1
|
Chora AF, Pedroso D, Kyriakou E, Pejanovic N, Colaço H, Gozzelino R, Barros A, Willmann K, Velho T, Moita CF, Santos I, Pereira P, Carvalho S, Martins FB, Ferreira JA, de Almeida SF, Benes V, Anrather J, Weis S, Soares MP, Geerlof A, Neefjes J, Sattler M, Messias AC, Neves-Costa A, Moita LF. DNA damage independent inhibition of NF-κB transcription by anthracyclines. eLife 2022; 11:77443. [PMID: 36476511 PMCID: PMC9771368 DOI: 10.7554/elife.77443] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 11/29/2022] [Indexed: 12/12/2022] Open
Abstract
Anthracyclines are among the most used and effective anticancer drugs. Their activity has been attributed to DNA double-strand breaks resulting from topoisomerase II poisoning and to eviction of histones from select sites in the genome. Here, we show that the extensively used anthracyclines Doxorubicin, Daunorubicin, and Epirubicin decrease the transcription of nuclear factor kappa B (NF-κB)-dependent gene targets, but not interferon-responsive genes in primary mouse (Mus musculus) macrophages. Using an NMR-based structural approach, we demonstrate that anthracyclines disturb the complexes formed between the NF-κB subunit RelA and its DNA-binding sites. The anthracycline variants Aclarubicin, Doxorubicinone, and the newly developed Dimethyl-doxorubicin, which share anticancer properties with the other anthracyclines but do not induce DNA damage, also suppressed inflammation, thus uncoupling DNA damage from the effects on inflammation. These findings have implications for anticancer therapy and for the development of novel anti-inflammatory drugs with limited side effects for life-threatening conditions such as sepsis.
Collapse
Affiliation(s)
- Angelo Ferreira Chora
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaLisboaPortugal
| | - Dora Pedroso
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | - Eleni Kyriakou
- Institute of Structural Biology, Molecular Targets and Therapeutics Center, Helmholtz Zentrum MünchenNeuherbergGermany,Bavarian NMR Centre, Department of Bioscience, School of Natural Sciences, Technical University of MunichGarchingGermany
| | - Nadja Pejanovic
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaLisboaPortugal
| | - Henrique Colaço
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | | | - André Barros
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | - Katharina Willmann
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | - Tiago Velho
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal,Centro Hospitalar Lisboa Norte - Hospital de Santa Maria, EPE, Avenida Professor Egas MonizLisbonPortugal
| | - Catarina F Moita
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | - Isa Santos
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal,Serviço de Cirurgia, Centro Hospitalar de SetúbalSetúbalPortugal
| | - Pedro Pereira
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaLisboaPortugal
| | - Silvia Carvalho
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaLisboaPortugal
| | - Filipa Batalha Martins
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaLisboaPortugal
| | - João A Ferreira
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de LisboaLisboaPortugal
| | | | | | - Josef Anrather
- Feil Family Brain and Mind Research Institute, Weill Cornell MedicineNew YorkUnited States
| | - Sebastian Weis
- Institute for Infectious Disease and Infection Control, Friedrich-Schiller UniversityJenaGermany,Department of Anesthesiology and Intensive Care Medicine, Jena University Hospital, Friedrich-Schiller UniversityJenaGermany,Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute (HKI)JenaGermany
| | - Miguel P Soares
- Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | - Arie Geerlof
- Institute of Structural Biology, Molecular Targets and Therapeutics Center, Helmholtz Zentrum MünchenNeuherbergGermany
| | - Jacques Neefjes
- Department of Cell and Chemical Biology, LUMCLeidenNetherlands
| | - Michael Sattler
