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Yasin NM, Pancho F, Yasin M, Van Impe JFM, Akkermans S. Novel methods to monitor the biodegradation of polylactic acid (PLA) by Amycolatopsis orientalis and Amycolatopsis thailandensis. Front Bioeng Biotechnol 2024;12:1355050. [PMID: 38655392 PMCID: PMC11035760 DOI: 10.3389/fbioe.2024.1355050] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Accepted: 03/25/2024] [Indexed: 04/26/2024]  Open
2
Joseph JA, Akkermans S, Van Impe JF. Macroscopic modeling of the growth and substrate consumption of wild type and genetically modified Pichia pastoris. Biotechnol J 2023;18:e2300164. [PMID: 37688402 DOI: 10.1002/biot.202300164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2023] [Revised: 08/15/2023] [Accepted: 08/31/2023] [Indexed: 09/10/2023]
3
Akritidou T, Akkermans S, Smet C, Gaspari S, Sharma C, Matthews E, Van Impe JFM. Gut microbiota of the small intestine as an antimicrobial barrier against foodborne pathogens: Impact of diet on the survival of S. Typhimurium and L. monocytogenes during in vitro digestion. Food Res Int 2023;173:113292. [PMID: 37803689 DOI: 10.1016/j.foodres.2023.113292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 07/14/2023] [Accepted: 07/16/2023] [Indexed: 10/08/2023]
4
Akritidou T, Akkermans S, Smet C, Delens V, Van Impe JFM. Effect of food structure and buffering capacity on pathogen survival during in vitro digestion. Food Res Int 2023;164:112305. [PMID: 36737908 DOI: 10.1016/j.foodres.2022.112305] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Revised: 12/02/2022] [Accepted: 12/03/2022] [Indexed: 12/23/2022]
5
Joseph JA, Akkermans S, Tsakali E, Van Impe JF. Determination of Recombinant Thaumatin II secreted by Pichia pastoris using Reversed-phase High-Performance Liquid Chromatography. Food and Bioproducts Processing 2022. [DOI: 10.1016/j.fbp.2022.10.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Mat Yasin N, Akkermans S, Van Impe JFM. Enhancing the biodegradation of (bio)plastic through pretreatments: A critical review. Waste Manag 2022;150:1-12. [PMID: 35780576 DOI: 10.1016/j.wasman.2022.06.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 06/02/2022] [Accepted: 06/06/2022] [Indexed: 06/15/2023]
7
Katsini L, Bhonsale S, Akkermans S, Roufou S, Griffin S, Valdramidis V, Misiou O, Koutsoumanis K, Muñoz López CA, Polanska M, Van Impe JF. Quantitative methods to predict the effect of climate change on microbial food safety: A needs analysis. Trends Food Sci Technol 2022. [DOI: 10.1016/j.tifs.2021.07.041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
8
Joseph J, Akkermans S, Van Impe JFM. Processing Method for the Quantification of Methanol and Ethanol from Bioreactor Samples Using Gas Chromatography-Flame Ionization Detection. ACS Omega 2022;7:24121-24133. [PMID: 35874265 PMCID: PMC9301692 DOI: 10.1021/acsomega.2c00055] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
9
Akritidou T, Smet C, Akkermans S, Tonti M, Williams J, Van de Wiele T, Van Impe JFM. A protocol for the cultivation and monitoring of ileal gut microbiota surrogates. J Appl Microbiol 2022;133:1919-1939. [PMID: 35751580 DOI: 10.1111/jam.15684] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Revised: 06/10/2022] [Accepted: 06/21/2022] [Indexed: 11/28/2022]
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Akkermans S, Van Impe JFM. An Accurate Method for Studying Individual Microbial Lag: Experiments and Computations. Front Microbiol 2021;12:725499. [PMID: 34803943 PMCID: PMC8600314 DOI: 10.3389/fmicb.2021.725499] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 10/15/2021] [Indexed: 11/13/2022]  Open
11
Angarano V, Akkermans S, Smet C, Chieffi A, Van Impe JF. The potential of violet, blue, green and red light for the inactivation of P. fluorescens as planktonic cells, individual cells on a surface and biofilms. Food and Bioproducts Processing 2020. [DOI: 10.1016/j.fbp.2020.07.019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
12
Angarano V, Smet C, Akkermans S, Watt C, Chieffi A, Van Impe JF. Visible Light as an Antimicrobial Strategy for Inactivation of Pseudomonas fluorescens and Staphylococcus epidermidis Biofilms. Antibiotics (Basel) 2020;9:E171. [PMID: 32290162 PMCID: PMC7235755 DOI: 10.3390/antibiotics9040171] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Revised: 04/06/2020] [Accepted: 04/07/2020] [Indexed: 12/13/2022]  Open
13
