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Güler K, Yanık T, Alak G. Investigations on the shelf life of rainbow trout fillets covered by quinoa biofilms enriched with different essential oils ( Nigella sativa and Mentha piperita). FOOD SCI TECHNOL INT 2024; 30:251-259. [PMID: 36523191 DOI: 10.1177/10820132221145973] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2023]
Abstract
Having no adverse effects on the consumer's health, causing zero or minimal damage to the environment, and maintaining the nutritional quality of the product are too important criteria for food packaging materials. Edible biofilm packaging techniques are successful to meet many of these features. To strengthen this claim, rainbow trout (Oncorhynchus mykiss) fillets were coated with an edible film solution (obtained from quinoa starch), which attracted a lot of attention in terms of nutritional value. The prepared biofilm solutions were applied in four different groups (control, quinoa, quinoa + black seed oil, and quinoa + mint oil) and stored in refrigerator conditions (4 ± 1 °C) for 15 days. Microbiological (total aerobic mesophilic bacteria, psychrophilic bacteria, Pseudomonas, lactic acid bacteria, and Enterobacteriaceae) and chemical analyses (TBARS, TVB-N, pH) were performed on certain days of storage. At the end of the study, it was stated that coating fish fillets with edible quinoa, which was enriched by black cumin and mint essential oils, had positive chemical and microbiological results. The highest value for pH was 7.03 ± 0.09 obtained in the control group. It was found that black seed oil has antimicrobial specifications via slowing the microorganism development and prolongs the storage time. The TVB-N value was below the consumable limit value (25 mg/100 g) in the treatment groups and the TBARS value was lowest (1.62 ± 0.21 μmolMA/kg) in the black seed oil group. Consequently, it is suggested that black seed oil may be used on trout fillets to prolong storage time.
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Affiliation(s)
- Kübra Güler
- Department of Aquaculture, Graduate School of Natural and Applied Sciences, Atatürk University, Erzurum, Turkey
| | - Telat Yanık
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, Erzurum, Turkey
| | - Gonca Alak
- Department of Seafood Processing Technology, Faculty of Fisheries, Ataturk University, Erzurum, Turkey
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Lopes-Lima M, Gürlek ME, Kebapçı Ü, Şereflişan H, Yanık T, Mirzajani A, Neubert E, Prié V, Teixeira A, Gomes-Dos-Santos A, Barros-García D, Bolotov IN, Kondakov AV, Vikhrev IV, Tomilova AA, Özcan T, Altun A, Gonçalves DV, Bogan AE, Froufe E. Diversity, biogeography, evolutionary relationships, and conservation of Eastern Mediterranean freshwater mussels (Bivalvia: Unionidae). Mol Phylogenet Evol 2021; 163:107261. [PMID: 34273504 DOI: 10.1016/j.ympev.2021.107261] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 07/09/2021] [Accepted: 07/12/2021] [Indexed: 11/24/2022]
Abstract
Located at the junction between Europe, Africa, and Asia, with distinct evolutionary origins and varied ecological and geographical settings, together with a marked history of changes in orogeny and configuration of the main river basins, turned the Eastern Mediterranean into a region of high diversity and endemism of freshwater taxa. Freshwater mussels (Bivalvia, Unionidae) from the Western Palearctic have been widely studied in their European range, but little attention has been dedicated to these taxa in the Eastern Mediterranean region and their diversity and phylogeography are still poorly understood. The present study aims to resolve the diversity, biogeography, and evolutionary relationships of the Eastern Mediterranean freshwater mussels. To that end, we performed multiple field surveys, phylogenetic analyses, and a thorough taxonomic revaluation. We reassessed the systematics of all Unionidae species in the region, including newly collected specimens across Turkey, Israel, and Iran, combining COI + 16S + 28S and COI phylogenies with molecular species delineation methods. Phylogeographical patterns were characterized based on published molecular data, newly sequenced specimens, and species distribution data, as well as ancestral range estimations. We reveal that Unionidae species richness in the Eastern Mediterranean is over 70% higher than previously assumed, counting 19 species within two subfamilies, the Unioninae (14) and Gonideinae (5). We propose two new species, Anodonta seddonisp. nov. and Leguminaia anatolicasp. nov. Six additional taxa, Unio delicatusstat. rev., Unio eucirrusstat. rev., Unio huetistat. rev., Unio sesirmensisstat. rev., Unio terminalisstat. rev. removed from the synonymy of Unio tigridis, as well as Unio damascensisstat. rev. removed from the synonymy of Unio crassus, are re-described. The nominal taxa Unio rothi var. komarowi O. Boettger, 1880 and Unio armeniacus Kobelt, 1911 are proposed as new synonyms of Unio bruguierianus, and Anodonta cyrea Drouët, 1881 and Anodonta cilicica Kobelt & Rolle, 1895 as new synonyms of Anodonta anatina. Also, the presence of Unio tumidus in the Maritza River is confirmed. The phylogeographic patterns described here are interpreted concerning major past geological events. Conservation needs and implications are presented, together with populations and species conservation priorities.