- Institute of Structural Biology, Molecular Targets and Therapeutics Center, Helmholtz Zentrum MünchenNeuherbergGermany,Bavarian NMR Centre, Department of Bioscience, School of Natural Sciences, Technical University of MunichGarchingGermany
| | - Ana C Messias
- Institute of Structural Biology, Molecular Targets and Therapeutics Center, Helmholtz Zentrum MünchenNeuherbergGermany,Bavarian NMR Centre, Department of Bioscience, School of Natural Sciences, Technical University of MunichGarchingGermany
| | - Ana Neves-Costa
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal
| | - Luis Ferreira Moita
- Innate Immunity and Inflammation Laboratory, Instituto Gulbenkian de CiênciaOeirasPortugal,Instituto de Histologia e Biologia do Desenvolvimento, Faculdade de Medicina da Universidade de LisboaLisbonPortugal
| |
Collapse
|
2
|
Moreira S, Rodrigues R, Barros AB, Pejanovic N, Neves-Costa A, Pedroso D, Pereira C, Fernandes D, Rodrigues JV, Barbara C, Moita LF. Changes in Expression of the CLOCK Gene in Obstructive Sleep Apnea Syndrome Patients Are Not Reverted by Continuous Positive Airway Pressure Treatment. Front Med (Lausanne) 2017; 4:187. [PMID: 29164122 PMCID: PMC5681745 DOI: 10.3389/fmed.2017.00187] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2017] [Accepted: 10/16/2017] [Indexed: 11/13/2022] Open
Abstract
Purpose Metabolic syndrome and cardiovascular disease are strongly associated with obstructive sleep apnea syndrome (OSAS), which causes substantial changes to normal circadian physiological functions, including metabolic pathways. Because core clock genes are known to be modulated by sleep/vigilance cycles, we asked whether the expression level of mRNA coding for clock genes is altered in non-treated OSAS patients and if it can be corrected by standard continuous positive airway pressure (CPAP) treatment. Methods Peripheral blood was collected from male patients diagnosed with severe OSAS (apnea-hypopnea index ≥ 30/h) before and after treatment initiation. qPCR was used to measure mRNA levels of genes associated with the central circadian pacemaker including CLOCK, BMAL1, Cry1, Cry2, and three Period genes (Per 1, 2, 3) in peripheral blood mononuclear cells (PBMCs). Results We found statistically significant differences for CLOCK (p-value = 0.022) expression in PBMCs of OSAS patients which were not reverted by treatment with CPAP. We have also found a substantial decrease in the slow wave sleep (SWS) content in OSAS patients (p-value < 0.001) that, contrary to REM sleep, was not corrected by CPAP (p-value = 0.875). Conclusion CPAP treatment does not correct substantial changes in expression of core clock genes in OSAS patients. Because CPAP treatment is also unable to normalize the SWS in these patients, it is likely that additional therapeutic interventions that increase SWS content and complement the benefits of CPAP are required to more effectively reduce the known increased cardiovascular risk associated with OSAS patients.
Collapse
Affiliation(s)
- Susana Moreira
- Departamento de Pneumologia, Centro Hospitalar Lisboa Norte, EPE, Lisboa, Portugal.,Instituto Gulbenkian de Ciência, Oeiras, Portugal
| | - Raquel Rodrigues
- Instituto Gulbenkian de Ciência, Oeiras, Portugal.,Faculdade de Medicina, Instituto de Medicina Molecular, Universidade de Lisboa, Lisboa, Portugal
| | | | - Nadja Pejanovic
- Faculdade de Medicina, Instituto de Medicina Molecular, Universidade de Lisboa, Lisboa, Portugal
| | | | - Dora Pedroso
- Instituto Gulbenkian de Ciência, Oeiras, Portugal
| | - Cláudia Pereira
- Departamento de Pneumologia, Centro Hospitalar Lisboa Norte, EPE, Lisboa, Portugal
| | - Dina Fernandes
- Departamento de Pneumologia, Centro Hospitalar Lisboa Norte, EPE, Lisboa, Portugal
| | | | - Cristina Barbara
- Departamento de Pneumologia, Centro Hospitalar Lisboa Norte, EPE, Lisboa, Portugal
| | | |
Collapse
|
3
|
