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Saini K, Cho S, Tewari M, Jalil AR, Wang M, Kasznel AJ, Yamamoto K, Chenoweth DM, Discher DE. Pan-tissue scaling of stiffness versus fibrillar collagen reflects contractility-driven strain that inhibits fibril degradation. bioRxiv 2023:2023.09.27.559759. [PMID: 37808742 PMCID: PMC10557712 DOI: 10.1101/2023.09.27.559759] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/10/2023]
Abstract
Polymer network properties such as stiffness often exhibit characteristic power laws in polymer density and other parameters. However, it remains unclear whether diverse animal tissues, composed of many distinct polymers, exhibit such scaling. Here, we examined many diverse tissues from adult mouse and embryonic chick to determine if stiffness ( E tissue ) follows a power law in relation to the most abundant animal protein, Collagen-I, even with molecular perturbations. We quantified fibrillar collagen in intact tissue by second harmonic generation (SHG) imaging and from tissue extracts by mass spectrometry (MS), and collagenase-mediated decreases were also tracked. Pan-tissue power laws for tissue stiffness versus Collagen-I levels measured by SHG or MS exhibit sub-linear scaling that aligns with results from cellularized gels of Collagen-I but not acellular gels. Inhibition of cellular myosin-II based contraction fits the scaling, and combination with inhibitors of matrix metalloproteinases (MMPs) show collagenase activity is strain - not stress- suppressed in tissues, consistent with past studies of gels and fibrils. Beating embryonic hearts and tendons, which differ in both collagen levels and stiffness by >1000-fold, similarly suppressed collagenases at physiological strains of ∼5%, with fiber-orientation regulating degradation. Scaling of E tissue based on 'use-it-or-lose-it' kinetics provides insight into scaling of organ size, microgravity effects, and regeneration processes while suggesting contractility-driven therapeutics.
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Yadav S, Rani N, Saini K. Coupling ZnO with CuO for efficient organic pollutant removal. Environ Sci Pollut Res Int 2023; 30:71984-72008. [PMID: 36414902 DOI: 10.1007/s11356-022-24139-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Accepted: 11/06/2022] [Indexed: 06/14/2023]
Abstract
Fabrication of heterojunction semiconductors for the photodegradation of toxic organic dyes under sunlight exposure has earned significant recognition from researchers nowadays. On that account, we have synthesized and explored a comparative photodegradation study of ZnO/CuO nanocomposite with ZnO and CuO nanoparticles. ZnO and CuO nanoparticles have been synthesized by biosynthesis methods using Ficus benghalensis leaf extract. As-synthesized ZnO and CuO nanoparticles have been further utilized for the synthesis of ZnO/CuO nanocomposite by the mortar pestle crushing/milling method. Both biosynthesis methods and mortar pestle crushing/milling methods are simple, low-cost, and environmentally friendly. Structural, optical, and morphological analysis of all the synthesized nanomaterials have been done by powder X-ray diffraction (PXRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), Brunauer-Emmett-Teller (BET), field emission scanning electron microscopy (FESEM), energy-dispersive spectroscopy (EDS), fourier transform infrared spectroscopy (FTIR), and UV-visible spectroscopy. PXRD data reveal that synthesized ZnO nanoparticles are in the hexagonal wurtzite phase, CuO nanoparticles in the monoclinic phase, and ZnO/CuO nanocomposite in the hexagonal wurtzite as well as in monoclinic phase. FE-SEM and TEM images of ZnO/CuO nanocomposite reveal the nanorod-shaped morphology along with micro-sized and nano-sized flakes. The BET analysis shows the surface areas 18.128 m2/g for ZnO nanoparticles, 16.653 m2/g for CuO nanoparticles, and 19.580 m2/g for ZnO/CuO nanocomposite, respectively. The energy band gap values of ZnO/CuO nanocomposite are obtained 3.13 eV for ZnO and 2.76 eV for CuO, respectively. The photocatalytic behaviors of all the synthesized nanomaterials are examined against aqueous dye solutions of methylene blue (MB), rhodamine B (RhB), and methyl orange (MO) under sunlight irradiation. The results reveal that the photocatalytic degradation efficiency of ZnO/CuO nanocomposite has been found higher than with ZnO and CuO nanoparticles for all the dyes. Also, all the synthesized nanomaterials indicate higher photocatalytic degradation efficiency for methylene blue dye among all three dyes. The kinetics of photodegradation of all the dye solutions has also been investigated in the presence of ZnO, CuO, and ZnO/CuO photocatalysts separately. The results exhibit that rate constant values for all the dyes are higher with ZnO/CuO nanocomposite than with ZnO and CuO nanoparticles. ZnO/CuO nanocomposite demonstrates degradation efficiency for MB dye 99.13%, for RhB 80.21%, and for MO 67.22% after 180 min of sunlight exposure. ZnO/CuO nanocomposite and ZnO and CuO nanoparticles also show the best reusability and stability up to three cycles for photocatalytic degradation of MB dyes among all the dyes. Therefore, green synthesized ZnO/CuO nanocomposite could be used as an efficient photocatalyst for the degradation of various toxic dyes. The mineralization of different dyes using ZnO/CuO nanocomposite has been examined by FTIR analysis. Furthermore, the mineralization of MB dye has been done by total organic carbon (TOC) measurements.
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Affiliation(s)
- Sapna Yadav
- Department of Chemistry, Miranda House, University of Delhi, Patel Chest Marg, New Delhi, 110007, India
| | - Nutan Rani
- Department of Chemistry, Miranda House, University of Delhi, Patel Chest Marg, New Delhi, 110007, India
| | - Kalawati Saini
- Department of Chemistry, Miranda House, University of Delhi, Patel Chest Marg, New Delhi, 110007, India.
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Yadav S, Shakya K, Gupta A, Singh D, Chandran AR, Varayil Aanappalli A, Goyal K, Rani N, Saini K. A review on degradation of organic dyes by using metal oxide semiconductors. Environ Sci Pollut Res Int 2023; 30:71912-71932. [PMID: 35595896 DOI: 10.1007/s11356-022-20818-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Accepted: 05/10/2022] [Indexed: 06/14/2023]
Abstract
The discharge of organic dye pollutants in natural water bodies has put forward a big challenge of providing clean water to a large part of the population. As the population is increasing with time, only underground water is not sufficient to complete the water requirements of everyone everywhere. Purification of wastewater and its reuse is the only way to fulfill the water needs. Nanotechnology has been used very efficiently for wastewater treatment via photocatalytic degradation of dye molecules. In the past few years, a lot of investigations have been done to enhance the photocatalytic activity of metal oxide semiconductors for water purification. In this review, we have discussed the different methods of synthesis of various metal oxide semiconductor nanoparticles, energy band gap, their role as efficient photocatalysts, radiations used for photocatalytic reactions, and their degradation efficiency to degrade the dye pollutants. We have also discussed the nanocomposites of metal oxide with graphene. These nanocomposites have been utilized as the efficient photocatalyst due to unique characteristics of graphene such as extended range of light absorption, separation of charges, and high capacity of adsorption of the dye pollutants.
