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Abd Wahab NH, Hasikin K, Wee Lai K, Xia K, Bei L, Huang K, Wu X. Systematic review of predictive maintenance and digital twin technologies challenges, opportunities, and best practices. PeerJ Comput Sci 2024; 10:e1943. [PMID: 38686003 PMCID: PMC11057655 DOI: 10.7717/peerj-cs.1943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 02/27/2024] [Indexed: 05/02/2024]
Abstract
Background Maintaining machines effectively continues to be a challenge for industrial organisations, which frequently employ reactive or premeditated methods. Recent research has begun to shift its attention towards the application of Predictive Maintenance (PdM) and Digital Twins (DT) principles in order to improve maintenance processes. PdM technologies have the capacity to significantly improve profitability, safety, and sustainability in various industries. Significantly, precise equipment estimation, enabled by robust supervised learning techniques, is critical to the efficacy of PdM in conjunction with DT development. This study underscores the application of PdM and DT, exploring its transformative potential across domains demanding real-time monitoring. Specifically, it delves into emerging fields in healthcare, utilities (smart water management), and agriculture (smart farm), aligning with the latest research frontiers in these areas. Methodology Employing the Preferred Reporting Items for Systematic Review and Meta-Analyses (PRISMA) criteria, this study highlights diverse modeling techniques shaping asset lifetime evaluation within the PdM context from 34 scholarly articles. Results The study revealed four important findings: various PdM and DT modelling techniques, their diverse approaches, predictive outcomes, and implementation of maintenance management. These findings align with the ongoing exploration of emerging applications in healthcare, utilities (smart water management), and agriculture (smart farm). In addition, it sheds light on the critical functions of PdM and DT, emphasising their extraordinary ability to drive revolutionary change in dynamic industrial challenges. The results highlight these methodologies' flexibility and application across many industries, providing vital insights into their potential to revolutionise asset management and maintenance practice for real-time monitoring. Conclusions Therefore, this systematic review provides a current and essential resource for academics, practitioners, and policymakers to refine PdM strategies and expand the applicability of DT in diverse industrial sectors.
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Affiliation(s)
- Nur Haninie Abd Wahab
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
- Engineering Services Division, Ministry of Health Malaysia, Putrajaya, Malaysia
| | - Khairunnisa Hasikin
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
- Center of Intelligent Systems for Emerging Technology, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Khin Wee Lai
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
| | - Kaijian Xia
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
- Affiliated Changshu Hospital, Soochow University Changshu, Jiangsu, China
| | - Lulu Bei
- School of Information Engineering, Xuzhou University of Technology, Xuzhou, China
| | - Kai Huang
- JiangSu XCMG HanYun Technologies Co., LTD., Xuzhou, China
| | - Xiang Wu
- Department of Biomedical Engineering, Faculty of Engineering, Universiti Malaya, Kuala Lumpur, Malaysia
- School of Medical Information & Engineering, Xuzhou Medical University, Xuzhou, China
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Tei M, Soma F, Barbieri E, Uga Y, Kawahito Y. Non-destructive real-time monitoring of underground root development with distributed fiber optic sensing. Plant Methods 2024; 20:36. [PMID: 38424594 PMCID: PMC10905790 DOI: 10.1186/s13007-024-01160-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Accepted: 02/15/2024] [Indexed: 03/02/2024]
Abstract
Crop genetic engineering for better root systems can offer practical solutions for food security and carbon sequestration; however, soil layers prevent the direct visualization of plant roots, thus posing a challenge to effective phenotyping. Here, we demonstrate an original device with a distributed fiber-optic sensor for fully automated, real-time monitoring of underground root development. We show that spatially encoding an optical fiber with a flexible and durable polymer film in a spiral pattern can significantly enhance sensor detection. After signal processing, the resulting device can detect the penetration of a submillimeter-diameter object in the soil, indicating more than a magnitude higher spatiotemporal resolution than previously reported with underground monitoring techniques. Additionally, we also developed computational models to visualize the roots of tuber crops and monocotyledons and then applied them to radish and rice to compare the results with those of X-ray computed tomography. The device's groundbreaking sensitivity and spatiotemporal resolution enable seamless and laborless phenotyping of root systems that are otherwise invisible underground.
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Affiliation(s)
- Mika Tei
- Institute of Crop Science, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8518, Japan.
- Research Institute for Value-Added-Information Generation, Japan Agency for Marine-Earth Science and Technology, 3173-25 Showa-machi, Kanazawa-ku, Yokohama, Kanagawa, 236-0001, Japan.
| | - Fumiyuki Soma
- Institute of Crop Science, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8518, Japan
| | - Ettore Barbieri
- Research Institute for Value-Added-Information Generation, Japan Agency for Marine-Earth Science and Technology, 3173-25 Showa-machi, Kanazawa-ku, Yokohama, Kanagawa, 236-0001, Japan
- Advanced Institute for Marine Ecosystem Change, Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima, Yokosuka, Kanagawa, 237-0061, Japan
| | - Yusaku Uga
- Institute of Crop Science, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8518, Japan
| | - Yosuke Kawahito
- Research Institute for Value-Added-Information Generation, Japan Agency for Marine-Earth Science and Technology, 3173-25 Showa-machi, Kanazawa-ku, Yokohama, Kanagawa, 236-0001, Japan
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Qi Y, Hossain MS. Semi-supervised Federated Learning for Digital Twin 6G-enabled IIoT: A Bayesian estimated approach. J Adv Res 2024:S2090-1232(24)00074-2. [PMID: 38417576 DOI: 10.1016/j.jare.2024.02.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 01/03/2024] [Accepted: 02/17/2024] [Indexed: 03/01/2024] Open
Abstract
INTRODUCTION In recent years, the proliferation of Industrial Internet of Things (IIoT) devices has resulted in a substantial increase in data generation across various domains, including the nascent 6G networks. Digital Twins (DTs), serving as virtual replicas of physical entities, have gained popularity within the realm of IoT due to their capacity to simulate and optimize physical systems in a cost-effective manner. Nonetheless, the security of DTs and the safeguarding of the sensitive data they generate have emerged as paramount concerns. Fortunately, the Federated Fearning (FL) system has emerged as a promising solution to address the challenge of data privacy within DTs. Nonetheless, the requisite acquisition of a significant volume of labeled data for training purposes poses a formidable challenge, particularly in a DT environment that blends real and virtual data. OBJECTIVES To tackle this challenge, this study presents an innovative Semi-supervised FL (SSFL) framework designed to overcome the scarcity of labeled data through the strategic utilization of pseudo-labels. METHODS Specifically, our proposed SSFL algorithm, named SSFL-MBE, introduces a novel approach by combining Mix data augmentation and Bayesian Estimation consistency regularization loss, thereby integrating robust augmentation techniques to enhance model generalization. Furthermore, we introduce a Bayesian-estimated pseudo-label loss that leverages prior probabilistic knowledge to enhance model performance. Our investigation focuses particularly on a demanding scenario where labeled and unlabeled data are segregated across disparate locations, specifically, the server and various clients. RESULTS Comprehensive evaluations conducted on CIFAR-10 and MNIST datasets conclusively demonstrate that our proposed algorithm consistently surpasses mainstream SSFL baseline models, exhibiting an enhancement in model performance ranging from 0.5% to 1.5%. CONCLUSION Overall, this work contributes to the development of more efficient and secure approaches for model training in DT-empowered FL settings, which is crucial for the deployment of IIoTs in 6G-enabled environments.
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Affiliation(s)
- Yuanhang Qi
- School of Computer Science, University of Electronic Science and Technology of China, Zhongshan Institute, Zhongshan 528402, China.
| | - M Shamim Hossain
- Department of Software Engineering, College of Computer and Information Sciences, King Saud University, Riyadh 12372, Saudi Arabia.
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Arsène S, Parès Y, Tixier E, Granjeon-Noriot S, Martin B, Bruezière L, Couty C, Courcelles E, Kahoul R, Pitrat J, Go N, Monteiro C, Kleine-Schultjann J, Jemai S, Pham E, Boissel JP, Kulesza A. In Silico Clinical Trials: Is It Possible? Methods Mol Biol 2024; 2716:51-99. [PMID: 37702936 DOI: 10.1007/978-1-0716-3449-3_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/14/2023]
Abstract
Modeling and simulation (M&S), including in silico (clinical) trials, helps accelerate drug research and development and reduce costs and have coined the term "model-informed drug development (MIDD)." Data-driven, inferential approaches are now becoming increasingly complemented by emerging complex physiologically and knowledge-based disease (and drug) models, but differ in setup, bottlenecks, data requirements, and applications (also reminiscent of the different scientific communities they arose from). At the same time, and within the MIDD landscape, regulators and drug developers start to embrace in silico trials as a potential tool to refine, reduce, and ultimately replace clinical trials. Effectively, silos between the historically distinct modeling approaches start to break down. Widespread adoption of in silico trials still needs more collaboration between different stakeholders and established precedence use cases in key applications, which is currently impeded by a shattered collection of tools and practices. In order to address these key challenges, efforts to establish best practice workflows need to be undertaken and new collaborative M&S tools devised, and an attempt to provide a coherent set of solutions is provided in this chapter. First, a dedicated workflow for in silico clinical trial (development) life cycle is provided, which takes up general ideas from the systems biology and quantitative systems pharmacology space and which implements specific steps toward regulatory qualification. Then, key characteristics of an in silico trial software platform implementation are given on the example of jinkō.ai (nova's end-to-end in silico clinical trial platform). Considering these enabling scientific and technological advances, future applications of in silico trials to refine, reduce, and replace clinical research are indicated, ranging from synthetic control strategies and digital twins, which overall shows promise to begin a new era of more efficient drug development.
