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Arons MM, Barnes SR, Cheng R, Whittle K, Elsholz C, Bui D, Gilley S, Maldonado A, LaCross N, Sage K, Lewis N, McCaffrey K, Green J, Duncan J, Dunn AC. Examining the temporality of vitamin E acetate in illicit THC-containing e-cigarette, or vaping, products from a public health and law enforcement response to EVALI - Utah, 2018-2020. Int J Drug Policy 2020; 88:103026. [PMID: 33246266 DOI: 10.1016/j.drugpo.2020.103026] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Revised: 11/03/2020] [Accepted: 11/03/2020] [Indexed: 11/25/2022]
Abstract
BACKGROUND In the summer of 2019, e-cigarette, or vaping, product use-associated lung injury (EVALI) was detected in the United States. Multiple agencies reported illicit tetrahydrocannabinol (THC)-containing e-cigarette, or vaping, products containing vitamin E acetate (VEA) as a substance of concern. METHODS As an expansion of the Utah Department of Health's response to EVALI, the Utah Public Health Laboratory and the Utah Department of Public Safety screened 170 products from 96 seizures between October 2018 and January 2020. Using Pearson's correlation coefficient, we analyzed the temporal correlation of national, and Utah specific case counts, and the percentage of seizures indicating VEA by month. RESULTS The findings indicate strong and significant correlations between seizures indicating VEA and both the national (r = 0.70, p = 0.002) and Utah specific (r = 0.78, p < 0.001) case counts. CONCLUSION These findings underscore that VEA should not be added to e-cigarettes, or vaping, products and the importance of collaboration with law enforcement when responding to outbreaks associated with illicit substances.
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Affiliation(s)
- Melissa M Arons
- Epidemic Intelligence Service, Center for Surveillance, Epidemiology and Laboratory Services, Centers for Disease Control and Prevention; Division of Global HIV and Tuberculosis, Center for Global Health, Centers for Disease Control and Prevention, Atlanta Georgia
| | - Stephen R Barnes
- Utah Department of Health; National Foundation for the Centers for Disease Control and Prevention
| | | | | | - Christopher Elsholz
- State Bureau of Investigation, Major Crimes, Utah Department of Public Safety
| | - David Bui
- Epidemic Intelligence Service, Center for Surveillance, Epidemiology and Laboratory Services, Centers for Disease Control and Prevention; Division of Environmental Health Science and Practice, National Center for Environmental Health, Centers for Disease Control and Prevention, Atlanta Georgia
| | - Stephen Gilley
- Intelligence Division, Organized Crime, Utah Department of Public Safety
| | | | | | | | - Nathaniel Lewis
- Epidemic Intelligence Service, Center for Surveillance, Epidemiology and Laboratory Services, Centers for Disease Control and Prevention; Utah Department of Health
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Barnes SR, Ambrose JF, Maule AL, Kebisek J, McCabe AA, Scatliffe K, Forrest LJ, Steelman R, Superior M. Incidence, timing, and seasonal patterns of heat illnesses during U.S. Army basic combat training, 2014-2018. MSMR 2019; 26:7-14. [PMID: 31026172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Risk factors for heat illnesses (HIs) among new soldiers include exercise intensity, environmental conditions at the time of exercise, a high body mass index, and conducting initial entry training during hot and humid weather when recruits are not yet acclimated to physical exertion in heat. This study used data from the Defense Health Agency's-Weather-Related Injury Repository to calculate rates and to describe the incidence, timing, and geographic distribution of HIs among soldiers during U.S. Army basic combat training (BCT). From 2014 through 2018, HI events occurred in 1,210 trainees during BCT, resulting in an overall rate of 3.6 per 10,000 BCT person-weeks (p-wks) (95% CI: 3.4-3.8). HI rates (cases per 10,000 BCT p-wks) varied among the 4 Army BCT sites: Fort Benning, GA (6.8); Fort Jackson, SC (4.4); Fort Sill, OK (1.8); and Fort Leonard Wood, MO (1.7). Although the highest rates of HIs occurred at Fort Benning, recruits in all geographic areas were at risk. The highest rates of HI occurred during the peak training months of June through September, and over half of all HI cases affected soldiers during the first 3 weeks of BCT. Prevention of HI among BCT soldiers requires relevant training of both recruits and cadre as well as the implementation of effective preventive measures.
