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Bogdanov AS, Maltsev AN, Kotenkova EV, Malikov VG, Lissovsky AA, Stakheev VV, Darvish J, Castiglia R. [Variability of Fragments of Nuclear Brca1 Gene, Exon 11, and Mitochondrial Cox1 Gene in House Mice Mus musculus]. Mol Biol (Mosk) 2020; 54:212-223. [PMID: 32392190 DOI: 10.31857/s0026898420020020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Accepted: 10/07/2019] [Indexed: 11/24/2022]
Abstract
To clarify genetic differences between subspecies of the house mouse Mus musculus, their distribution, and hybridization, we first conducted a comparative analysis of variability of nucleotide sequences of fragments of the nuclear gene Brca1, exon 11 (2331 bp), and mitochondrial gene Cox1 (1260 bp) in 40 house mice from West and East Europe, Transcaucasia, Siberia, and Central and South Asia. Brca1 genotypes were divided into five main groups, which differed in a number of fixed substitutions. Genotypes of each group are characteristic for the certain geographical region and the following subspecies: M. m. musculus, M. m. domesticus, M. m. castaneus, and M. m. wagneri together with M. m. gansuensis; a fifth group corresponds to an unidentified subspecies or a distinct genetic form of M. musculus from India (Sikkim State). Besides the homozygous specimens, we revealed mice, which were heterozygous for all diagnostic loci simultaneously; these specimens were determined as hybrid. Hybrid mice were mainly found in the zones of contact of subspecies, but in some cases, quite far from one of the parent subspecies (possibly, due to transportation). In two hybrid mice (from Bakhtiari Province of Iran and Transbaikalia of Russia), unique Brca1 haplotypes were detected. It cannot be ruled out that, at least partly, they may be characteristic of the M. m. bactrianus and M. m. gansuensis subspecies, respectively. Thus, the results of the study showed that the nuclear Brca1 gene is a promising molecular genetic marker for the analysis of variability, differentiation, and hybridization of house mice as well for subspecific identification of M. musculus specimens. Despite more rapid evolution of the Cox1 gene, it is not well suited for discrimination of M. m. musculus, M. m. wagneri, M. m. gansuensis specimens and Transcaucasian representatives of M. m. domesticus due to introgression and long-term maintenance of foreign mitochondrial DNA in populations. However, Cox1 gene analysis (along with the diagnostics of animals by nuclear DNA) may be useful for estimation of population differences in M. m. castaneus and M. m. domesticus subspecies.
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Affiliation(s)
- A S Bogdanov
- Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, 119334 Russia.,
| | - A N Maltsev
- Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, Moscow, 119071 Russia
| | - E V Kotenkova
- Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, Moscow, 119071 Russia
| | - V G Malikov
- Zoological Institute, Russian Academy of Sciences, St. Petersburg, 199034 Russia
| | - A A Lissovsky
- Zoological Museum, Moscow State University, Moscow, 125009 Russia
| | - V V Stakheev
- Southern Scientific Center, Russian Academy of Sciences, Rostov-on-Don, 344006 Russia
| | - J Darvish
- Ferdowsi University of Mashhad, Mashhad, 9177948974 Iran
| | - R Castiglia
- Università degli Studi di Roma "La Sapienza", Rome, 00161 Italy
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Bogdanov AS, Maltsev AN, Kotenkova EV, Malikov VG, Lissovsky AA, Stakheev VV, Darvish J, Castiglia R. Variability of Fragments of Nuclear Brca1 Gene, Exon 11, and Mitochondrial Cox1 Gene in House Mice Mus musculus. Mol Biol 2020. [DOI: 10.1134/s0026893320020028] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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Senczuk G, Castiglia R, Colangelo P, Delaugerre M, Corti C. The role of island physiography in maintaining genetic diversity in the endemic Tyrrhenian wall lizard (
Podarcis tiliguerta
). J Zool (1987) 2019. [DOI: 10.1111/jzo.12705] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- G. Senczuk
- Sezione di Zoologia “La Specola” Museo di Storia Naturale dell'Università di Firenze Firenze Italia
- Dipartimento di Biologia e Biotecnologie “Charles Darwin” Università di Roma “La Sapienza” Rome Italia
| | - R. Castiglia
- Dipartimento di Biologia e Biotecnologie “Charles Darwin” Università di Roma “La Sapienza” Rome Italia
| | - P. Colangelo
- Istituto di Ricerca sugli Ecosistemi Terrestri (CNR‐IRET) Consiglio Nazionale delle Ricerche Rome Italia
| | | | - C. Corti