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Coucke P. [Generative artificial intelligence and large language models in healthcare]. Rev Med Liege 2024; 79:54-59. [PMID: 38223971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/16/2024]
Abstract
Generative artificial intelligence (GAI) and large language models (LLM) made their fulgurant irruption in our society at all levels, inclusive in health care. Possible applications and proofs of concept are everywhere. There is without any reasonable doubt an enormous potential, especially nowadays as we are facing an ever-growing imbalance between the flux of data and the availability of human resources. The creativity of GAI will be highlighted in the quest of defining protein structures and search for new medications, as well as for the development and use of digital twins in clinical research. As far as LLM's are concerned, we need to make a distinction between general models and models dedicated specifically to healthcare. Again, making an extensive overview of used cases is becoming impossible today, facing the numerous publications in the field.
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Zsidai B, Hilkert AS, Kaarre J, Narup E, Senorski EH, Grassi A, Ley C, Longo UG, Herbst E, Hirschmann MT, Kopf S, Seil R, Tischer T, Samuelsson K, Feldt R. A practical guide to the implementation of AI in orthopaedic research - part 1: opportunities in clinical application and overcoming existing challenges. J Exp Orthop 2023; 10:117. [PMID: 37968370 PMCID: PMC10651597 DOI: 10.1186/s40634-023-00683-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 10/21/2023] [Indexed: 11/17/2023] Open
Abstract
Artificial intelligence (AI) has the potential to transform medical research by improving disease diagnosis, clinical decision-making, and outcome prediction. Despite the rapid adoption of AI and machine learning (ML) in other domains and industry, deployment in medical research and clinical practice poses several challenges due to the inherent characteristics and barriers of the healthcare sector. Therefore, researchers aiming to perform AI-intensive studies require a fundamental understanding of the key concepts, biases, and clinical safety concerns associated with the use of AI. Through the analysis of large, multimodal datasets, AI has the potential to revolutionize orthopaedic research, with new insights regarding the optimal diagnosis and management of patients affected musculoskeletal injury and disease. The article is the first in a series introducing fundamental concepts and best practices to guide healthcare professionals and researcher interested in performing AI-intensive orthopaedic research studies. The vast potential of AI in orthopaedics is illustrated through examples involving disease- or injury-specific outcome prediction, medical image analysis, clinical decision support systems and digital twin technology. Furthermore, it is essential to address the role of human involvement in training unbiased, generalizable AI models, their explainability in high-risk clinical settings and the implementation of expert oversight and clinical safety measures for failure. In conclusion, the opportunities and challenges of AI in medicine are presented to ensure the safe and ethical deployment of AI models for orthopaedic research and clinical application. Level of evidence IV.
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Affiliation(s)
- Bálint Zsidai
- Sahlgrenska Sports Medicine Center, Gothenburg, Sweden.
- Department of Orthopaedics, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
| | - Ann-Sophie Hilkert
- Department of Computer Science and Engineering, Chalmers University of Technology, Gothenburg, Sweden
- Medfield Diagnostics AB, Gothenburg, Sweden
| | - Janina Kaarre
- Sahlgrenska Sports Medicine Center, Gothenburg, Sweden
- Department of Orthopaedics, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
- Department of Orthopaedic Surgery, UPMC Freddie Fu Sports Medicine Center, University of Pittsburgh, Pittsburgh, USA
| | - Eric Narup
- Sahlgrenska Sports Medicine Center, Gothenburg, Sweden
- Department of Orthopaedics, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
| | - Eric Hamrin Senorski
- Sahlgrenska Sports Medicine Center, Gothenburg, Sweden
- Department of Health and Rehabilitation, Institute of Neuroscience and Physiology, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
- Sportrehab Sports Medicine Clinic, Gothenburg, Sweden
| | - Alberto Grassi
- Department of Orthopaedics, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
- IIa Clinica Ortopedica E Traumatologica, IRCCS Istituto Ortopedico Rizzoli, Bologna, Italy
| | - Christophe Ley
- Department of Mathematics, University of Luxembourg, Esch-Sur-Alzette, Luxembourg
| | - Umile Giuseppe Longo
- Department of Orthopaedic and Trauma Surgery, Campus Bio-Medico University, Rome, Italy
| | - Elmar Herbst
- Department of Trauma, Hand and Reconstructive Surgery, University Hospital Münster, Münster, Germany
| | - Michael T Hirschmann
- Department of Orthopedic Surgery and Traumatology, Head Knee Surgery and DKF Head of Research, Kantonsspital Baselland, 4101, Bruderholz, Switzerland
| | - Sebastian Kopf
- Center of Orthopaedics and Traumatology, University Hospital Brandenburg a.d.H., Brandenburg Medical School Theodor Fontane, 14770, Brandenburg a.d.H., Germany
- Faculty of Health Sciences Brandenburg, Brandenburg Medical School Theodor Fontane, 14770, Brandenburg a.d.H., Germany
| | - Romain Seil
- Department of Orthopaedic Surgery, Centre Hospitalier Luxembourg and Luxembourg Institute of Health, Luxembourg, Luxembourg
| | - Thomas Tischer
- Clinic for Orthopaedics and Trauma Surgery, Malteser Waldkrankenhaus St. Marien, Erlangen, Germany
| | - Kristian Samuelsson
- Sahlgrenska Sports Medicine Center, Gothenburg, Sweden
- Department of Orthopaedics, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
- Department of Orthopaedics, Sahlgrenska University Hospital, Mölndal, Sweden
| | - Robert Feldt
- Department of Orthopaedics, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
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Dai X, Shang W, Liu J, Xue M, Wang C. Achieving better indoor air quality with IoT systems for future buildings: Opportunities and challenges. Sci Total Environ 2023; 895:164858. [PMID: 37343873 DOI: 10.1016/j.scitotenv.2023.164858] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 05/26/2023] [Accepted: 06/11/2023] [Indexed: 06/23/2023]
Abstract
With the development of IoT technology and low-cost indoor air quality (IAQ) sensors, the IoT-based IAQ monitoring platform has garnered significant research interest and demonstrated its potential in enhancing IAQ management. This study presents a comprehensive review of previous research on the development and application of IoT-based IAQ platforms in different built environments. It offers detailed insights into the design and implementation of recent IoT-based IAQ platforms. The findings indicate that the IoT-based IAQ platforms are able to provide reliable information for IAQ monitoring. To ensure quality control of the IoT-based IAQ platform, it is suggested to replace the sensors every 4-6 months for reliable monitoring. In another aspect, integrating data-driven technology into the platform is crucial for IAQ prediction and efficient control of ventilation systems, leveraging the wealth of data available from the IoT platform. According to recent studies that applied data-driven algorithms for IAQ management, it can be confirmed that the data-driven algorithms are able to prompt IAQ by providing either more information or a control strategy. However, it should be noted that only 9.1 % of the developed platforms integrated data-driven models for IAQ management. Based on our findings, current challenges and further opportunities are discussed. Future studies should focus on integrating data-driven algorithms into IoT-based IAQ platforms and developing digital twins that can be used for real building IAQ management. However, there is obvious tension between controlling ventilation for energy efficiency versus better air quality. It is important to make a balance between energy efficiency and better air quality according to the current situations of specific built environments. Also, the next generation of IoT-based IAQ platforms should include occupants in the loop to create a more occupant-centric IAQ management approach.
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Affiliation(s)
- Xilei Dai
- Department of the Built Environment, College of Design and Engineering, National University of Singapore, 4 Architecture Drive, Singapore 117566, Singapore
| | - Wenzhe Shang
- Tianjin Key Lab of Indoor Air Environmental Quality Control, School of Environmental Science and Engineering, Tianjin University, Tianjin 300072, China
| | - Junjie Liu
- Tianjin Key Lab of Indoor Air Environmental Quality Control, School of Environmental Science and Engineering, Tianjin University, Tianjin 300072, China.
| | - Min Xue
- Tianjin Key Lab of Indoor Air Environmental Quality Control, School of Environmental Science and Engineering, Tianjin University, Tianjin 300072, China
| | - Congcong Wang
- School of Environment and Energy Engineering, Beijing University of Civil Engineering and Architecture, Beijing 100044, China
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Ruangpan L, Mahgoub M, Abebe YA, Vojinovic Z, Boonya-Aroonnet S, Torres AS, Weesakul S. Real time control of nature-based solutions: Towards Smart Solutions and Digital Twins in Rangsit Area, Thailand. J Environ Manage 2023; 344:118389. [PMID: 37352632 DOI: 10.1016/j.jenvman.2023.118389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 06/01/2023] [Accepted: 06/11/2023] [Indexed: 06/25/2023]
Abstract
The intensity and frequency of hydro-meteorological hazards have increased due to fast-growing urbanisation activities and climate change. Hybrid approaches that combine grey infrastructure and Nature-Based Solutions (NBSs) have been applied as an adaptive and resilient strategy to cope with climate change uncertainties and incorporate other co-benefits. This research aims to investigate the feasibility of Real Time Control (RTC) for NBS operation in order to reduce flooding and improve their effectiveness. The study area is the irrigation and drainage system of the Rangsit Area in Thailand. The results show that during the normal flood events, the RTC system effectively reduces water level at the Western Raphiphat Canal Station compared to the system without RTC or with additional storage. Moreover, the RTC system facilitates achieving the required minimum volume and increasing the volume in the retentions. These findings highlight the potential of using RTC to improve the irrigation and drainage system operation as well as NBS implementation to reduce flooding. The RTC system can also assists in equitable water distribution between Klongs and retention areas, while also increasing the water storage in the retention areas. This additional water storage can be utilized for agricultural purposes, providing further benefits. These results represent an essential starting point for the development of Smart Solutions and Digital Twins in utilizing Real-Time Control for flood reduction and water allocation in the Rangsit Area in Thailand.
