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Voigt C, Dubbert M, Launiainen S, Porada P, Oestmann J, Piayda A. Impact of vegetation composition and seasonality on sensitivity of modelled CO 2 exchange in temperate raised bogs. Sci Rep 2024; 14:11023. [PMID: 38744922 PMCID: PMC11094101 DOI: 10.1038/s41598-024-61229-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 05/02/2024] [Indexed: 05/16/2024] Open
Abstract
Encroachment of vascular plants (VP) in temperate raised bogs, as a consequence of altered hydrological conditions and nutrient input, is widely observed. Effects of such vegetation shift on water and carbon cycles are, however, largely unknown and identification of responsible plant physiological traits is challenging. Process-based modelling offers the opportunity of gaining insights into ecosystem functioning beyond observations, and to infer decisive trait shifts of plant functional groups. We adapted the Soil-Vegetation-Atmosphere Transfer model pyAPES to a temperate raised bog site by calibration against measured peat temperature, water table and surface CO2 fluxes. We identified the most important traits determining CO2 fluxes by conducting Morris sensitivity analysis (MSA) under changing conditions throughout the year and simulated VP encroachment. We further investigated transferability of results to other sites by extending MSA to parameter ranges derived from literature review. We found highly variable intra-annual plant traits importance determining ecosystem CO2 fluxes, but only a partial shift of importance of photosynthetic processes from moss to VP during encroachment. Ecosystem respiration was dominated by peat respiration. Overall, carboxylation rate, base respiration rate and temperature sensitivity (Q10) were most important for determining bog CO2 balance and parameter ranking was robust even under the extended MSA.
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Affiliation(s)
- Claas Voigt
- Leibniz Centre for Agricultural Landscape Research (ZALF), Eberswalder Straße 84, 15374, Müncheberg, Germany.
- Thünen Institute of Climate-Smart Agriculture, Bundesallee 65A, 38116, Braunschweig, Germany.
| | - Maren Dubbert
- Leibniz Centre for Agricultural Landscape Research (ZALF), Eberswalder Straße 84, 15374, Müncheberg, Germany
| | - Samuli Launiainen
- Natural Resources Institute Finland (LUKE), Latokartanonkaari 9, 00790, Helsinki, Finland
| | - Philipp Porada
- Institute of Plant Science and Microbiology, Universität Hamburg, Ohnhorststr. 18, 22609, Hamburg, Germany
| | - Jan Oestmann
- Thünen Institute of Climate-Smart Agriculture, Bundesallee 65A, 38116, Braunschweig, Germany
| | - Arndt Piayda
- Thünen Institute of Climate-Smart Agriculture, Bundesallee 65A, 38116, Braunschweig, Germany
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2
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Van Stan JT, Allen ST, Aubrey DP, Berry ZC, Biddick M, Coenders-Gerrits MAMJ, Giordani P, Gotsch SG, Gutmann ED, Kuzyakov Y, Magyar D, Mella VSA, Mueller KE, Ponette-González AG, Porada P, Rosenfeld CE, Simmons J, Sridhar KR, Stubbins A, Swanson T. Shower thoughts: why scientists should spend more time in the rain. Bioscience 2023; 73:441-452. [PMID: 37397836 PMCID: PMC10308363 DOI: 10.1093/biosci/biad044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 04/17/2023] [Accepted: 04/26/2023] [Indexed: 07/04/2023] Open
Abstract
Stormwater is a vital resource and dynamic driver of terrestrial ecosystem processes. However, processes controlling interactions during and shortly after storms are often poorly seen and poorly sensed when direct observations are substituted with technological ones. We discuss how human observations complement technological ones and the benefits of scientists spending more time in the storm. Human observation can reveal ephemeral storm-related phenomena such as biogeochemical hot moments, organismal responses, and sedimentary processes that can then be explored in greater resolution using sensors and virtual experiments. Storm-related phenomena trigger lasting, oversized impacts on hydrologic and biogeochemical processes, organismal traits or functions, and ecosystem services at all scales. We provide examples of phenomena in forests, across disciplines and scales, that have been overlooked in past research to inspire mindful, holistic observation of ecosystems during storms. We conclude that technological observations alone are insufficient to trace the process complexity and unpredictability of fleeting biogeochemical or ecological events without the shower thoughts produced by scientists' human sensory and cognitive systems during storms.
