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Popy NN, Hoque MN, Khan MFR, Biswas L, Rahman MH, Saiduzzaman M, Rahman M, Rahman MB. Draft genome sequencing of a multidrug-resistant Salmonella enterica subspecies enterica serovar Typhimurium strain isolated from chicken in Bangladesh. Microbiol Resour Announc 2024; 13:e0061923. [PMID: 38088574 DOI: 10.1128/mra.00619-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Accepted: 11/21/2023] [Indexed: 01/18/2024] Open
Abstract
Herein this study, we sequenced the genome of a multidrug-resistant Salmonella enterica serovar Typhimurium strain MBR-MFRK-23 isolated from the liver tissue of a diseased layer chicken. The 4,964,854-bp draft genome comprises 50 contigs with 50.5× coverage and 52.1% GC content and is typed as S. enterica sequence type 19.
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Affiliation(s)
- Najmun Nahar Popy
- Department of Microbiology and Hygiene, Bangladesh Agricultural University , Mymensingh, Bangladesh
| | - M Nazmul Hoque
- Molecular Biology and Bioinformatics Laboratory, Department of Gynecology, Obstetrics and Reproductive Health, Bangabandhu Sheikh Mujibur Rahman Agricultural University (BSMRAU) , Gazipur, Bangladesh
| | | | - Limon Biswas
- Department of Microbiology and Hygiene, Bangladesh Agricultural University , Mymensingh, Bangladesh
| | - Mohammad Habibur Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University , Mymensingh, Bangladesh
| | - Md Saiduzzaman
- Department of Neurology, Mymensingh Medical College Hospital , Mymensingh, Bangladesh
| | - Marzia Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University , Mymensingh, Bangladesh
| | - Md Bahanur Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University , Mymensingh, Bangladesh
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Rahman MH, Al Azad S, Uddin MF, Farzana M, Sharmeen IA, Kabbo KS, Jabin A, Rahman A, Jamil F, Srishti SA, Riya FH, Khan T, Ahmed R, Nurunnahar, Rahman S, Khan MFR, Rahman MB. WGS-based screening of the co-chaperone protein DjlA-induced curved DNA binding protein A (CbpA) from a new multidrug-resistant zoonotic mastitis-causing Klebsiella pneumoniae strain: a novel molecular target of selective flavonoids. Mol Divers 2023:10.1007/s11030-023-10731-6. [PMID: 37902899 DOI: 10.1007/s11030-023-10731-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Accepted: 09/11/2023] [Indexed: 11/01/2023]
Abstract
The research aimed to establish a multidrug-resistant Klebsiella pneumoniae-induced genetic model for mastitis considering the alternative mechanisms of the DjlA-mediated CbpA protein regulation. The Whole Genome Sequencing of the newly isolated K. pneumoniae strain was conducted to annotate the frequently occurring antibiotic resistance and virulence factors following PCR and MALDI-TOF mass-spectrophotometry. Co-chaperon DjlA was identified and extracted via restriction digestion on PAGE. Based on the molecular string property analysis of different DnaJ and DnaK type genes, CbpA was identified to be regulated most by the DjlA protein during mastitis. Based on the quantum tunnel-cluster profiles, CbpA was modeled as a novel target for diversified biosynthetic, and chemosynthetic compounds. Pharmacokinetic and pharmacodynamic analyses were conducted to determine the maximal point-specificity of selective flavonoids in complexing with the CbpA macromolecule at molecular docking. The molecular dynamic simulation (100 ns) of each of the flavonoid-protein complexes was studied regarding the parameters RMSD, RMSF, Rg, SASA, MMGBSA, and intramolecular hydrogen bonds; where all of them resulted significantly. To ratify all the molecular dynamic simulation outputs, the potential stability of the flavonoids in complexing with CbpA can be remarked as Quercetin > Biochanin A > Kaempherol > Myricetin, which were all significant in comparison to the control Galangin. Finally, a comprehensive drug-gene interaction pathway for each of the flavonoids was developed to determine the simultaneous and quantitative-synergistic effects of different operons belonging to the DnaJ-type proteins on the metabolism of the tested pharmacophores in CbpA. Considering all the in vitro and in silico parameters, DjlA-mediated CbpA can be a novel target for the tested flavonoids as the potential therapeutics of mastitis as futuristic drugs.