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Affiliation(s)
- Sapna Yadav
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | - Kriti Shakya
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | - Aarushi Gupta
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | - Divya Singh
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | - Anjana R Chandran
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | | | - Kanika Goyal
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | - Nutan Rani
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India
| | - Kalawati Saini
- Department of Chemistry, Miranda House, University of Delhi, New Delhi-110007, India.
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Yadav S, Rani N, Saini K. Synthesis and characterization of NiO/Cr 2O 3 nanocomposite with effective sunlight driven photocatalytic degradation of organic dyes. Environ Sci Pollut Res Int 2023; 30:71957-71969. [PMID: 36040696 DOI: 10.1007/s11356-022-22746-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Accepted: 08/22/2022] [Indexed: 06/14/2023]
Abstract
In this paper, nanocomposite NiO/Cr2O3 has been synthesized by a simple chemical reduction method to study its photocatalytic activity under sunlight irradiation. Various advanced analytical techniques including powder X-ray diffraction (PXRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), energy-dispersive spectroscopy (EDS), elemental mapping, Fourier transform infrared spectroscopy (FTIR), and UV-visible spectroscopy have been utilized to characterize the synthesized NiO/Cr2O3 nanocomposite. SEM images show the sheet-shaped morphology of NiO/Cr2O3 nanocomposite. These sheets have a rough surface with nano to micro size cracks. These cracks play important role in the enhancement of photocatalytic activity by increasing surface active sites for the adsorption of dye molecules on the surface of the photocatalyst. The organic dyes crystal violet (CV) and methylene blue (MB) have been chosen to study the photocatalytic behavior of NiO/Cr2O3 nanocomposite under sunlight irradiation. The photocatalytic efficiency of NiO/Cr2O3 nanocomposite has been obtained 88.47% and 93.63% against crystal violet and methylene blue respectively. The results of the photocatalytic kinetics exhibit that degradation rate constant value for crystal violet dye is higher as compared to methylene blue dye. Obtained kinetic results indicate that synthesized nanocomposite acts as an efficient photocatalyst for the degradation of both crystal violet dye and methylene blue dye. NiO/Cr2O3 nanocomposite also exhibited reusability and stability for photocatalytic degradation of both organic dyes. Photoelectrochemical measurements as photocurrent, electrochemical impedance spectroscopy (EIS), and Mott-Schottky plot were also performed for synthesized NiO/Cr2O3 nanocomposite. Consequently, this synthesized NiO/Cr2O3 nanocomposite can be utilized for environmental remediation of harmful dyes.
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Affiliation(s)
- Sapna Yadav
- Department of Chemistry, Miranda House, University of Delhi, Patel Chest Marg, New Delhi, 110007, India
| | - Nutan Rani
- Department of Chemistry, Miranda House, University of Delhi, Patel Chest Marg, New Delhi, 110007, India
| | - Kalawati Saini
- Department of Chemistry, Miranda House, University of Delhi, Patel Chest Marg, New Delhi, 110007, India.
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Rani N, Rawat K, Saini M, Yadav S, Syeda S, Saini K, Shrivastava A. Comparative In Vitro Anticancer Study of Cisplatin Drug with Green Synthesized ZnO Nanoparticles on Cervical Squamous Carcinoma (SiHa) Cell Lines. ACS Omega 2023; 8:14509-14519. [PMID: 37125098 PMCID: PMC10134227 DOI: 10.1021/acsomega.2c08302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Accepted: 03/28/2023] [Indexed: 05/03/2023]
Abstract
In this article, we aimed to develop a unique treatment approach to cure cervical cancer without harming healthy normal cells and overcome the limitations of currently available therapies/treatments. Recently, chemotherapeutics based on metal oxides have gained attention as a promising approach for treating cancer. Herein, ZnO nanoparticles were synthesized with the leaf extract of Azadirachta indica. These green synthesized ZnO nanoparticles were used for a cytotoxic study on the cervical squamous carcinoma cell line SiHa and murine macrophage cell line RAW 264.7. Moreover, a hemolytic assay was performed to check the biocompatibility of ZnO nanoparticles. The biosynthesized ZnO nanoparticles were labeled as L1, L2, L5, and L10 nanoparticles. Various assays like crystal violet, MTT assay, and AO/PI dual staining method were performed to assess the anticancer potential of ZnO. The concentration of ZnO nanoparticles was taken in the range of 100-250 μg/mL in the in vitro anticancer study on SiHa cancer cell lines. The findings of the MTT assay revealed that biosynthesized ZnO nanoparticles exhibited significant cytotoxicity against SiHa cancer cell lines dose-dependently at two incubation times (24 and 48 h). Also, a decrease in cell viability was observed with an increased concentration of ZnO. The IC50 values obtained were 141 μg/mL for L1, 132 μg/mL for L2, 127 μg/mL for L5, and 115 μg/mL for L10 nanoparticles. In addition, cisplatin drug (10 μg/mL) was also used to compare the anticancer activity with the biosynthesized L1, L2, L5, and L10 nanoparticles. The results of the crystal violet assay and AO/PI dual staining method revealed that morphological changes like cell shrinkage, poor cell adhesion, and induction of apoptosis occurred in the SiHa cancer cell lines. Furthermore, the stability of the ZnO nanoparticles at physiological pH has been assessed by recording the UV-visible spectrum at various pH values. Hence, the overall findings suggested that biosynthesized ZnO nanoparticles can be utilized for cervical squamous cancer treatment in addition to the current treatment strategies/techniques.