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Affiliation(s)
- Laddaporn Ruangpan
- Faculty of Applied Science, Delft University of Technology, the Netherlands; IHE Delft Institute for Water Education, the Netherlands.
| | - Mosaab Mahgoub
- IHE Delft Institute for Water Education, the Netherlands
| | | | - Zoran Vojinovic
- IHE Delft Institute for Water Education, the Netherlands; Faculty of Civil Engineering, University of Belgrade, Belgrade, Serbia; College for Engineering, Mathematics and Physical Sciences, University of Exeter, UK
| | | | | | - Sutat Weesakul
- Hydro-Informatics Institute, Thailand; Asian Institute of Technology, Thailand
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Heudel PE, Renard F, Attye A. [ Digital twins in cancer research and treatment: A future for personalized medicine]. Bull Cancer 2023; 110:1085-1087. [PMID: 37661550 DOI: 10.1016/j.bulcan.2023.07.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/19/2023] [Accepted: 07/19/2023] [Indexed: 09/05/2023]
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Chasseloup E, Hooker AC, Karlsson MO. Generation and application of avatars in pharmacometric modelling. J Pharmacokinet Pharmacodyn 2023; 50:411-423. [PMID: 37488327 PMCID: PMC10460751 DOI: 10.1007/s10928-023-09873-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2023] [Accepted: 06/26/2023] [Indexed: 07/26/2023]
Abstract
Simulations from population models have critical applications in drug discovery and development. Avatars or digital twins, defined as individual simulations matching clinical criteria of interest compared to observations from a real subject within a predefined margin of accuracy, may be a better option for simulations performed to inform future drug development stages in cases where an adequate model is not achievable. The aim of this work was to (1) investigate methods for generating avatars with pharmacometric models, and (2) explore the properties of the generated avatars to assess the impact of the different selection settings on the number of avatars per subject, their closeness to the individual observations, and the properties of the selected samples subset from the theoretical model parameters probability density function. Avatars were generated using different combinations of nature and number of clinical criteria, accuracy of agreement, and/or number of simulations for two examples models previously published (hemato-toxicity and integrated glucose-insulin model). The avatar distribution could be used to assess the appropriateness of the models assumed parameter distribution. Similarly it could be used to assess the models ability to properly describe the trajectories of the observations. Avatars can give nuanced information regarding the ability of a model to simulate data similar to the observations both at the population and at the individual level. Further potential applications for avatars may be as a diagnostic tool, an alternative to simulations with insurance to replicate key clinical features, and as an individual measure of model fit.
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Affiliation(s)
- Estelle Chasseloup
- Department of Pharmacy, Uppsala University, Box 580, Uppsala, 75123, Sweden
| | - Andrew C Hooker
- Department of Pharmacy, Uppsala University, Box 580, Uppsala, 75123, Sweden
| | - Mats O Karlsson
- Department of Pharmacy, Uppsala University, Box 580, Uppsala, 75123, Sweden.
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Mahmood K, Shamshad S, Saleem MA, Kharel R, Das AK, Shetty S, Rodrigues JJPC. Blockchain and PUF-based secure key establishment protocol for cross-domain digital twins in industrial Internet of Things architecture. J Adv Res 2023:S2090-1232(23)00266-7. [PMID: 37777064 DOI: 10.1016/j.jare.2023.09.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2023] [Revised: 08/23/2023] [Accepted: 09/20/2023] [Indexed: 10/02/2023] Open
Abstract
INTRODUCTION The Industrial Internet of Things (IIoT) is a technology that connects devices to collect data and conduct in-depth analysis to provide value-added services to industries. The integration of the physical and digital domains is crucial for unlocking the full potential of the IIoT, and digital twins can facilitate this integration by providing a virtual representation of real-world entities. OBJECTIVES By combining digital twins with the IIoT, industries can simulate, predict, and control physical behaviors, enabling them to achieve broader value and support industry 4.0 and 5.0. Constituents of cooperative IIoT domains tend to interact and collaborate during their complicated operations. METHODS To secure such interaction and collaborations, we introduce a blockchain-based cross-domain authentication protocol for IIoT. The blockchain maintains only each domain's dynamic accumulator, which accumulates crucial materials derived from devices, decreasing the overhead. In addition, we use the on-chain accumulator to effectively validate the unlinkable identities of cross-domain IIoT devices. RESULTS The implementation of the concept reveals the fact that our protocol is efficient and reliable. This efficiency and reliability of our protocol is also substantiated through comparison with state-of-the-art literature. In contrast to related protocols, our protocol exhibits a minimum 22.67% increase in computation cost efficiency and a 16.35% rise in communication cost efficiency. CONCLUSION The developed protocol guarantees data transfer security across the domain and thwarts IoT devices from potential physical attacks. Additionally, in order to protect privacy, anonymity and unlinkability are also guaranteed.
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Affiliation(s)
- Khalid Mahmood
- School of Psychology and Computer Science, University of Central Lancashire, Preston, United Kingdom; Graduate School of Intelligent Data Science, National Yunlin University of Science and Technology, Yunlin 64002, Taiwan, ROC.
| | - Salman Shamshad
- Department of Software Engineering, The University of Lahore, Lahore 54590, Pakistan.
| | - Muhammad Asad Saleem
- Department of Computer Science, University of Sahiwal, Sahiwal 57000, Punjab, Pakistan.
| | - Rupak Kharel
- School of Psychology and Computer Science, University of Central Lancashire, Preston, United Kingdom.
| | - Ashok Kumar Das
- Center for Security, Theory and Algorithmic Research, International Institute of Information Technology, Hyderabad 500 032, India.
| | - Sachin Shetty
- Department of Modeling, Simulation and Visualization Engineering, Virginia Modeling, Analysis and Simulation Center, and Center for Cybersecurity Education and Research, Old Dominion University, Suffolk, VA 23435, USA.
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Solís-Lemus JA, Baptiste T, Barrows R, Sillett C, Gharaviri A, Raffaele G, Razeghi O, Strocchi M, Sim I, Kotadia I, Bodagh N, O'Hare D, O'Neill M, Williams SE, Roney C, Niederer S. Evaluation of an open-source pipeline to create patient-specific left atrial models: A reproducibility study. Comput Biol Med 2023; 162:107009. [PMID: 37301099 PMCID: PMC10790305 DOI: 10.1016/j.compbiomed.2023.107009] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 04/11/2023] [Accepted: 05/03/2023] [Indexed: 06/12/2023]
Abstract
This work presents an open-source software pipeline to create patient-specific left atrial models with fibre orientations and a fibrDEFAULTosis map, suitable for electrophysiology simulations, and quantifies the intra and inter observer reproducibility of the model creation. The semi-automatic pipeline takes as input a contrast enhanced magnetic resonance angiogram, and a late gadolinium enhanced (LGE) contrast magnetic resonance (CMR). Five operators were allocated 20 cases each from a set of 50 CMR datasets to create a total of 100 models to evaluate inter and intra-operator variability. Each output model consisted of: (1) a labelled surface mesh open at the pulmonary veins and mitral valve, (2) fibre orientations mapped from a diffusion tensor MRI (DTMRI) human atlas, (3) fibrosis map extracted from the LGE-CMR scan, and (4) simulation of local activation time (LAT) and phase singularity (PS) mapping. Reproducibility in our pipeline was evaluated by comparing agreement in shape of the output meshes, fibrosis distribution in the left atrial body, and fibre orientations. Reproducibility in simulations outputs was evaluated in the LAT maps by comparing the total activation times, and the mean conduction velocity (CV). PS maps were compared with the structural similarity index measure (SSIM). The users processed in total 60 cases for inter and 40 cases for intra-operator variability. Our workflow allows a single model to be created in 16.72 ± 12.25 min. Similarity was measured with shape, percentage of fibres oriented in the same direction, and intra-class correlation coefficient (ICC) for the fibrosis calculation. Shape differed noticeably only with users' selection of the mitral valve and the length of the pulmonary veins from the ostia to the distal end; fibrosis agreement was high, with ICC of 0.909 (inter) and 0.999 (intra); fibre orientation agreement was high with 60.63% (inter) and 71.77% (intra). The LAT showed good agreement, where the median ± IQR of the absolute difference of the total activation times was 2.02 ± 2.45 ms for inter, and 1.37 ± 2.45 ms for intra. Also, the average ± sd of the mean CV difference was -0.00404 ± 0.0155 m/s for inter, and 0.0021 ± 0.0115 m/s for intra. Finally, the PS maps showed a moderately good agreement in SSIM for inter and intra, where the mean ± sd SSIM for inter and intra were 0.648 ± 0.21 and 0.608 ± 0.15, respectively. Although we found notable differences in the models, as a consequence of user input, our tests show that the uncertainty caused by both inter and intra-operator variability is comparable with uncertainty due to estimated fibres, and image resolution accuracy of segmentation tools.