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Sekins KM, Barnes SR, Fan L, Hopple JD, Hsu SJ, Kook J, Lee CY, Maleke C, Zeng XJ, Moreau-Gobard R, Ahiekpor-Dravi A, Funka-Lea G, Eaton J, Wong K, Keneman S, Mitchell SB, Dunmire B, Kucewicz JC, Clubb FJ, Miller MW, Crum LA. Deep Bleeder Acoustic Coagulation (DBAC)-part II: in vivo testing of a research prototype system. J Ther Ultrasound 2015; 3:17. [PMID: 26413296 PMCID: PMC4582735 DOI: 10.1186/s40349-015-0038-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2015] [Accepted: 09/02/2015] [Indexed: 11/22/2022] Open
Abstract
Background Deep Bleeder Acoustic Coagulation (DBAC) is an ultrasound image-guided high-intensity focused ultrasound (HIFU) method proposed to automatically detect and localize (D&L) and treat deep, bleeding, combat wounds in the limbs of soldiers. A prototype DBAC system consisting of an applicator and control unit was developed for testing on animals. To enhance control, and thus safety, of the ultimate human DBAC autonomous product system, a thermal coagulation strategy that minimized cavitation, boiling, and non-linear behaviors was used. Material and methods The in vivo DBAC applicator design had four therapy tiles (Tx) and two 3D (volume) imaging probes (Ix) and was configured to be compatible with a porcine limb bleeder model developed in this research. The DBAC applicator was evaluated under quantitative test conditions (e.g., bleeder depths, flow rates, treatment time limits, and dose exposure time limits) in an in vivo study (final exam) comprising 12 bleeder treatments in three swine. To quantify blood flow rates, the “bleeder” targets were intact arterial branches, i.e., the superficial femoral artery (SFA) and a deep femoral artery (DFA). D&L identified, characterized, and targeted bleeders. The therapy sequence selected Tx arrays and determined the acoustic power and Tx beam steering, focus, and scan patterns. The user interface commands consisted of two buttons: “Start D&L” and “Start Therapy.” Targeting accuracy was assessed by necropsy and histologic exams and efficacy (vessel coagulative occlusion) by angiography and histology. Results The D&L process (Part I article, J Ther Ultrasound, 2015 (this issue)) executed fully in all cases in under 5 min and targeting evaluation showed 11 of 12 thermal lesions centered on the correct vessel subsection, with minimal damage to adjacent structures. The automated therapy sequence also executed properly, with select manual steps. Because the dose exposure time limit (tdose ≤ 30 s) was associated with nonefficacious treatment, 60-s dosing and dual-dosing was also pursued. Thrombogenic evidence (blood clotting) and collagen denaturation (vessel shrinkage) were found in necropsy and histologically in all targeted SFAs. Acute SFA reductions in blood flow (20–30 %) were achieved in one subject, and one partial and one complete vessel occlusion were confirmed angiographically. The complete occlusion case was achieved with a dual dose (90 s total exposure) with focal intensity ≈500 W/cm2 (spatial average, temporal average). Conclusions While not meeting all in vivo objectives, the overall performance of the DBAC applicator was positive. In particular, D&L automation workflow was verified during each of the tests, with processing times well under specified (10 min) limits, and all bleeder branches were detected and localized. Further, gross necropsy and tissue examination confirmed that the HIFU thermal lesions were coincident with the target vessel locations in over 90 % of the multi-array dosing treatments. The SFA/DFA bleeder models selected, and the protocols used, were the most suitable practical model options for the given DBAC anatomical and bleeder requirements. The animal models were imperfect in some challenging aspects, including requiring tissue-mimicking material (TMM) standoffs to achieve deep target depths, thereby introducing device-tissue motion, with resultant imaging artifacts. The model “bleeders” involved intact vessels, which are subject to less efficient heating and coagulation cascade behaviors than true puncture injuries.