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Affiliation(s)
- Nutan Rani
- Department
of Chemistry, Miranda House, University
of Delhi, Patel Chest
Marg, New Delhi 110007, India
| | - Kavita Rawat
- Department
of Zoology, University of Delhi, North Campus, New Delhi 110007, India
| | - Mona Saini
- Department
of Chemistry, Miranda House, University
of Delhi, Patel Chest
Marg, New Delhi 110007, India
| | - Sapna Yadav
- Department
of Chemistry, Miranda House, University
of Delhi, Patel Chest
Marg, New Delhi 110007, India
| | - Saima Syeda
- Department
of Zoology, University of Delhi, North Campus, New Delhi 110007, India
| | - Kalawati Saini
- Department
of Chemistry, Miranda House, University
of Delhi, Patel Chest
Marg, New Delhi 110007, India
| | - Anju Shrivastava
- Department
of Zoology, University of Delhi, North Campus, New Delhi 110007, India
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Rani N, Rawat K, Saini M, Shrivastava A, Kandasamy G, Saini K, Maity D. Rod-shaped ZnO nanoparticles: synthesis, comparison and in vitro evaluation of their apoptotic activity in lung cancer cells. Chem Pap 2021. [DOI: 10.1007/s11696-021-01942-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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Kandasamy G, Sudame A, Luthra T, Saini K, Maity D. Functionalized Hydrophilic Superparamagnetic Iron Oxide Nanoparticles for Magnetic Fluid Hyperthermia Application in Liver Cancer Treatment. ACS Omega 2018; 3:3991-4005. [PMID: 30023884 PMCID: PMC6044893 DOI: 10.1021/acsomega.8b00207] [Citation(s) in RCA: 75] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2018] [Accepted: 03/29/2018] [Indexed: 05/19/2023]
Abstract
In this work, we report the synthesis of hydrophilic and surface-functionalized superparamagnetic iron oxide nanoparticles (SPIOs) to utilize them as nanomedicines for treating liver cancer via magnetic fluid hyperthermia (MFH)-based thermotherapy. For this purpose, initially, we have synthesized the SPIOs through co-precipitation/thermolysis methods, followed by in situ surface functionalization with short-chained molecules, such as 1,4-diaminobenzene (14DAB), 4-aminobenzoic acid (4ABA) and 3,4-diaminobenzoic acid (34DABA) and their combination with terephthalic acid (TA)/2-aminoterephthalic acid (ATA)/trimesic acid (TMA)/pyromellitic acid (PMA) molecules. The as-prepared SPIOs are investigated for their structure, morphology, water dispersibility, and magnetic properties. The heating efficacies of the SPIOs are studied in calorimetric MFH (C-MFH) with respect to their concentrations, surface coatings, dispersion medium, and applied alternating magnetic fields (AMFs). Although all of the as-prepared SPIOs have exhibited superparamagnetic behavior, only 14DAB-, 4ABA-, 34DABA-, and 4ABA-TA-coated SPIOs have shown higher magnetization values (Ms = 55-71 emu g-1) and good water dispersibility. In C-MFH studies, 34DABA-coated SPIO-based aqueous ferrofluid (AFF) has revealed faster thermal response to the applied AMF and reached therapeutic temperature even at the lowest concentration (0.5 mg mL-1) compared with 14DAB-, 4ABA-, and 4ABA-TA-coated SPIO-based AFFs. Moreover, 34DABA-coated SPIO-based AFF has exhibited high heating efficacies (i.e., specific absorption rate/intrinsic loss power values of 432.1 W gFe-1/5.2 nHm2 kg-1 at 0.5 mg mL-1), which could be mainly due to (i) enhanced π-π conjugation paths of surface-attached 34DABA coating molecules because of intrafunctional group attractions and (ii) improved anisotropy from the formation of clusters/linear chains of the SPIOs in ferrofluid suspensions, owing to interfunctional group attractions/interparticle interactions. Moreover, the 34DABA-coated SPIOs have demonstrated (i) very good cytocompatibility for 24/48 h incubation periods and (ii) higher killing efficiency of 61-88% (via MFH) in HepG2 liver cancer cells as compared to their treatment with only AMF/water-bath-based thermotherapy. In summary, the 34DABA-coated SPIOs are very promising heat-inducing agents for MFH-based thermotherapy and thus could be used as effective nanomedicines for cancer treatments.
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Affiliation(s)
- Ganeshlenin Kandasamy
- Department
of Mechanical Engineering and Department of Chemistry, Shiv Nadar University, Dadri 201314, Uttar Pradesh, India
| | - Atul Sudame
- Department
of Mechanical Engineering and Department of Chemistry, Shiv Nadar University, Dadri 201314, Uttar Pradesh, India
| | - Tania Luthra
- Department
of Mechanical Engineering and Department of Chemistry, Shiv Nadar University, Dadri 201314, Uttar Pradesh, India
| | - Kalawati Saini
- Department
of Chemistry, Miranda House, Delhi University, New Delhi 110007, India
| | - Dipak Maity
- Department
of Mechanical Engineering and Department of Chemistry, Shiv Nadar University, Dadri 201314, Uttar Pradesh, India
- E-mail:
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Saini K, Joseph F, Ramanan A, Sharma Bhatia S. Electrochemical Synthesis of A Oxalate-Linked Copper (II) Metal Organic Frameworks: X-ray Crystallographic Structure and its Magnetic Properies. ACTA ACUST UNITED AC 2017. [DOI: 10.1016/j.matpr.2017.06.235] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Brown P, Talbot E, Wood T, Egan M, Wu J, Saini K, Kumar N, Bain C, Badyal J. Controlling picolitre droplet impact dynamics by tailoring the solid subsurface. Colloids Surf A Physicochem Eng Asp 2015. [DOI: 10.1016/j.colsurfa.2015.04.047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Tutt A, Balmana J, Robson M, Garber J, Kaufman B, Geyer C, Saini K, Stuart M, Mann H, Fasching P. Olympia, Neo-Olympia and Olympiad: Randomized Phase III Trials of Olaparib in Patients (Pts) with Breast Cancer (Bc) and a Germline Brca1/2 Mutation (Gbrcam). Ann Oncol 2014. [DOI: 10.1093/annonc/mdu327.76] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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Desmedt C, Metzger O, Fumagalli D, Brown D, Singhal S, Vincent D, Adnet PY, Smeets D, Bertucci F, Galant C, Salgado R, Veys I, Saini K, Pruneri G, Krop I, Winer E, Michiels S, Piccart M, Lambrechts D, Larsimont D, Viale G, Sotiriou C. Abstract P3-05-03: Characterization of PIK3CA mutations in lobular breast cancer. Cancer Res 2012. [DOI: 10.1158/0008-5472.sabcs12-p3-05-03] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background: Invasive lobular carcinoma (ILC) is the second most common breast cancer (BC) histotype, after invasive ductal carcinoma (IDC), representing ∼10-15% of the global BC population. The vast majority of ILC are estrogen receptor (ER)-positive. PIK3CA has been reported to be the most frequently mutated gene in ER-positive BC. However, until now PIK3CA mutations have mainly been described in IDC. In this study, we sought to characterize the type, prevalence, intra-patient (pt) mutational heterogeneity, and the association with transcriptomic phenotype and clinical outcome of PIK3CA mutations in ILC.
Methods: Gene expression data (HG-U133 Plus2.0) was generated from frozen samples of 116 ILC (primary tumors). For the same series, PIK3CA mutation profiling (Sequenom) was performed on at least 2 formalin-fixed paraffin embedded (FFPE) tissue blocks of the primary tumor for 102 cases, and on the only available block for the remaining 14 cases. Matched local recurrence (LR) and multiple metastatic (M) samples were also characterized for 3 and 8 pts respectively. For the transcriptomic and survival analyses, we evaluated the association between PIK3CA mutation status and gene signatures recapitulating important biological processes, and invasive disease-free & overall survival, respectively.
Results: PIK3CA mutations were detected in the primary tumor of 40/116 (35%) ILC pts: 14 (35%) mutations in the helical domain and 25 (62.5%) in the kinase domain. PIK3CA analysis in different blocks from the same primary tumors revealed a mutational heterogeneity in 7/102 (7%) cases. There was a discordance between primary and LR samples in 1/3 patients with LR, with a mutation reported in the primary but in not the LR. In 3/8 pts for which M samples were available, we observed intra-pt heterogeneity. In the first pt, a mutation in the kinase domain was reported only in 1/2 investigated blocks from the primary tumor, and in only 1/2 liver Ms. In the second pt, a mutation in the helical domain was found in the primary tumor and in the LR but not in the pleura M. In the third pt, although no mutation was observed in the primary tumor, a mutation in the helical domain was found in the M of the epiploon, but not in the Ms from the diaphragm or the ovary. Transcriptomic analyses revealed that primary tumors with a PIK3CA mutation in the helical domain were associated with increased levels of 2 stroma signatures (Bonferroni p-val: PLAU sign -Desmedt 2008–0.042 and DCN sign- Farmer 2009 – 0.048) compared to tumors without mutation. The survival analyses did not reveal any significant difference in survival between pts with and without a PIK3CA mutation.