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Affiliation(s)
| | - Scott T Allen
- Department of Natural Resources and Environmental Science at the University of Nevada-Reno, Reno, Nevada, United States
| | - Douglas P Aubrey
- Savannah River Ecology Lab and with the Warnell School of Forestry at the University of Georgia, Athens, Georgia, United States
| | - Z Carter Berry
- Department of Biology at Wake Forest University, Winston-Salem, North Carolina, United States
| | - Matthew Biddick
- Terrestrial Ecology Research Group at the Technical University of Munich, Freising, Germany
| | | | - Paolo Giordani
- Dipartimento di Farmacia at the University of Genoa, Genoa, Italy
| | - Sybil G Gotsch
- Department of Forestry and Natural Resources at the University of Kentucky, Lexington, Kentucky, United States
| | - Ethan D Gutmann
- Research Applications Laboratory, at the National Center for Atmospheric Research, Boulder, Colorado, United States
| | - Yakov Kuzyakov
- Department of Soil Science of Temperate Systems, Agricultural Soil Science, at Georg-August-Universität, Göttingen, Germany
- Peoples Friendship University of Russia, Moscow, Russia
| | - Donát Magyar
- National Public Health Center, Budapest, Hungary
| | - Valentina S A Mella
- Sydney School of Veterinary Science, at the University of Sydney, Sydney, New South Wales, Australia
| | - Kevin E Mueller
- Department of Biological, Geological, and Environmental Sciences at Cleveland State University, Cleveland, Ohio, United States
| | - Alexandra G Ponette-González
- Department of City and Metropolitan Planning and with the Natural History Museum of Utah at the University of Utah, Salt Lake City, Utah, United States
| | - Philipp Porada
- Department of Biology at Universität Hamburg, Hamburg, Germany
| | - Carla E Rosenfeld
- Department of Minerals and Earth Sciences at the Carnegie Museum of Natural History, Pittsburgh, Pennsylvania, United States
| | - Jack Simmons
- Department of Philosophy and Religious Studies at Georgia Southern University, Statesboro, Georgia, United States
| | - Kandikere R Sridhar
- Department of Biosciences at Mangalore University, Konaje, Mangaluru, Karnataka, India
| | - Aron Stubbins
- Departments of Marine and Environmental Science, Civil and Environmental Engineering, and Chemistry and Chemical Biology at Northeastern University, Boston, Massachusetts, United States
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Porada P, Bader MY, Berdugo MB, Colesie C, Ellis CJ, Giordani P, Herzschuh U, Ma Y, Launiainen S, Nascimbene J, Petersen I, Raggio Quílez J, Rodríguez-Caballero E, Rousk K, Sancho LG, Scheidegger C, Seitz S, Van Stan JT, Veste M, Weber B, Weston DJ. A research agenda for nonvascular photoautotrophs under climate change. New Phytol 2023; 237:1495-1504. [PMID: 36511294 DOI: 10.1111/nph.18631] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 11/17/2022] [Indexed: 06/17/2023]
Abstract
Nonvascular photoautotrophs (NVP), including bryophytes, lichens, terrestrial algae, and cyanobacteria, are increasingly recognized as being essential to ecosystem functioning in many regions of the world. Current research suggests that climate change may pose a substantial threat to NVP, but the extent to which this will affect the associated ecosystem functions and services is highly uncertain. Here, we propose a research agenda to address this urgent question, focusing on physiological and ecological processes that link NVP to ecosystem functions while also taking into account the substantial taxonomic diversity across multiple ecosystem types. Accordingly, we developed a new categorization scheme, based on microclimatic gradients, which simplifies the high physiological and morphological diversity of NVP and world-wide distribution with respect to several broad habitat types. We found that habitat-specific ecosystem functions of NVP will likely be substantially affected by climate change, and more quantitative process understanding is required on: (1) potential for acclimation; (2) response to elevated CO2 ; (3) role of the microbiome; and (4) feedback to (micro)climate. We suggest an integrative approach of innovative, multimethod laboratory and field experiments and ecophysiological modelling, for which sustained scientific collaboration on NVP research will be essential.