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Affiliation(s)
- K Michael Sekins
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA ; 8808 Points Dr. N.E., Yarrow Point, WA 98004 USA
| | - Stephen R Barnes
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Liexiang Fan
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Jerry D Hopple
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Stephen J Hsu
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - John Kook
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Chi-Yin Lee
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Caroline Maleke
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Xiaozheng Jenny Zeng
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Romain Moreau-Gobard
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Alexis Ahiekpor-Dravi
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Gareth Funka-Lea
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - John Eaton
- ETN LLC, 1150 Guinda St., Palo Alto, CA 94301 USA
| | - Keith Wong
- ETN LLC, 1150 Guinda St., Palo Alto, CA 94301 USA
| | - Scott Keneman
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Stuart B Mitchell
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 013 NE 40th Street, Seattle, WA 98105-6698 USA
| | - Barbrina Dunmire
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 013 NE 40th Street, Seattle, WA 98105-6698 USA
| | - John C Kucewicz
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 013 NE 40th Street, Seattle, WA 98105-6698 USA
| | - Fred J Clubb
- Department of Veterinary Pathology, Texas A&M University, 4467 Veterinary Medical Science Building, College Station, TX 77843 USA
| | - Matthew W Miller
- Texas Institute for Preclinical Studies (TIPS), Texas A&M University, College Station, TX 77843 USA
| | - Lawrence A Crum
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 013 NE 40th Street, Seattle, WA 98105-6698 USA
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Sekins KM, Barnes SR, Fan L, Hopple JD, Hsu SJ, Kook J, Lee CY, Maleke C, Ramachandran AR, Zeng XJ, Moreau-Gobard R, Ahiekpor-Dravi A, Funka-Lea G, Mitchell SB, Dunmire B, Kucewicz JC, Eaton J, Wong K, Keneman S, Crum LA. Deep bleeder acoustic coagulation (DBAC)-Part I: development and in vitro testing of a research prototype cuff system. J Ther Ultrasound 2015; 3:16. [PMID: 26388994 PMCID: PMC4575471 DOI: 10.1186/s40349-015-0037-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2015] [Accepted: 09/02/2015] [Indexed: 12/03/2022] Open
Abstract
Background Bleeding from limb injuries is a leading cause of death on the battlefield, with deep wounds being least accessible. High-intensity focused ultrasound (HIFU) has been shown capable of coagulation of bleeding (cautery). This paper describes the development and refereed in vitro evaluation of an ultrasound (US) research prototype deep bleeder acoustic coagulation (DBAC) cuff system for evaluating the potential of DBAC in the battlefield. The device had to meet quantitative performance metrics on automated operation, therapeutic heating, bleeder detection, targeting accuracy, operational time limits, and cuff weight over a range of limb sizes and bleeder depths. These metrics drove innovative approaches in image segmentation, bleeder detection, therapy transducers, beam targeting, and dose monitoring. A companion (Part II) paper discusses the in vivo performance testing of an animal-specific DBAC system. Materials and methods The cuff system employed 3D US imaging probes (“Ix”) for detection and localization (D&L) and targeting, with the bleeders being identified by automated spectral Doppler analysis of flow waveforms. Unique high-element-count therapeutic arrays (“Tx”) were developed, with the final cuff prototype having 21 Tx’s and 6 Ix’s. Spatial registration of Ix’s and Tx’s was done with a combination of image-registration, acoustic time-of-flight measurement, and tracking of the cuff shape via a fiber optic sensor. Acoustic radiation force impulse (ARFI) imaging or thermal strain imaging (TSI) at low-power doses were used to track the HIFU foci in closed-loop targeting. Recurrent neural network (RNN) acoustic thermometry guided closed-loop dosing. The cuff was tested on three phantom “limb” sizes: diameters = 25, 15, and 7.5 cm, with bleeder depths from 3.75 to 12.5 cm. “Integrated Phantoms” (IntP) were used for assessing D&L, closed-loop targeting, and closed-loop dosing. IntPs had surrogate arteries and bleeders, with blood-mimicking fluids moved by a pulsatile pump, and thermocouples (TCs) on the bleeders. Acoustic dosing was developed and tested using “HIFU Phantoms” having precisely located TCs, with end-of-dose target ∆T = 33–58 °C, and skin temperature ∆T ≤ 20 °C, being required. Results Most DBAC cuff performance requirements were met, including cuff weight, power delivery, targeting accuracy, skin temperature limit, and autonomous operation. The automated D&L completed in 9 of 15 tests (65 %), detecting the smallest (0.6 mm) bleeders, but it had difficulty with the lowest flow (3 cm/sec) bleeders, and in localizing bleeders in the smallest (7.5 cm) phantoms. D&L did not complete within the 9-min limit (results ranged 10–21 min). Closed-loop targeting converged in 20 of 31 tests (71 %), and closed-loop dosing power shut-off at preset ∆Ts was operational. Summary and conclusion The main performance objectives of the prototype DBAC cuff were met, however the designs required a number of challenging new technology developments. The novel Tx arrays exhibited high power with significant beam steering and focusing flexibility, while their integrated electronics enabled the required compact, lightweight configurability and simplified driving controls and cable/connector architecture. The compounded 3D imaging, combined with sophisticated software algorithms, enabled automated D&L and initial targeting and closed-loop targeting feedback via TSI. The development of RNN acoustic thermometry made possible feedback-controlled dosing. The lightweight architecture required significant design and fabrication effort to meet mechanical functionalities. Although not all target specifications were met, future engineering solutions addressing these performance deficiencies are proposed. Lastly, the program required very complex limb test phantoms and, while very challenging to develop, they performed well.
