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Lyu Q, Dhagia V, Han Y, Guo B, Wines-Samuelson ME, Christie CK, Yin Q, Slivano OJ, Herring P, Long X, Gupte SA, Miano JM. CRISPR-Cas9-Mediated Epitope Tagging Provides Accurate and Versatile Assessment of Myocardin-Brief Report. Arterioscler Thromb Vasc Biol 2019; 38:2184-2190. [PMID: 29976770 DOI: 10.1161/atvbaha.118.311171] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Objective- Unreliable antibodies often hinder the accurate detection of an endogenous protein, and this is particularly true for the cardiac and smooth muscle cofactor, MYOCD (myocardin). Accordingly, the mouse Myocd locus was targeted with 2 independent epitope tags for the unambiguous expression, localization, and activity of MYOCD protein. Approach and Results- 3cCRISPR (3-component clustered regularly interspaced short palindromic repeat) was used to engineer a carboxyl-terminal 3×FLAG or 3×HA epitope tag in mouse embryos. Western blotting with antibodies to each tag revealed a MYOCD protein product of ≈150 kDa, a size considerably larger than that reported in virtually all publications. MYOCD protein was most abundant in some adult smooth muscle-containing tissues with surprisingly low-level expression in the heart. Both alleles of Myocd are active in aorta because a 2-fold increase in protein was seen in mice homozygous versus heterozygous for FLAG-tagged Myocd. ChIP (chromatin immunoprecipitation)-quantitative polymerase chain reaction studies provide proof-of-principle data demonstrating the utility of this mouse line in conducting genome-wide ChIP-seq studies to ascertain the full complement of MYOCD-dependent target genes in vivo. Although FLAG-tagged MYOCD protein was undetectable in sections of adult mouse tissues, low-passaged vascular smooth muscle cells exhibited expected nuclear localization. Conclusions- This report validates new mouse models for analyzing MYOCD protein expression, localization, and binding activity in vivo and highlights the need for rigorous authentication of antibodies in biomedical research.
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Affiliation(s)
- Qing Lyu
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Vidhi Dhagia
- Department of Pharmacology, New York Medical College, Valhalla (V.D., S.A.G.)
| | - Yu Han
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Bing Guo
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Mary E Wines-Samuelson
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Christine K Christie
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Qiangzong Yin
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Orazio J Slivano
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
| | - Paul Herring
- Department of Cellular and Integrative Physiology, Indiana University School of Medicine, Indianapolis (P.H.)
| | - Xiaochun Long
- Department of Molecular and Cellular Physiology, Albany Medical College, NY (X.L.)
| | - Sachin A Gupte
- Department of Pharmacology, New York Medical College, Valhalla (V.D., S.A.G.)
| | - Joseph M Miano
- From the Aab Cardiovascular Research Institute, University of Rochester Medical Center, Rochester, NY (Q.L., Y.H., B.G., M.E.W.-S., C.K.C., Q.Y., O.J.S., J.M.M.)
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Abstract
Purpose
The picture exchange communication system (PECS) is an established communication intervention for non-verbal children with autism. The purpose of this paper is to present an evaluation of a computer-based PECS approach, in which young non-verbal children with autism respond to an on-screen “virtual tutor” through the manipulation of picture/symbol cards. The paper presents research to investigate how the virtual tutor’s voice influences the children’s participation and performance.
Design/methodology/approach
Eight non-verbal children between six and nine years old and with a diagnosis of autism were presented with a series of computer-based activities, using a virtual tutor with either a natural or synthetic voice, in two separate sessions. Data were gathered using a within-participants counterbalanced design to control against variations between individuals and effects of presentation order.
Findings
Analysis of the children’s responses suggest that they were able to use the system more effectively when the virtual tutor had a synthetic voice, rather than a human voice. The findings demonstrate that a computer-based virtual tutor can provide an engaging method of supporting symbol-based communication for non-verbal children with autism, and that a synthetic voice type was preferable for the sessions undertaken.