- Sezione di Zoologia “La Specola” Museo di Storia Naturale dell'Università di Firenze Firenze Italia
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Mortelliti A, Castiglia R, Amori G, Maryanto I, Musser GG. A new species ofMargaretamys(Rodentia: Muridae: Murinae: Rattini) from Pegunungan Mekongga, southeastern Sulawesi, Indonesia. Tropical Zoology 2012. [DOI: 10.1080/03946975.2012.696439] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Gornung E, Castiglia R, Rovatsos M, Marchal JA, Díaz de la Guardia-Quiles R, Sanchez A. Comparative cytogenetic study of two sister species of Iberian ground voles, Microtus (Terricola) duodecimcostatus and M. (T.) lusitanicus (rodentia, cricetidae). Cytogenet Genome Res 2010; 132:144-50. [PMID: 21042006 DOI: 10.1159/000321572] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/09/2010] [Indexed: 11/19/2022] Open
Abstract
The two Iberian species of pine voles, Microtus (Terricola) duodecimcostatus and M. (T.) lusitanicus of the subfamily Arvicolinae (Cricetidae, Rodentia), were compared after G- and C-banding and chromosomal mapping of ribosomal RNA genes (rDNA), telomeric repeats, and satellite DNA Msat-160. Notwithstanding their close relationship (one sister group in phylogenetic analyses) and sharing of the diploid and fundamental chromosome numbers, the 2 species show notable differences in the sex chromosome morphology, the number and distribution of rDNA sites, constitutive heterochromatin and satDNA patterns. The only telomeric repeats showed normal, all-telomeric, distribution in karyotypes of both species. The data are discussed with regard to interspecific and intrageneric variation of the analyzed characters and the chromosomal evolution in the genus Microtus.
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Affiliation(s)
- E Gornung
- Department of Animal and Human Biology, University of Rome 'Sapienza', Rome, Italy.
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Castiglia R, Annesi F, Kryštufek B, Filippucci MG, Amori G. The evolutionary history of a mammal species with a highly fragmented range: the phylogeography of the European snow vole. J Zool (1987) 2009. [DOI: 10.1111/j.1469-7998.2009.00612.x] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Gornung E, Volleth M, Capanna E, Castiglia R. Comparative cytogenetics of moles (Eulipotyphla, Talpidae): chromosomal differences in Talpa romana and T. europaea. Cytogenet Genome Res 2008; 121:249-54. [DOI: 10.1159/000138892] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/07/2008] [Indexed: 11/19/2022] Open
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Franchini P, Castiglia R, Capanna E. Reproductive isolation between chromosomal races of the house mouse Mus musculus domesticus in a parapatric contact area revealed by an analysis of multiple unlinked loci. J Evol Biol 2008; 21:502-13. [PMID: 18205781 DOI: 10.1111/j.1420-9101.2007.01492.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The house mouse, Mus musculus domesticus, exhibits a high level of chromosomal polymorphism because of the occurrence and fast fixation of Robertsonian fusions between telocentric chromosomes. For this reason, it has been considered a classical speciation model to analyse the role of the chromosomal changes in reproductive isolation. In this study, we analysed a parapatric contact area between two metacentric races in central Italy, the Cittaducale race (CD: 2n = 22) and the Ancarano race (ACR: 2n = 24), to estimate gene flow at the boundary. Hybrids between these two races show high levels of structural heterozygosity and are expected to be highly infertile. A sample of 88 mice from 14 sites was used. The mice were genotyped by means of eight microsatellite loci mapped in four different autosomal arms. The results show clear genetic differentiation between the CD and ACR races, as revealed by differences in allele frequencies, factorial correspondence analysis and indexes of genetic population (e.g. F(ST) and R(ST)) along the contact zone. The genetic differentiation between the races was further highlighted by assignation and clustering analyses, in which all the individuals were correctly assigned by their genotypes to the source chromosomal race. This result is particularly interesting in view of the absence of any geographical or ecological barrier in the parapatric contact zone, which occurs within a village. In these conditions, the observed genetic separation suggests an absence of gene flow between the races. The CD-ACR contact area is a rare example of a final stage of speciation between chromosomal races of rodents because of their chromosomal incompatibility.