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Affiliation(s)
- K Michael Sekins
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA ; Medical Device and Technology Development and Commercialization (concultancy) , 8808 Points Dr. N.E, Yarrow Point, WA 98004 USA
| | - Stephen R Barnes
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Liexiang Fan
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Jerry D Hopple
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Stephen J Hsu
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - John Kook
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Chi-Yin Lee
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Caroline Maleke
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - A R Ramachandran
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Xiaozheng Jenny Zeng
- Siemens Ultrasound Business Unit, 22010 S.E. 51st Street, Issaquah, WA 98029-1271 USA
| | - Romain Moreau-Gobard
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Alexis Ahiekpor-Dravi
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Gareth Funka-Lea
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Stuart B Mitchell
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 1013 NE 40th Street, Seattle, WA 98105-6698 USA
| | - Barbrina Dunmire
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 1013 NE 40th Street, Seattle, WA 98105-6698 USA
| | - John C Kucewicz
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 1013 NE 40th Street, Seattle, WA 98105-6698 USA
| | - John Eaton
- ETN LLC, 1150 Guinda St., Palo Alto, CA 94301 USA
| | - Keith Wong
- ETN LLC, 1150 Guinda St., Palo Alto, CA 94301 USA
| | - Scott Keneman
- Siemens Corporate Research and Technology, 755 College Road East, Princeton, NJ 08540 USA
| | - Lawrence A Crum
- Center for Industrial and Medical Ultrasound, Applied Physics Laboratory, University of Washington, 1013 NE 40th Street, Seattle, WA 98105-6698 USA
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Sun Z, Wang S, Barnes SR. Understanding congestion in China’s medical market: an incentive structure perspective. Health Policy Plan 2015; 31:390-403. [DOI: 10.1093/heapol/czv062] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/16/2015] [Indexed: 11/14/2022] Open
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Grierson CS, Barnes SR, Chase MW, Clarke M, Grierson D, Edwards KJ, Jellis GJ, Jones JD, Knapp S, Oldroyd G, Poppy G, Temple P, Williams R, Bastow R. One hundred important questions facing plant science research. New Phytol 2011; 192:6-12. [PMID: 21883238 DOI: 10.1111/j.1469-8137.2011.03859.x] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Affiliation(s)
- C S Grierson
- School of Biological Sciences, University of Bristol, Woodland Road, Bristol BS8 1UG, UK
- (Author for correspondence: tel +44 117 9287480; email )
| | - S R Barnes
- SESVanderHave NV/SA, Industriepark, Soldatenplein Z2 nr 15, 3300 Tienen, Belgium
| | - M W Chase
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK
| | - M Clarke
- UK, Nordics and Baltics OSR Breeder, Monsanto UK Ltd, Floor 1, Building 2030, Cambourne Business Park, Cambridge CB23 6DW, UK
| | - D Grierson
- Plant & Crop Sciences Division, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Sutton Bonington, LE12 5RD, UK
| | - K J Edwards
- School of Biological Sciences, University of Bristol, Woodland Road, Bristol BS8 1UG, UK
| | - G J Jellis
- HGCA, Agriculture and Horticulture Development Board, Stoneleigh Park, Kenilworth, Warwickshire CV8 2TL, UK
- Folia Partners Ltd, 134 Foundling Court, Bloomsbury, London WC1N 1QF, UK
| | - J D Jones
- Sainsbury Laboratory, John Innes Centre, Norwich NR4 7UH, UK
| | - S Knapp
- Department of Botany, The Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - G Oldroyd
- Department of Disease and Stress Biology, John Innes Centre, Norwich NR4 7UH, UK
| | - G Poppy
- School of Biological Sciences, University of Southampton, Boldrewood Campus, Southampton SO16 7PX, UK
| | - P Temple
- Wold Farm, Driffield, East Yorkshire YO25 3BB, UK
| | - R Williams
- Royal Horticultural Society, Wisley, Woking, Surrey GU23 6QB, UK