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Affiliation(s)
- Mohammad Habibur Rahman
- Molecular Microbiology and Vaccinology Lab, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Salauddin Al Azad
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 214122, Jiangsu, People's Republic of China
- Immunoinformatics and Vaccinomics Research Unit, RPG Interface Lab, Jashore, 7400, Bangladesh
| | - Mohammad Fahim Uddin
- College of Material Science and Engineering, Zhejiang Sci-Tech University, Hangzhou, 310018, Zhejiang, People's Republic of China
- Immunoinformatics and Vaccinomics Research Unit, RPG Interface Lab, Jashore, 7400, Bangladesh
| | - Maisha Farzana
- School of Medicine, Dentistry and Nursing, University of Glasgow, University Avenue, Glasgow, G12 8QQ, UK
| | - Iffat Ara Sharmeen
- Department of Mathematics & Natural Sciences, School of Data Sciences, BRAC University, Dhaka, 1212, Bangladesh
| | - Kaifi Sultana Kabbo
- Department of Biochemistry and Microbiology, North South University, Dhaka, 1229, Bangladesh
| | - Anika Jabin
- Department of Biochemistry and Microbiology, North South University, Dhaka, 1229, Bangladesh
- Immunoinformatics and Vaccinomics Research Unit, RPG Interface Lab, Jashore, 7400, Bangladesh
| | - Ashfaque Rahman
- Department of Biochemistry and Microbiology, North South University, Dhaka, 1229, Bangladesh
- Immunoinformatics and Vaccinomics Research Unit, RPG Interface Lab, Jashore, 7400, Bangladesh
| | - Farhan Jamil
- Department of Pharmacy, University of Asia Pacific, Farmgate, Dhaka, 1205, Bangladesh
| | | | - Fahmida Haque Riya
- School of Pharmacy, BRAC University, 66 Mohakhali, Dhaka, 1212, Bangladesh
| | - Towhid Khan
- Department of Medicine, Comilla Medical College, Kuchaitoli, Comilla, 3500, Bangladesh
| | - Rasel Ahmed
- School of Computing, Engineering and Digital Technologies, Teesside University, Middlesbrough, TS1 3BX, UK
| | - Nurunnahar
- Department of Mathematics, Mawlana Bhashani Science and Technology University, Tangail, 1902, Bangladesh
| | - Samiur Rahman
- Department of Biochemistry and Microbiology, North South University, Dhaka, 1229, Bangladesh
- Immunoinformatics and Vaccinomics Research Unit, RPG Interface Lab, Jashore, 7400, Bangladesh
| | - Mohammad Ferdousur Rahman Khan
- Molecular Microbiology and Vaccinology Lab, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Md Bahanur Rahman
- Molecular Microbiology and Vaccinology Lab, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh.
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Rahman MH, El Zowalaty ME, Falgenhauer L, Khan MFR, Alam J, Popy NN, Rahman MB. Draft Genome Sequences of Two Clinical Mastitis-Associated Escherichia coli Strains, of Sequence Type 101 and Novel Sequence Type 13054, Isolated from Dairy Cows in Bangladesh. Microbiol Resour Announc 2023; 12:e0016623. [PMID: 37428031 PMCID: PMC10443403 DOI: 10.1128/mra.00166-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Accepted: 05/13/2023] [Indexed: 07/11/2023] Open
Abstract
Here, we report the draft genome sequences of two Escherichia coli strains that were isolated from raw milk samples obtained from lactating cows with mastitis in Bangladesh. One strain was assigned to a novel sequence type 13054, and the other strain belonged to sequence type 101.
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Affiliation(s)
- Mohammad H. Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Mohamed E. El Zowalaty
- Veterinary Medicine and Food Security Research Group, Medical Laboratory Sciences Program, Faculty of Health Sciences, Abu Dhabi Women's Campus, Higher Colleges of Technology, Abu Dhabi, United Arab Emirates
| | - Linda Falgenhauer
- German Center for Infection Research, Site Giessen-Marburg-Langen, Giessen, Germany
- Institute of Hygiene and Environmental Medicine, Justus Liebig University Giessen, Giessen, Germany
- Hessian University Competence Center for Hospital Hygiene, Justus Liebig University Giessen, Giessen, Germany
| | | | - Jahangir Alam
- National Institute of Biotechnology, Savar, Dhaka, Bangladesh
| | - Najmun Nahar Popy
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - M. Bahanur Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
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Ievy S, Hoque MN, Islam MS, Sobur MA, Ballah FM, Rahman MS, Rahman MB, Hassan J, Khan MFR, Rahman MT. Genomic characteristics, virulence and antimicrobial resistance in avian pathogenic Escherichia coli MTR_BAU02 strain isolated from layer farms in Bangladesh. J Glob Antimicrob Resist 2022; 30:155-162. [PMID: 35671989 DOI: 10.1016/j.jgar.2022.06.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 05/29/2022] [Accepted: 06/01/2022] [Indexed: 11/28/2022] Open
Abstract
BACKGROUND Colibacillosis, caused by avian pathogenic Escherichia coli (APEC), is one of the most significant infectious diseases affecting poultry worldwide. OBJECTIVE This study was aimed to determine the genomic diversity, virulence factor genes (VFGs) and antimicrobial resistance genes (ARGs) in the APEC MTR_BAU02 strain isolated from layer chickens using whole-genome sequencing (WGS). METHOD Paired-end (2 × 250) WGS was performed using Illumina MiSeq sequencer and de novo assembly was performed using SPAdes. Core genome MLST (cgMLST) analysis between APEC MTR_BAU02 and all of the ST1196 E. coli strains retrieved from the NCBI GenBank database was performed using BacWGSTdb 2.0 server. We further utilized different databases to detect ARGs, VFGs and genomic functional features of the APEC MTR_BAU02 strain. RESULTS The complete genome of APEC MTR_BAU02 consists of 94 contigs comprising 4,924,680 bp (51.1% GC content) including 4,681 protein-coding sequences, one chromosome, one plasmid, and was assigned to ST1196. The closest relatives of APEC MTR_BAU02 were another four isolates originating from human clinical (diarrhoeic stool) specimens in Bangladesh and two clinical isolates originating from chicken in India, which differed by 694 cgMLST alleles. One hundred twenty-two ARGs and 92 VFGs were identified in APEC MTR_BAU02 genome. Metabolic functional annotations detected 380 SEED subsystems including genes coding for carbohydrate metabolism, protein metabolism, cofactors, vitamins, prosthetic groups and pigments, respiration, membrane transport, stress response, motility and chemotaxis, and virulence, disease and defense. CONCLUSION This study reports the genome sequence of a multidrug resistant APEC strain isolated from layer birds in Bangladesh. The ARGs and VFGs, widespread in APEC MTR_BAU02, are similar to those found in human isolates, and highlight the growing threat of antimicrobial resistance in both poultry and humans.