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Affiliation(s)
- P Franchini
- Dipartimento di Biologia Animale e dell'Uomo, University of Rome La Sapienza, Rome, Italy.
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Castiglia R, Annesi F, Aloise G, Amori G. Mitochondrial DNA reveals different phylogeographic structures in the water shrews Neomys anomalus and N. fodiens (Insectivora: Soricidae) in Europe. J ZOOL SYST EVOL RES 2007. [DOI: 10.1111/j.1439-0469.2006.00391.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Castiglia R, Bekele A, Makundi R, Oguge N, Corti M. Chromosomal diversity in the genus Arvicanthis (Rodentia, Muridae) from East Africa: a taxonomic and phylogenetic evaluation. J ZOOL SYST EVOL RES 2006. [DOI: 10.1111/j.1439-0469.2006.00356.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Aloise G, Amori G, Cagnin M, Castiglia R. New European southern distribution limit of Neomys fodiens (Pennant, 1771) (Insectivora, Soricidae). Mamm Biol 2005. [DOI: 10.1016/j.mambio.2005.04.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Abstract
Thirty years after its identification, the model of chromosomal speciation in Mus musculus domesticus is reevaluated using the methods of population biology, molecular cytogenetics and functional genomics. Three main points are considered: (1) the structural predisposition of M. m. domesticus chromosomes to Robertsonian fusion; (2) the impediment of structural heterozygosity to gene flow between populations of mice with karyotypes rearranged by Robertsonian fusion and between them and populations with the standard all-acrocentric 40-chromosome karyotype; (3) the selective advantage of chromosomal novelty, essential for the attainment of homozygosis and the rapid fixation of the new karyotype in the population.
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Affiliation(s)
- E Capanna
- Dipartimento di Biologia animale e dell'Uomo, Università di Roma La Sapienza, Roma, Italy.
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Castiglia R, Corti M, Tesha P, Scanzani A, Fadda C, Capanna E, Verheyen W. Cytogenetics of the genus Arvicanthis (Rodentia, Muridae). 3. Comparative cytogenetics of A. neumanni and A. nairobae from Tanzania. Genetica 2003; 118:33-9. [PMID: 12733662 DOI: 10.1023/a:1022903112274] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The African rats of the genus Arvicanthis have been widely studied during recent years to clarify species boundaries and phylogenetic relationships. The wide chromosomal variability of the genus has been highlighted in several studies, with each accepted species characterised by its individual karyotypes and others being revealed as cryptic species. In the present paper we report the karyotype and the C- and G-banding patterns of the two species A. nairobae and A. neumanni from seven localities of Tanzania, an area of the range poorly studied. The two karyotypes were compared to that of A. niloticus, which is considered to be primitive. The karyotype of A. neumanni is characterised by 2n = 53-54 and NFa = 62. This karyotypic variability depends on a widespread Robertsonian polymorphism. The karyotype of A. nairobae shows 2n = 62 and NFa = 78; it diverges from that of A. niloticus through one reciprocal translocation, five inversions and three heterochromatic additions. The comparison with the karyotypes of other species of the genus showed that A. neumanni belongs to the east African lineage (with A. abyssinicus, A. blicki, A. niloticus), while A. nairobae is closer to the central and the west African representatives which were all previously under the name of A. niloticus (ANI-2, ANI-3, ANI-4). The distribution of A. nairobae in east Africa opens new scenarios in the biogeographical pattern of evolution of the genus.