| | - R Bastow
- GARNet, School of Biological Sciences, University of Warwick, Wellesbourne, Warwickshire CV35 9EF, UK
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Wilson LB, LeDoux JF, Barnes SR. Brief stimulation of the peroneal nerve attenuates the exercise pressor reflex in anaesthetised cats. Auton Neurosci 2005; 118:1-11. [PMID: 15795173 DOI: 10.1016/j.autneu.2004.11.011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2004] [Revised: 11/29/2004] [Accepted: 11/30/2004] [Indexed: 11/25/2022]
Abstract
We recently demonstrated that applying capsaicin to the common peroneal nerve, thereby activating small diameter afferent neurons, caused a substantial rise in mean arterial pressure (MAP) and heart rate (HR) that lasted approximately 20 min. In addition, this application of capsaicin transiently attenuated the exercise pressor reflex (EPR). The purpose of the current study was to test the hypothesis that stimulating the peroneal nerve at an intensity that activated both myelinated and unmyelinated axons for a short duration (1 min) causes a similar attenuation of the EPR. Cats were anaesthetised with alpha-chloralose and urethane, the popliteal fossa was exposed, and static contraction was induced by stimulating the tibial nerve. The ipsilateral peroneal nerve was cut and placed on a stimulating electrode. Prior to peroneal nerve stimulation, static contraction of the triceps surae muscle for 1 min increased MAP 48+/-8 mmHg and HR 16+/-3 bpm. Electrical stimulation of the central end of the cut peroneal nerve for 1 min (100 x motor threshold; 40 Hz; 0.1 ms) increased MAP and HR by 62+/-11 mmHg and 28+/-4 bpm, respectively. These increases returned to prestimulation levels within 1 min. Two minutes after the peroneal stimulation was stopped, the EPR was markedly reduced as muscle contraction increased MAP and HR by 20+/-4 mmHg and 7+/-2 bpm, respectively. Repeating the muscle contraction approximately 25 min after peroneal stimulation increased MAP and HR by 38+/-8 mmHg and 12+/-2 bpm, indicating some recovery of the EPR. These results show that brief (1 min) electrical stimulation of afferent neurons in the peroneal nerve attenuates the EPR. This supports the hypothesis that strong activation of small diameter afferent neurons stimulates a nervous system mechanism that diminishes the sensory input from skeletal muscle involved in cardiovascular regulation.
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Affiliation(s)
- L B Wilson
- Department of Pharmacology, Physiology, and Neuroscience, USC School of Medicine, Basic Science Bldg 1, VA Campus, 6439 Garner's Ferry Road, Columbia, SC 29209, USA.
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Burns MJ, Barnes SR, Bowman JG, Clarke MHE, Werner CP, Kearsey MJ. QTL analysis of an intervarietal set of substitution lines in Brassica napus: (i) Seed oil content and fatty acid composition. Heredity (Edinb) 2003; 90:39-48. [PMID: 12522424 DOI: 10.1038/sj.hdy.6800176] [Citation(s) in RCA: 118] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
Abstract
Backcross breeding with marker-assisted selection was used to construct an intervarietal set of part chromosome substitution lines in Brassica napus, formed from a cross between two winter varieties of oilseed rape: Tapidor and Victor. A total of 22 lines from this substitution library were examined over a 3-year period, in a total of nine field trials, for seed oil fatty acid composition and seed oil content. Trialing of the substitution lines gave evidence for the existence of 13 quantitative trait loci (QTL). All 13 QTL affected fatty acid composition of the seed, and were distributed among linkage groups 1, 3, 6, 7, 8, 11, 13, 14, 18, and 19. Seven of these QTL, on linkage groups 3, 6, 8, 13, 14, 18, and 19, also affected total seed oil content. The positions of these QTL are compared to those in the published literature and with respect to erucic acid QTL previously identified in a backcross population of the same cross. The substitution line approach gives increased precision and sensitivity for QTL mapping compared to other methods.
