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Ndiaye C, Lo CI, Bassene H, Raoult D, Lagier JC, Sokhna C. Lysinibacillus timonensis sp. nov., Microbacterium timonense sp. nov., and Erwinia mediterraneensis sp. nov., three new species isolated from the human skin. New Microbes New Infect 2019; 31:100579. [PMID: 31338200 PMCID: PMC6626113 DOI: 10.1016/j.nmni.2019.100579] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Accepted: 06/12/2019] [Indexed: 11/05/2022] Open
Abstract
Lysinibacillus timonensis strain Marseille-P5727T (=CSURP5727), Microbacterium timonense strain Marseille-P5731T (=CSURP5731) and Erwinia mediterraneensis strain Marseille-P5165T (=CSURP5165) are three new species isolated from the human skin.
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Affiliation(s)
- C Ndiaye
- Aix Marseille Univ, IRD, AP-HM, MEPHI, Marseille, France.,IHU-Méditerranée Infection, Marseille, France.,Campus Commun UCAD-IRD of Hann, Dakar, Senegal
| | - C I Lo
- Aix Marseille Univ, IRD, AP-HM, MEPHI, Marseille, France.,IHU-Méditerranée Infection, Marseille, France
| | - H Bassene
- Campus Commun UCAD-IRD of Hann, Dakar, Senegal.,Aix Marseille Univ, IRD, AP-HM, SSA, VITROME, Marseille, France
| | - D Raoult
- Aix Marseille Univ, IRD, AP-HM, MEPHI, Marseille, France.,IHU-Méditerranée Infection, Marseille, France
| | - J-C Lagier
- Aix Marseille Univ, IRD, AP-HM, MEPHI, Marseille, France.,IHU-Méditerranée Infection, Marseille, France
| | - C Sokhna
- Campus Commun UCAD-IRD of Hann, Dakar, Senegal.,Aix Marseille Univ, IRD, AP-HM, SSA, VITROME, Marseille, France
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Dahmani M, Diatta G, Labas N, Diop A, Bassene H, Raoult D, Granjon L, Fenollar F, Mediannikov O. Corrigendum to 'Noncontiguous finished genome sequence and description of Bartonella mastomydis sp. nov.' [New Microbes New Infect 25 (2018) 60-70]. New Microbes New Infect 2018; 27:3. [PMID: 30505451 PMCID: PMC6249391 DOI: 10.1016/j.nmni.2018.10.005] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2018] [Accepted: 10/15/2018] [Indexed: 11/21/2022] Open
Affiliation(s)
- M Dahmani
- Aix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France
| | - G Diatta
- IRD VITROME, Campus Commun UCAD-IRD of Hann, Dakar, Senegal
| | - N Labas
- Aix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France
| | - A Diop
- Aix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France
| | - H Bassene
- IRD VITROME, Campus Commun UCAD-IRD of Hann, Dakar, Senegal
| | - D Raoult
- Aix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France
| | - L Granjon
- CBGP, IRD, INRA, CIRAD, Montpellier SupAgro, Université de Montpellier, Montpellier, France
| | - F Fenollar
- Aix-Marseille Université, IRD, AP-HM, SSA, VITROME, Marseille, France
| | - O Mediannikov
- Aix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France
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Mediannikov O, Socolovschi C, Bassene H, Diatta G, Ratmanov P, Fenollar F, Sokhna C, Raoult D. High incidence of Borrelia crocidurae in acute febrile patients in Senegal. Int J Infect Dis 2014. [DOI: 10.1016/j.ijid.2014.03.876] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
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Fenollar F, Mediannikov O, Sokhna C, Bassene H, Diatta G, Tall A, Raoult D. Staphylococcus aureus, Streptococcus pneumoniae, and Streptocccus pyogenes DNA are common in febrile patients in Senegal. Int J Infect Dis 2014. [DOI: 10.1016/j.ijid.2014.03.1115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
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Mediannikov O, Socolovschi C, Million M, Fenollar F, Bassene H, Diatta G, Sokhna C, Raoult D. Molecular identification of pathogenic bacteria in eschars from acute febrile patients, Senegal. Int J Infect Dis 2014. [DOI: 10.1016/j.ijid.2014.03.1111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
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Bassene H, Kengne P, Ndiath MO, Sokhna C, Dupressoir T, Fontenille D, Trape JF. [Comparison of PCR, ELISA-CSP and direct microscopic observation methods for the detection of Plasmodium falciparum sporozoites in Anopheles gambiae M in Senegal]. Bull Soc Pathol Exot 2009; 102:233-237. [PMID: 19950541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
A comparative study between the Enzyme-Linked Immuno Sorbent Assay (ELISA-CSP) for circumsporozoitic antigen detection method, the direct observation after dissection and the polymerase chain reaction (PCR) technique used to identify Plasmodium falciparum genomic DNA markers was carried out. This to evaluate the sensibility and the specificity of the PCR, for the determination of both sporozoitic index (ICSP) and the entomological inoculation rate (EIR). The study is conducted in laboratory on eighty six specimens of Anopheles gambiae M infected after being fed with the blood of a gametocytes carrier from Dielmo (Senegal). Salivary glands of forty-eight specimens randomly selected (test A) among the infected eighty six are microscopically observed after manual dissection for the sporozoites detection. The content of these salivary glands and the crushed head/thorax of the remaining 38 specimens (test B) are tested in ELISA-CSP and PCR. The positive and negative results obtained were recorded and summarized for each method. A pair-comparison of the results obtained with each method generally revealed a good sensibility and an excellent specificity The kappa coefficient (K) of test A indicated a "moderate" to "excellent" concordance between the three different methods performed. By using the crushed head/thorax sample, generally used to determine the transmission parameters (ICSP and EIR), the PCR/ELISA-CSP concordance was excellent. In the light of the values of sensibility and specificity obtained, this PCR is comparable to the other methods for the assessment of sporozoitic index and entomological inoculation rate.
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Affiliation(s)
- H Bassene
- Laboratoire de paludologie et zoologie médicale, Institut de recherche pour le développement (IRD), BP 1386, Dakar Sénégal.
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