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Affiliation(s)
- José Alonso Solís-Lemus
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK.
| | - Tiffany Baptiste
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Rosie Barrows
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Charles Sillett
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Ali Gharaviri
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK; Centre for Cardiovascular Science, University of Edinburgh, Old College, South Bridge, Edinburgh, EH8 9YL, Scotland, UK
| | - Giulia Raffaele
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK; School of Medical Education, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Orod Razeghi
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK; Department of Haematology, NHS Blood and Transplant Centre, University of Cambridge, Cambridge, UK
| | - Marina Strocchi
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Iain Sim
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Irum Kotadia
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Neil Bodagh
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Daniel O'Hare
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Mark O'Neill
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK
| | - Steven E Williams
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK; Centre for Cardiovascular Science, University of Edinburgh, Old College, South Bridge, Edinburgh, EH8 9YL, Scotland, UK
| | - Caroline Roney
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK; Queen Mary University of London, Mile End Rd, Bethnal Green, London, E1 4NS, UK
| | - Steven Niederer
- School of Biomedical Engineering & Imaging Sciences, King's College London, St Thomas Hospital, London, SE1 7EH, UK; Alan Turing Institute, British Library, 96 Euston Rd, London, NW1 2DB, UK
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Hemdan EED, El-Shafai W, Sayed A. Integrating Digital Twins with IoT-Based Blockchain: Concept, Architecture, Challenges, and Future Scope. Wirel Pers Commun 2023; 131:1-24. [PMID: 37360142 PMCID: PMC10248332 DOI: 10.1007/s11277-023-10538-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 05/21/2023] [Indexed: 06/28/2023]
Abstract
In recent years, there have been concentrations on the Digital Twin from researchers and companies due to its advancement in IT, communication systems, Cloud Computing, Internet-of-Things (IoT), and Blockchain. The main concept of the DT is to provide a comprehensive tangible, and operational explanation of any element, asset, or system. However, it is an extremely dynamic taxonomy developing in complication during the life cycle that produces an enormous quantity of the engendered data and information from them. Likewise, with the development of the Blockchain, the digital twins have the potential to redefine and could be a key strategy to support the IoT-based digital twin's applications for transferring data and value onto the Internet with full transparency besides promising accessibility, trusted traceability, and immutability of transactions. Therefore, the integration of digital twins with the IoT and blockchain technologies has the potential to revolutionize various industries by providing enhanced security, transparency, and data integrity. Thus, this work presents a survey on the innovative theme of digital twins with the integration of Blockchain for various applications. Also, provides challenges and future research directions on this subject. In addition, in this paper, we propose a concept and architecture for integrating digital twins with IoT-based blockchain archives, which allows for real-time monitoring and control of physical assets and processes in a secure and decentralized manner. We also discuss the challenges and limitations of this integration, including issues related to data privacy, scalability, and interoperability. Finally, we provide insights into the future scope of this technology and discuss potential research directions for further improving the integration of digital twins with IoT-based blockchain archives. Overall, this paper provides a comprehensive overview of the potential benefits and challenges of integrating digital twins with IoT-based blockchain and lays the foundation for future research in this area.
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Affiliation(s)
- Ezz El-Din Hemdan
- Department of Computer Science and Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, 32952 Egypt
| | - Walid El-Shafai
- Security Engineering Lab, Computer Science Department, Prince Sultan University, Riyadh, 11586 Saudi Arabia
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, 32952 Egypt
| | - Amged Sayed
- Department of Industrial Electronics and Control Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, 32952 Egypt
- Department of Electrical Energy Engineering, College of Engineering and Technology, Arab Academy for Science Technology & Maritime Transport, Smart Village, Egypt
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Attaran M, Attaran S, Celik BG. The impact of digital twins on the evolution of intelligent manufacturing and Industry 4.0. Adv Comput Intell 2023; 3:11. [PMID: 37305021 PMCID: PMC10246533 DOI: 10.1007/s43674-023-00058-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 05/03/2023] [Accepted: 05/10/2023] [Indexed: 06/13/2023]
Abstract
As the adoption of Industry 4.0 advances and the manufacturing process becomes increasingly digital, the Digital Twin (DT) will prove invaluable for testing and simulating new parameters and design variants. DT solutions build a 3D digital replica of the physical object allowing the managers to develop better products, detect physical issues sooner, and predict outcomes more accurately. In the past few years, Digital Twins (DTs) dramatically reduced the cost of developing new manufacturing approaches, improved efficiency, reduced waste, and minimized batch-to-batch variability. This paper aims to highlight the evolution of DTs, review its enabling technologies, identify challenges and opportunities for implementing DT in Industry 4.0, and examine its range of applications in manufacturing, including smart logistics and supply chain management. The paper also highlights some real examples of the application of DT in manufacturing.
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Affiliation(s)
- Mohsen Attaran
- School of Business and Public Administration, California State University, Bakersfield, 9001 Stockdale Highway, Bakersfield, CA 93311-1099 USA
| | - Sharmin Attaran
- Bryant University, 1150 Douglas Pike, Smithfield, RI 02917 USA
| | - Bilge Gokhan Celik
- School of Engineering Computing and Construction Management, Roger Williams University, One Old Ferry Road, Bristol, RI 02809 USA
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15
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Maleki A, Crispino E, Italia SA, Di Salvatore V, Chiacchio MA, Sips F, Bursi R, Russo G, Maimone D, Pappalardo F. Moving forward through the in silico modeling of multiple sclerosis: Treatment layer implementation and validation. Comput Struct Biotechnol J 2023; 21:3081-3090. [PMID: 37266405 PMCID: PMC10230825 DOI: 10.1016/j.csbj.2023.05.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2023] [Revised: 05/17/2023] [Accepted: 05/18/2023] [Indexed: 06/03/2023] Open
Abstract
Multiple sclerosis is an autoimmune inflammatory disease that affects the central nervous system through chronic demyelination and loss of oligodendrocytes. Since the relapsing-remitting form is the most prevalent, relapse-reducing therapies are a primary choice for specialists. Universal Immune System Simulator is an agent-based model that simulates the human immune system dynamics under physiological conditions and during several diseases, including multiple sclerosis. In this work, we extended the UISS-MS disease layer by adding two new treatments, i.e., cladribine and ocrelizumab, to show that UISS-MS can be potentially used to predict the effects of any existing or newly designed treatment against multiple sclerosis. To retrospectively validate UISS-MS with ocrelizumab and cladribine, we extracted the clinical and MRI data from patients included in two clinical trials, thus creating specific cohorts of digital patients for predicting and validating the effects of the considered drugs. The obtained results mirror those of the clinical trials, demonstrating that UISS-MS can correctly simulate the mechanisms of action and outcomes of the treatments. The successful retrospective validation concurred to confirm that UISS-MS can be considered a digital twin solution to be used as a support system to inform clinical decisions and predict disease course and therapeutic response at a single patient level.
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Affiliation(s)
- Avisa Maleki
- Department of Mathematics and Computer Science, University of Catania, Viale Andrea Doria 6, Catania 95125, Italy
| | - Elena Crispino
- Department of Biomedical and Biotechnological Sciences, University of Catania, Via Santa Sofia 97, Catania 95125, Italy
| | - Serena Anna Italia
- Department of Drug and Health Sciences, University of Catania, Viale Andrea Doria 6, Catania 95125, Italy
| | - Valentina Di Salvatore
- Department of Drug and Health Sciences, University of Catania, Viale Andrea Doria 6, Catania 95125, Italy
| | - Maria Assunta Chiacchio
- Department of Drug and Health Sciences, University of Catania, Viale Andrea Doria 6, Catania 95125, Italy
| | - Fianne Sips
- InSilicoTrials Technologies BV, 's Hertogenbosch, the Netherlands
| | - Roberta Bursi
- InSilicoTrials Technologies BV, 's Hertogenbosch, the Netherlands
| | - Giulia Russo
- Department of Drug and Health Sciences, University of Catania, Viale Andrea Doria 6, Catania 95125, Italy
- Mimesis SRL, Catania, Italy
| | - Davide Maimone
- Centro Sclerosi Multipla, UOC Neurologia, ARNAS Garibaldi, P.zza S. Maria di Gesù, Catania 95124, Italy
| | - Francesco Pappalardo
- Department of Drug and Health Sciences, University of Catania, Viale Andrea Doria 6, Catania 95125, Italy
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Pilleron S, O'Hanlon S. Digital twins for geriatric oncology: Double trouble or twice as nice? J Geriatr Oncol 2023:101524. [PMID: 37208231 DOI: 10.1016/j.jgo.2023.101524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Accepted: 05/08/2023] [Indexed: 05/21/2023]
Affiliation(s)
- Sophie Pilleron
- Ageing, Cancer, and Disparities Research Unit, Department of Precision Health, Luxembourg Institute of Health, 1A-B, rue Thomas Edison, 1445 Strassen, Luxembourg.
| | - Shane O'Hanlon
- Department of Geriatric Medicine, St Vincent's University Hospital, Dublin, Ireland and School of Medicine, University College Dublin, Dublin, Ireland
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Dubs L, Charitatos V, Buoso S, Wegener S, Winklhofer S, Alkadhi H, Kurtcuoglu V. Assessment of extracranial carotid artery disease using digital twins - A pilot study. Neuroimage Clin 2023; 38:103435. [PMID: 37245493 PMCID: PMC10238877 DOI: 10.1016/j.nicl.2023.103435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Revised: 05/05/2023] [Accepted: 05/12/2023] [Indexed: 05/30/2023]
Abstract
To improve risk stratification in extracranial internal carotid artery disease (CAD), patients who would benefit maximally from revascularization must be identified. In cardiology, the fractional flow reserve (FFR) has become a reference standard for evaluating the functional severity of coronary artery stenosis, and noninvasive surrogates thereof relying on computational fluid dynamics (CFD) have been developed. Here, we present a CFD-based workflow using digital twins of patients' carotid bifurcations derived from computed tomography angiography for the noninvasive functional assessment of CAD. We reconstructed patient-specific digital twins of 37 carotid bifurcations. We implemented a CFD model using common carotid artery peak systolic velocity (PSV) acquired with Doppler ultrasound (DUS) as inlet boundary condition and a two-element Windkessel model as oulet boundary condition. The agreement between CFD and DUS on the PSV in the internal carotid artery (ICA) was then compared. The relative error for the agreement between DUS and CFD was 9% ± 20% and the intraclass correlation coefficient was 0.88. Furthermore, hyperemic simulations in a physiological range were feasible and unmasked markedly different pressure drops along two ICA stenoses with similar degree of narrowing under comparable ICA blood flow. Hereby, we lay the foundation for prospective studies on noninvasive CFD-based derivation of metrics similar to the FFR for the assessment of CAD.