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Affiliation(s)
- M J Burns
- Plant Genetics and Cell Biology Group, School of Biosciences, The University of Birmingham, UK.
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Abstract
The overall composition of the maize B is similar to that of the standard chromosome complement (A-chromosomes). This has been demonstrated by the use of several methods including: (a) genomic in situ hybridization (GISH), (b) analysis of highly repetitive sequences by the comparison of restriction digests of 0B and +B DNA and (c) the characterization of middle-repetitive cloned sequences. By the use of the technique of random amplification of polymorphic DNA-polymerase chain reaction, we have identified a B-specific repetitive sequence family. Sequence analysis of the B-specific clone reveals a relationship to the PREM-1 family of maize retroelements, which are preferentially transcribed in pollen. These results suggest an internal origin of the B-chromosome from within the maize genome, but demonstrate also that specific sequences can evolve by rapid processes of genomic turnover. Models for the origin of the maize B are discussed in the context of the present data.
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Affiliation(s)
- E A Stark
- Department of Botany, University of Reading, UK
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Berry ST, Leon AJ, Hanfrey CC, Challis P, Burkholz A, Barnes SR, Rufener GK, Lee M, Caligari PD. Molecular marker analysis of Helianthus annuus L. 2. Construction of an RFLP linkage map for cultivated sunflower. Theor Appl Genet 1995; 91:195-9. [PMID: 24169763 DOI: 10.1007/bf00220877] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/1993] [Accepted: 04/18/1994] [Indexed: 05/20/2023]
Abstract
A detailed linkage map of Helianthus annuus was constructed based on segregation at 234 RFLP loci, detected by 213 probes, in an F2 population of 289 individuals (derived from a cross between the inbred lines HA89 and ZENB8). The genetic markers covered 1380 centiMorgans (cM) of the sunflower genome and were aranged in 17 linkage groups, corresponding to the haploid number of chromosomes in this species. One locus was found to be unlinked. Although the average interval size was 5.9 cM, there were a number of regions larger than 20 cM that were devoid of markers. Genotypic classes at 23 loci deviated significantly from the expected ratios (1∶2∶1 or 3∶1), all showing a reduction in the ZENB8 homozygous class. The majority of these loci were found to map to four regions on linkage groups G, L and P.
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Affiliation(s)
- S T Berry
- ZENECA Seeds, Plant Biotechnology, Jealott's Hill Research Station, RG12 6EY, Bracknell, Berkshire, UK
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Berry ST, Allen RJ, Barnes SR, Caligari PD. Molecular marker analysis of Helianthus annuus L. 1. Restriction fragment length polymorphism between inbred lines of cultivated sunflower. Theor Appl Genet 1994; 89:435-441. [PMID: 24177892 DOI: 10.1007/bf00225378] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/1993] [Accepted: 02/11/1994] [Indexed: 06/02/2023]
Abstract
cDNA and PstI genomic clones have been used to assess levels of restriction fragment length polymorphism (RFLP) in Helianthus annuus and to determine the inter-relationships between a diverse set of 24 inbred lines. Of the cDNA clones screened 45% were useful as RFLP probes, compared to less than 20% from the PstI library, which showed high levels of redundancy for high copy sequences. Fifty-seven low-copy DNA probes (23 PstI and 34 cDNA clones) were used to fingerprint 12 maintainer (B) lines and 12 restorer (R) lines. The average number of RFLP variants per probe was found to be 3.2, with a mean polymorphic index of 0.49, indicating that high levels of nuclear DNA polymorphism are to be found in cultivated sunflower. Cluster and principal coordinate analysis of the fingerprinting data clearly separated the maintainer and restorer lines, but there was a degree of association between 2 unbranched R-lines and the B-line germ plasm pool.
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Affiliation(s)
- S T Berry
- ZENECA Seeds, Plant Biotechnology, Jealott's Hill Research Station, RG12 6EY, Bracknell, Berkshire, UK
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Daly A, Kellam P, Berry ST, Chojecki AJ, Barnes SR. The isolation and characterisation of plant sequences homologous to human hypervariable minisatellites. EXS 1991; 58:330-41. [PMID: 1651259 DOI: 10.1007/978-3-0348-7312-3_23] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
We have isolated DNA probes, homologous to the human hypervariable minisatellite sequence 33.15, from the genome of rice (Oryza sativa). These probes are capable of producing a multilocus rice DNA fingerprint. The rice sequence has a tandem repeating structure based on a 12 bp GC-rich repeat which shows homology to its human counterpart. This probe detects up to 30 loci which are at a number of unlinked chromosomal sites. The GC-rich sequence is invariably associated with an open reading frame (ORF) of unknown function. The ORF is probably a member of a small multigene family.