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Affiliation(s)
- Samina Ievy
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - M Nazmul Hoque
- Department of Gynaecology, Obstetrics and Reproductive Health, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Md Saiful Islam
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Md Abdus Sobur
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Fatimah Muhammad Ballah
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - M Shaminur Rahman
- Department of Microbiology, Jashore University of Science and Technology, Jashore, 7408, Bangladesh
| | - Md Bahanur Rahman
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Jayedul Hassan
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Mohammad Ferdousur Rahman Khan
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh
| | - Md Tanvir Rahman
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, 2202, Bangladesh.
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Islam MN, Khan MK, Khan MFR, Kostoulas P, Rahman AKMA, Alam MM. Risk factors and true prevalence of bovine tuberculosis in Bangladesh. PLoS One 2021; 16:e0247838. [PMID: 33635911 PMCID: PMC7909650 DOI: 10.1371/journal.pone.0247838] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Accepted: 02/12/2021] [Indexed: 11/25/2022] Open
Abstract
Bovine tuberculosis (bTb) is endemic in Bangladesh but the true prevalence has not yet been reported. Our objectives for this study were to determine the true prevalence and identify risk factors for bTb at the animal- and herd-level in Bangladesh. A total of 510 cows were randomly selected during January 2018 to December 2018. Caudal fold (CFT) and comparative cervical tuberculin tests (CCT) were serially interpreted. Animal- and herd-level risk factor data were collected using a pre-tested questionnaire. The hierarchical true prevalence of bTb was estimated within a Bayesian framework. The herd- and animal-level risk factors were identified using mixed effects logistic regression. The apparent prevalence of bTb was 20.6% [95% Confidence Interval (CI): 17.3; 24.3] based on CFT. The animal-level true prevalence of bTb was 21.9 (13.0; 32.4). The herd-level true prevalence in different regions varied from 41.9% to 88.8%. The region-level true prevalence was 49.9 (13.8; 91.2). There is a 100% certainty that herds from Bhaluka and Mymensingh Sadar upazilas are not free from bTb. The odds of bTb were 3.9 times (1.2; 12.6) higher in herds having more than four cows than those with ≤ 4 cows. On the other hand, the risk of bTb was 3.3 times higher (1.0; 10.5) in non-grazing cows than grazing cows. Crossbred cows were 2.9 times (1.5; 5.9) more likely to be infected with bTb than indigenous cows. The risk of bTb in animals with cough was 2.3 times (1.2; 4.3) higher than those without cough. Crossbred, non-grazing cows with cough should be targeted for bTb surveillance. Herds of the Mymensingh, Sadar and Bhaluka regions should be emphasized for bTb control programs. Estimation of Bayesian hierarchical true prevalence facilitates identification of areas with higher prevalence and can be used to indicate regions that where true prevalence exceeds a pre-specified critical threshold.
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Affiliation(s)
- Md. Nazimul Islam
- Faculty of Veterinary Science, Department of Medicine, Bangladesh Agricultural University, Mymensingh, Bangladesh
- Department of Livestock Services, Dhaka, Bangladesh
| | - Mohammad Kamruzzaman Khan
- Faculty of Veterinary Science, Department of Medicine, Bangladesh Agricultural University, Mymensingh, Bangladesh
- Department of Community Medicine, Mymensingh Medical College, Mymensingh, Bangladesh
| | - Mohammad Ferdousur Rahman Khan
- Faculty of Veterinary Science, Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Polychronis Kostoulas
- Faculty of Public Health and One Health, Laboratory of Epidemiology & Artificial Intelligence, School of Health Sciences, University of Thessaly, Volos, Greece
| | - A. K. M. Anisur Rahman
- Faculty of Veterinary Science, Department of Medicine, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Md. Mahbub Alam
- Faculty of Veterinary Science, Department of Medicine, Bangladesh Agricultural University, Mymensingh, Bangladesh
- * E-mail:
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Hossen ML, Ahmed S, Khan MFR, Nazmul Hussain Nazir KHM, Saha S, Islam MA, Rahman MT, Sayem SM, Rahman MB. The emergence of foot-and-mouth disease virus serotype O PanAsia-02 sub-lineage of Middle East-South Asian topotype in Bangladesh. J Adv Vet Anim Res 2020; 7:360-366. [PMID: 32607369 PMCID: PMC7320810 DOI: 10.5455/javar.2020.g429] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2020] [Revised: 05/02/2020] [Accepted: 05/04/2020] [Indexed: 11/15/2022] Open
Abstract
OBJECTIVE This research work was conducted for the molecular characterization of the circulating foot-and-mouth disease (FMD) virus in Bangladesh and revealed out their serotype. MATERIALS AND METHODS The VP1 gene of six field isolates of FMD virus (FMDV) serotypes (two serotypes O, two serotypes A, and two serotypes Asia 1) was subjected for sequencing and phylogenetic analysis. Neighbor-joining trees were constructed by using the Molecular Evolutionary Genetics Analysis 6, having the field nucleotide sequences of FMDV and related sequences available in the GenBank. RESULTS The nucleotide sequences of the VP1 genes of serotypes O, A, and Asia-1 of the isolates revealed that overall isolates were 91%-100% similar to the isolates reported from Bangladesh and other neighboring countries. Among the isolates reported from Bangladesh, serotype O had 98%-100% identity, serotype A had 91%-100% identity, and serotype Asia-1 had 94%-100% identity. A phylogenetic analysis revealed that the FMDV serotype O PanAsia-02 sub-lineage was confirmed in Bangladesh under the Middle East-South Asian (ME-SA) topotype. On the other hand, we identified genotype VII (18) of Asia topotype (serotype A) and lineage C (serotype Asia-1). CONCLUSION The FMDV serotype O PanAsia-02 sub-lineage was confirmed in Bangladesh under the ME-SA topotype for the first time. The extensive cross-border animal movement from neighboring countries may act as the source of diversified FMDV serotypes in Bangladesh.