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Affiliation(s)
- R Castiglia
- Dipartimento di Biologia Animale e dell'Uomo, Università di Roma 'La Sapienza', Via A. Borelli 50, 00161 Roma, Italy
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Volobouev VT, Ducroz JF, Aniskin VM, Britton-Davidian J, Castiglia R, Dobigny G, Granjon L, Lombard M, Corti M, Sicard B, Capanna E. Chromosomal characterization of Arvicanthis species (Rodentia, Murinae) from western and central Africa: implications for taxonomy. Cytogenet Genome Res 2003; 96:250-60. [PMID: 12438807 DOI: 10.1159/000063041] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
A chromosome study of unstriped grass rats of the genus Arvicanthis (Rodentia, Murinae) in western and central Africa is presented. The observations extend the data available to 242 specimens from 59 localities. All individuals karyotyped belong to four karyotypic forms, or cytotypes, earlier described as ANI-1, ANI-2, ANI-3, and ANI-4 and are presumed to correspond to four distinct species. In order to provide diagnostic characters for these western and one central African Arvicanthis species, we standardized the chromosomal data available and developed a G- and C-banded chromosome nomenclature that allows easy species identification. Each form is characterized by a distinct geographical distribution, roughly following the biogeographical domains of western Africa, although their precise limits remain to be assessed. The sole area of sympatry detected is the region of the inner delta of the Niger River, where both ANI-1 and ANI-3 can be found. It is proposed that the three western African species ANI-1, ANI-3, and ANI-4 be renamed as A. niloticus, A. ansorgei, and A. rufinus, respectively.
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Affiliation(s)
- V T Volobouev
- Laboratoire Mammifères et Oiseaux, Muséum National d'Histoire Naturelle, Paris, France.
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Castiglia R, Fadda C, Corti M, Scanzani A, Verheyen W, Capanna E. Chromosomal evolution in the African Arvicanthine rats (Murinae, Rodentia): comparative cytogenetics of Lemniscomys (L. zebra, L. rosalia, L. striatus) and Arvicanthis dembeensis. J ZOOL SYST EVOL RES 2002. [DOI: 10.1046/j.1439-0469.2002.00185.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Castiglia R, Annesi F, Capanna E. Contact zones between chromosomal races of Mus musculus domesticus. 3. Molecular and chromosomal evidence of restricted gene flow between the CD race (2n = 22) and the ACR race (2n = 24). Heredity (Edinb) 2002; 89:219-24. [PMID: 12209393 DOI: 10.1038/sj.hdy.6800129] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2002] [Accepted: 06/18/2002] [Indexed: 11/09/2022] Open
Abstract
The contact zone between the Ancarano (ACR; 2n = 24) and Cittaducale (CD; 2n = 22) races of Mus musculus domesticus was studied. We used chromosomes and mitochondrial DNA (mtDNA) sequences of the control region as genetic markers to detect introgression between races. In total, 76 mice were trapped at 17 localities. Cytogenetic analysis was performed on 73 mice. A segment of the control region (468 bp) was sequenced in 41 specimens. The two races are distributed parapatrically and the contact zone was identified inside a village (Pizzoli). No mixed population was found in the study area. The contact zone does not correspond to any geographical or ecological barrier but is located in a zone of potentially high density of mice. The sequence analysis clearly demonstrates genetic differentiation between races (1.4% of sequence divergence). Hybridization is rare. Evidence of introgression was found in two individuals in the contact zone: one individual of the ACR race carries a metacentric belonging to the CD race, while another ACR individual carries a CD-like haplotype. In these ecological conditions, the observed distribution pattern and the very low level of hybridization suggest the presence of a premating mechanism of reproductive isolation.