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Affiliation(s)
- A Daly
- I.C.I Seeds, Jealott's Hill Research Station, Bracknell, Berkshire, Great Britain
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Williams LE, Abee CR, Barnes SR, Ricker RB. Cage design and configuration for an arboreal species of primate. Lab Anim Sci 1988; 38:289-91. [PMID: 3411915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The squirrel monkey (genus Saimiri) is an arboreal primate from equatorial South America. This species forms large social groups that consist of multiple females and males of varying ages, from infant to adult. As the use of squirrel monkeys in research continues to grow, an understanding of optimal cage design and environment is essential. The University of South Alabama Primate Research Laboratory houses a breeding colony of 350 squirrel monkeys. Each group cage, measuring 4.5 X 2.5 X 1.5 meters, can contain up to 20 animals. A breeding group consists of one adult male, eight to ten adult females, and varying numbers of infant and juvenile animals. In order to determine the most suitable cage environment for the squirrel monkey, a series of studies were carried out to compare various perch materials and cage configurations. Squirrel monkeys preferred a poly-vinyl-chloride pipe perch (rigid) over rope perches (non-rigid). When provided with multiple levels of perches, all levels were used. Males tended to distribute their activities randomly at different levels. In a two tiered perch arrangement, females concentrated 67% of their social activity on the top tier. In a triple tier configuration, females concentrated 66% of their travel on the top tier. These results indicate that by creating a cage environment with multiple tiers of horizontal perches the effective cage space can be doubled or tripled. This provides an effective means of reducing population density without enlarging the dimensions of the cage or reducing social group size.
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Affiliation(s)
- L E Williams
- Department of Comparative Medicine, College of Medicine, University of South Alabama, Mobile 36688
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Abstract
A method of preparing chromosomes from plant root tips for in situ hybridization with tritiated DNA is described. The technique relies on the enzymic hydrolysis of plant cell walls with a pectinase-cellulase mixture. It is shown that, despite the enzymic mixture possessing nuclease activity, there is no detectable degradation of DNA within fixed root tips. To demonstrate the suitability of this method of preparing plant chromosomes for in situ hybridization, a cloned repetitive DNA sequence has been hybridized to Allium sativum chromosomes. Chromosomes prepared using this technique also can be readily C-banded.
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Pental D, Barnes SR. Interrelationship of cultivated rices Oryza sativa and O. glaberrima with wild O. perennis complex : Analysis of fraction 1 protein and some repeated DNA sequences. Theor Appl Genet 1985; 70:185-191. [PMID: 24254178 DOI: 10.1007/bf00275320] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/1984] [Indexed: 06/02/2023]
Abstract
Phylogenetic relationship of the cultivated rices Oryza sativa and O. glaberrima with the O. perennis complex, distributed on the three continents of Asia, Africa and America, and O. australiensis has been studied using Fraction 1 protein and two repeated DNA sequences as markers. Fraction 1 protein isolated from the leaf tissue of accessions of different species was subjected to isoelectric focusing. All the species studied have similar nuclear-encoded small subunit polypeptides and chloroplast-encoded large subunit polypeptides, except two of the O. perennis accessions from South America and O. australiensis, which have a different pattern for the chloroplast subunit. Two DNA sequences were isolated from Eco R1 restriction endonuclease digests of total DNA from O. sativa. One of the sequences has been characterized as highly repeated satellite DNA, and the other one as a moderately repeated DNA sequence. These sequences were used as probes in DNA/DNA hybridization with restriction endonuclease digested DNA from some accessions of the different species. Those accessions that are divergent for large subunit polypeptides of Fraction 1 protein (O. australiensis and two of the four South American O. perennis accessions) also lack the satellite DNA and have a different hybridization pattern with the moderately repeated sequence. All other accessions, irrespective of their geographical origin, are similar. We propose that various accessions of O. perennis from Africa and Asia are closely related to O. sativa and O. glaberrima, and that the dispersal of cultivated and O. perennis rices to different continents may be quite recent. The American O. perennis is a heterogeneous group. Some of the accessions ascribed to this group are closely related to the Asian and African O. perennis, while others have diverged.
