AusTraits, a curated plant trait database for the Australian flora

We introduce the AusTraits database - a compilation of values of plant traits for taxa in the Australian flora (hereafter AusTraits). AusTraits synthesises data on 448 traits across 28,640 taxa from field campaigns, published literature, taxonomic monographs, and individual taxon descriptions. Traits vary in scope from physiological measures of performance (e.g. photosynthetic gas exchange, water-use efficiency) to morphological attributes (e.g. leaf area, seed mass, plant height) which link to aspects of ecological variation. AusTraits contains curated and harmonised individual- and species-level measurements coupled to, where available, contextual information on site properties and experimental conditions. This article provides information on version 3.0.2 of AusTraits which contains data for 997,808 trait-by-taxon combinations. We envision AusTraits as an ongoing collaborative initiative for easily archiving and sharing trait data, which also provides a template for other national or regional initiatives globally to fill persistent gaps in trait knowledge.

Cutting food in terrestrial carnivores and herbivores

Insects and mammals cut their food up into small pieces to facilitate ingestion and chemical digestion. Teeth and jaws act as cutting tools, but, unlike engineering tools designed for a specific purpose, must generally cope with substantial variation in food properties and work at many scales. Knowing how teeth and jaws work effectively requires an understanding of the cutting on the edges and the mechanisms that remove cut material. Variability and heterogeneity of diet properties are not well known, and, for example, may be higher and overlap more in the browsing and grazing categories of plant diets. A reinterpretation of tooth function in large mammal browsers and grazers is proposed.

Leaf traits in Chilean matorral: sclerophylly within, among, and beyond matorral, and its environmental determinants

Studies of leaf traits often focus on tradeoffs between growth and resource conservation, but little is known about variation in the mechanical traits that influence resource conservation. This study investigates how leaf mechanical traits vary across matorral vegetation in central Chile, how they correlate with environmental factors, and how these trends compare at a broader geographic scale. Leaf toughness, strength, stiffness, and associated traits were measured in five matorral types in central Chile, and relationships with soil N and P and climate variables were assessed. Trends with soil and climate were then analyzed across shrubland and woodland in Chile, Western Australia, and New Caledonia. Chilean species varied in leaf mechanics and associated traits, both within and among matorral types, with more species in sclerophyll matorral having strong, tough, and stiff leaves than in arid and littoral matorral. Overall, leaves with high leaf dry mass per area were stiffer, tougher, stronger, thicker, denser, with more fiber, lignin, phenolics and fiber per unit protein and less protein: tannin activity and N and P per mass, forming a broad sclerophylly syndrome. Mechanical traits of matorral species were not correlated with soil N or P, or predictably with climate variables, except flexural stiffness (EI W) which correlated positively with annual reference evapotranspiration (ET 0). However, soil P made strong independent contributions to variation in leaf mechanics across shrublands and woodlands of Chile, Western Australia, and New Caledonia, either separately (strength) or together with ET 0 (toughness) explaining 46-90% of variation. Hence ET 0 was predictive of EI W in Chilean matorral, whereas soil P was highly predictive of variation in leaf strength, and combined with ET 0 was highly predictive of toughness, at a broader geographic scale. The biological basis of these relationships, however, may be complex.

The release and induced immune responses of a plant-made and delivered antigen in the mouse gut

This study investigated the site of release of a model vaccine antigen from plant cells and the corresponding induced immune response. Three plant tissues (leaf, fruit and hairy root) and two formulations (aqueous and lipid) were compared in two mouse trials. A developed technique that enabled detection of antigen release by plant cells determined that antigen release occurred at early sites of the gastrointestinal tract when delivered in leaf material and at later sites when delivered in hairy roots. Lipid formulations delayed antigen release from all plant materials tested. While encapsulation in the plant cell provided some protection of the antigen in the gastrointestinal tract and influenced antigen release, formulation medium was also an important consideration with regard to vaccine delivery and immunogenicity. Systemic immune responses induced from the orally delivered vaccine benefited from late release of antigen in the mouse gastrointestinal tract. The influences to the mucosal immune response induced by these vaccines were too complex to be determined by studies performed here with no clear trend regarding plant tissue site of release or formulation medium. Expression and delivery of the model antigen in plant material prepared in an aqueous formulation provided the optimal systemic and mucosal, antigen-specific immune responses.