Marjanovic I, Kostic J, Stanic B, Pejanovic N, Lucic B, Karan-Djurasevic T, Janic D, Dokmanovic L, Jankovic S, Vukovic NS, Tomin D, Perisic O, Rakocevic G, Popovic M, Pavlovic S, Tosic N. Parallel targeted next generation sequencing of childhood and adult acute myeloid leukemia patients reveals uniform genomic profile of the disease. Tumour Biol 2016; 37:13391-13401. [DOI: 10.1007/s13277-016-5142-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 07/11/2016] [Indexed: 12/30/2022] Open
|
4
|
Todorovic Balint M, Jelicic J, Mihaljevic B, Kostic J, Stanic B, Balint B, Pejanovic N, Lucic B, Tosic N, Marjanovic I, Stojiljkovic M, Karan-Djurasevic T, Perisic O, Rakocevic G, Popovic M, Raicevic S, Bila J, Antic D, Andjelic B, Pavlovic S. Gene Mutation Profiles in Primary Diffuse Large B Cell Lymphoma of Central Nervous System: Next Generation Sequencing Analyses. Int J Mol Sci 2016; 17:E683. [PMID: 27164089 PMCID: PMC4881509 DOI: 10.3390/ijms17050683] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Revised: 04/19/2016] [Accepted: 04/27/2016] [Indexed: 12/14/2022] Open
Abstract
The existence of a potential primary central nervous system lymphoma-specific genomic signature that differs from the systemic form of diffuse large B cell lymphoma (DLBCL) has been suggested, but is still controversial. We investigated 19 patients with primary DLBCL of central nervous system (DLBCL CNS) using the TruSeq Amplicon Cancer Panel (TSACP) for 48 cancer-related genes. Next generation sequencing (NGS) analyses have revealed that over 80% of potentially protein-changing mutations were located in eight genes (CTNNB1, PIK3CA, PTEN, ATM, KRAS, PTPN11, TP53 and JAK3), pointing to the potential role of these genes in lymphomagenesis. TP53 was the only gene harboring mutations in all 19 patients. In addition, the presence of mutated TP53 and ATM genes correlated with a higher total number of mutations in other analyzed genes. Furthermore, the presence of mutated ATM correlated with poorer event-free survival (EFS) (p = 0.036). The presence of the mutated SMO gene correlated with earlier disease relapse (p = 0.023), inferior event-free survival (p = 0.011) and overall survival (OS) (p = 0.017), while mutations in the PTEN gene were associated with inferior OS (p = 0.048). Our findings suggest that the TP53 and ATM genes could be involved in the molecular pathophysiology of primary DLBCL CNS, whereas mutations in the PTEN and SMO genes could affect survival regardless of the initial treatment approach.
Collapse
Affiliation(s)
- Milena Todorovic Balint
- Clinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia.
- Faculty of Medicine, University of Belgrade, Belgrade 11000, Serbia.
| | - Jelena Jelicic
- Clinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia.
| | - Biljana Mihaljevic
- Clinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia.
- Faculty of Medicine, University of Belgrade, Belgrade 11000, Serbia.
| | - Jelena Kostic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Bojana Stanic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Bela Balint
- Institute of Transfusiology and Hemobiology of Military Medical Academy, Belgrade 11000, Serbia.
| | - Nadja Pejanovic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Bojana Lucic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Natasa Tosic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Irena Marjanovic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Maja Stojiljkovic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | - Teodora Karan-Djurasevic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| | | | | | | | - Sava Raicevic
- Department of Histopathology, Clinical Center of Serbia, Belgrade 11000, Serbia.
| | - Jelena Bila
- Clinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia.
- Faculty of Medicine, University of Belgrade, Belgrade 11000, Serbia.
| | - Darko Antic
- Clinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia.
- Faculty of Medicine, University of Belgrade, Belgrade 11000, Serbia.
| | - Bosko Andjelic
- Clinic for Hematology, Clinical Center of Serbia, Belgrade 11000, Serbia.