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Affiliation(s)
- D Pental
- Department of Botany, University of Nottingham, NG7 2RD, Nottingham, England
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Barnes SR, James AM, Jamieson G. The organisation, nucleotide sequence, and chromosomal distribution of a satellite DNA from Allium cepa. Chromosoma 1985. [DOI: 10.1007/bf00348692] [Citation(s) in RCA: 71] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Abstract
In common with many other eukaryotic species, the genomes of species in the genus Allium contain a high proportion of repeated DNA sequences, which may be implicated in the considerable differences in genome size that are seen between even very closely related species. The gross organization of repetitive sequences within the genome of Allium sativum and of some other related species has been investigated using DNA/DNA hybridization studies. Such studies show that there has been much modulation in the amounts of different repeated DNA families during the evolution of the genus Allium; these repetitive elements are interspersed in all species with sequences of low repetition. The organization and distribution of one particular repetitive family within the genus has been examined using a cloned hybridization probe. Hybridization of this probe to DNA from related genomes reveals that this element is present in all Allium species examined, but with large-scale modulation of its abundance, and some considerable changes in its sequence environment. The evolution of such genome-specific arrangements of common repetitive elements and the possible mechanisms by which they might be maintained are discussed.
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Abstract
A noninvasive technique for assessing cardiac output (CO) was evaluated by comparing it with thermodilution determinations in patients in the intensive care unit. The new method uses pulsed ultrasound to measure aortic diameter and continuous-wave Doppler ultrasound to obtain aortic blood velocity. An initial study evaluating just the velocity measurement showed that changes of the Doppler index of output (DI) correlated well with those of thermodilution cardiac output (TDCO). Linear regression analysis yielded delta DI = 0.87 delta TDCO + 0.14 (r = 0.83, n = 95). Using a university research instrument these measurements were possible in 54 of 60 patients (90%). A second study using a prototype commercial device incorporated the diameter measurement. Ultrasonic cardiac output (UCO), calculated as the time integral of velocity multiplied by the aortic area, was compared to TDCO. The data, obtained from 45 of 53 patients (85%), are described by the linear regression UCO = 0.95TDCO + 0.38 (r = 0.94, n = 110) over a range of 2-11 l/min. Patients with aortic stenosis, aortic insufficiency or a prosthetic valve have been excluded from the second study due to conditions likely to violate the assumptions upon which the calculation of absolute cardiac output is based. These results indicate that accurate CO can be measured by noninvasive ultrasound in most patients. The technique may be useful for extended CO monitoring in acute care patients and for CO assessment in many other types of patients undergoing diagnostic studies and therapeutic interventions.
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Barnes SR, Webb DA, Dover G. The distribution of satellite and main-band DNA components in the melanogaster species subgroup of Drosophila. I. Fractionation of DNA in actinomycin D and distamycin A density gradients. Chromosoma 1978; 67:341-63. [PMID: 99293 DOI: 10.1007/bf00285965] [Citation(s) in RCA: 55] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Fractionation of total adult DNA of five of the seven species of the melanogaster species sub-group of Drosophila in actinomycin D and distamycin A caesium density gradients has revealed the presence of three main-band DNA components, common to all species, and ten satellite DNAs that are distributed between the species. Satellite DNAs are either unique to a species or common to two or more species. The abundance of a common satellite DNA varies between species. There is no simple relationship between the presence of a satellite DNA and a branch point of phylogenetic divergence; nevertheless the arrangement of the species in a phylogeny that is based on the numbers of satellites held in common accurately reflects the pattern of relationships between the same species based on differences in inversions of polytene chromosomes. The species can be similarly arranged according to the compositions of their mitochondrial DNAs. It is possible that the same basic set of sequences, each of low frequency, is common to all species with arbitrary or selected amplification of particular sequences to differing extents in individual species. The conservation of satellites in the group and the close parallel between the distributions of satellites and inversions between the species suggests that either the processes that operate to change both chromosomal phenomena are similarly time-dependent and occurring at relatively low rates or that their rates of change are restricted according to some undetermined functions of these aspects of the genome.
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Barnes SR. Reviews. Heredity (Edinb) 1978. [DOI: 10.1038/hdy.1978.77] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
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