Focal plane array infrared imaging: a new way to analyse leaf tissue

* Here, a new approach to macromolecular imaging of leaf tissue using a multichannel focal plane array (FPA) infrared detector was compared with the proven method of infrared mapping with a synchrotron source, using transverse sections of leaves from a species of Eucalyptus. * A new histological method was developed, ideally suited to infrared spectroscopic analysis of leaf tissue. Spatial resolution and the signal-to-noise ratio of the FPA imaging and synchrotron mapping methods were compared. * An area of tissue 350 microm(2) required approx. 8 h to map using the synchrotron technique and approx. 2 min to image using the FPA. The two methods produced similar infrared images, which differentiated all tissue types in the leaves according to their macromolecular chemistry. * The synchrotron and FPA methods produced similar results, with the synchrotron method having superior signal-to-noise ratio and potentially better spatial resolution, whereas the FPA method had the advantage in terms of data acquisition time, expense and ease of use. FPA imaging offers a convenient, laboratory-based approach to microscopic chemical imaging of leaves.

Artificial insemination with frozen semen in dogs: A retrospective study of 10 years using a non-surgical approach

From 1994 to 2003, a total of 526 bitches of 99 different breeds were artificially inseminated in 685 estrus cycles with domestic (n = 353) or imported (n = 332) frozen-thawed semen from 368 males. The overall whelping rate was 73.1% and mean (+/- S.E.M.) litter size 5.7 +/- 0.1 pups. The whelping rate was higher after intrauterine insemination (75.0%; n = 665) than after intravaginal insemination (10.0%, n = 20; P < 0.05). Insemination at the optimal time resulted in a higher whelping rate (78%, n = 559; P < 0.01) and larger litter size (5.8 +/- 0.2; P < 0.05) than inseminations performed late or too late (55.7% and 4.5 +/- 0.5, n = 61). Two inseminations (n = 384) yielded a higher whelping rate (P < 0.05) and mean litter size (P < 0.01) than one insemination (n = 241), 78.1% and 6.0 +/- 0.2 and 70.5% and 5.1 +/- 0.2, respectively. For inseminations performed at the optimal time, however, the whelping rate was not significantly different for bitches inseminated twice (79.3%, n = 358) versus once (76.8%, n = 168), but the litter size was larger (6.0 +/- 0.2 and 5.3 +/- 0.3). Semen classified as of poor quality (progressive motility < 50% or percentage abnormal sperm > 20%) resulted in a lower whelping rate (P < 0.01) than semen classified as of good quality (progressive motility > or = 50% and percentage abnormal sperm < or = 20%), 61 and 77%, respectively. Small breeds (n = 50) had a smaller litter size (3.9 +/- 0.3; P < 0.01) than larger breeds (medium [5.7 +/- 0.3, n = 94], large [5.9 +/- 0.2, n = 295] or giant breeds [6.1 +/- 0.5, n = 62] [P < 0.01]). Bitches older than 6 years had a lower whelping rate (68.2%) than younger ones (77.0%; P < 0.05). The duration of pregnancy was longer (P < 0.01) for bitches with a litter size of < 3 pups (61.7 +/- 0. 4 days, n = 30) than for bitches with larger litters (60.5 +/- 0.1 days, n = 177). These results show the potential of transcervical intrauterine insemination for routine artificial insemination in dogs. The results with frozen semen inseminations were optimised by inseminating bitches < or = 6 years old 2 and 3 days after ovulation with semen of good quality from males < or = 8 years old.

