stanford, CA94305
| | - Miles D. W. Tyner
- Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA94305
| | - Leila B. DeSchepper
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
| | - Amy Pan
- Department of Microbiology and Immunology, Center for Microbiome Research, Medical College of Wisconsin, Milwaukee, WI53226
- Division of Quantitative Health Services, Department of Pediatrics, Medical College of Wisconsin, Milwaukee, WI53226
| | - Nita H. Salzman
- Division of Gastroenterology, Department of Pediatrics, Medical College of Wisconsin, Milwaukee, WI53226
- Department of Microbiology and Immunology, Center for Microbiome Research, Medical College of Wisconsin, Milwaukee, WI53226
| | - Michael R. Howitt
- Department of Pathology, Stanford University School of Medicine, Stanford, CA94305
- Program in Immunology, Stanford University School of Medicine, Stanford, CA94305
- Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA94305
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