Conclusions: This study represents the largest series described so far which investigated PIK3CA mutations in ILC. The incidence of PIK3CA mutations reported here is similar to the one reported for IDC. The investigation of multiple tumor samples per pt revealed intra-tumor as well as primary/recurrence heterogeneity. To get a definitive answer on the prognostic role of PIK3CA mutation in ILC, we are currently performing a PIK3CA mutation profiling study (Sequenom) on a series of ∼1000 consecutive ILC with long-term follow up (Iorfida et al. 2012); results will be available by SABCS2012.
Citation Information: Cancer Res 2012;72(24 Suppl):Abstract nr P3-05-03.
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Affiliation(s)
- C Desmedt
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - O Metzger
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - D Fumagalli
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - D Brown
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - S Singhal
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - D Vincent
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - P-Y Adnet
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - D Smeets
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - F Bertucci
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - C Galant
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - R Salgado
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - I Veys
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - K Saini
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - G Pruneri
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - I Krop
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - E Winer
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - S Michiels
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - M Piccart
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - D Lambrechts
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - D Larsimont
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - G Viale
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
| | - C Sotiriou
- Institut Jules Bordet, Brussels, Belgium; Dana-Farber Cancer Institute, Boston; Vesalius Research Centre, VIB, Leuven, Belgium; Institut Paoli Calmettes, Marseille, France; Université Catholique de Louvain, Brussels, Belgium; European Institute of Oncology, University of Milan, Milan, Italy
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Bucur A, Fumagalli D, Desmedt C, Vdovjak R, Loi S, Saini K, Doci S, Schenk B, Sotiriou C, Piccart M. 2161 POSTER INTEGRATE: Driving Excellence in Integrative Cancer Research Through Innovative Biomedical Infrastructures. Eur J Cancer 2011. [DOI: 10.1016/s0959-8049(11)71051-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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13
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Sajeevan KV, Lakshmiah KC, Rani A, Suresh TM, Ankit J, Saini K, Tejinder S, Batra U, Anupama G. The efficacy, toxicity profile and tolerability of cisplatin plus 5-FU versus docetaxel plus carboplatin as induction therapy in locally advanced oral cancer: An experience from a tertiary cancer centre from South India. J Clin Oncol 2008. [DOI: 10.1200/jco.2008.26.15_suppl.17017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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14
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Batra U, Dasappa L, Lakshmiah KC, Babu K, Saini K, Jain A, Sajeevan KV, Singh T, Bapsy PP. Dose escalation of imatinib in CML patients with sub-optimal response to conventional dosage: Is it worth it? J Clin Oncol 2008. [DOI: 10.1200/jco.2008.26.15_suppl.18026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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15
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Jain A, Bapsy PP, Dasappa L, Babu G, Batra U, Sajeevan KV, Saini K, Singh T, Attili S. Nail changes induced by weekly paclitaxel as a surrogate marker for response assessment in patients with metastatic breast cancer. J Clin Oncol 2008. [DOI: 10.1200/jco.2008.26.15_suppl.12019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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16
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Singh T, Sajeevan KV, Satheesh CT, Ankith J, Batra U, Saini K, Anupama G, Govindbabu K, Lakshmiah KC, Lokanatha D. Use of long term venous access in cancer patients: Experience from a tertiary cancer centre in South India. J Clin Oncol 2008. [DOI: 10.1200/jco.2008.26.15_suppl.20710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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17
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Malik R, Priyadarsiny P, Shirumalla R, Soni R, Ray A, Saini K. Gene expression profile of ovalbumin-induced lung inflammation in a murine model of asthma. J Investig Allergol Clin Immunol 2008; 18:106-112. [PMID: 18447139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/26/2023] Open
Abstract
BACKGROUND Asthma is a chronic inflammatory disease that is associated with airway hyperresponsiveness, tissue remodeling, and airway obstruction, and that involves coordinate expression of multiple inflammatory genes in the lungs. OBJECTIVE To evaluate the gene expression pattern in a mouse model of asthma and assess the effect of a new drug, R142571, on the gene expression profile. METHODS Lung tissue from ovalbumin-sensitized mice was used to examine gene expression on the CodeLink oligonucleotide mouse 20 K bioarray platform. Data were validated for some genes by semiquantitative reverse-transcriptase polymerase chain reaction. RESULTS Of the 19,736 genes represented on the microarray, expression of 378 genes was differentially regulated (215 upregulated and 163 downregulated), with at least a 2-fold change in expression (P <.05). The differentially regulated transcripts included genes known to be involved in several different biological processes, including signaling, DNA-dependent transcriptional regulation, immune response, proteolysis, and peptidolysis. Cluster analysis of the differentially regulated genes showed that at least 16 were downregulated by R142571 treatment at both of the doses used (1 and 10 mg/kg). In addition, 46 and 29 genes were downregulated at doses of 10 mg/kg and 1 mg/kg, respectively, as compared to the animals treated with vehicle. CONCLUSION The cytokine expression pattern in our data, suggests that the murine model exhibits a predominantlyT helper 2-type response, as observed in asthmatic human subjects. Based on this study, we suggest that this mouse model would be an appropriate system for screening new drug molecules for treatment of atopic asthma.
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Affiliation(s)
- R Malik
- Department of Biotechnology, New Drug Discovery Research, Ranbaxy Research Laboratories, Gurgaon, India
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18
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Lamba M, Mukherjee G, Saini K, Ramachandra C, Rao C, Kumar R, Bapsy P, Babu K, Attili S, Batra U. Clinico-pathologic pattern of gastrointestinal stromal tumors (GIST) in southern India: A single-institution experience. J Clin Oncol 2007. [DOI: 10.1200/jco.2007.25.18_suppl.20531] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
20531 Background: There have been major advances in understanding the behavioral pattern, pharmacological intervention, and clinical response of GIST; yet Indian data in this regard is sparse. This study analyses the clinico-pathologic features in 36 patients (21 male, 15 female) of GIST seen at our institution. Methods: GIST was defined as a mesenchymal spindle or epithelioid cell lesion arising in the GI tract with CD117 immuno-reactivity. Retrospective data from January 03 to March 06 was analyzed for age, tumor site, morphology, immuno- reactivity, prognostic factors, response to treatment (by RECIST), and recurrence or metastasis. All patients had surgery; those with residual, recurrent, or metastatic disease got imatinib till tumor progression. Results: GIST presented at a mean age of 48.2 yrs (SD 6.4, range 34–65). The mean tumor size was 13.9 cm (range 2–42). The most common site was the small intestine (ileum 8, jejunum 7, duodenum 4). 24 patients (66.7%) had localized disease at baseline. Of these, 14 had local recurrence after surgery, and were given imatinib. 5 of them are in complete remission, 4 had partial response (PR), 3 patients died, and 2 had stable disease. Most patients with recurrent GIST had a mitotic rate of >10/50hpf. 8 patients developed metastasis, and received imatinib. Of these, 2 got a PR, 3 had progressive disease and died, and 3 had stable disease. 12 patients (33.3%) had metastasis at baseline (to liver and abdominal cavity), and underwent debulking. Of these, 6 patients with stable disease are on treatment with imatinib, 3 died and 3 were lost to follow-up. Conclusions: Average age of presentation was less than in Western reports. The commonest site was the small intestine as opposed to stomach in western literature. Mitotic rate was a better prognostic factor than gross tumor size. GIST with a mixed cell morphology showed aggressive behavior. Imatinib mesylate is useful in the post-operative management of GIST. [Table: see text] No significant financial relationships to disclose.