The biomechanics of browsing and grazing

Terrestrial plant leaves are complex structures of composite materials. Resistance to fracture is achieved by a number of mechanisms, which operate at the molecular, cell, tissue, and structural levels. Leaves of dicots have different venation patterns and cell wall volume fractions from those of grasses, and consequently, they potentially resist fracture in different ways. Animals mechanically process plants in order to rupture the cell wall in preparation for enzymic hydrolysis, for which the imperative is to maximize new surface area and/or to expedite access to cell contents, ideally by promoting elastic fracture. The two different plant types are fed on by two different groups of organisms of very different sizes, digestive physiologies, mechanical processing abilities and properties, and nutritional requirements. Small insects can feed in or on parts of leaves, while larger mammals generally have to feed on the whole leaf. The scale of feeding also differs for the two groups of herbivores, but how this interacts with the scale of the mechanical properties of the leaf is not well understood. Plant leaves are attacked at all scales and probably can only produce generalized responses to specialized herbivores. In addition, the opportunities that these different scales of interactions open for the different herbivores remain unexplored.

Effects of 2 patterns of prehospital care on the outcome of patients with severe head injury

HYPOTHESIS

A pattern of prehospital care combining advanced life support, physician staffing, and helicopter transport improves the outcome of patients with severe brain injuries, compared with combined expanded basic life support, nurse staffing, and ground transport.

DESIGN

Inception cohort from the data set of a population-based, prospective study on major trauma.

SETTING

Prehospital and hospital trauma systems of an Italian region.

PATIENTS

All patients with major trauma (Injury Severity Score, >or=16) and severe head injury (Abbreviated Injury Scale score for the head, >or=4) rescued alive from March 1, 1998, to February 28, 1999, who received either form of care. Patients with self-inflicted injuries were excluded. The 184 patients who met the entry criteria were divided equally between care groups.

INTERVENTIONS

None.

MAIN OUTCOME MEASURES

Mortality at 30 days and Glasgow Outcome Scale score of survivors.

RESULTS

After verifying the comparability of the cohorts, no survival or disability benefit could be demonstrated (95% confidence interval [CI] of the odds ratio for mortality [helicopter/ambulance] [95% CI 1], 0.72 to 2.67; 95% CI of the difference in Glasgow Outcome Scale score medians between helicopter and ambulance groups [95% CI 2], 0.0 to 0.0). Similar results were derived from analyses restricted to the subgroups identified by low (<or=90 mm Hg) roadside systolic blood pressure (95% CI 1, 0.58 to 7.17; 95% CI 2, -1 to 2) and by need for urgent neurosurgical intervention (95% CI 1, 0.16 to 2.60; 95% CI 2, 0 to 2). Exclusion from the ambulance group of victims rescued in urban areas did not change the results (95% CI 1, 0.80 to 3.24; 95% CI 2, 0.0 to 0.0). Stratification by age, Injury Severity Score, and Glasgow Coma Scale score demonstrated a small survival benefit (95% CI 1, 1.12 to 2.12) in the ambulance subgroup with Glasgow Coma Scale score from 10 to 12. Multiple logistic regression analysis confirmed that the group did not affect mortality.

CONCLUSION

This study was conceived to emphasize the supposed advantages of the combined helicopter, physician, and advanced life-support rescue. No increased benefit compared with the simpler rescue group could be demonstrated.

A population-based study on pneumothorax in severely traumatized patients

BACKGROUND

Pneumothorax (PNX) is a recognized cause of preventable deaths in trauma patients. Our objective was to determine the incidence of traumatic PNX, the characteristics of its victims, and the treatment they receive.

METHODS

The study consisted of data set of a population-based study on major trauma.

RESULTS

The incidence of PNX was 81 per 1 million population per year, mostly caused by transport accidents. PNX victims generally had multiple injuries, and they showed on-scene clinical parameters worse than victims of other chest injuries of comparable severity. Fifty-three percent of PNXs were drained during the prehospital and early (< 2 hours) hospital course. There was no uniformity of treatment among different types of rescue facilities, some of them never performing decompression despite clinical need. The z statistic for mortality was -0.63.

CONCLUSION

PNX can be expected in one in five major trauma victims found alive. PNX is associated with a peculiar on-scene instability. Early decompression is often required. The effects of wider access to prehospital decompression and the reasons for its uneven availability in our setting need elucidation. Nevertheless, the present mortality follows the international standards.