Originality/value
Investigations of voice type and its influence on non-verbal children’s participation and performance have so far provided inconclusive results (Ramdoss, 2013). This research suggests that the voice type is an important feature of the learning experience of non-verbal children with autism, and can have a significant influence on their participation and performance in virtual tutor-led learning.
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Qian S, Hoggatt A, Jones-Hall YL, Ware CF, Herring P, Seye CI. Deletion of P2Y2 receptor reveals a role for lymphotoxin-α in fatty streak formation. Vascul Pharmacol 2016; 85:11-20. [PMID: 27355755 PMCID: PMC5453728 DOI: 10.1016/j.vph.2016.06.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2016] [Revised: 05/02/2016] [Accepted: 06/02/2016] [Indexed: 11/15/2022]
Abstract
Background Lymphotoxin alpha (LTα) is expressed in human atherosclerotic lesions and genetic variations in the LTα pathway have been linked to myocardial infarction. Activation of the P2Y2 nucleotide receptor (P2Y2R) regulates the production of LTα. in vitro. We aimed to uncover a potential pathway linking purinergic receptor to LTα-mediated inflammatory processes pivotal to the early stages of atherosclerosis in apolipoprotein E (ApoE−/−) deficient mice. Methods and results En face immunostaining revealed that P2Y2R and VCAM-1 are preferentially expressed in the atherosclerosis prone site of the mouse aortic sinus. Deletion of the P2Y2R gene suppresses VCAM-1 expression. Compared with ApoE−/−mice, ApoE−/−mice lacking the P2Y2R gene (ApoE−/−/P2Y2R−/−) did not develop fatty streak lesions when fed a standard chow diet for 15 weeks. Systemic and CD4+ T cell production of the pro-inflammatory cytokine lymphotoxin-alpha (LTα) were specifically inhibited in ApoE−/−/P2Y2R−/− mice. Anti-LTα preventive treatment was initiated in ApoE−/− mice with intraperitoneal administration of recombinant human tumor necrosis factor receptor 1 fusion protein (TNFR1-Fc) on 5 consecutive days before the disease onset. Remarkably, none of the TNFR1:Fc-treated ApoE−/− mice exhibited atherosclerotic lesions at any developmental stage. Significance ApoE−/− mice deficient in P2Y2R exhibit low endothelial cell VCAM-1 levels, decreased production of LTα and delayed onset of atherosclerosis. These data suggest that targeting this nucleotide receptor could be an effective therapeutic approach in atherosclerosis.
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Affiliation(s)
- Shaomin Qian
- Department of Cellular & Integrative Physiology, Indiana University School of Medicine, 635 Barnhill Drive MS 332, Indianapolis, IN 46202, United States
| | - April Hoggatt
- Department of Cellular & Integrative Physiology, Indiana University School of Medicine, 635 Barnhill Drive MS 332, Indianapolis, IN 46202, United States
| | - Yava L Jones-Hall
- Department of Comparative Pathobiology, Purdue University, College of Veterinary Medicine, 725 Harrison Street VPTH 124, West Lafayette, IN 47907-2027, United States
| | - Carl F Ware
- Sanford-Burnham Medical Institute, La Jolla, CA 92037, United States
| | - Paul Herring
- Department of Cellular & Integrative Physiology, Indiana University School of Medicine, 635 Barnhill Drive MS 332, Indianapolis, IN 46202, United States
| | - Cheikh I Seye
- Department of Cellular & Integrative Physiology, Indiana University School of Medicine, 635 Barnhill Drive MS 332, Indianapolis, IN 46202, United States.