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Affiliation(s)
- M. Lamba
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - G. Mukherjee
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - K. Saini
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | | | - C. Rao
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - R. Kumar
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - P. Bapsy
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - K. Babu
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - S. Attili
- Kidwai Memorial Institute of Oncology, Bangalore, India
| | - U. Batra
- Kidwai Memorial Institute of Oncology, Bangalore, India
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19
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Mohajeri MH, Madani R, Saini K, Lipp HP, Nitsch RM, Wolfer DP. The impact of genetic background on neurodegeneration and behavior in seizured mice. Genes Brain Behav 2004; 3:228-39. [PMID: 15248868 DOI: 10.1111/j.1601-1848.2004.00073.x] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
We used pilocarpine-induced seizures in mice to determine the impact of genetic background on the vulnerability of hippocampal neurons and associated changes of behavioral performance. The susceptibility of hippocampal neurons to seizure-induced cell death paralleled the severity of the seizures and depended on genetic background. Hippocampal neurons in C57BL/6 mice were most resistant to cell death, whereas they were highly vulnerable in FVB/N mice. The degree of neuronal degeneration in F1 hybrid mice obtained by crossing the two strains was at an intermediate level between the parent strains. Two weeks after the severe seizures, performance in a water-maze place navigation task showed a bimodal distribution. Seventeen of 19 (90%) F1 mice were completely unable to learn while the other two learned reasonably well. Of 28 C57BL/6 mice with similarly severe seizures, six were as strongly impaired as their F1 counterparts (22%). The remaining 22 performed normally, indicating a much lower probability of C57BL/6 mice to be affected. Treated mice showed a deficit of open-field exploration which was strongly correlated with the impairment in the place navigation task and was again more severe in F1 mice. Our results show that the vulnerability of hippocampal neurons to pilocarpine-induced seizures, as well as the associated behavioral changes, depended on genetic background. Furthermore, they confirm and extend our earlier finding that a relatively modest reduction of hippocampal cell death can be associated with dramatic changes of behavioral performance and emphasize the importance of tightly-controlled genetic backgrounds in biological studies.
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Affiliation(s)
- M H Mohajeri
- Division of Psychiatry Research and Institute of Anatomy, University of Zurich, Switzerland.
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20
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Leuba G, Saini K, Zimmermann V, Giannakopoulos P, Bouras C. Mild amyloid pathology in the primary visual system of nonagenarians and centenarians. Dement Geriatr Cogn Disord 2001; 12:146-52. [PMID: 11173888 DOI: 10.1159/000051249] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
In order to study the patterns of Alzheimer disease (AD)-related pathology in the primary visual system of the oldest old, we performed a quantitative analysis of senile plaques (SP), diffuse beta amyloid (A beta) deposit and neurofibrillary tangle (NFT) distribution in primary area 17, and a semi-quantitative analysis in the dorsal lateral geniculate nucleus (LGN), lateral inferior pulvinar (LIP) and superior colliculus (SC) of 21 individuals aged between 93 and 102 years. Among them, 10 cases were considered as non-demented (ND), while 9 presented very mild cognitive impairment (VMCI), and 2 cases had a clinical diagnosis of AD. Silver methenamine and Gallyas staining, A beta and tau immunostaining revealed the distribution of AD lesions. In primary area 17, most cases, either ND or with VMCI displayed a low to medium number of SP. There was no significant difference in SP and A beta deposit densities between ND and VMCI groups. On the whole, 0.4--2.4% of the cross-sectional cortical area was covered with A beta deposits. Only 6 cases, either ND or with VMCI, were totally devoid of SP and diffuse A beta deposits. Among the subcortical structures, the LIP and SC exhibited low densities of SP and A beta deposits in about half of the ND and VMCI cases, while the LGN was totally spared. NFT were almost absent in area 17 and subcortical nuclei of ND and VMCI cases. These data imply that the ageing of the primary visual system in ND and VMCI nonagenarians and centenarians is characterised by the frequent development of mild amyloid pathology in area 17 in the absence of NFT. In agreement with previous studies in very old cohorts, they also suggest that amyloid deposition is not related to the early stages of the dementia process in the oldest old.
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Affiliation(s)
- G Leuba
- University Psychogeriatrics Hospital, Lausanne, Switzerland.
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21
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Wang DS, Rieger-Christ K, Latini JM, Moinzadeh A, Stoffel J, Pezza JA, Saini K, Libertino JA, Summerhayes IC. Molecular analysis of PTEN and MXI1 in primary bladder carcinoma. Int J Cancer 2000. [PMID: 11058880 DOI: 10.1002/1097-0215(20001115)88:4<620::aid-ijc16>3.0.co;2-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Loss of heterozygosity (LOH) on 10q is associated with late-stage events in urothelial neoplastic progression. The tumor suppressor gene PTEN, which is mutated or homozygously deleted in numerous cancers, maps to a region of 10q within the reported region of minimal loss in bladder tumors. In two recent studies alterations in the PTEN gene occur at a low frequency in bladder tumors displaying 10q LOH. We have screened 35 late-stage bladder tumors for mutations in PTEN and MXI1, both genes mapping to chromosome 10q. Using single-strand conformation polymorphism analysis, we identified 6 tumors harboring mutations in PTEN and 2 additional tumors displaying homozygous deletion at this locus. No MXI1 mutations were identified within the same tumor panel. Of 16 bladder tumor cell lines analyzed, 2 showed homozygous deletion of PTEN and 3 harbored point mutations resulting in an amino acid change. Two cell lines harbored missense mutations in MXI1. We report a significantly higher frequency of PTEN alterations in bladder carcinoma (23%) than was previously recorded, with no accompanying mutations in the MXI1 gene.
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Affiliation(s)
- D S Wang
- Department of Urology, Lahey Clinic, Burlington, MA, USA
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22
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Connors N, Petersen L, Hughes R, Saini K, Olewinski R, Salmon P. Residual fructose and osmolality affect the levels of pneumocandins B0 and C0 produced by Glarea lozoyensis. Appl Microbiol Biotechnol 2000; 54:814-8. [PMID: 11152074 DOI: 10.1007/s002530000447] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Abstract
A high total pneumocandin titer (B0 + C0) with a low percentage of the structural isomer pneumocandin C0 was achieved by carrying out fermentations of Glarea lozoyensis at a high residual fructose concentration (125 g/l initial). When the fermentation was carried out at a low residual fructose concentration (40 g/l initial), pneumocandin production increased by 34%. However, a disproportionate increase in the level of pneumocandin C0 synthesized (250% increase vs 30% increase for pneumocandin B0) was observed. Midcycle addition of 150 mM NaCl or 116 mM Na2SO4 to low residual fructose fermentations returned the titer and isomer levels to those seen for the high residual fructose fermentation. The increase in pneumocandin C0 synthesis under low residual fructose conditions appears to be linked to the increase in the synthesis of trans-4 hydroxyproline, with the synthesis of trans-3 hydroxyproline remaining unaffected. This suggests that the formation of pneumocandin C0 is the result of a misincorporation of trans-4 hydroxyproline instead of trans-3 hydroxyproline by the pneumocandin peptide synthetase, and that the amount of trans-4 hydroxyproline formed dictates the frequency of this misincorporation.