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Affiliation(s)
- Manuel Lopes-Lima
- CIBIO/InBIO - Research Center in Biodiversity and Genetic Resources, University of Porto, Campus Agrário de Vairão, 4485-661 Vairão, Portugal; CIIMAR/CIMAR - Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, P 4450-208 Matosinhos, Portugal; SSC/IUCN - Mollusc Specialist Group, Species Survival Commission, International Union for Conservation of Nature, c/o The David Attenborough Building, Pembroke Street, CB2 3QZ Cambridge, United Kingdom.
| | - Mustafa Emre Gürlek
- Burdur Vocational School of Food Agriculture and Livestock, Mehmet Akif Ersoy University, 15100 Burdur, Turkey
| | - Ümit Kebapçı
- Biology Department of Art and Science Faculty, Mehmet Akif Ersoy University, Burdur, Turkey
| | - Hülya Şereflişan
- Marine Sciences and Technology Faculty, Iskenderun Technical University, 31200 Iskenderun, Hatay, Turkey
| | - Telat Yanık
- Ataturk University, Faculty of Fishery, 25240 Erzurum, Turkey
| | - Alireza Mirzajani
- Inland Waters Aquaculture Research Center, Iranian Fisheries Science Research Institute, Agricultural Research Education and Extension Organization (AREEO), P.O. Box 66, Bandar-e Anzali, Iran
| | - Eike Neubert
- Natural History Museum Bern, Bernastr. 15, CH-3005 Bern, Switzerland; Institute of Ecology and Evolution, University of Bern, CH-3012 Bern, Switzerland
| | - Vincent Prié
- CIBIO/InBIO - Research Center in Biodiversity and Genetic Resources, University of Porto, Campus Agrário de Vairão, 4485-661 Vairão, Portugal; Institute of Systematics, Evolution, Biodiversity (ISYEB), National Museum of Natural History (MNHN), CNRS, SU, EPHE, UA CP 51, 57 rue Cuvier, 75005 Paris, France
| | - Amilcar Teixeira
- Centro de Investigação de Montanha (CIMO), Instituto Politécnico de Bragança, Campus de Santa Apolónia, 5300-253 Bragança, Portugal
| | - André Gomes-Dos-Santos
- CIIMAR/CIMAR - Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, P 4450-208 Matosinhos, Portugal; Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre, 1021/1055 Porto, Portugal
| | - David Barros-García
- CIIMAR/CIMAR - Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, P 4450-208 Matosinhos, Portugal
| | - Ivan N Bolotov
- N. Laverov Federal Center for Integrated Arctic Research of the Ural Branch of the Russian Academy of Sciences, Northern Dvina Emb. 23, 163000 Arkhangelsk, Russia; Northern Arctic Federal University, Northern Dvina Emb. 17, 163017 Arkhangelsk, Russia; Saint-Petersburg State University, Universitetskaya Emb. 7/9, 199034 Saint Petersburg, Russia
| | - Alexander V Kondakov
- N. Laverov Federal Center for Integrated Arctic Research of the Ural Branch of the Russian Academy of Sciences, Northern Dvina Emb. 23, 163000 Arkhangelsk, Russia; Northern Arctic Federal University, Northern Dvina Emb. 17, 163017 Arkhangelsk, Russia; Saint-Petersburg State University, Universitetskaya Emb. 7/9, 199034 Saint Petersburg, Russia
| | - Ilya V Vikhrev
- N. Laverov Federal Center for Integrated Arctic Research of the Ural Branch of the Russian Academy of Sciences, Northern Dvina Emb. 23, 163000 Arkhangelsk, Russia; Northern Arctic Federal University, Northern Dvina Emb. 17, 163017 Arkhangelsk, Russia; Saint-Petersburg State University, Universitetskaya Emb. 7/9, 199034 Saint Petersburg, Russia
| | - Alena A Tomilova
- N. Laverov Federal Center for Integrated Arctic Research of the Ural Branch of the Russian Academy of Sciences, Northern Dvina Emb. 23, 163000 Arkhangelsk, Russia
| | - Tahir Özcan
- Marine Sciences and Technology Faculty, Iskenderun Technical University, 31200 Iskenderun, Hatay, Turkey
| | - Ayhan Altun