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Affiliation(s)
- Md. Liakot Hossen
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
- Sirajganj Government Veterinary College, Belkuchi, Sirajganj, Bangladesh
| | - Sultan Ahmed
- Department of Microbiology and Immunology, Sylhet Agricultural University, Sylhet, Bangladesh
| | - Mohammad Ferdousur Rahman Khan
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - K. H. M. Nazmul Hussain Nazir
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - Sukumar Saha
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - Md. Ariful Islam
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - Md. Tanvir Rahman
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - Sheikh Mohammad Sayem
- Department of Agricultural Statistics, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
| | - Md. Bahanur Rahman
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh
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Lai X, Qi A, Liu Y, Mendoza LEDR, Liu Z, Lin Z, Khan MFR. Evaluating Inoculation Methods to Infect Sugar Beet with Fusarium oxysporum f. betae and F. secorum. Plant Dis 2020; 104:1312-1317. [PMID: 32181721 DOI: 10.1094/pdis-09-19-1895-re] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Minnesota and North Dakota combined contain 55% of the sugar beet production area in the United States, contributing to 49% of the nation's sugar beet production in 2018. Fusarium diseases caused by Fusarium oxysporum f. betae and F. secorum on sugar beet can cause significant reduction in both root yield and sucrose concentration and purity. The objective of this research was to identify an alternative artificial inoculation method to induce Fusarium diseases on sugar beet leaves and roots caused by both Fusarium spp. in greenhouse conditions to better aid in research efforts. We tested four inoculation methods, including barley to seed, barley to root, drenching, and cutting. and compared them with the conventional root-dipping inoculation method. The inoculation method of placing Fusarium-colonized barley seed close to sugar beet seed (barley to seed) caused levels of symptom severities on both leaves and roots similar to the root-dipping method. Because the traditional root-dipping method involves a laborious transplant process, use of infected barley seed as inoculum may serve as an alternative method in the evaluation of host resistance and pathogen virulence among Fusarium diseases by Fusarium spp. on sugar beet at the seed or seedling stage.
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Affiliation(s)
- X Lai
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58108-6050, U.S.A
| | - A Qi
- School of Life and Medical Sciences, University of Hertfordshire, Hatfield, AL10 9AB, U.K
| | - Y Liu
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58108-6050, U.S.A
| | - L E Del Río Mendoza
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58108-6050, U.S.A
| | - Z Liu
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58108-6050, U.S.A
| | - Z Lin
- Department of Agricultural and Biosystems Engineering, North Dakota State University, Fargo, ND 58108-6050, U.S.A
| | - M F R Khan
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58108-6050, U.S.A
- University of Minnesota, St. Paul, MN, U.S.A
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Ansari WK, Parvej MS, El Zowalaty ME, Jackson S, Bustin SA, Ibrahim AK, El Zowalaty AE, Rahman MT, Zhang H, Khan MFR, Ahamed MM, Rahman MF, Rahman M, Nazir KHMNH, Ahmed S, Hossen ML, Kafi MA, Yamage M, Debnath NC, Ahmed G, Ashour HM, Masudur Rahman M, Noreddin A, Rahman MB. Surveillance, epidemiological, and virological detection of highly pathogenic H5N1 avian influenza viruses in duck and poultry from Bangladesh. Vet Microbiol 2016; 193:49-59. [PMID: 27599930 DOI: 10.1016/j.vetmic.2016.07.025] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2016] [Accepted: 07/31/2016] [Indexed: 12/09/2022]
Abstract
Avian influenza viruses (AIVs) continue to pose a global threat. Waterfowl are the main reservoir and are responsible for the spillover of AIVs to other hosts. This study was conducted as part of routine surveillance activities in Bangladesh and it reports on the serological and molecular detection of H5N1 AIV subtype. A total of 2169 cloacal and 2191 oropharyngeal swabs as well as 1725 sera samples were collected from live birds including duck and chicken in different locations in Bangladesh between the years of 2013 and 2014. Samples were tested using virus isolation, serological tests and molecular methods of RT-PCR. Influenza A viruses were detected using reverse transcription PCR targeting the virus matrix (M) gene in 41/4360 (0.94%) samples including both cloacal and oropharyngeal swab samples, 31 of which were subtyped as H5N1 using subtype-specific primers. Twenty-one live H5N1 virus isolates were recovered from those 31 samples. Screening of 1,868 blood samples collected from the same birds using H5-specific ELISA identified 545/1603 (34%) positive samples. Disconcertingly, an analysis of 221 serum samples collected from vaccinated layer chicken in four districts revealed that only 18 samples (8.1%) were seropositive for anti H5 antibodies, compared to unvaccinated birds (n=105), where 8 samples (7.6%) were seropositive. Our result indicates that the vaccination program as currently implemented should be reviewed and updated. In addition, surveillance programs are crucial for monitoring the efficacy of the current poultry vaccinations programs, and to monitor the circulating AIV strains and emergence of AIV subtypes in Bangladesh.