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Affiliation(s)
- Linus Dubs
- University of Zurich, Institute of Physiology, The Interface Group, Winterthurerstrasse 190, 8057 Zürich, Switzerland.
| | - Vasileios Charitatos
- University of Zurich, Institute of Physiology, The Interface Group, Winterthurerstrasse 190, 8057 Zürich, Switzerland; University Hospital Zurich, University of Zurich, Institute of Diagnostic and Interventional Radiology, Rämistrasse 100, 8091 Zürich, Switzerland.
| | - Stefano Buoso
- University of Zurich, Institute of Physiology, The Interface Group, Winterthurerstrasse 190, 8057 Zürich, Switzerland; ETH Zurich, Institute for Biomedical Engineering, Gloriastrasse 35, 8092 Zürich, Switzerland.
| | - Susanne Wegener
- University Hospital Zurich, University of Zurich, Clinical Neuroscience Center, Department of Neurology, Frauenklinikstrasse 10, 8091 Zürich, Switzerland.
| | - Sebastian Winklhofer
- University Hospital Zurich, University of Zurich, Clinical Neuroscience Center, Department of Neuroradiology, Frauenklinikstrasse 10, 8091 Zürich, Switzerland.
| | - Hatem Alkadhi
- University Hospital Zurich, University of Zurich, Institute of Diagnostic and Interventional Radiology, Rämistrasse 100, 8091 Zürich, Switzerland.
| | - Vartan Kurtcuoglu
- University of Zurich, Institute of Physiology, The Interface Group, Winterthurerstrasse 190, 8057 Zürich, Switzerland.
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Gonsard A, AbouTaam R, Prévost B, Roy C, Hadchouel A, Nathan N, Taytard J, Pirojoc A, Delacourt C, Wanin S, Drummond D. Children's views on artificial intelligence and digital twins for the daily management of their asthma: a mixed-method study. Eur J Pediatr 2023; 182:877-888. [PMID: 36512148 PMCID: PMC9745267 DOI: 10.1007/s00431-022-04754-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 11/30/2022] [Accepted: 12/05/2022] [Indexed: 12/15/2022]
Abstract
New technologies enable the creation of digital twin systems (DTS) combining continuous data collection from children's home and artificial intelligence (AI)-based recommendations to adapt their care in real time. The objective was to assess whether children and adolescents with asthma would be ready to use such DTS. A mixed-method study was conducted with 104 asthma patients aged 8 to 17 years. The potential advantages and disadvantages associated with AI and the use of DTS were collected in semi-structured interviews. Children were then asked whether they would agree to use a DTS for the daily management of their asthma. The strength of their decision was assessed as well as the factors determining their choice. The main advantages of DTS identified by children were the possibility to be (i) supported in managing their asthma (ii) from home and (iii) in real time. Technical issues and the risk of loss of humanity were the main drawbacks reported. Half of the children (56%) were willing to use a DTS for the daily management of their asthma if it was as effective as current care, and up to 93% if it was more effective. Those with the best computer skills were more likely to choose the DTS, while those who placed a high value on the physician-patient relationship were less likely to do so. Conclusions: The majority of children were ready to use a DTS for the management of their asthma, particularly if it was more effective than current care. The results of this study support the development of DTS for childhood asthma and the evaluation of their effectiveness in clinical trials. What is Known: • New technologies enable the creation of digital twin systems (DTS) for children with asthma. • Acceptance of these DTSs by children with asthma is unknown. What is New: • Half of the children (56%) were willing to use a DTS for the daily management of their asthma if it was as effective as current care, and up to 93% if it was more effective. •Children identified the ability to be supported from home and in real time as the main benefits of DTS.
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Affiliation(s)
- Apolline Gonsard
- Department of Pediatric Pulmonology and Allergology, University Hospital Necker-Enfants Malades, AP-HP, 149 Rue de Sèvres, 75015 Paris, France
| | - Rola AbouTaam
- Department of Pediatric Pulmonology and Allergology, University Hospital Necker-Enfants Malades, AP-HP, 149 Rue de Sèvres, 75015 Paris, France
| | - Blandine Prévost
- Department of Pediatric Pulmonology, University Hospital Armand Trousseau, AP-HP Paris, France
| | - Charlotte Roy
- Department of Pediatric Pulmonology and Allergology, University Hospital Necker-Enfants Malades, AP-HP, 149 Rue de Sèvres, 75015 Paris, France
| | - Alice Hadchouel
- Department of Pediatric Pulmonology and Allergology, University Hospital Necker-Enfants Malades, AP-HP, 149 Rue de Sèvres, 75015 Paris, France
- Université Paris Cité, Paris, France
| | - Nadia Nathan
- Department of Pediatric Pulmonology, University Hospital Armand Trousseau, AP-HP Paris, France
| | - Jessica Taytard
- Department of Pediatric Pulmonology, University Hospital Armand Trousseau, AP-HP Paris, France
- UMRS1158 Neurophysiologie Respiratoire Expérimentale Et Clinique, Sorbonne Université, INSERM, Paris, France
| | | | - Christophe Delacourt
- Department of Pediatric Pulmonology and Allergology, University Hospital Necker-Enfants Malades, AP-HP, 149 Rue de Sèvres, 75015 Paris, France
- Université Paris Cité, Paris, France
| | - Stéphanie Wanin
- Department of Pediatric Allergology, University Hospital Armand Trousseau, APHP, Paris, France
| | - David Drummond
- Department of Pediatric Pulmonology and Allergology, University Hospital Necker-Enfants Malades, AP-HP, 149 Rue de Sèvres, 75015 Paris, France
- Université Paris Cité, Paris, France
- Inserm UMR 1138, Centre de Recherche Des Cordeliers, HeKA Team, 75006 Paris, France
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Peshkova M, Yumasheva V, Rudenko E, Kretova N, Timashev P, Demura T. Digital twin concept: Healthcare, education, research. J Pathol Inform 2023; 14:100313. [PMID: 37168801 PMCID: PMC10165159 DOI: 10.1016/j.jpi.2023.100313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 04/11/2023] [Accepted: 04/12/2023] [Indexed: 05/13/2023] Open
Abstract
Introducing the concept of digital twins in healthcare, medical education, and research is a complex multistage challenge requiring participation of multidisciplinary teams. In pursuing this goal, we have created a validated database of scans of colorectal tumor slides associated with relevant clinical and histological information. This database is also linked to the blood bank, which opens a wide range of opportunities for further research. Herein, we present our experience within the scope of the digital twins initiative.
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Affiliation(s)
- Maria Peshkova
- World-Class Research Center “Digital Biodesign and Personalized Healthcare”, Sechenov University, 119991 Moscow, Russia
- Institute for Regenerative Medicine, Sechenov University, 119991 Moscow, Russia
- Corresponding author.
| | | | - Ekaterina Rudenko
- Institute for Clinical Morphology and Digital Pathology, Sechenov University, 119991 Moscow, Russia
| | - Natalia Kretova
- World-Class Research Center “Digital Biodesign and Personalized Healthcare”, Sechenov University, 119991 Moscow, Russia
- Institute for Clinical Morphology and Digital Pathology, Sechenov University, 119991 Moscow, Russia
| | - Peter Timashev
- World-Class Research Center “Digital Biodesign and Personalized Healthcare”, Sechenov University, 119991 Moscow, Russia
- Institute for Regenerative Medicine, Sechenov University, 119991 Moscow, Russia
- Chemistry Department, Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Tatiana Demura
- Institute for Clinical Morphology and Digital Pathology, Sechenov University, 119991 Moscow, Russia
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20
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Polyviou A, Pappas IO. Chasing Metaverses: Reflecting on Existing Literature to Understand the Business Value of Metaverses. Inf Syst Front 2022; 25:1-22. [PMID: 36589769 PMCID: PMC9789369 DOI: 10.1007/s10796-022-10364-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 12/08/2022] [Indexed: 06/17/2023]
Abstract
Metaverses refer to immersive virtual worlds in which people, places, and things of the physical world are represented by their digital representations. The wide adoption of metaverses is expected to widely disrupt the way we interact in the virtual world by elevating our online interactive experiences and bringing a plethora of implications for businesses. Following a structured literature review of related research published in the last decade, we shed light on our current understanding of metaverses and reflect on the potentially transformative value of metaverses for businesses in the near future. We draw on an established research framework to organize the insights of existing literature across different levels of analysis and activities' purpose. Through this analysis, we reveal eight propositions on the changes brought by the use of metaverses and identify a number of open questions which could serve as future research avenues.