- Marine Sciences and Technology Faculty, Iskenderun Technical University, 31200 Iskenderun, Hatay, Turkey
| | - Duarte V Gonçalves
- CIIMAR/CIMAR - Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, P 4450-208 Matosinhos, Portugal
| | - Arthur E Bogan
- North Carolina Museum of Natural Sciences, 11 West Jones St, Raleigh, NC 27601, United States
| | - Elsa Froufe
- CIIMAR/CIMAR - Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, P 4450-208 Matosinhos, Portugal
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Ucar A, Ozmen Ozgun D, Alak G, Gul HI, Kocaman M, Yamalı C, Parlak V, Atamanalp M, Maslat A, Almuhur R, Yanık T. Biological activities of a newly synthesized pyrazoline derivative 4-(3-(4-bromophenyl)-5-(2,4-dimethoxyphenyl)-4,5-dihydro-1H-pyrazol-1-yl) benzenesulfonamide (B4) compound on rainbow trout alevins, Oncorhynchus mykiss. In Vitro Cell Dev Biol Anim 2021; 57:17-20. [PMID: 33474687 DOI: 10.1007/s11626-020-00541-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Accepted: 12/17/2020] [Indexed: 10/22/2022]
Affiliation(s)
- Arzu Ucar
- Dept Aquaculture, Fac Fisheries, Ataturk Univ, TR-25240, Erzurum, Turkey
| | - Dilan Ozmen Ozgun
- Dept Pharmaceut Chem, Fac Pharm, Ibrahim Cecen Univ Agri, TR-04-100, Agri, Turkey
| | - Gonca Alak
- Dept Aquaculture, Fac Fisheries, Ataturk Univ, TR-25240, Erzurum, Turkey
| | - Halise Inci Gul
- Dept Pharmaceut Chem, Fac Pharm, Ataturk Univ, TR-25240, Erzurum, Turkey
| | - Mahmut Kocaman
- Dept Aquaculture, Fac Fisheries, Ataturk Univ, TR-25240, Erzurum, Turkey
| | - Cem Yamalı
- Dept Pharmaceut Chem, Fac Pharm, Ataturk Univ, TR-25240, Erzurum, Turkey
| | - Veysel Parlak
- Dept Aquaculture, Fac Fisheries, Ataturk Univ, TR-25240, Erzurum, Turkey
| | - Muhammed Atamanalp
- Dept Aquaculture, Fac Fisheries, Ataturk Univ, TR-25240, Erzurum, Turkey.
| | - Ahmed Maslat
- Dept Biol Sci, Fac Sci, Yarmouk Univ, Irbid, Jordan
| | - Rana Almuhur
- Dept Biol Sci, Fac Sci, Al al-Bayt Univ, Mafraq, Jordan
| | - Telat Yanık
- Dept Aquaculture, Fac Fisheries, Ataturk Univ, TR-25240, Erzurum, Turkey
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Alak G, Ucar A, Çilingir Yeltekin A, Parlak V, Nardemir G, Kızılkaya M, Hakkı Taş İ, Yılgın M, Atamanalp M, Topal A, Mahmut Kocaman E, Yanık T. Neurophysiological responses in the brain tissues of rainbow trout (Oncorhynchus mykiss) treated with bio-pesticide. Drug Chem Toxicol 2018; 42:203-209. [PMID: 30449198 DOI: 10.1080/01480545.2018.1526180] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
The aim of this study was to investigate neurophysiological responses in rainbow trout brain tissue exposed to natural/botanical pesticides. Fish were exposed to botanical and synthetic pesticides over a 21-day period. At the end of the treatment period, oxidative DNA damage (indicated by 8-OHdG (8-hydroxy-2'-deoxyguanosine), AChE activity (acetylcholinesterase) and transcriptional parameters (gpx (glutathione peroxidase), sod (superoxide dismutase), cat (catalase), HSP70 (heat shock protein 70) and CYP1A (cytochromes P450)) was investigated in control and application groups. Our results indicated that brain AChE activities decreased very significantly in fish treated with both insecticide types when compared with control (p < 0.05). 8-OHdG activity increased in a dose/time-dependent situation in the brain tissues of Oncorhynchus mykiss (p < 0.05). In addition, with regards to gene expression, gpx sod and, cat expressions were down-regulated, whereas CYP1A and HSP70 gene expression were up-regulated in fish treated with both insecticides when compared to the control group (p < 0.05). The data for this study suggests that bio-pesticides can cause neurophysiological changes in fish brain tissue.