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Affiliation(s)
- Wahedul Karim Ansari
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Md Shafiullah Parvej
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Mohamed E El Zowalaty
- School of Health Sciences, KwaZulu Natal University, Durban 4000, South Africa; Department of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia, 30322, USA.
| | - Sally Jackson
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Stephen A Bustin
- Postgraduate Medical Institute, Anglia Ruskin University, Chelmsford, UK
| | - Adel K Ibrahim
- Department of Clinical Pathology, Faculty of Veterinary Medicine, Cairo University, Egypt
| | - Ahmed E El Zowalaty
- Department of Physiology & Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, Georgia 30602, USA
| | - Md Tanvir Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Han Zhang
- Department of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia, 30322, USA
| | | | - Md Mostakin Ahamed
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | | | - Marzia Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | | | - Sultan Ahmed
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Md Liakot Hossen
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Md Abdul Kafi
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Mat Yamage
- Emergency Center for Transboundary Animal Diseases (ECTAD), Food and Agriculture Organization (FAO) of the United Nations, Bangladesh
| | - Nitish C Debnath
- Emergency Center for Transboundary Animal Diseases (ECTAD), Food and Agriculture Organization (FAO) of the United Nations, Bangladesh
| | - Graba Ahmed
- Emergency Center for Transboundary Animal Diseases (ECTAD), Food and Agriculture Organization (FAO) of the United Nations, Bangladesh
| | - Hossam M Ashour
- Department of Biological Sciences, College of Arts and Sciences, University of South Florida St. Petersburg, Florida, USA; Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Egypt
| | - Md Masudur Rahman
- Department of Pathology, Faculty of Veterinary and Animal Science, Sylhet Agricultural University, Sylhet, Bangladesh
| | - Ayman Noreddin
- School of Pharmacy, Chapman University, Irvine, California, 92618, USA
| | - Md Bahanur Rahman
- Department of Microbiology and Hygiene, Bangladesh Agricultural University, Mymensingh, Bangladesh.
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Parvej MS, Nazir KHMNH, Rahman MB, Jahan M, Khan MFR, Rahman M. Prevalence and characterization of multi-drug resistant Salmonella Enterica serovar Gallinarum biovar Pullorum and Gallinarum from chicken. Vet World 2016; 9:65-70. [PMID: 27051187 PMCID: PMC4819353 DOI: 10.14202/vetworld.2016.65-70] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2015] [Revised: 12/07/2015] [Accepted: 12/12/2015] [Indexed: 11/16/2022] Open
Abstract
AIM Salmonella is an important zoonotic pathogen responsible for animal and human diseases. The aim of the present study was to determine the prevalence and stereotyping of Salmonella isolates isolated from apparently healthy poultry. Furthermore, the clonal relatedness among the isolated Salmonella serovars was assessed. MATERIALS AND METHODS A total of 150 cloacal swab samples from apparently healthy chickens were collected, and were subjected for the isolation and identification of associated Salmonella organisms. The isolated colonies were identified and characterized on the basis of morphology, cultural characters, biochemical tests, slide agglutination test, polymerase chain reaction, and pulsed-field gel electrophoresis (PFGE). Antibiotic sensitivity patterns were also investigated using commonly used antibiotics. RESULTS Of the 150 samples, 11 (7.33%) produced characteristics pink colony with black center on XLD agar medium, and all were culturally and biochemically confirmed to be Salmonella. All possessed serovar-specific gene SpeF and reacted uniformly with group D antisera, suggesting that all of the isolates were Salmonella Enterica serovar Gallinarum, biovar Pullorum and/or Gallinarum. Antimicrobial susceptibility testing revealed that 54.54% of the isolated Salmonella Enterica serovars were highly sensitive to ciprofloxacin, whereas the 81.81% isolates were resistant to amoxycillin, doxycycline, kanamycin, gentamycin, and tetracycline. Pulsed-field gel electrophoresis of the XbaI-digested genomic DNA exhibited identical banding patterns, suggesting that the multidrug resistant Salmonella Enterica serovars occurring in commercial layers are highly clonal in Bangladesh. CONCLUSION The present study was conducted to find out the prevalence of poultry Salmonella in layer chicken and to find out the clonal relationship among them. The data in this study suggest the prevalence of Salmonella Enterica, which is multidrug resistant and highly clonal for commercial layers of Bangladesh.
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Affiliation(s)
- Md. Shafiullah Parvej
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
| | - K. H. M. Nazmul Hussain Nazir
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
| | - M. Bahanur Rahman
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
| | - Mueena Jahan
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
| | - Mohammad Ferdousur Rahman Khan
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
| | - Marzia Rahman
- Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh-2202, Bangladesh
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Rahaman MT, Rahman M, Rahman MB, Khan MFR, Hossen ML, Parvej MS, Ahmed S. Poultry Salmonella Specific Bacteriophage Isolation and Characterization. ACTA ACUST UNITED AC 2014. [DOI: 10.3329/bjvm.v12i2.21264] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Bacteriophage named as SAL-PG (Salmonella bacteriophage), specific to Salmonella pullorum and Salmonella gallinarum was isolated by an enrichment method directly from waste water near to poultry farm. For the isolation of phage 4.5 ml water sample, 0.5 ml of 10X Nutrient Broth and 0.5 ml of log phage bacteria were mixed well and incubated at 37° C for overnight followed by centrifugation at 10,000 rpm for 10 minutes. The presence of bacteriophage was observed by spot test over the bacterial lawn of and plaque assay. The host range of the isolated bacteriophage was determined by spot test using 12 different bacterial isolates. The phages were found to infect Salmonella pullorum, Salmonella gallinarum and Salmonella typhimurium and produced clear plaque on these Salmonella serovars. The bacteriophage was able to survive in wide range of pH between 2 to 9 and resistant at 60° C for 1 hour. More than 50% phages were readily adsorbed to the host bacteria. The restriction enzyme analysis showed that the phage DNA possess restriction site for Taq?I, HindIII and BstYI; but no restriction site for XhoI and BstEII as these two enzymes failed to digest the phage DNA. The characterizations of the bacteriophage would be helpful in establishing a basis for adopting the application of the most effective bacteriophage treatment to control these poultry bacteria.DOI: http://dx.doi.org/10.3329/bjvm.v12i2.21264 Bangl. J. Vet. Med. (2014). 12 (2): 107-114