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Affiliation(s)
- Ariana Polyviou
- Department of Management, School of Business, University of Nicosia, 2417 Nicosia, Cyprus
| | - Ilias O. Pappas
- Department of Information Systems, University of Agder, Universitetsveien 25, 4604 Kristiansand, Norway
- Department of Computer Science, Norwegian University of Science and Technology, Trondheim, Norway
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21
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Wu W, Malik MK, Cantero-Chinchilla S, Lawrie T, Yan WJ, Tanner G, Remenyte-Prescott R, Chronopoulos D. Guided waves-based damage identification in plates through an inverse Bayesian process. Ultrasonics 2022; 125:106773. [PMID: 35688013 DOI: 10.1016/j.ultras.2022.106773] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Revised: 05/11/2022] [Accepted: 05/18/2022] [Indexed: 06/15/2023]
Abstract
The use of guided waves to identify damage has become a popular method due to its robustness and fast execution, as well as the advantage of being able to inspect large areas and detect minor structural defects. When a travelling wave on a plate interacts with a defect, it generates a scattered field that will depend on the defects geometry. By analysing the scattered field, one can thus characterize the type and size of the plate damage. A Bayesian framework based on a guided waves interaction model for damage identification of infinite plate for the first time is presented here. A semi-analytical approach based on the lowest order plate theories is adopted to obtain the scattering features for damage geometries with circular symmetry, resulting in an efficient inversion procedure. Subsequently, ultrasound experiments are performed on a large aluminium plate with a circular indentation to generate wave reflection and transmission coefficients. With the aid of signal processing techniques, the effectiveness and efficiency of the proposed approach are verified. A full finite element model is used to test the damage identification scheme. Finally, the scattering coefficients are reconstructed, reliably matching the experimental results. The framework supports digital twin technology of structural health monitoring.
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Affiliation(s)
- W Wu
- Institute for Aerospace Technology & The Composites Group, The University of Nottingham, NG7 2RD, United Kingdom.
| | - M K Malik
- Institute for Aerospace Technology & The Composites Group, The University of Nottingham, NG7 2RD, United Kingdom; Aernnova Engineering Division S.A., Madrid, 28034, Spain.
| | - S Cantero-Chinchilla
- Department of Mechanical Engineering, University of Bristol, Bristol, BS8 1TR, UK
| | - T Lawrie
- School of Mathematical Sciences, University of Nottingham, NG7 2RD, United Kingdom
| | - W J Yan
- State Key Laboratory of Internet of Things for Smart City and Department of Civil and Environmental Engineering, University of Macau, China
| | - G Tanner
- School of Mathematical Sciences, University of Nottingham, NG7 2RD, United Kingdom
| | - R Remenyte-Prescott
- Resilience Engineering Research Group, Faculty of Engineering, University of Nottingham, University Park, Nottingham, NG7 2RD, United Kingdom
| | - D Chronopoulos
- KU Leuven, Department of Mechanical Engineering & Mecha(tro)nic System Dynamics (LMSD), 9000, Belgium
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Quilodrán-Casas C, Silva VLS, Arcucci R, Heaney CE, Guo Y, Pain CC. Digital twins based on bidirectional LSTM and GAN for modelling the COVID-19 pandemic. Neurocomputing 2022; 470:11-28. [PMID: 34703079 PMCID: PMC8531233 DOI: 10.1016/j.neucom.2021.10.043] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Revised: 08/04/2021] [Accepted: 10/19/2021] [Indexed: 01/09/2023]
Abstract
The outbreak of the coronavirus disease 2019 (COVID-19) has now spread throughout the globe infecting over 150 million people and causing the death of over 3.2 million people. Thus, there is an urgent need to study the dynamics of epidemiological models to gain a better understanding of how such diseases spread. While epidemiological models can be computationally expensive, recent advances in machine learning techniques have given rise to neural networks with the ability to learn and predict complex dynamics at reduced computational costs. Here we introduce two digital twins of a SEIRS model applied to an idealised town. The SEIRS model has been modified to take account of spatial variation and, where possible, the model parameters are based on official virus spreading data from the UK. We compare predictions from one digital twin based on a data-corrected Bidirectional Long Short-Term Memory network with predictions from another digital twin based on a predictive Generative Adversarial Network. The predictions given by these two frameworks are accurate when compared to the original SEIRS model data. Additionally, these frameworks are data-agnostic and could be applied to towns, idealised or real, in the UK or in other countries. Also, more compartments could be included in the SEIRS model, in order to study more realistic epidemiological behaviour.
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Affiliation(s)
- César Quilodrán-Casas
- Data Science Institute, Department of Computing, Imperial College London, UK
- Department of Earth Science & Engineering, Imperial College London, UK
| | | | - Rossella Arcucci
- Data Science Institute, Department of Computing, Imperial College London, UK
- Department of Earth Science & Engineering, Imperial College London, UK
| | - Claire E Heaney
- Department of Earth Science & Engineering, Imperial College London, UK
| | - YiKe Guo
- Data Science Institute, Department of Computing, Imperial College London, UK
| | - Christopher C Pain
- Data Science Institute, Department of Computing, Imperial College London, UK
- Department of Earth Science & Engineering, Imperial College London, UK
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23
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Blakseth SS, Rasheed A, Kvamsdal T, San O. Deep neural network enabled corrective source term approach to hybrid analysis and modeling. Neural Netw 2021; 146:181-199. [PMID: 34894481 DOI: 10.1016/j.neunet.2021.11.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Revised: 11/14/2021] [Accepted: 11/19/2021] [Indexed: 11/30/2022]
Abstract
In this work, we introduce, justify and demonstrate the Corrective Source Term Approach (CoSTA)-a novel approach to Hybrid Analysis and Modeling (HAM). The objective of HAM is to combine physics-based modeling (PBM) and data-driven modeling (DDM) to create generalizable, trustworthy, accurate, computationally efficient and self-evolving models. CoSTA achieves this objective by augmenting the governing equation of a PBM model with a corrective source term generated using a deep neural network. In a series of numerical experiments on one-dimensional heat diffusion, CoSTA is found to outperform comparable DDM and PBM models in terms of accuracy - often reducing predictive errors by several orders of magnitude - while also generalizing better than pure DDM. Due to its flexible but solid theoretical foundation, CoSTA provides a modular framework for leveraging novel developments within both PBM and DDM. Its theoretical foundation also ensures that CoSTA can be used to model any system governed by (deterministic) partial differential equations. Moreover, CoSTA facilitates interpretation of the DNN-generated source term within the context of PBM, which results in improved explainability of the DNN. These factors make CoSTA a potential door-opener for data-driven techniques to enter high-stakes applications previously reserved for pure PBM.
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Affiliation(s)
| | - Adil Rasheed
- Department of Engineering Cybernetics, Norwegian University of Science and Technology, Norway; Mathematics and Cybernetics, SINTEF Digital, Norway.
| | - Trond Kvamsdal
- Department of Mathematical Sciences, Norwegian University of Science and Technology, Norway; Mathematics and Cybernetics, SINTEF Digital, Norway.
| | - Omer San
- School of Mechanical and Aerospace Engineering, Oklahoma State University, United States of America.
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24
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Hernigou P, Olejnik R, Safar A, Martinov S, Hernigou J, Ferre B. Digital twins, artificial intelligence, and machine learning technology to identify a real personalized motion axis of the tibiotalar joint for robotics in total ankle arthroplasty. Int Orthop 2021; 45:2209-2217. [PMID: 34351462 DOI: 10.1007/s00264-021-05175-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 07/24/2021] [Accepted: 07/28/2021] [Indexed: 01/19/2023]
Abstract
PURPOSE Axial alignment of the talar implant in total ankle arthroplasty remains a major issue, since the real axis of motion of each patient is impossible to determine with usual techniques. Further knowledge regarding individual axis of motion of the ankle is therefore needed. MATERIAL AND METHODS Therefore, digital twins, artificial intelligence, and machine learning technology were used to identify a real personalized motion axis of the tibiotalar joint. Three-dimensional (3D) models of distal extremities were generated using computed tomography data of normal patients. Digital twins were used to reproduce the mobility of the ankles, and the real ankle of the patients was matched to the digital twin with machine learning technology. RESULTS The results showed that a personalized axis can be obtained for each patient. When the origin of the axis is the centre of mass of the talus, this axis can be represented in a geodesic system. The mean value of the axis is a line passing in first approximation through the centre of the sphere (with a variation of 3 mm from the centre of the mass of the talus) and through a point with the coordinates 91.6° west and 7.4° north (range 84° to 98° west; - 2° to 12° north). This study improves the understanding of the axis of the ankle, as well as its relationship to the possibility to use the geodesic system for robotic in ankle arthroplasty. CONCLUSION The consideration of a personalized axis of the ankle might be helpful for better understanding of ankle surgery and particularly total ankle arthroplasty.