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Affiliation(s)
- N Connors
- Bioprocess Research and Development, Merck Research Laboratories, Rahway, NJ 07065, USA.
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23
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Abstract
Loss of heterozygosity (LOH) on 10q is associated with late-stage events in urothelial neoplastic progression. The tumor suppressor gene PTEN, which is mutated or homozygously deleted in numerous cancers, maps to a region of 10q within the reported region of minimal loss in bladder tumors. In two recent studies alterations in the PTEN gene occur at a low frequency in bladder tumors displaying 10q LOH. We have screened 35 late-stage bladder tumors for mutations in PTEN and MXI1, both genes mapping to chromosome 10q. Using single-strand conformation polymorphism analysis, we identified 6 tumors harboring mutations in PTEN and 2 additional tumors displaying homozygous deletion at this locus. No MXI1 mutations were identified within the same tumor panel. Of 16 bladder tumor cell lines analyzed, 2 showed homozygous deletion of PTEN and 3 harbored point mutations resulting in an amino acid change. Two cell lines harbored missense mutations in MXI1. We report a significantly higher frequency of PTEN alterations in bladder carcinoma (23%) than was previously recorded, with no accompanying mutations in the MXI1 gene.
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Affiliation(s)
- D S Wang
- Department of Urology, Lahey Clinic, Burlington, MA, USA
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24
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Kövari E, Leuba G, Savioz A, Saini K, Anastasiu R, Miklossy J, Bouras C. Familial frontotemporal dementia with ubiquitin inclusion bodies and without motor neuron disease. Acta Neuropathol 2000; 100:421-6. [PMID: 10985702 DOI: 10.1007/s004010000208] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Frontotemporal dementia (FTD) is the second most common degenerative dementia after Alzheimer's disease and its Lewy body variant. Clinical pathology can be subdivided in three main neuropathological subtypes: frontal lobe dementia, Pick's disease and FTD with motor neuron disease (MND), all characterised by distinct histological features. Until recently the presence of ubiquitin-positive intraneuronal inclusions in the dentate gyrus, and the temporal and frontal cortex was usually associated with the MND type. Such inclusions were also observed in a few sporadic cases of FTD without or with parkinsonism (FTDP) in the absence of MND. We present here clinical, neuropathological and immunohistochemical data about a Swiss FTD family with FTDP-like features but without MND. Spongiosis and mild gliosis were observed in the grey matter. No neurofibrillary tangles, Pick bodies, Lewy bodies, senile plaques or prion-positive signals were present. However, ubiquitin-positive intracytoplasmic inclusions were detected in various structures but predominantly in the dentate gyrus. These observations support the existence of a familial form of FTDP with ubiquitin-positive intracytoplasmic inclusions (Swiss FTDP family).
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Affiliation(s)
- E Kövari
- Department of Psychiatry, University of Geneva School of Medicine, Switzerland.
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25
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26
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Savioz A, Kövari E, Anastasiu R, Rossier C, Saini K, Bouras C, Leuba G. Search for a mutation in the tau gene in a Swiss family with frontotemporal dementia. Exp Neurol 2000; 161:330-5. [PMID: 10683298 DOI: 10.1006/exnr.1999.7263] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Frontotemporal dementia (FTD) is considered to have a heterogeneous aetiology. To date the tau gene located on chromosome 17 has been shown to be implicated in the pathogenesis of several FTD families with parkinsonism, the so called FTDP-17 families. The mutations reported so far are located within exons 9 to 13, a region coding for the microtubule-binding sites. They are causing various cytoskeletal disturbances. We are describing here the main clinical and neuropathological features of a Swiss FTD family with members presenting a FTDP-like clinical phenotype. However, if we except two silent polymorphic sites at position 227 and 255 in exon 9, neither a known FTDP-17 mutation nor a novel one was detected in this region of the tau gene. Thus, the existence of a yet unknown mechanism of neurodegeneration, other than via mutations near or within the microtubule-binding sites, or the exon 10 splice sites of the tau gene, has to be considered to explain dementia in this family. A mutation in another gene is still possible.
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Affiliation(s)
- A Savioz
- Division of Neuropsychiatry, Department of Psychiatry, University of Geneva School of Medecine, Chêne-Bourg, Geneva, CH-1225, Switzerland
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27
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Savioz A, Leuba G, Forsell C, Lilius L, Rossier C, Saini K, Bouras C, Lannfelt L. No detected mutations in the genes for the amyloid precursor protein and presenilins 1 and 2 in a swiss early-onset Alzheimer's disease family with a dominant mode of inheritance. Dement Geriatr Cogn Disord 1999; 10:431-6. [PMID: 10559555 DOI: 10.1159/000017185] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
Mutations have been found in more than a hundred early-onset families with Alzheimer's disease (AD) in the genes for the amyloid precursor protein, presenilin 1 and presenilin 2. The object of our investigation was to identify if these mutations or novel ones were operating in a Swiss early-onset AD family (mean age of onset: 53.3 years) with 7 members available, all neuropathologically confirmed. No known or new mutations were detected. Thus, our data support the existence of a yet unknown mutation, or other genes, contributing to familial early-onset AD. CopyrightCopyright 1999S.KargerAG,Basel
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Affiliation(s)
- A Savioz
- Department of Psychiatry, University of Geneva School of Medicine, Chêne-Bourg, Switzerland
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28
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Ukanda U, Sharma U, Saini K. Care provided by 'skill mix' and 'informal care givers' to critically ill patients. Nurs J India 1999; 90:53-4. [PMID: 10795284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Affiliation(s)
- U Ukanda
- College of Nursing, CMC, Ludhiana
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Leuba G, Kraftsik R, Saini K. Quantitative distribution of parvalbumin, calretinin, and calbindin D-28k immunoreactive neurons in the visual cortex of normal and Alzheimer cases. Exp Neurol 1998; 152:278-91. [PMID: 9710527 DOI: 10.1006/exnr.1998.6838] [Citation(s) in RCA: 67] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The distribution of parvalbumin (PV), calretinin (CR), and calbindin (CB) immunoreactive neurons was studied with the help of an image analysis system (Vidas/Zeiss) in the primary visual area 17 and associative area 18 (Brodmann) of Alzheimer and control brains. In neither of these areas was there a significant difference between Alzheimer and control groups in the mean number of PV, CR, or CB immunoreactive neuronal profiles, counted in a cortical column going from pia to white matter. Significant differences in the mean densities (numbers per square millimeter of cortex) of PV, CR, and CB immunoreactive neuronal profiles were not observed either between groups or areas, but only between superficial, middle, and deep layers within areas 17 and 18. The optical density of the immunoreactive neuropil was also similar in Alzheimer and controls, correlating with the numerical density of immunoreactive profiles in superficial, middle, and deep layers. The frequency distribution of neuronal areas indicated significant differences between PV, CR, and CB immunoreactive neuronal profiles in both areas 17 and 18, with more large PV than CR and CB positive profiles. There were also significantly more small and less large PV and CR immunoreactive neuronal profiles in Alzheimer than in controls. Our data show that, although the brain pathology is moderate to severe, there is no prominent decrease of PV, CR and CB positive neurons in the visual cortex of Alzheimer brains, but only selective changes in neuronal perikarya.