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Hossain ML, Khan MFR, Nazir KHMNH, Rahman MB. A Cross Sectional Study on Prevalence of Bovine Tuberculosis of Buffaloes in Bangladesh. ACTA ACUST UNITED AC 2013. [DOI: 10.3329/mh.v1i1.13709] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
This study was conducted to determine the prevalence of bovine tuberculosis in buffalo population in Bangladesh by Caudal Fold Tuberculin (CFT) test using bPPD and also by Comparative Cervical Tuberculin (CCT) test using both bPPD and aPPD. The percentage of reactors was 6.12% in CFT, whereas the percentage of positive buffaloes was 4.08% by CCT method. The percentage of suspicious buffaloes was 10.20% by CFT. On the other hand, all the suspicious cases were proved as misleading-false-reactions in CCT. By CCT method, the male buffaloes (6.25%) showed more positivity to tuberculosis than the female buffaloes (3.03%) of the same area. In contrast, the result found by CFT method was more or less similar (20%) for both male and female buffaloes. Young buffaloes (6-30 months) were more susceptible to tuber-culosis than older buffaloes. It might be suggested that a well coordination in activities should be taken among the public health and Veterinary public health organelles for complete eradication of the disease from the country.DOI: http://dx.doi.org/10.3329/mh.v1i1.13709 Microbes and Health Vol.1(1) June 2012 pp.23-26
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Secor GA, Rivera VV, Khan MFR, Gudmestad NC. Monitoring Fungicide Sensitivity of Cercospora beticola of Sugar Beet for Disease Management Decisions. Plant Dis 2010; 94:1272-1282. [PMID: 30743643 DOI: 10.1094/pdis-07-09-0471] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Cercospora leaf spot, caused by the fungus Cercospora beticola Sacc., is the most serious and important foliar disease of sugar beet (Beta vulgaris L.) wherever it is grown worldwide. Cercospora leaf spot first caused economic damage in North Dakota and Minnesota in 1980, and the disease is now endemic. This is the largest production area for sugar beet in the United States, producing 5.5 to 6.0 million metric tons on approximately 300,000 ha, which is 56% of the sugar beet production in the United States. This Plant Disease feature article details a cooperative effort among the participants in the sugar beet industry in this growing area and represents a successful collaboration and team effort to confront and change a fungicide resistance crisis to a fungicide success program. As a case study of success for managing fungicide resistance, it will serve as an example to other pathogen-fungicide systems and provide inspiration and ideas for long-term disease management by fungicides.
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Affiliation(s)
| | | | - M F R Khan
- North Dakota State University/University of Minnesota
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13
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Khan J, Qi A, Khan MFR. Fluctuations in number of Cercospora beticola conidia in relationship to environment and disease severity in sugar beet. Phytopathology 2009; 99:796-801. [PMID: 19522577 DOI: 10.1094/phyto-99-7-0796] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Cercospora leaf spot, caused by Cercospora beticola, is the most damaging foliar disease of sugar beet in Minnesota (MN) and North Dakota (ND). Research was conducted to characterize the temporal progression of aerial concentration of C. beticola conidia in association with the environment and disease severity in sugar beet. In 2003 and 2004, volumetric spore traps were placed within inoculated sugar beet plots to determine daily dispersal of conidia at Breckenridge, MN, and St. Thomas, ND. Plots were rated weekly for disease severity. At both locations, conidia were first collected in early July 2003 and late June in 2004. Peaks of conidia per cubic meter of air were observed with maxima in late August 2003 and in early September 2004 at both locations. Peaks of airborne conidium concentration were significantly correlated with the average temperature of daily hours when relative humidity was greater than 87%. Weekly mean hourly conidia per cubic meter of air was significantly (P < 0.01) associated with disease severity during both years and across locations. This study showed that C. beticola conidial numbers may be used to estimate potential disease severity that, with further research, could be incorporated in a disease forecasting model to rationalize Cercospora leaf spot management.
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Affiliation(s)
- J Khan
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58105, USA
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Khan J, Rio LED, Nelson R, Rivera-Varas V, Secor GA, Khan MFR. Survival, Dispersal, and Primary Infection Site for Cercospora beticola in Sugar Beet. Plant Dis 2008; 92:741-745. [PMID: 30769593 DOI: 10.1094/pdis-92-5-0741] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Cercospora beticola survives as stromata in infected crop residue. Spores produced on these survival structures serve as primary inoculum during the next cropping season. This study was conducted to determine how long C. beticola can survive at different soil depths, the mechanism of inoculum dispersal, and the primary infection site in sugar beet. Longevity of C. beticola was studied over a 3-year period under field conditions at Fargo, ND. C. beticola-infected leaves were placed at depths of 0, 10, and 20 cm and retrieved after 10, 22, and 34 months. Survival of C. beticola inoculum declined with time and soil depth. Inoculum left on the soil surface, 0 cm in depth, survived the longest (22 months) compared with that buried at 10 cm (10 months) and 20 cm (10 months). C. beticola dispersal from the primary source of inoculum was studied in the field for three growing seasons. Sugar beet plants were surrounded with plastic cages with and without ground cover, or exposed with and without ground cover. Significantly higher disease severity was observed on exposed plants than caged plants with or without ground cover, suggesting that wind was the major dispersal factor for C. beticola inoculum. The primary infection site by C. beticola was determined in a greenhouse study. Leaves, roots, and stems of healthy sugar beet plants were inoculated with C. beticola. Cercospora leaf spot symptoms were observed only on plants that were leaf inoculated, suggesting that the leaf was the primary infection site for C. beticola.