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Affiliation(s)
- Philippe Hernigou
- Orthopedic Department Henri Mondor Hospital, University Paris East, Paris, France.
| | - Romain Olejnik
- Orthopedic Department Henri Mondor Hospital, University Paris East, Paris, France
| | - Adonis Safar
- Orthopedic Department, EpiCURA Baudour Hornu Hospital, Mons, Belgium
| | - Sagi Martinov
- Orthopedic Department, EpiCURA Baudour Hornu Hospital, Mons, Belgium
| | - Jacques Hernigou
- Orthopedic Department, EpiCURA Baudour Hornu Hospital, Mons, Belgium
| | - Bruno Ferre
- Institut Monégasque de Médecine & Chirurgie Sportive, 98000, Monaco, Monaco
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25
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Leng J, Zhou M, Xiao Y, Zhang H, Liu Q, Shen W, Su Q, Li L. Digital twins-based remote semi-physical commissioning of flow-type smart manufacturing systems. J Clean Prod 2021; 306:127278. [PMID: 35035124 PMCID: PMC8740749 DOI: 10.1016/j.jclepro.2021.127278] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 03/25/2021] [Accepted: 04/22/2021] [Indexed: 06/14/2023]
Abstract
The COVID-19 has become a global pandemic that dramatically impacted human lives and economic activities. Due to the high risk of getting affected in high-density population areas and the implementation of national emergency measures under the COVID-19 pandemic, both travel and transportation among cities become difficult for engineers and equipment. Consequently, the costly physical commissioning of a new manufacturing system is greatly hindered. As an emerging technology, digital twins can achieve semi-physical simulation to avoid the vast cost of physical commissioning of the manufacturing system. Therefore, this paper proposes a digital twins-based remote semi-physical commissioning (DT-RSPC) approach for open architecture flow-type smart manufacturing systems. A digital twin system is developed to enable the remote semi-physical commissioning. The proposed approach is validated through a case study of digital twins-based remote semi-physical commissioning of a smartphone assembly line. The results showed that combining the open architecture design paradigm with the proposed digital twins-based approach makes the commissioning of a new flow-type smart manufacturing system more sustainable.
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Affiliation(s)
- Jiewu Leng
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
- Department of Information Systems, City University of Hong Kong, 999077, Hong Kong, China
| | - Man Zhou
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
| | - Yuxuan Xiao
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
| | - Hu Zhang
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
| | - Qiang Liu
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
| | - Weiming Shen
- State Key Laboratory of Digital Manufacturing Equipment and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Qianyi Su
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
| | - Longzhang Li
- Guangdong Provincial Key Laboratory of Computer Integrated Manufacturing System, State Key Laboratory of Precision Electronic Manufacturing Technology and Equipment, Guangdong University of Technology, Guangzhou, 510006, China
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26
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Hajian CSS, Zieringer J, Takors R. Euler-Lagrangian Simulations: A Proper Tool for Predicting Cellular Performance in Industrial Scale Bioreactors. Adv Biochem Eng Biotechnol 2021; 177:229-54. [PMID: 32978650 DOI: 10.1007/10_2020_133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register]
Abstract
Eulerian-Lagrangian approach to investigate cellular responses in a bioreactor has become the center of attention in recent years. It was introduced to biotechnological processes about two decades ago, but within the last few years, it proved itself as a powerful tool to address scale-up and -down topics of bioprocesses. It can capture the history of a cell and reveal invaluable information for, not only, bioprocess control and design but also strain engineering. This way it will be possible to shed light on the actual environment that cell experiences throughout its lifespan. Lifelines of a microorganism in a bioreactor can serve as the missing link that encompasses the biological timescales and the physical timescales. For this purpose digitalization of bioreactors provides us with new insights that are not achievable in industrial reactors easily if at all, namely, substrate and product gradients; high-shear regions are among the most interesting factors that can be reproduced adequately with help of a digital twin. In this chapter basic principles of this method will be introduced, and later on some practical aspects of particle tracking technique will be illustrated. In the final section, some of the advantages and challenges associated with this method will be discussed.
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27
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Visconti E, Tsigkanos C, Hu Z, Ghezzi C. Model-driven engineering city spaces via bidirectional model transformations. Softw Syst Model 2021; 20:2003-2022. [PMID: 34924920 PMCID: PMC8645541 DOI: 10.1007/s10270-020-00851-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/01/2020] [Revised: 11/23/2020] [Accepted: 12/07/2020] [Indexed: 06/14/2023]
Abstract
Engineering cyber-physical systems inhabiting contemporary urban spatial environments demands software engineering facilities to support design and operation. Tools and approaches in civil engineering and architectural informatics produce artifacts that are geometrical or geographical representations describing physical spaces. The models we consider conform to the CityGML standard; although relying on international standards and accessible in machine-readable formats, such physical space descriptions often lack semantic information that can be used to support analyses. In our context, analysis as commonly understood in software engineering refers to reasoning on properties of an abstracted model-in this case a city design. We support model-based development, firstly by providing a way to derive analyzable models from CityGML descriptions, and secondly, we ensure that changes performed are propagated correctly. Essentially, a digital twin of a city is kept synchronized, in both directions, with the information from the actual city. Specifically, our formal programming technique and accompanying technical framework assure that relevant information added, or changes applied to the domain (resp. analyzable) model are reflected back in the analyzable (resp. domain) model automatically and coherently. The technique developed is rooted in the theory of bidirectional transformations, which guarantees that synchronization between models is consistent and well behaved. Produced models can bootstrap graph-theoretic, spatial or dynamic analyses. We demonstrate that bidirectional transformations can be achieved in practice on real city models.
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28
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Zhou C, Chase JG, Knopp J, Sun Q, Tawhai M, Möller K, Heines SJ, Bergmans DC, Shaw GM, Desaive T. Virtual patients for mechanical ventilation in the intensive care unit. Comput Methods Programs Biomed 2021; 199:105912. [PMID: 33360683 DOI: 10.1016/j.cmpb.2020.105912] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Accepted: 12/12/2020] [Indexed: 06/12/2023]
Abstract
BACKGROUND Mechanical ventilation (MV) is a core intensive care unit (ICU) therapy. Significant inter- and intra- patient variability in lung mechanics and condition makes managing MV difficult. Accurate prediction of patient-specific response to changes in MV settings would enable optimised, personalised, and more productive care, improving outcomes and reducing cost. This study develops a generalised digital clone model, or in-silico virtual patient, to accurately predict lung mechanics in response to changes in MV. METHODS An identifiable, nonlinear hysteresis loop model (HLM) captures patient-specific lung dynamics identified from measured ventilator data. Identification and creation of the virtual patient model is fully automated using the hysteresis loop analysis (HLA) method to identify lung elastances from clinical data. Performance is evaluated using clinical data from 18 volume-control (VC) and 14 pressure-control (PC) ventilated patients who underwent step-wise recruitment maneuvers. RESULTS Patient-specific virtual patient models accurately predict lung response for changes in PEEP up to 12 cmH2O for both volume and pressure control cohorts. R2 values for predicting peak inspiration pressure (PIP) and additional retained lung volume, Vfrc in VC, are R2=0.86 and R2=0.90 for 106 predictions over 18 patients. For 14 PC patients and 84 predictions, predicting peak inspiratory volume (PIV) and Vfrc yield R2=0.86 and R2=0.83. Absolute PIP, PIV and Vfrc errors are relatively small. CONCLUSIONS Overall results validate the accuracy and versatility of the virtual patient model for capturing and predicting nonlinear changes in patient-specific lung mechanics. Accurate response prediction enables mechanically and physiologically relevant virtual patients to guide personalised and optimised MV therapy.
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Affiliation(s)
- Cong Zhou
- School of Civil Aviation, Northwestern Polytechnical University, China; Department of Mechanical Engineering, University of Canterbury, New Zealand
| | - J Geoffrey Chase
- Department of Mechanical Engineering, University of Canterbury, New Zealand.
| | - Jennifer Knopp
- Department of Mechanical Engineering, University of Canterbury, New Zealand
| | - Qianhui Sun
- Department of Mechanical Engineering, University of Canterbury, New Zealand
| | - Merryn Tawhai
- Auckland Bio-Engineering Institute (ABI), University of Auckland, New Zealand
| | - Knut Möller
- Institute for Technical Medicine, Furtwangen University, Villingen-Schwenningen, Germany
| | - Serge J Heines
- Department of Intensive Care, School of Medicine, Maastricht University, Maastricht, the Netherlands
| | - Dennis C Bergmans
- Department of Intensive Care, School of Medicine, Maastricht University, Maastricht, the Netherlands
| | - Geoffrey M Shaw
- Department of Intensive Care, Christchurch Hospital, Christchurch, New Zealand
| | - Thomas Desaive
- GIGA-In Silico Medicine, Institute of Physics, University of Liege, Liege, Belgium
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29
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Bideault G, Scaccia A, Zahel T, Landertinger RW, Daluwatte C. Verification and Validation of Computational Models Used in Biopharmaceutical Manufacturing: Potential Application of the ASME Verification and Validation 40 Standard and FDA Proposed AI/ML Model Life Cycle Management Framework. J Pharm Sci 2021; 110:1540-1544. [PMID: 33493480 DOI: 10.1016/j.xphs.2021.01.016] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 12/18/2020] [Accepted: 01/14/2021] [Indexed: 11/18/2022]
Abstract
A wide variety of computational models covering statistical, mechanistic, and machine learning (locked and adaptive) methods are explored for use in biopharmaceutical manufacturing. Limited discussion exists on how to establish the credibility of a computational model for application in biopharmaceutical manufacturing. In this work, we tried to use the American Society of Mechanical Engineers (ASME) Verification and Validation 40 (V&V 40) standard and FDA proposed AI/ML model life cycle management framework for Software as a Medical Device (SaMD) in biopharmaceutical manufacturing use cases, by applying to a set of curated hypothetical examples. We discussed the need for standardized frameworks to facilitate consistent decision making to enable efficient adoption of computational models in biopharmaceutical manufacturing and alignment of existing good practices with existing frameworks. In the study of our examples, we anticipate existing frameworks like V&V 40 can be adopted.