Protective effect of n-acetylcysteine in a model of influenza infection in mice

Reactive oxygen intermediates (ROI) and cytokines, particularly tumor necrosis factor (TNF) have been implicated in the pathogenesis of influenza. Using a murine model of influenza, we have studied the levels of TNF, interleukin 6 (IL-6) and of superoxide-generating xanthine oxidase (XO). Mice infected intranasally with influenza virus APR/8 had high levels of XO, TNF and IL-6 in the broncoalveolar lavage, as early as 3 d after infection. XO was elevated also in serum and lung tissue. Administration of the antioxidant N-acetylcysteine (NAC,1 g/kg per day, orally) significantly decreased the mortality in infected mice, indicating a role for RO1 in the lethality associated with influenza infection.

Characterising sclerophylly: some mechanical properties of leaves from heath and forest

Although sclerophylly is widespread through the world and is often the dominant leaf-form in mediterranean climates, the mechanical properties of sclerophyllous leaves are poorly understood. The term "sclerophyllous" means hard-leaved, but biologists also use terms such as tough, stiff and leathery to describe sclerophyllous leaves. The latter term has no precise definition that allows quantification. However, each of the former terms is well-defined in materials engineering, although they may be difficult or sometimes inappropriate to measure in leaves because of their size, shape or composite and anisotropic nature. Two of the most appropriate and practically applicable mechanical properties of sclerophyllous leaves are "strength" and "toughness", which in this study were applied using punching, tearing and shearing tests to 19 species of tree and shrub at Wilson's Promontory, Australia. The results of these tests were compared with leaf specific mass (LSM) and a sclerophylly index derived from botanists' ranks. Principal components analysis was used to reduce the set of mechanical properties to major axes of variation. Component 1 correlated strongly with the botanists' ranks. Overall, leaves ranked as sclerophyllous by botanists were both tough and strong in terms of punching and tearing tests. In addition, tough and strong leaves typically had high toughness and strength per unit leaf thickness. There was also a significant correlation between component 1 and LSM. Although more detailed surveys are required, we argue that sclerophylly should be defined in terms of properties that have precise meanings and are measurable, such as toughness and strength, and that relate directly to mechanical properties as implicit in the term.

Road traffic accidents with vehicular entrapment: incidence of major injuries and need for advanced life support

Road traffic accidents (RTAs) with entrapment are perceived as a challenge to emergency systems because of the severity of the ensuing traumas and the inherent complexity of the rescue procedures. To clarify these two aspects this prospective cohort study enrolling 244 entrapped trauma patients was conducted by a Regional Medical Helicopter Service. Forty-six victims (18.9%) were found dead, 101 (51%) of the 198 patients who reached the hospital alive had an injury severity score (ISS) > or = 16. The use of seat belts was associated with lower trauma severity. Out of the 101 severely traumatized patients (ISS > or = 16), 46 (42.6%) were intubated at road side, 12 required decompression of a tension pneumothorax on the scene and in 15 cases a pneumothorax was drained during the early intrahospital phase. Thirty-six (34.7%) patients had the first systolic blood pressure (SBP) < or = 90 mmHg and were then aggressively infused: in 75% of these cases, the SBP on arrival at the emergency department increased. The first SBP was significantly correlated with mortality. There was no correlation of extrication time, total rescue time and mortality. Fourteen patients (13.9%) died during hospitalization. These data demonstrate that a high percentage of entrapped patients require advanced life support (ALS), including on scene intubation and chest decompression. Aggressive field resuscitation and immediate transport to a level 1 trauma centre is associated with a mortality lower than that predicted by TRISS in spite of the prolonged prehospital time.

The oxidation of dopamine and epinine by the two forms of monoamine oxidase from rat liver

Information on the "in vitro" oxidation of epinine by monoamine oxidase (MAO) compared to dopamine is very poor. The aim of this work was to study the oxidative deamination of epinine and dopamine by rat liver MAO-A and MAO-B. The contributions of MAO-A and B to the metabolism of dopamine (55% and 45%, respectively) and epinine (70% and 30%, respectively) were similar. The results of this study show that epinine is a substrate for both forms of MAO in rat liver, although the contribution of MAO A to the deamination of this secondary amine appears to be slightly more important than that of MAO B.