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Herring P, Khachatryan L, Lomnicki S, Dellinger B. Paramagnetic centers in particulate formed from the oxidative pyrolysis of 1-methylnaphthalene in the presence of Fe(III) 2O 3 nanoparticles. Combust Flame 2013; 160:2996-3003. [PMID: 25673882 PMCID: PMC4321761 DOI: 10.1016/j.combustflame.2013.06.025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
The identity of radical species associated with particulate formed from the oxidative pyrolysis of 1-methylnaphthalene (1-MN) was investigated using low temperature matrix isolation electron paramagnetic resonance spectroscopy (LTMI-EPR), a specialized technique that provided a method of sampling and analysis of the gas-phase paramagnetic components. A superimposed EPR signal was identified to be a mixture of organic radicals (carbon and oxygen-centered) and soot. The carbon-centered radicals were identified as a mixture of the resonance-stabilized indenyl, cyclopentadienyl, and naphthalene 1-methylene radicals through the theoretical simulation of the radical's hyperfine structure. Formation of these radical species was promoted by the addition of Fe(III)2O3 nanoparticles. Enhanced formation of resonance stabilized radicals from the addition of Fe(III)2O3 nanoparticles can account for the observed increased sooting tendency associated with Fe(III)2O3 nanoparticle addition.
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Affiliation(s)
- Paul Herring
- Louisiana State University, Department of Chemistry, Baton Rouge, LA 70803, USA
| | - Lavrent Khachatryan
- Louisiana State University, Department of Chemistry, Baton Rouge, LA 70803, USA
| | - Slawomir Lomnicki
- Louisiana State University, Department of Chemistry, Baton Rouge, LA 70803, USA
| | - Barry Dellinger
- Louisiana State University, Department of Chemistry, Baton Rouge, LA 70803, USA
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Touw K, Chakraborty S, Zhang W, Tune J, Obukhov A, Gunst S, Herring P. The effects of Type 1 diabetes on colon smooth muscle. FASEB J 2011. [DOI: 10.1096/fasebj.25.1_supplement.1123.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Ketrija Touw
- PhysiologyIndiana University School of MedicineIndianapolisIN
| | | | - Wenwu Zhang
- PhysiologyIndiana University School of MedicineIndianapolisIN
| | - Johnathan Tune
- PhysiologyIndiana University School of MedicineIndianapolisIN
| | | | - Susan Gunst
- PhysiologyIndiana University School of MedicineIndianapolisIN
| | - Paul Herring
- PhysiologyIndiana University School of MedicineIndianapolisIN
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Zhang M, Fang H, Zhou J, Herring P. A novel role of Brg1 in the regulation of SRF/MRTFA‐dependent smooth muscle‐specific genes. FASEB J 2007. [DOI: 10.1096/fasebj.21.5.a654-c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Min Zhang
- Cellular and Integrative PhysiologyIndiana University School of MedicineRoom 350#, 635 Barnhill Dr.IndianapolisIN46202
| | - Hong Fang
- Cellular and Integrative PhysiologyIndiana University School of MedicineRoom 350#, 635 Barnhill Dr.IndianapolisIN46202
| | - Jiliang Zhou
- Cellular and Integrative PhysiologyIndiana University School of MedicineRoom 350#, 635 Barnhill Dr.IndianapolisIN46202
| | - Paul Herring
- Cellular and Integrative PhysiologyIndiana University School of MedicineRoom 350#, 635 Barnhill Dr.IndianapolisIN46202
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Argiolas A, Herring P, Pisano JJ. Amino acid sequence of bumblebee MCD peptide: a new mast cell degranulating peptide from the venom of the bumblebee Megabombus pennsylvanicus. Peptides 1985; 6 Suppl 3:431-6. [PMID: 2421265 DOI: 10.1016/0196-9781(85)90410-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A new 28 amino acid peptide, we recently isolated from the venom of the bumblebee Megabombus pennsylvanicus. has been characterized. The peptide, Met-Cys-Ile-Cys-Lys-Asn-Gly-Lys-Pro-Leu-Pro-Gly-Phe-Ile-Gly-Lys-Ile-Cys- Arg-Lys-Ile-Cys-Met-Met-Gln-Gln-Thr-His(NH2), has been named bumblebee mast cell degranulating (MCD) peptide due to its ability to degranulate rat peritoneal mast cells, and its resemblance to the bee venom MCD peptide. Bumblebee MCD peptide, unlike bombolitins, the other mast cell degranulating heptadecapeptides of bumblebee venom, is not lytic and releases histamine at a dose as low as 0.05 micrograms/ml (1.6 X 10(-8) M).
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