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30
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Gargalo CL, de Las Heras SC, Jones MN, Udugama I, Mansouri SS, Krühne U, Gernaey KV. Towards the Development of Digital Twins for the Bio-manufacturing Industry. Adv Biochem Eng Biotechnol 2020; 176:1-34. [PMID: 33349908 DOI: 10.1007/10_2020_142] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
The bio-manufacturing industry, along with other process industries, now has the opportunity to be engaged in the latest industrial revolution, also known as Industry 4.0. To successfully accomplish this, a physical-to-digital-to-physical information loop should be carefully developed. One way to achieve this is, for example, through the implementation of digital twins (DTs), which are virtual copies of the processes. Therefore, in this paper, the focus is on understanding the needs and challenges faced by the bio-manufacturing industry when dealing with this digitalized paradigm. To do so, two major building blocks of a DT, data and models, are highlighted and discussed. Hence, firstly, data and their characteristics and collection strategies are examined as well as new methods and tools for data processing. Secondly, modelling approaches and their potential of being used in DTs are reviewed. Finally, we share our vision with regard to the use of DTs in the bio-manufacturing industry aiming at bringing the DT a step closer to its full potential and realization.
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Affiliation(s)
- Carina L Gargalo
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, Denmark
| | | | - Mark Nicholas Jones
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, Denmark.,Molecular Quantum Solutions ApS, Copenhagen, Denmark
| | - Isuru Udugama
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, Denmark
| | - Seyed Soheil Mansouri
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, Denmark
| | - Ulrich Krühne
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, Denmark
| | - Krist V Gernaey
- Department of Chemical and Biochemical Engineering, Technical University of Denmark, Lyngby, Denmark.
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31
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Yeo HC, Hong J, Lakshmanan M, Lee DY. Enzyme capacity-based genome scale modelling of CHO cells. Metab Eng 2020; 60:138-147. [PMID: 32330653 DOI: 10.1016/j.ymben.2020.04.005] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 03/21/2020] [Accepted: 04/14/2020] [Indexed: 10/24/2022]
Abstract
Chinese hamster ovary (CHO) cells are most prevalently used for producing recombinant therapeutics in biomanufacturing. Recently, more rational and systems approaches have been increasingly exploited to identify key metabolic bottlenecks and engineering targets for cell line engineering and process development based on the CHO genome-scale metabolic model which mechanistically characterizes cell culture behaviours. However, it is still challenging to quantify plausible intracellular fluxes and discern metabolic pathway usages considering various clonal traits and bioprocessing conditions. Thus, we newly incorporated enzyme kinetic information into the updated CHO genome-scale model (iCHO2291) and added enzyme capacity constraints within the flux balance analysis framework (ecFBA) to significantly reduce the flux variability in biologically meaningful manner, as such improving the accuracy of intracellular flux prediction. Interestingly, ecFBA could capture the overflow metabolism under the glucose excess condition where the usage of oxidative phosphorylation is limited by the enzyme capacity. In addition, its applicability was successfully demonstrated via a case study where the clone- and media-specific lactate metabolism was deciphered, suggesting that the lactate-pyruvate cycling could be beneficial for CHO cells to efficiently utilize the mitochondrial redox capacity. In summary, iCHO2296 with ecFBA can be used to confidently elucidate cell cultures and effectively identify key engineering targets, thus guiding bioprocess optimization and cell engineering efforts as a part of digital twin model for advanced biomanufacturing in future.
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Affiliation(s)
- Hock Chuan Yeo
- Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01, 138668, Singapore; Department of Chemical and Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, 117585, Singapore
| | - Jongkwang Hong
- Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01, 138668, Singapore
| | - Meiyappan Lakshmanan
- Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01, 138668, Singapore.
| | - Dong-Yup Lee
- Bioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01, 138668, Singapore; School of Chemical Engineering, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, Suwon, Gyeonggi-do, 16419, Republic of Korea.
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32
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Eifert T, Eisen K, Maiwald M, Herwig C. Current and future requirements to industrial analytical infrastructure-part 2: smart sensors. Anal Bioanal Chem 2020; 412:2037-2045. [PMID: 32055909 PMCID: PMC7072042 DOI: 10.1007/s00216-020-02421-1] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Revised: 12/24/2019] [Accepted: 01/14/2020] [Indexed: 11/28/2022]
Abstract
Complex processes meet and need Industry 4.0 capabilities. Shorter product cycles, flexible production needs, and direct assessment of product quality attributes and raw material attributes call for an increased need of new process analytical technologies (PAT) concepts. While individual PAT tools may be available since decades, we need holistic concepts to fulfill above industrial needs. In this series of two contributions, we want to present a combined view on the future of PAT (process analytical technology), which is projected in smart labs (Part 1) and smart sensors (Part 2). Part 2 of this feature article series describes the future functionality as well as the ingredients of a smart sensor aiming to eventually fuel full PAT functionality. The smart sensor consists of (i) chemical and process information in the physical twin by smart field devices, by measuring multiple components, and is fully connected in the IIoT 4.0 environment. In addition, (ii) it includes process intelligence in the digital twin, as to being able to generate knowledge from multi-sensor and multi-dimensional data. The cyber-physical system (CPS) combines both elements mentioned above and allows the smart sensor to be self-calibrating and self-optimizing. It maintains its operation autonomously. Furthermore, it allows—as central PAT enabler—a flexible but also target-oriented predictive control strategy and efficient process development and can compensate variations of the process and raw material attributes. Future cyber-physical production systems—like smart sensors—consist of the fusion of two main pillars, the physical and the digital twins. We discuss the individual elements of both pillars, such as connectivity, and chemical analytics on the one hand as well as hybrid models and knowledge workflows on the other. Finally, we discuss its integration needs in a CPS in order to allow its versatile deployment in efficient process development and advanced optimum predictive process control.
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Affiliation(s)
- Tobias Eifert
- Arbeitskreis Prozessanalytik, Gesellschaft Deutscher Chemiker, 60486, Frankfurt am Main, Germany.,Covestro Deutschland AG, /Uerdingen, 47829, Krefeld, Germany
| | - Kristina Eisen
- Arbeitskreis Prozessanalytik, Gesellschaft Deutscher Chemiker, 60486, Frankfurt am Main, Germany.,Daiichi Sankyo Europe GmbH, 81379, Munich, Germany
| | - Michael Maiwald
- Arbeitskreis Prozessanalytik, Gesellschaft Deutscher Chemiker, 60486, Frankfurt am Main, Germany.,Bundesanstalt für Materialforschung und -prüfung (BAM), 12489, Berlin, Germany
| | - Christoph Herwig
- Arbeitskreis Prozessanalytik, Gesellschaft Deutscher Chemiker, 60486, Frankfurt am Main, Germany. .,ICEBE, Research Area Biochemical Engineering, TU Wien, 1060, Vienna, Austria.
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33
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Scheper T, Beutel S, McGuinness N, Heiden S, Oldiges M, Lammers F, Reardon KF. Digitalization and Bioprocessing: Promises and Challenges. Adv Biochem Eng Biotechnol 2020; 176:57-69. [PMID: 32865594 DOI: 10.1007/10_2020_139] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The production of pharmaceuticals, industrial chemicals, and food ingredients from biotechnological processes is a vast and rapidly growing industry. While advances in synthetic biology and metabolic engineering have made it possible to produce thousands of new molecules from cells, few of these molecules have reached the market. The traditional methods of strain and bioprocess development that transform laboratory results to industrial processes are slow and use computers and networks only for data acquisition and storage. Digitalization, machine learning (ML), and artificial intelligence (AI) methods are transforming many fields - how can they be applied to bioprocessing to overcome current bottlenecks? What are the challenges, especially for regulatory issues, in the production of biopharmaceuticals? This chapter begins with a discussion of the current challenges for strain and bioprocess development and then considers how digitalization can be used to approach these tasks in completely new ways. Finally, regulatory considerations are addressed, with the goal of incorporating these issues from the outset as new digitalization methods are created.
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Affiliation(s)
- Thomas Scheper
- Institute of Technical Chemistry, Leibniz University Hannover, Hannover, Germany.
| | - Sascha Beutel
- Institute of Technical Chemistry, Leibniz University Hannover, Hannover, Germany
| | - Nina McGuinness
- Institute of Technical Chemistry, Leibniz University Hannover, Hannover, Germany
| | - Stefanie Heiden
- Institute for Research on Innovation, Technology Management and Entrepreneurship, Leibniz University Hannover, Hannover, Germany
| | - Marco Oldiges
- Forschungszentrum Jülich GmbH, Institute of Bio- and Geoscience, IBG-1: Biotechnologys, Jülich, Germany
- RWTH Aachen University, Institute of Biotechnology, Aachen, Germany
| | - Frank Lammers
- Sanofi-Aventis Deutschland GmbH, Industriepark Hoechst, Frankfurt am Main, Germany
| | - Kenneth F Reardon
- Department of Chemical and Biological Engineering, Colorado State University, Fort Collins, CO, USA
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