Verheyen D, Baka M, Akkermans S, Skåra T, Van Impe JF. Effect of microstructure and initial cell conditions on thermal inactivation kinetics and sublethal injury of Listeria monocytogenes in fish-based food model systems. Food Microbiol 2019;84:103267. [DOI: 10.1016/j.fm.2019.103267] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Revised: 05/22/2019] [Accepted: 07/10/2019] [Indexed: 01/07/2023]
14
Joseph JA, Akkermans S, Nimmegeers P, Van Impe JFM. Bioproduction of the Recombinant Sweet Protein Thaumatin: Current State of the Art and Perspectives. Front Microbiol 2019;10:695. [PMID: 31024485 PMCID: PMC6463758 DOI: 10.3389/fmicb.2019.00695] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2018] [Accepted: 03/19/2019] [Indexed: 12/12/2022]  Open
15
Tack ILMM, Nimmegeers P, Akkermans S, Logist F, Van Impe JFM. A low-complexity metabolic network model for the respiratory and fermentative metabolism of Escherichia coli. PLoS One 2018;13:e0202565. [PMID: 30157229 PMCID: PMC6114798 DOI: 10.1371/journal.pone.0202565] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2018] [Accepted: 08/06/2018] [Indexed: 01/01/2023]  Open
16
Tango CN, Akkermans S, Hussain MS, Khan I, Van Impe J, Jin YG, Oh DH. Modeling the effect of pH, water activity, and ethanol concentration on biofilm formation of Staphylococcus aureus. Food Microbiol 2018;76:287-295. [PMID: 30166152 DOI: 10.1016/j.fm.2018.06.006] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Revised: 04/18/2018] [Accepted: 06/11/2018] [Indexed: 10/14/2022]
17
Akkermans S, Nimmegeers P, Van Impe JF. A tutorial on uncertainty propagation techniques for predictive microbiology models: A critical analysis of state-of-the-art techniques. Int J Food Microbiol 2018;282:1-8. [PMID: 29885972 DOI: 10.1016/j.ijfoodmicro.2018.05.027] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2017] [Revised: 04/19/2018] [Accepted: 05/27/2018] [Indexed: 10/16/2022]
18
Santos JLPD, Samapundo S, Biyikli A, Van Impe J, Akkermans S, Höfte M, Abatih EN, Sant'Ana AS, Devlieghere F. Occurrence, distribution and contamination levels of heat-resistant moulds throughout the processing of pasteurized high-acid fruit products. Int J Food Microbiol 2018;281:72-81. [PMID: 29870893 DOI: 10.1016/j.ijfoodmicro.2018.05.019] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Revised: 05/08/2018] [Accepted: 05/18/2018] [Indexed: 11/29/2022]
19
Akkermans S, Van Impe JF. Mechanistic modelling of the inhibitory effect of pH on microbial growth. Food Microbiol 2017;72:214-219. [PMID: 29407400 DOI: 10.1016/j.fm.2017.12.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Revised: 12/14/2017] [Accepted: 12/15/2017] [Indexed: 10/18/2022]
20
Tack ILMM, Nimmegeers P, Akkermans S, Hashem I, Van Impe JFM. Simulation of Escherichia coli Dynamics in Biofilms and Submerged Colonies with an Individual-Based Model Including Metabolic Network Information. Front Microbiol 2017;8:2509. [PMID: 29321772 PMCID: PMC5733555 DOI: 10.3389/fmicb.2017.02509] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Accepted: 12/01/2017] [Indexed: 11/13/2022]  Open
21
Akkermans S, Logist F, Van Impe JF. An interaction model for the combined effect of temperature, pH and water activity on the growth rate of E. coli K12. Food Res Int 2017;106:1123-1131. [PMID: 29579907 DOI: 10.1016/j.foodres.2017.11.026] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Revised: 10/31/2017] [Accepted: 11/19/2017] [Indexed: 11/15/2022]
22
Vercammen D, Telen D, Nimmegeers P, Janssens A, Akkermans S, Noriega Fernandez E, Logist F, Van Impe J. Application of a dynamic metabolic flux algorithm during a temperature-induced lag phase. Food and Bioproducts Processing 2017. [DOI: 10.1016/j.fbp.2016.10.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
23
Akkermans S, Noriega Fernandez E, Logist F, Van Impe JF. Introducing a novel interaction model structure for the combined effect of temperature and pH on the microbial growth rate. Int J Food Microbiol 2016;240:85-96. [PMID: 27393390 DOI: 10.1016/j.ijfoodmicro.2016.06.011] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2016] [Revised: 05/27/2016] [Accepted: 06/11/2016] [Indexed: 01/25/2023]
24
Stamati I, Logist F, Akkermans S, Noriega Fernández E, Van Impe J. On the effect of sampling rate and experimental noise in the discrimination between microbial growth models in the suboptimal temperature range. Comput Chem Eng 2016. [DOI: 10.1016/j.compchemeng.2015.10.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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