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Affiliation(s)
- Philipp Porada
- Ecological Modelling, Universität Hamburg, Ohnhorststr. 18, 22609, Hamburg, Germany
| | - Maaike Y Bader
- Ecological Plant Geography, University of Marburg, Deutschhausstr. 10, 35032, Marburg, Germany
| | - Monica B Berdugo
- Ecological Plant Geography, University of Marburg, Deutschhausstr. 10, 35032, Marburg, Germany
| | - Claudia Colesie
- School of Geosciences, University of Edinburgh, Edinburgh, EH9 3JW, UK
| | | | | | - Ulrike Herzschuh
- Polar Terrestrial Environmental Systems, Alfred Wegener Institute, Telegrafenberg A45, 14473, Potsdam, Germany
| | - Yunyao Ma
- Ecological Modelling, Universität Hamburg, Ohnhorststr. 18, 22609, Hamburg, Germany
| | - Samuli Launiainen
- Ecosystems and Modeling, Natural Resources Institute Finland (Luke), Latokartanonkaari 9, 00790, Helsinki, Finland
| | - Juri Nascimbene
- BIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, 40126, Bologna, Italy
| | - Imke Petersen
- Ecological Modelling, Universität Hamburg, Ohnhorststr. 18, 22609, Hamburg, Germany
| | - José Raggio Quílez
- Department of Pharmacology, Pharmacognosy and Botany, Universidad Complutense de Madrid, E-28040, Madrid, Spain
| | | | - Kathrin Rousk
- Department of Biology, University of Copenhagen, Universitetsparken 15, 2100, København, Denmark
| | - Leopoldo G Sancho
- Department of Pharmacology, Pharmacognosy and Botany, Universidad Complutense de Madrid, E-28040, Madrid, Spain
| | - Christoph Scheidegger
- Biodiversity and Conservation Biology, Eidg. Forschungsanstalt WSL, Zürcherstr. 111, 8903, Birmensdorf, Switzerland
| | - Steffen Seitz
- Soil Science and Geomorphology, University of Tübingen, Rümelinstr. 19-23, 72070, Tübingen, Germany
| | - John T Van Stan
- Department of Biological, Geological, and Environmental Sciences, Cleveland State University, 2121 Euclid Ave., Cleveland, OH, 44115, USA
| | - Maik Veste
- Institute of Environmental Sciences, Brandenburgische Technische Universität Cottbus-Senftenberg, Konrad-Wachsmann-Allee 6, 03046, Cottbus, Germany
| | - Bettina Weber
- Division of Plant Sciences, Institute for Biology, University of Graz, Holteigasse 6, A-8010, Graz, Austria
- Multiphase Chemistry Department, Max Planck Institute for Chemistry, Hahn-Meitner-Weg 1, 55128, Mainz, Germany
| | - David J Weston
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
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Ren L, Jensen K, Porada P, Mueller P. Biota-mediated carbon cycling-A synthesis of biotic-interaction controls on blue carbon. Ecol Lett 2022; 25:521-540. [PMID: 35006633 DOI: 10.1111/ele.13940] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Revised: 08/03/2021] [Accepted: 11/02/2021] [Indexed: 01/22/2023]
Abstract
Research into biotic interactions has been a core theme of ecology for over a century. However, despite the obvious role that biota play in the global carbon cycle, the effects of biotic interactions on carbon pools and fluxes are poorly understood. Here we develop a conceptual framework that illustrates the importance of biotic interactions in regulating carbon cycling based on a literature review and a quantitative synthesis by means of meta-analysis. Our study focuses on blue carbon ecosystems-vegetated coastal ecosystems that function as the most effective long-term CO2 sinks of the biosphere. We demonstrate that a multitude of mutualistic, competitive and consumer-resource interactions between plants, animals and microbiota exert strong effects on carbon cycling across various spatial scales ranging from the rhizosphere to the landscape scale. Climate change-sensitive abiotic factors modulate the strength of biotic-interaction effects on carbon fluxes, suggesting that the importance of biota-mediated carbon cycling will change under future climatic conditions. Strong effects of biotic interactions on carbon cycling imply that biosphere-climate feedbacks may not be sufficiently represented in current Earth system models. Inclusion of new functional groups in these models, and new approaches to simplify species interactions, may thus improve the predictions of biotic effects on the global climate.