The effects of plant and tooth structure on intake and digestibility in two small mammalian herbivores

We investigated the interaction between plant structure and animal tooth structure and how it can affect digestive performance in two small mammalian herbivores. Mastacomys fuscus, an exclusively herbivorous rodent, and Rattus lutreolus, a less herbivorous rodent, were fed diets varying in fibre structure and level (18%-45% neutral detergent fibre). On high-fibre whole wheat diets, R. lutreolus was not able to maintain body mass. M. fuscus was able to maintain body mass, and this was related to a much greater intake by M. fuscus on this diet. We attribute this result to more effective physical processing by M. fuscus as a consequence of a highly developed dentition. On a milled-wheat diet, intake by R. lutreolus increased significantly compared with the whole wheat diet, although intake was still not great enough to maintain body mass. On diets that were lower in fibre than the wheat diet, and with different fibre arrangements, R. lutreolus was able to achieve intakes great enough to maintain body mass. This suggests that, in addition to gut constraints, the physical form of the plant diet and dental structure can have a significant effect on digestive performance by animals in feeding trials.

Use of the Metabolisable Energy Coefficient in Bird Studies: Statistical Power in Taxa and Food Comparisons

A widely cited review of the digestive efficiency of birds concluded that the apparent Metabolisable Energy Coefficient (*MEC), a measure of the efficiency of energy assimilation, did not vary between bird orders. To test whether this result was due to the variation between the experimental methods of the studies chosen for the review, the *MEC was measured for four species (two galliforms and two columbiforms) fed a variety of seeds. The *MEC of the birds did not vary in any consistent manner when fed identical diets, thus supporting the review's result. However, the *MEC of each species varied consistently with change in diet. These findings can be explained by the statistical power of the *MEC comparisons. Comparisons of *MEC between bird species are less powerful than comparisons between diets.

Preliminary Microscopic Investigations of the Digesta Derived From Foliage of Eucalyptus-Ovata (Labill) in the Digestive-Tract of the Common Ringtail Possum, Pseudocheirus-Peregrinus (Marsupialia)

A method is described that stabilizes vacuolar tannins in unchewed leaves of Eucalyptus ovata. This method, with light microscopy and electron microscopy, was used to study the fate of digesta in the gut of the common ringtail possum Pseudocheirus peregrinus. Normal animals (fed fresh foliage and practising coprophagy) were compared with animals denied access either to fresh foliage or to soft faecal pellets in the week before they were killed. Both manipulations appear to disturb gut function and create a need for caution in interpreting the observations. Nonetheless the results demonstrate some tanning of leaf cytoplasts in the ringtail possum, but the quantitative significance of the dietary losses so incurred is difficult to estimate. Partial digestion of cell walls and tanned cytoplasts occurs in the caecum, where massive populations of micro-organisms become attached to digestion-resistant tissue components. These 'microbial rafts' are reingested as soft pellets by coprophagy and the bacteria largely digested.

The Morphology and Occlusion of the Molariform Cheek Teeth in Some Macropodinae (Marsupialia: Macropodidae)

The morphology and functional occlusion of the cheek teeth of Wallabia bicolor and Macropus giganteus are compared. W. bicolor seems to be essentially a browser and M. giganteus is predominantly a grazer. W. bicolor has a large sectorial premolar, weakly developed links, a plane tooth row with all the teeth in occlusion simultaneously in the adult, and no molar progression. M. giganteus has a reduced premolar, strongly developed links, a curved lower tooth row which meets the upper tooth row at a tangent allowing only a few teeth to be in occlusion at one time, and molar progression. The reconstruction of the occlusal cycles is interpreted mainly by examination of wear facet development and striae patterns. Occlusion in W. bicolor involves a strong anteroposterior action bringing the opposing surfaces together across a broad area. M. giganteus teeth occlude with an initial forward motion, followed by a lateral movement which avoids large surface-area contact. M. giganteus teeth seem to be more adapted to cutting fibrous, abrasive material. Species of Dorcopsis, Dorcopsulus, Dendrolagus, Thylogale and Setonix show the same general masticatory features as W. bicolor, but species of Macropus and Megaleia more approximate the M. giganteus condition.