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Affiliation(s)
- G Leuba
- University Psychogeriatrics Hospital, Lausanne, CH-1008, Switzerland
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Abstract
Several studies have demonstrated that three calcium-binding proteins parvalbumin (PV), calbindin D-28k (CB) and calretinin (CR) mark distinct subsets of cortical interneurons. This study demonstrates, in cortical and subcortical visual structures, the coexistence of two calcium-binding proteins in some neuronal subpopulations. The human visual cortex (VC), lateral geniculate nucleus (LGN). lateral inferior pulvinar (LIP) and superior colliculus (SC) were examined by a double-labelling immunocytochemical technique. The VC showed mostly separate populations of PV, CB and CR immunoreactive (-ir) interneurons, but also small populations of double-stained PV + CR and CR + CB neurons, while PV + CB neurons were less frequent. An average of 2.5% of the immunoreactive neurons were double-stained for PV + CR and 7.1% for CR + CB in area 17, while this percentage was slightly higher in association area 18 (3.3 and 7.4%, respectively). In the LGN and LIP, double-stained neurons were scarce, but in the fibre capsule of these nuclei, as well as in the optic radiation (OR) and white matter underlying area 17, both double-stained PV + CR or CR + CB and separate populations of PV-ir, CB-ir and CR-ir neurons and fibres were observed. Unlike the thalamic regions, the SC showed some double-stained PV + CR and CR + CB neurons, scattered both in the superficial and deep layers. These findings are discussed in the light of similar observations recently reported from other regions of the human brain.
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Affiliation(s)
- G Leuba
- University Psychogeriatrics Hospital, Lausanne-Prilly, Switzerland.
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Abstract
The distribution of neurons and fibers immunoreactive (ir) to the three calcium-binding proteins parvalbumin (PV), calbindin D-28k (CB), and calretinin (CR) was studied in the human lateral geniculate nucleus (LGN), lateral inferior pulvinar, and optic radiation, and related to that in the visual cortex. In the LGN, PV, CR, and CB immunoreactivity was present in all laminae, slightly stronger in the magnocellular than in the parvocellular laminae for CB and CR. PV-ir puncta, representing transversally cut axons, and CR-ir fibers were revealed within the laminae and interlaminar zones, and just beyond the outer border of lamina 6 in the geniculate capsule. In the optic radiation both PV- and CR-immunoreactive neurons, puncta, and fibers were present. CB immunoreactivity was revealed in neurons of all laminae of the lateral geniculate nucleus, including S lamina and interlaminar zones. There were hardly any CB-ir puncta or fibers in the laminae, interlaminar zones, geniculate capsule, or optic radiation. In the lateral inferior pulvinar, immunoreactive neurons for the three calcium-binding proteins were present in smaller number than in the LGN, as well as PV-ir puncta and CR-ir fibers within the nucleus and in the pulvinar capsule. In the white matter underlying area 17, fibers intermingled with a few scattered neurons were stained for both PV and CR, but very rarely for CB. These fibers stopped at the limit between areas 17 and 18. Area 17 showed a dense plexus of PV-ir puncta and neurons in the thalamo-receptive layer IV and CR-ir puncta and neurons both in the superficial layers I-II, IIIC, and in layer VA. Cajal-Retzius CR-ir neurons were present in layer I. CB-ir puncta were almost confined to layer I-III and CB-ir neurons to layer II. Finally the superior colliculus exhibited mostly populations of PV and CR pyramidal-like immunoreactive neurons, mainly in the intermediate tier. These data suggest that in the visual thalamus most calcium-binding protein immunoreactive neurons project to the visual cortex, while in the superior colliculus a smaller immunoreactive population represent projection neurons.
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Affiliation(s)
- G Leuba
- University Psychogeriatrics Hospital, Lausanne-Prilly, Switzerland
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Leuba G, Lannfelt L, Forsell C, Lilius L, Schwed P, Baeriswyl F, Saini K. 241 Early onset familial Alzheimer's disease with an apoE4 genotype but without APP mutation : Description of the pedigree and clinicopathological data. Neurobiol Aging 1996. [DOI: 10.1016/s0197-4580(96)80243-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Gupta K, Chopra BK, Saini K, Bhardwaj BL. Primary plasma cell leukaemia--a case report. J Assoc Physicians India 1996; 44:53-5. [PMID: 8773097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- K Gupta
- Govt. Medical College, Patiala
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Abstract
Subcortical visual centres such as the lateral geniculate nucleus, the lateral inferior pulvinar and the superior colliculus, together with the primary visual cortex and its adjacent white matter, were studied in 12 Alzheimer brains and five age-matched controls. The periodic acid methenamine technique was used for the demonstration of senile plaques and the Gallyas technique for neurofibrillary tangles and neuritic threads in the neuropil. In the lateral geniculate nucleus and inferior pulvinar, the presence of periodic acid methenamine-positive senile plaques was observed in variable numbers in all Alzheimer cases. In the lateral geniculate nucleus, senile plaques were encountered more often in parvocellular than in magnocellular layers, in the interlaminar zones, in the optic radiation and in the adjacent pre-geniculate nucleus. Gallyas staining did not reveal any neurofibrillary tangles, neuritic threads or neuritic plaques, meaning that in this thalamic region there are mainly amyloid deposits without neuritic degeneration. In the superior colliculus both amyloid and neuritic plaques, as well as neurofibrillary tangles and neuritic threads were encountered in the superficial and deep layers. In the primary visual cortex, all types of senile plaques were observed as well as a rather high number of neurofibrillary lesions in pyramidal neurons, mainly in layers 5 and 6, but also in several types of non-pyramidal neurons. In the underlying white matter there was a morphologically heterogeneous population of neurofibrillary tangle-bearing neurons and a considerable number of threads representing degenerating axons, suggesting that degeneration could follow corticosubcortical connections. These data demonstrate that lesions in the primary visual structures and pathways are more prevalent than previously observed and could partly explain the visual disturbances in Alzheimer's disease.