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Affiliation(s)
- J Khan
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - L E Del Rio
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - R Nelson
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - V Rivera-Varas
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - G A Secor
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - M F R Khan
- North Dakota State University and University of Minnesota
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Khan J, Del Río LE, Nelson R, Khan MFR. Improving the Cercospora Leaf Spot Management Model for Sugar Beet in Minnesota and North Dakota. Plant Dis 2007; 91:1105-1108. [PMID: 30780649 DOI: 10.1094/pdis-91-9-1105] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Management of Cercospora leaf spot, caused by Cercospora beticola, is necessary for the economic production of sugar beet (Beta vulgaris). The objectives of this study were to evaluate the impact of two relative humidity thresholds (87 and 90%) on the daily infection values (DIVs) used to determine when fungicide applications were required, to determine whether current Cercospora management recommendations for northern areas of Minnesota and North Dakota could be used by growers in the southern areas of these states, and to compare the utility of calendar-based fungicide applications with the Cercospora management model. Research was conducted in Breckenridge, MN and St. Thomas, ND in 2003 and 2004. Fungicide applications significantly (P = 0.05) reduced maximum disease severity (ymax) and area under the disease progress curve (AUDPC) when compared with the nontreated control at both locations during 2003 and 2004. Fungicides applied according to DIVs calculated at RH ≥ 87% or RH > 90% gave similar results. The mandatory second fungicide application 14 days after the first application for southern areas did not significantly decrease disease severity or AUDPC, or improve root yield or recoverable sucrose compared with treatments without the mandatory application. This research illustrates that a DIV calculated at RH ≥ 87% would result in similar timing of fungicide applications compared with DIVs calculated at RH > 90%. The results further show that the recommendation of fungicide applications at initial symptom and subsequent applications based on DIV and disease severity should be used for both northern and southern growers. Finally, this research showed that fungicide applications based on the Cercospora management model provided similar, effective disease control with fewer fungicide applications compared with calendar-based applications.
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Affiliation(s)
- J Khan
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - L E Del Río
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - R Nelson
- Department of Plant Pathology, North Dakota State University, Fargo 58105
| | - M F R Khan
- North Dakota State University and University of Minnesota
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Bradley CA, Burlakoti P, Nelson RS, Khan MFR. First Report of the Perfect Stage of Powdery Mildew of Sugar Beet in North Dakota Caused by Erysiphe polygoni. Plant Dis 2007; 91:470. [PMID: 30781224 DOI: 10.1094/pdis-91-4-0470b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Powdery mildew caused by Erysiphe polygoni was widespread on sugar beet (Beta vulgaris) in North Dakota during 2006. This disease is generally not prevalent in the state because of the application of fungicides, which also have efficacy against powdery mildew, for control of Cercospora leaf spot caused by Cercospora beticola. Because Cercospora leaf spot pressure was low in 2006, fewer fungicide applications were made in the state, thus allowing for more observations of powdery mildew. Leaf samples from four fields near Amenia, Minto, Prosper, and St. Thomas, ND were collected in mid-September to look for the perfect stage of E. polygoni, since this has recently been observed in Idaho, Colorado, Montana, and Nebraska (1-3). Only the leaves collected from the field near Amenia had visible immature (yellow and brown) globose ascomata; ascomata were not observed on the leaves collected in the other fields. Additional leaves were collected from the field near Amenia in early October; these leaves had immature and mature (black) globose ascomata that were 70 to 105 μm in diameter. Mature ascomata contained ovoid to elliptic asci with one to four hyaline-to-golden pigmented ascospores (20 to 25 × 12 to 20 μm). The color, shape, and size of ascomata, asci, and ascospores were similar to previously reported observations (1-4). The prevalence of the perfect stage in North Dakota is unknown, since no statewide surveys were conducted. To our knowledge, this is the first report of the perfect stage of E. polygoni on sugar beet in North Dakota. The occurrence of the perfect stage could lead to a means for overwintering in this area. Because of the means for genetic recombination, the risk of fungicide resistance and the development of races may increase. References: (1) J. J. Gallian and L. E. Hanson. Plant Dis. 87:200, 2003. (2) R. M. Harveson. Plant Dis. 88:1049, 2004. (3) B. Jacobsen et al. Plant Dis. 89:1362, 2005. (4) E. G. Ruppel. Powdery mildew. Pages 13-15 in: Compendium of Beet Diseases and Insects. E. D. Whitney and J. E. Duffus, eds. The American Phytopathological Society. St. Paul, MN, 1986.