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Affiliation(s)
- Gonca Alak
- a Department of Aquaculture , Faculty of Fisheries, Ataturk University , Erzurum , Turkey
| | - Arzu Ucar
- a Department of Aquaculture , Faculty of Fisheries, Ataturk University , Erzurum , Turkey
| | - Aslı Çilingir Yeltekin
- b Department of Chemistry , Faculty of Science, University of Yuzuncu Yıl , Van , Turkey
| | - Veysel Parlak
- a Department of Aquaculture , Faculty of Fisheries, Ataturk University , Erzurum , Turkey
| | - Gizem Nardemir
- c Graduate School of Natural and Applied Sciences, Ataturk University , Erzurum , Turkey
| | - Merve Kızılkaya
- c Graduate School of Natural and Applied Sciences, Ataturk University , Erzurum , Turkey
| | - İsmail Hakkı Taş
- d Department of Parasitology , Faculty of Veterinary, Ataturk University , Erzurum , Turkey
| | - Mustafa Yılgın
- e Graduate School of Natural and Applied Sciences, Ataturk University , Antalya , Turkey
| | - Muhammed Atamanalp
- a Department of Aquaculture , Faculty of Fisheries, Ataturk University , Erzurum , Turkey
| | - Ahmet Topal
- f Department of Basic Science , Faculty of Fisheries, AtaturkUniversity , Erzurum , Turkey
| | - Esat Mahmut Kocaman
- a Department of Aquaculture , Faculty of Fisheries, Ataturk University , Erzurum , Turkey
| | - Telat Yanık
- a Department of Aquaculture , Faculty of Fisheries, Ataturk University , Erzurum , Turkey
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Alak G, Ucar A, Parlak V, Yeltekin AÇ, Taş IH, Ölmez D, Kocaman EM, Yılgın M, Atamanalp M, Yanık T. Assessment of 8-hydroxy-2-deoxyguanosine activity, gene expression and antioxidant enzyme activity on rainbow trout (Oncorhynchus mykiss) tissues exposed to biopesticide. Comp Biochem Physiol C Toxicol Pharmacol 2017; 203:51-58. [PMID: 29111472 DOI: 10.1016/j.cbpc.2017.10.007] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Revised: 10/16/2017] [Accepted: 10/17/2017] [Indexed: 01/15/2023]
Abstract
The goal of this study was to determinate toxicity mechanism of biopesticide with antioxidant enzymes parameters such as superoxide dismutase (SOD), glutathione peroxidase (GPx) and catalase (CAT) and malondialdehyde (MDA) levels, oxidative DNA damage (8-hydroxy-2-deoxyguanosine (8-OHdG)), transcriptional changes of heat shock protein 70 (HSP70), and cytochromes P4501A (CYP1A), sod, cat, and gpx in liver and gill tissues of Oncorhynchus mykiss. For this aim, plant-based (natural pesticides, azadirachtin (AZA)) and synthetic pesticides (deltamethrin (DLM)) were exposed on the fish at different concentrations (0.0005 and 0.00025ppm of DLM; 0.24 and 0.12ppm of AZA) for 21 days. According to the results of the study, the activity of SOD, CAT and GPx decreased, but malondialdehyde (MDA) level and activity of 8-OHdG increased in the gill and liver of rainbow trout (p<0.05). Additionally sod, cat and gpx were down regulated; HSP70 and CYP1A were up regulated for transcriptional observation. The downwards regulation of antioxidant (sod, cat and gpx) and the upregulation of HSP70 and CYP1A was obvious with doses of AZA or DLM (p<0.05). The findings of this study suggest that biopesticide can cause biochemical and physiological effects in the fish gill and liver by causing enzyme inhibition, an increase in 8-OHdG levels and changes in both transcriptional parameters (sod, cat, gpx, HSP70 and CYP1A). We found that excessive doses of plant-based pesticide are nearly as toxic as chemical ones for aquatic organisms. Moreover, 8-OHdG, HSP70 and CYP1A used as a biomarker to determinate toxicity mechanism of biopesticide in aquatic environment.
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Affiliation(s)
- Gonca Alak
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, TR-25030 Erzurum, Turkey.
| | - Arzu Ucar
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, TR-25030 Erzurum, Turkey
| | - Veysel Parlak
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, TR-25030 Erzurum, Turkey.
| | - Aslı Çilingir Yeltekin
- Department of Chemistry, Faculty of Science, University of Yuzuncu Yıl, TR-65080 Van, Turkey
| | | | - Doğukan Ölmez
- Graduate School of Natural and Applied Sciences, TR-25030 Erzurum, Turkey
| | - Esat Mahmut Kocaman
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, TR-25030 Erzurum, Turkey
| | - Mustafa Yılgın
- Graduate School of Natural and Applied Sciences, TR-07070 Antalya, Turkey
| | - Muhammed Atamanalp
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, TR-25030 Erzurum, Turkey
| | - Telat Yanık
- Department of Aquaculture, Faculty of Fisheries, Ataturk University, TR-25030 Erzurum, Turkey
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