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Affiliation(s)
- G Leuba
- University Psychogeriatrics Hospital, Lausanne, Switzerland
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Leuba G, Contant B, Saini K, Kraftsik R. [Involvement of the visual system in Alzheimer's disease]. Rev Med Suisse Romande 1995; 115:45-51. [PMID: 7846444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- G Leuba
- Institut d'anatomie, Université de Lausanne
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Levesque P, Ramchurren N, Saini K, Joyce A, Libertino J, Summerhayes IC. Screening of human bladder tumors and urine sediments for the presence of H-ras mutations. Int J Cancer 1993; 55:785-90. [PMID: 7902340 DOI: 10.1002/ijc.2910550516] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
A series of 111 human bladder tumors were screened using oligonucleotide mutant specific probes, restriction enzyme analysis and single-stranded confirmation polymorphism (SSCP) for the presence of H-ras activation events. Thirty-three tumors were found to harbor H-ras mutations where a glycine to valine (G-->T) change in codon 12 was the most common point mutation recorded (26 tumors). Additional mutations involved glycine to cysteine at codon 13 (2 tumors) and glutamine to arginine/lysine/leucine at codon 61 (3/1/1 tumors, respectively). Ambiguous signals recorded with oligonucleotide probes were further analyzed using SSCP analysis revealing the presence of H-ras mutations in restricted regions of some tumors. The apparent sensitivity of SSCP enabled us to extend this study to DNA isolated from urine sediments where 4 of the 9 patients studied showed representation of mutant H-ras. Our study demonstrates a sensitive, non-invasive assay for the screening of urine-borne cells, with no requirement for prior knowledge of the mutational change at the H-ras locus.
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Affiliation(s)
- P Levesque
- Department of Surgery, New England Deaconess Hospital, Harvard Medical School, Boston, MA 02215
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Singhal U, Mohsin S, Saini K, Singhal KC. Serum level of iron and transferrin in normal and anaemic pregnant women. Indian J Physiol Pharmacol 1993; 37:71-4. [PMID: 8449550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Serum levels of iron and transferrin, and percent saturation of total iron binding capacity (TIBC) and latent iron binding capacity were estimated in 89 women in their I, II and IIIrd trimester of pregnancy. Associated infective, metabolic or degenerative diseases were excluded after clinical examination. The women were divided into three groups of normal, mildly anaemic and severely anaemic. In the normal group serum iron levels were within normal range irrespective of period of gestation, whereas in the anaemic groups, these were lower. Serum transferrin levels were significantly low in II and III trimester of pregnancy of anaemic women. Percent saturation of TIBC was even lower than normal in Ist trimester of pregnancy in normal pregnancy (27.12%). However in mild anaemic there was significant fall and in severe anaemia, it was very low, leaving a vast latent iron binding capacity. The decrease of % saturation of TIBC even in normal pregnant women is indicative of inherent poor stores, which may be due to defective diet.
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Affiliation(s)
- U Singhal
- Department of Physiology, J.N. Medical College, Aligarh Muslim University
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Abstract
The effect of sodium butyrate on the expression of the carcinoembryonic-antigen (CEA) gene was studied in two poorly differentiated colorectal-carcinoma cell lines (Clone-A and MIP-101) and in one well-differentiated cell line (LS-174T); A.T.C.C. no. CCL 188). Northern-blot and dot-blot analyses indicated a steady increase in CEA mRNA from day 4 to a maximal level by day 14 after these cells were exposed to 2 mM-sodium butyrate. Studies using nuclear run-off assays followed by dot-blot hybridization to a partial CEA cDNA clone demonstrated that specific increases in gene transcription rates (3-fold in MIP-101, 4-fold in LS-174T and 6-fold in Clone-A) are not sufficient to account for the observed increases in CEA mRNA abundance. Further studies showed that CEA-specific transcripts have a half-life of about 60-80 min, and treatment with sodium butyrate increased the stability of CEA-specific transcripts to about 340 min in LS-174T cells and to about 500 min in Clone-A cells. We conclude that the induction of the CEA-gene expression by sodium butyrate in colorectal-cancer cells is mediated by both transcriptional and post-transcriptional mechanisms, with CEA mRNA stability as one of the major check-points.
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Affiliation(s)
- K Saini
- Department of Surgery, New England Deaconess Hospital, Harvard Medical School, Boston, MA 02115
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Abstract
In 3T3-L1 adipocytes, glutamine synthetase (GS; EC 6.3.1.2) is subject to regulation by dexamethasone, insulin and dibutyryl cyclic AMP (Bt2cAMP). Dexamethasone increases GS-mRNA content and GS-gene transcription, whereas insulin and Bt2cAMP prevent these increases. The effects of these modulators on the control of GS-mRNA stability were investigated. We report here that GS mRNA has a half-life of about 110 min. Bt2cAMP increases GS-mRNA degradation by greater than 2-fold (half-life 50 min), whereas insulin or dexamethasone have little effect on GS-mRNA stability. Down-regulation of GS-gene expression by Bt2cAMP will involve a co-ordinate response at the level of gene transcription and mRNA stability. However, the molecular mechanisms by which insulin and dexamethasone regulate GS-gene expression in cultured adipocytes remains to be elucidated.
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Affiliation(s)
- K Saini
- Laboratory of Cancer Biology, New England Deaconess Hospital, Harvard Medical School, Boston, MA 02115
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Saini K, Kretz R, Rager G. Classes of neurons in relation to the laminar organization of the lateral geniculate nucleus in the tree shrew, Tupaia belangeri. J Comp Neurol 1987; 259:31-49. [PMID: 3584555 DOI: 10.1002/cne.902590104] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
We used the rapid Golgi and horseradish peroxidase (HRP) techniques to study the dendritic spread of relay neurons in functionally distinct laminae of the tree shrew dorsal lateral geniculate nucleus (LGNd). On the basis of their dendritic spread in relation to laminar and interlaminar zones, we describe three classes of relay neurons. Unilaminar neurons with multipolar radiate, bitufted, and intermediate types of dendrites. Dendrites of these neurons are confined to one lamina only, but also can have some of their segments in adjacent interlaminar zones. Multilaminar neurons with multipolar radiate, bitufted, and intermediate types of dendrites. Independent of the site of their cell bodies in a laminar or interlaminar zone, these neurons spread their dendrites over two or more laminae. Interlaminar neurons whose cell bodies and dendrites are confined to a single interlaminar zone. Unilaminar neurons are found in all the laminae. In the medial three laminae, they are more of the radiate type, whereas in laminae 4 and 5 their dendrites tend to be more of a tufted nature. Lamina 6 shows a preponderance of the elongated bitufted type. Multilaminar neurons, although less common as compared to the unilaminar, are also observed in all the laminae. Some neurons have their dendrites confined to an interlaminar zone. By retrograde transport of HRP injected into the visual cortex, we have shown that these neurons are, in fact, relay neurons. In addition to relay neurons, there are small interneurons with "axoniform" dendrites and an unmyelinated axon whose arborization is confined within the limits of the neuron's dendritic spread. Neurons of this type are not labeled with HRP injected into the visual cortex. We conclude that although each lamina is functionally specialized by input from ipsilateral or contralateral retina and by segregation of neurons responding to on or off stimuli, some multilaminar neurons can be found in each lamina. Thus, laminar as well as interlaminar zones contain a class of neurons that could provide a cross-talk between the functionally specialized laminae. Most relay neurons in all the laminae, however, confine their dendrites to their home lamina. Thus, the dendritic architecture of relay neurons allows for processing of information both within channels and between channels.
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