- Faculty of Medicine, University of Belgrade, Belgrade 11000, Serbia.
| | - Sonja Pavlovic
- Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade 11010, Serbia.
| |
Collapse
|
5
|
Hochrainer K, Pejanovic N, Olaseun VA, Zhang S, Iadecola C, Anrather J. The ubiquitin ligase HERC3 attenuates NF-κB-dependent transcription independently of its enzymatic activity by delivering the RelA subunit for degradation. Nucleic Acids Res 2015; 43:9889-904. [PMID: 26476452 PMCID: PMC4787756 DOI: 10.1093/nar/gkv1064] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Accepted: 10/06/2015] [Indexed: 11/21/2022] Open
Abstract
Activation of NF-κB-dependent transcription represents an important hallmark of inflammation. While the acute inflammatory response is per se beneficial, it can become deleterious if its spatial and temporal profile is not tightly controlled. Classically, NF-κB activity is limited by cytoplasmic retention of the NF-κB dimer through binding to inhibitory IκB proteins. However, increasing evidence suggests that NF-κB activity can also be efficiently contained by direct ubiquitination of NF-κB subunits. Here, we identify the HECT-domain ubiquitin ligase HERC3 as novel negative regulator of NF-κB activity. We find that HERC3 restricts NF-κB nuclear import and DNA binding without affecting IκBα degradation. Instead HERC3 indirectly binds to the NF-κB RelA subunit after liberation from IκBα inhibitor leading to its ubiquitination and protein destabilization. Remarkably, the regulation of RelA activity by HERC3 is independent of its inherent ubiquitin ligase activity. Rather, we show that HERC3 and RelA are part of a multi-protein complex containing the proteasome as well as the ubiquitin-like protein ubiquilin-1 (UBQLN1). We present evidence that HERC3 and UBQLN1 provide a link between NF-κB RelA and the 26S proteasome, thereby facilitating RelA protein degradation. Our findings establish HERC3 as novel candidate regulating the inflammatory response initiated by NF-κB.
Collapse
Affiliation(s)
- Karin Hochrainer
- Feil Family Brain and Mind Research Institute, Weill Cornell Medical College, New York, NY10065, USA
| | - Nadja Pejanovic
- Feil Family Brain and Mind Research Institute, Weill Cornell Medical College, New York, NY10065, USA Instituto Gulbenkian de Ciência, Apartado 14, Oeiras, Portugal
| | | | - Sheng Zhang
- Institute of Biotechnology and Life Sciences Biotechnologies, Cornell University, Ithaca, NY14853, USA
| | - Costantino Iadecola
- Feil Family Brain and Mind Research Institute, Weill Cornell Medical College, New York, NY10065, USA
| | - Josef Anrather
- Feil Family Brain and Mind Research Institute, Weill Cornell Medical College, New York, NY10065, USA
| |
Collapse
|
6
|
Kusic-Tisma J, Divac Rankov A, Ljujic M, Pejanovic N, Stanic B, Radojkovic D. ePS01.6 Application of next-generation sequencing for the analysis of CFTR in Serbian CF patients. J Cyst Fibros 2015. [DOI: 10.1016/s1569-1993(15)30136-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
7
|
Moreira S, Rodrigues R, Pejanovic N, Rodrigues J, Barbara C, Ferreira Moita L. The expression of the Per2 clock gene is up-regulated in non-treated osas patients and normalizes its mRNA levels upon positive pressure treatment. Sleep Med 2013. [DOI: 10.1016/j.sleep.2013.11.025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
8
|
Figueiredo N, Chora A, Raquel H, Pejanovic N, Pereira P, Hartleben B, Neves-Costa A, Moita C, Pedroso D, Pinto A, Marques S, Faridi H, Costa P, Gozzelino R, Zhao JL, Soares MP, Gama-Carvalho M, Martinez J, Zhang Q, Döring G, Grompe M, Simas JP, Huber TB, Baltimore D, Gupta V, Green DR, Ferreira JA, Moita LF. Anthracyclines induce DNA damage response-mediated protection against severe sepsis. Immunity 2013; 39:874-84. [PMID: 24184056 DOI: 10.1016/j.immuni.2013.08.039] [Citation(s) in RCA: 109] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2013] [Accepted: 08/13/2013] [Indexed: 12/24/2022]