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Affiliation(s)
- R Castiglia
- Dipartimento di Biologia Animale e dell' Uomo, Università di Roma La Sapienza- Via A. Borelli 50, 00161 Roma, Italy.
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Castiglia R, Capanna E. Contact zone between chromosomal races of Mus musculus domesticus. 2. Fertility and segregation in laboratory-reared and wild mice heterozygous for multiple robertsonian rearrangements. Heredity (Edinb) 2000; 85 ( Pt 2):147-56. [PMID: 11012717 DOI: 10.1046/j.1365-2540.2000.00743.x] [Citation(s) in RCA: 57] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Litter size, anaphase I nondisjunction and X-Y dissociation at metaphase I were studied in homozygous and heterozygous house mice from a central Italian chromosomal hybrid zone between the CD (2n=22) race and the standard race (2n=40). We also observed the segregation of the two chromosomal forms (Robertsonian and non-Robertsonian) in male and female multiple heterozygotes from the karyotype of their offspring and chromosomal arm counts of metaphase II. Litter size was significantly reduced in the F1 hybrids, but there was no difference in litter size between male and female F1s. Fertility in wild mice decreased with increasing numbers of structural heterozygosities (0-5). Some metacentrics appear to be under meiotic drive but there was no rule as to which of the two forms was favoured in backcrosses. An original observation of a negative correlation between the length of metacentrics and transmission rate was described in hybrids. Slight cosegregation of chromosomes with a similar morphology was present in the progeny of males and females. These observations are discussed in relation to the stability of this hybrid zone through time.
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Affiliation(s)
- R Castiglia
- Dipartimento di Biologia Animale e dell' Uomo, Università di Roma 'La Sapienza'-Via A. Borelli 50, 00161 Rome, Italy.
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Aglianó AM, Santangelo C, Silvestri I, Gazzaniga P, Giuliani L, Naso G, Frati L, Castiglia R. On chromosomal instability: what is the karyotype of your 32D CI3 cell line. Blood 2000; 95:3636-7. [PMID: 10877550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023] Open
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Affiliation(s)
- R Castiglia
- Dipartimento de Biologia Animale e dell'Uomo, Università di Roma La Sapienza, Italy
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Castiglia R, Capanna E. Contact zones between chromosomal races of Mus musculus domesticus. 1. Temporal analysis of a hybrid zone between the CD chromosomal race (2n=22) and populations with the standard karyotype. Heredity (Edinb) 1999; 83 ( Pt 3):319-26. [PMID: 10504430 DOI: 10.1038/sj.hdy.6885820] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
A temporal analysis of a hybrid zone between chromosomal races of Mus musculus domesticus was performed to evaluate its dynamics over a 20-year period. The transect chosen was one previously analysed by Spirito et al. (1980) across the hycbrid zone between the chromosomal race CD 2n=22 (central Italy) and the surrounding populations with standard karyotype (2n=40). The results show that 20 years of hybridization have not had any significant effect on the position of this hybrid zone, nor on the location of its extreme margin, except for one site for which passive transport of mice may have been important. The absence of a significant shift of the tension zone excludes a possible imbalance between the two cytotypes; a fitness superiority of one homozygote greater than 0.01 would have produced an appreciable shift of the zone. The internal chromosomal structure of the zone shows a constant gradual increase in metacentric chromosome frequency towards the localities nearest the area inhabited by the 22-CD homozygote population. This contrasts with the previously reported data which indicated an irregular trend, particularly evident for the Rb(3.8), Rb(5.17) and Rb(6.13) chromosomes. For each Rb metacentric, we observed greater values of FST in the past sample than in the present one. These differences reveal a tendency towards the homogenization of adjacent populations, perhaps because of greater migration between adjacent demes resulting from increased commercial traffic. The Mantel test was performed for both temporal samples. A positive correlation between the geographical and chromosomal differentiation was demonstrated.
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Affiliation(s)
- R Castiglia
- Dipartimento di Biologia Animale e dell'Uomo, Università di Roma 'La Sapienza', Via A. Borelli 50, 00161 Roma, Italy.
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