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Affiliation(s)
- Linjing Ren
- Institute of Plant Science and Microbiology, Universität Hamburg, Hamburg, Germany.,State Key Laboratory of Estuarine and Coastal Research, East China Normal University, Shanghai, P. R. China
| | - Kai Jensen
- Institute of Plant Science and Microbiology, Universität Hamburg, Hamburg, Germany
| | - Philipp Porada
- Institute of Plant Science and Microbiology, Universität Hamburg, Hamburg, Germany
| | - Peter Mueller
- Institute of Plant Science and Microbiology, Universität Hamburg, Hamburg, Germany.,Smithsonian Environmental Research Center, Edgewater, Maryland, USA
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Beer C, Zimov N, Olofsson J, Porada P, Zimov S. Protection of Permafrost Soils from Thawing by Increasing Herbivore Density. Sci Rep 2020; 10:4170. [PMID: 32184407 PMCID: PMC7078274 DOI: 10.1038/s41598-020-60938-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Accepted: 02/14/2020] [Indexed: 11/09/2022] Open
Abstract
Climate change will cause a substantial future greenhouse gas release from warming and thawing permafrost-affected soils to the atmosphere enabling a positive feedback mechanism. Increasing the population density of big herbivores in northern high-latitude ecosystems will increase snow density and hence decrease the insulation strength of snow during winter. As a consequence, theoretically 80% of current permafrost-affected soils (<10 m) is projected to remain until 2100 even when assuming a strong warming using the Representative Concentration Pathway 8.5. Importantly, permafrost temperature is estimated to remain below -4 °C on average after increasing herbivore population density. Such ecosystem management practices would be therefore theoretically an important additional climate change mitigation strategy. Our results also highlight the importance of new field experiments and observations, and the integration of fauna dynamics into complex Earth System models, in order to reliably project future ecosystem functions and climate.
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Affiliation(s)
- Christian Beer
- Department of Environmental Science and Analytical Chemistry, Stockholm University, Stockholm, Sweden. .,Bolin Centre for Climate Research, Stockholm University, Stockholm, Sweden. .,Institute of Soil Science, Department of Earth Sciences, Faculty of Mathematics, Informatics and Natural Sciences, Universität Hamburg, Hamburg, Germany. .,Center for Earth System Research and Sustainability, Universität Hamburg, Hamburg, Germany.
| | - Nikita Zimov
- North-East Scientific Station, Pacific Institute for Geography, Far-East Branch, Russian Academy of Sciences, Cherskii, Russia
| | - Johan Olofsson
- Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
| | - Philipp Porada
- Department of Environmental Science and Analytical Chemistry, Stockholm University, Stockholm, Sweden.,Bolin Centre for Climate Research, Stockholm University, Stockholm, Sweden.,Institute of Plant Science and Microbiology, Department of Biology, Faculty of Mathematics, Informatics and Natural Sciences, Universität Hamburg, Hamburg, Germany.,Center for Earth System Research and Sustainability, Universität Hamburg, Hamburg, Germany
| | - Sergey Zimov
- North-East Scientific Station, Pacific Institute for Geography, Far-East Branch, Russian Academy of Sciences, Cherskii, Russia
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Porada P, Lenton TM, Pohl A, Weber B, Mander L, Donnadieu Y, Beer C, Pöschl U, Kleidon A. High potential for weathering and climate effects of non-vascular vegetation in the Late Ordovician. Nat Commun 2016; 7:12113. [PMID: 27385026 PMCID: PMC4941054 DOI: 10.1038/ncomms12113] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2015] [Accepted: 06/01/2016] [Indexed: 12/27/2022] Open
Abstract
It has been hypothesized that predecessors of today's bryophytes significantly increased global chemical weathering in the Late Ordovician, thus reducing atmospheric CO2 concentration and contributing to climate cooling and an interval of glaciations. Studies that try to quantify the enhancement of weathering by non-vascular vegetation, however, are usually limited to small areas and low numbers of species, which hampers extrapolating to the global scale and to past climatic conditions. Here we present a spatially explicit modelling approach to simulate global weathering by non-vascular vegetation in the Late Ordovician. We estimate a potential global weathering flux of 2.8 (km3 rock) yr−1, defined here as volume of primary minerals affected by chemical transformation. This is around three times larger than today's global chemical weathering flux. Moreover, we find that simulated weathering is highly sensitive to atmospheric CO2 concentration. This implies a strong negative feedback between weathering by non-vascular vegetation and Ordovician climate. Early non-vascular vegetation may have caused an interval of glaciations in the Late Ordovician by enhancing global chemical weathering. Here, by simulating the organisms with a spatially explicit, process-based model, the authors propose that Ordovician vegetation had a high potential for chemical weathering.