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Affiliation(s)
- C A Bradley
- Department of Plant Pathology, North Dakota State University, 306 Walster Hall, Fargo 58105
| | - P Burlakoti
- Department of Plant Pathology, North Dakota State University, 306 Walster Hall, Fargo 58105
| | - R S Nelson
- Department of Plant Pathology, North Dakota State University, 306 Walster Hall, Fargo 58105
| | - M F R Khan
- Department of Plant Pathology, North Dakota State University, 306 Walster Hall, Fargo 58105
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Windels CE, Brantner JR, Bradley CA, Khan MFR. First Report of Fusarium oxysporum Causing Yellows on Sugar Beet in the Red River Valley of Minnesota and North Dakota. Plant Dis 2005; 89:341. [PMID: 30795369 DOI: 10.1094/pd-89-0341b] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
In 2002, somel sugar beet (Beta vulgaris L.) fields in the Red River Valley (RRV) of Minnesota and North Dakota had symptoms characteristic of Fusarium yellows (4). In 2004, ≈5% of fields in the RRV had symptomatic plants. Interveinal yellowing of older leaves typically began in mid-July and as the disease progressed, younger leaves turned yellow. Sometimes, one side of the leaf was yellow or necrotic while the other side remained green. As leaves died, they remained attached to the crown. Transverse sections of roots revealed a light gray-brown discoloration of the vascular tissue but no external rotting of roots. Isolations from 35 symptomatic roots collected in eight fields yielded 25 isolates identified as F. oxysporum (from single conidia grown on homemade potato dextrose agar and carnation leaf agar) (3). Pathogenicity was determined by dipping roots of 5-week-old sugar beet plants (cv. ACH 9363) in a suspension of 104 conidia per ml for 8 min (12 isolates, 10 to 12 plants per isolate). Plants were planted in Cone-tainers (3.8 cm diameter × 21 cm; Stuewe and Sons, Inc. Corvallis, OR) containing sterile soil. Three known cultures of F. oxysporum Schlecht. emend. Snyd. & Hans. f. sp. betae Stewart (= F. conglutinans var. betae Stewart [4]) also were included (13 and 216c from L. Hanson, USDA-ARS, Fort Collins, CO; 0-1122 from The Pennyslvania State University Fusarium Research Center). The control was sterile water. Plants were placed in a greenhouse at 24 to 27°C with natural light supplemented with illumination from high-pressure sodium-vapor lamps for 16 h daily and lightly fertilized biweekly to avoid chlorosis from nutrient deficiency. After 6 to 7 weeks, plants were rated for disease on a 0 to 4 scale: 0 = no disease; 1 = slight to extreme plant stunting, leaves may be wilted; 2 = chlorotic leaves, some with necrosis at margins; 3 = tap root dried and brown to black in color, leaves dying; and 4 = plant dead (1). The experiment was repeated. Disease severity differed between trials, but all isolates of F. oxysporum and F. oxysporum f. sp. betae resulted in disease ratings statistically (P < 0.05) greater than that of the water control. In Trial 1, isolates of F. oxysporum averaged a rating of 2.1 (range of 1.8 to 3.3) and F. oxysporum f. sp. betae averaged 2.1 (range of 2.0 to 2.2) compared with 0.1 for the water control. One isolate of F. oxysporum had a statistically higher rating than did the cultures of F. oxysporum f. sp. betae. In Trial 2, isolates of F. oxysporum averaged a rating of 3.3 (range of 2.7 to 3.7) and F. oxysporum f. sp. betae averaged 3.1 (range of 2.7 to 3.4) compared with 0.2 for the water control. Cultures of F. oxysporum (8 of 12) resulted in ratings statistically higher than that of the least pathogenic culture of F. oxysporum f. sp. betae. Cultures of F. oxysporum and F. oxysporum f. sp. betae recovered from inoculated plants were identical to those used to inoculate plants. To our knowledge, this is the first report of F. oxysporum f. sp. betae on sugar beet in the Red River Valley of Minnesota and North Dakota. The disease has been reported in California, Colorado, Montana, Nebraska, Oregon, Texas, and Wyoming (1,2). References: (1) R. A. Cramer et al. J. Phytopathol. 151:352, 2003. (2) G. A. Fisher and J. S. Gerik. Phytopathology 84:1098, 1994. (3) P. E. Nelson et al. Fusarium Species: An illustrated Manual for Identification. The Pennsylvania State University Press. University Park, 1983. (4) D. Stewart. Phytopathology 21:59, 1931.
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Affiliation(s)
- C E Windels
- University of Minnesota, NW Research and Outreach Center, Crookston 56716
| | - J R Brantner
- University of Minnesota, NW Research and Outreach Center, Crookston 56716
| | | | - M F R Khan
- Department of Soil Science, North Dakota State University, Fargo 58105
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Monoura P, Rahman M, Khan MFR, Rahman MB, Rahman MM. Effect of vitamins, minerals and probiotics on production of antibody and live weight gain following vaccination with BCRDV in broiler birds. ACTA ACUST UNITED AC 1970. [DOI: 10.3329/bjvm.v6i1.1336] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The effect of vitamins, minerals and probiotics supplementation to the balanced ration of the broiler chicks on the immune response and growth performance after vaccination with BCRDV was evaluated. For this 50 broiler birds were divided into five equal groups such as A, B, C, D and E, and five types of separate treatments with normal poultry feed were provided to the indivisual experimental groups. All the birds were vaccinated with BCRDV primarily at 3 days of age and boostered at 17 days of age. The birds of group A, B, C and D were supplemented with only probiotics, mixture of probiotics and minerals, mixture of probiotics, minerals and vitamins, respectively. The birds of group E were kept as vaccinated control. Blood samples were collected at the age of 9, 12, 16, 23, 26 and 30 days sequencially. The serum antibody titres were measured by HI test and ELISA. The highest value of HI antibody titre was 384±242.65 (Mean ±SD) in group B at 23 days of age. The lowest value of HI at 23 days was 56±32.86 (Mean ±SD) obtained in group C. The ELISA antibody titre was also highest (4675.12±485.72) at 23 days in group B and obviously the lowest (2169.38±724.45) in control group E. In case of group C, the ELISA antibody titre was 3105.73±877.57 at 23 days but then the titre decreased gradually compared to control group. The highest body weight (1420±90.82) was recorded at 30 days of age in group D and the lowest value (1188±44.38) was in group B. Key words: Probiotics, BCRDV, broiler birds DOI = 10.3329/bjvm.v6i1.1336 Bangl. J. Vet. Med. (2008). 6 (1): 31-36
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