Abstract
Severe sepsis remains a poorly understood systemic inflammatory condition with high mortality rates and limited therapeutic options in addition to organ support measures. Here we show that the clinically approved group of anthracyclines acts therapeutically at a low dose regimen to confer robust protection against severe sepsis in mice. This salutary effect is strictly dependent on the activation of DNA damage response and autophagy pathways in the lung, as demonstrated by deletion of the ataxia telangiectasia mutated (Atm) or the autophagy-related protein 7 (Atg7) specifically in this organ. The protective effect of anthracyclines occurs irrespectively of pathogen burden, conferring disease tolerance to severe sepsis. These findings demonstrate that DNA damage responses, including the ATM and Fanconi Anemia pathways, are important modulators of immune responses and might be exploited to confer protection to inflammation-driven conditions, including severe sepsis.
Collapse
Affiliation(s)
- Nuno Figueiredo
- Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa, 1649-028 Lisboa, Portugal; Clínica Universitária de Cirurgia I, Centro Hospitalar Lisboa Norte, EPE, 1649-028 Lisboa, Portugal; Gulbenkian Programme for Advanced Medical Education, 2780-156 Oeiras, Portugal; Champalimaud Foundation, 1400-038 Lisboa, Portugal
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
9
|
Pejanovic N, Hochrainer K, Liu T, Aerne BL, Soares MP, Anrather J. Regulation of nuclear factor κB (NF-κB) transcriptional activity via p65 acetylation by the chaperonin containing TCP1 (CCT). PLoS One 2012; 7:e42020. [PMID: 22860050 PMCID: PMC3409233 DOI: 10.1371/journal.pone.0042020] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Accepted: 07/02/2012] [Indexed: 01/24/2023] Open
Abstract
The NF-κB family member p65 is central to inflammation and immunity. The purpose of this study was to identify and characterize evolutionary conserved genes modulating p65 transcriptional activity. Using an RNAi screening approach, we identified chaperonin containing TCP1 subunit η (CCTη) as a regulator of Drosophila NF-κB proteins, Dorsal and Dorsal-related immunity factor (Dif). CCTη was also found to regulate NF-κB-driven transcription in mammalian cells, acting in a promoter-specific context, downstream of IκB kinase (IKK). CCTη knockdown repressed IκBα and CXCL2/MIP2 transcription during the early phase of NF-κB activation while impairing the termination of CCL5/RANTES and CXCL10/IP10 transcription. The latter effect was associated with increased DNA binding and reduced p65 acetylation, presumably by altering the activity of histone acetyltransferase CREB-binding protein (CBP). We identified p65 lysines (K) 122 and 123 as target residues mediating the CCTη-driven termination of NF-κB-dependent transcription. We propose that CCTη regulates NF-κB activity in a manner that resolves inflammation.
Collapse
Affiliation(s)
- Nadja Pejanovic
- Division of Neurobiology, Department of Neurology and Neuroscience, Weill Cornell Medical College, New York, New York, United States of America
| | | | | | | | | | | |
Collapse
|
10
|
Seldon MP, Silva G, Pejanovic N, Larsen R, Gregoire IP, Filipe J, Anrather J, Soares MP. Heme Oxygenase-1 Inhibits the Expression of Adhesion Molecules Associated with Endothelial Cell Activation via Inhibition of NF-κB RelA Phosphorylation at Serine 276. J Immunol 2007; 179:7840-51. [DOI: 10.4049/jimmunol.179.11.7840] [Citation(s) in RCA: 114] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|