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Affiliation(s)
- P Porada
- Department of Environmental Science and Analytical Chemistry (ACES), Stockholm University, 10691 Stockholm, Sweden.,Bolin Centre for Climate Research, Stockholm University, 10691 Stockholm, Sweden
| | - T M Lenton
- Earth System Science Group, College of Life and Environmental Sciences, University of Exeter, Laver Building (Level 7), North Park Road, Exeter EX4 4QE, UK
| | - A Pohl
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, F-91191 Gif-sur-Yvette, France
| | - B Weber
- Max Planck Institute for Chemistry, PO Box 3060, 55020 Mainz, Germany
| | - L Mander
- Department of Environment, Earth and Ecosystems, The Open University, Milton Keynes, Buckinghamshire MK7 6AA, UK
| | - Y Donnadieu
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, F-91191 Gif-sur-Yvette, France.,Aix-Marseille Université, CNRS, IRD, CEREGE UM34, 13545 Aix en Provence, France
| | - C Beer
- Department of Environmental Science and Analytical Chemistry (ACES), Stockholm University, 10691 Stockholm, Sweden.,Bolin Centre for Climate Research, Stockholm University, 10691 Stockholm, Sweden
| | - U Pöschl
- Max Planck Institute for Chemistry, PO Box 3060, 55020 Mainz, Germany
| | - A Kleidon
- Max Planck Institute for Biogeochemistry, PO Box 10 01 64, 07701 Jena, Germany
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Brück W, Porada P, Poser S, Rieckmann P, Hanefeld F, Kretzschmar HA, Lassmann H. Monocyte/macrophage differentiation in early multiple sclerosis lesions. Ann Neurol 1995; 38:788-96. [PMID: 7486871 DOI: 10.1002/ana.410380514] [Citation(s) in RCA: 346] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Monocyte/macrophage differentiation was studied in biopsy samples of multiple sclerosis (MS) lesions obtained in the early course of the disease. Macrophages were identified by immunocytochemistry using a panel of antibodies recognizing different macrophage-activation antigens. The number of cells stained with each antibody was related to the demyelinating activity of the lesions as detected by the presence of myelin degradation products. The pan-macrophage marker Ki-M1P revealed the highest numbers of macrophages in early and late active lesions. Lower numbers were encountered in inactive, demyelinated, or remyelinated lesions. The acute stage inflammatory macrophage markers MRP14 and 27E10 were expressed in either only early active (MRP14) or early and late active (27E10) lesions, thus allowing the identification of actively demyelinating lesions. The chronic stage inflammatory macrophage marker 25F9, in contrast, showed increasing expression with decreasing lesional activity. These findings indicate a differentiated pattern of macrophage activation in MS lesions and allow the staging of demyelinating lesions in routinely fixed and paraffin-embedded tissue.
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Affiliation(s)
- W Brück
- Department of Neuropathology, University of Göttingen, Germany
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