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Yu H, Zhang P, Chen H, Yao Y, Zhao L, Zhao M, Zhu L, Sun H. Porous polypyrrole with a vesicle-like structure for efficient removal of per- and polyfluoroalkyl substances from water: Crucial role of porosity and morphology. J Hazard Mater 2024; 462:132748. [PMID: 37839383 DOI: 10.1016/j.jhazmat.2023.132748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Revised: 09/29/2023] [Accepted: 10/07/2023] [Indexed: 10/17/2023]
Abstract
Herein, a vesicle-like and porous polypyrrole (pPPy) was fabricated by in suit self-template method to efficiently capture per- and polyfluoroalkyl substances (PFASs) and the important role of porosity and morphology in PFAS removal was explored. Compared to solid PPy (sPPy), the porosity and vesicle-like morphology of pPPy endowed it with excellent properties such as large specific surface area (108.9 m2/g vs. 22.3 m2/g), suitable pore sizes (17.4 nm), dispersity, and high hydrophilicity, which facilitated mass transfer and enhanced PFAS sorption performance. The estimated sorption capacities of pPPy for perfluorooctanoic acid (PFOA) and perfluorooctanesulfonate (PFOS) were 509 mg/g and 532 mg/g, respectively, which were ∼2 times higher than sPPy. Furthermore, pPPy demonstrated PFAS removal of ≥ 90% across a wide pH range (3-9) and varying humic acid concentrations (0-50 mg/L). In actual water matrices, pPPy efficiently removed 12 short-chain (C-F number: 3-6) and long-chain PFASs (>90% removal for major PFASs), outperforming sPPy by ∼1.2-2.5 times. Notably, the enlarged porosity and regular morphology of pPPy significantly enhanced the removal of short-chain PFASs by ∼2 times. The spent pPPy could be regenerated and reused over 5 times. This research provides valuable insights for designing efficient PFAS sorbents by emphasizing control over porosity and morphology.
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Affiliation(s)
- Hao Yu
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Peng Zhang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Hao Chen
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Yiming Yao
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Leicheng Zhao
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Maoshen Zhao
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Lingyan Zhu
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Hongwen Sun
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
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Chen W, Liu Y, Qu D, Zheng M, Lang Q, Zhu S, Zhu Z. Effect of pores on microscopic wear properties and deformation behavior of Ni-Cr alloy coating. J Mol Model 2023; 29:330. [PMID: 37776332 DOI: 10.1007/s00894-023-05734-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 09/22/2023] [Indexed: 10/02/2023]
Abstract
CONTEXT Molecular dynamics (MD) was carried out to simulate the friction behavior of Ni-Cr alloy coating containing pores. The mechanical properties, displacement, abrasion depth, and defect change patterns of the coating under nano-friction were studied. It was found that the stacking fault would extend to the pores, and both tangential and normal forces decreased when the grinding ball was above the pores. Meanwhile, the pores changed the extension direction of shear strain inside the coating, and stress concentrations were generated at the pores. In addition, the deformation behavior inside the coating was influenced by the processing depth, the smaller the relative height of the grinding ball and the pore, the greater the atomic deformation around the pore. The pores changed the path of atomic movement, resulting in less deformation of the coating below the pores. The presence of pores promoted the generation of surface steps and increased the amount of wear on the coating. It was also found that pores facilitated energy release and provided space for dislocation extension, and the large accumulation of dislocations led to frictional strengthening near the pores, which enhanced the properties of the material below the pores. It was found that the increase of the pore size caused the normal force decrease and the wear performance of the coating decrease, but the thermal insulation performance would be improved. METHODS In this paper, nanoscale modeling was performed in the large-scale atomic/molecular parallel simulator (LAMMPS) simulation environment. The model was visualized and analyzed in three dimensions by Open Visualization Tool (OVITO), the common neighbor analysis (CNA) method was used to obtain the atomic structure information, and the dislocation analysis (DXA) method was applied to obtain the dislocations.
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Affiliation(s)
- Weihua Chen
- School of Mechanical and Electrical Engineering, Lanzhou University of Technology, Lanzhou, 730050, China
| | - Yanjie Liu
- School of Mechanical and Electrical Engineering, Lanzhou University of Technology, Lanzhou, 730050, China
| | - Dingfeng Qu
- School of Mechanical and Electrical Engineering, Lanzhou University of Technology, Lanzhou, 730050, China
| | - Min Zheng
- School of Mechanical and Electrical Engineering, Lanzhou University of Technology, Lanzhou, 730050, China
| | - Qifa Lang
- School of Mechanical and Electrical Engineering, Lanzhou University of Technology, Lanzhou, 730050, China
| | - Shengyu Zhu
- State Key Laboratory of Solid Lubrication, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000, China
| | - Zongxiao Zhu
- School of Mechanical and Electrical Engineering, Lanzhou University of Technology, Lanzhou, 730050, China.
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3
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Farooq AJ, Chamberlain M, Poonja A, Mumford KG, Wallace S, Weber KP. Peaks, pores, and dragon eggs: Uncovering and quantifying the heterogeneity of treatment wetland biofilm matrices. Sci Total Environ 2023; 855:158857. [PMID: 36126711 DOI: 10.1016/j.scitotenv.2022.158857] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Revised: 08/27/2022] [Accepted: 09/15/2022] [Indexed: 06/15/2023]
Abstract
Biofilms serve to house diverse microbial communities, which are responsible for the majority of wastewater constituent degradation and transformation in treatment wetlands (TWs). TW biofilm has been generally conceptualized as a relatively uniform film covering available surfaces. However, no studies attaining direct visual 3D representations of biofilm morphology have been conducted. This study focuses on imaging the morphology of detached, gravel-associated, and rhizospheric (Phalaris arundinacea) biofilms from subsurface TW mesocosms. Images obtained through both traditional light microscopy, environmental scanning electron microscopy (E-SEM) and Wet-SEM revealed that TW biofilms are structurally heterogeneous ranging from corrugated films to clusters of aggregates. Features such as water channels and pores were observed suggesting that pollutant transport inside biofilms is complex, and that the interfacial surface area between water and biofilm is much larger than previously understood. Biofilm thickness generally ranged between 170 and 240 μm, with internal biofilm porosities estimated as 34 ± 10 %, reaching a maximum of 50 %. Internal biofilm matrix pore diameters ranged from 1 to 205.2 μm, with a distribution that favored pores and channels smaller than 10 μm, and a mean equivalent spherical diameter of 8.6 μm. Based on the large variation in pore and channel sizes it is expected that a variety of flow regimes and therefore pollutant dynamics are likely to occur inside TW biofilm matrices. Based on the visual evidence and analysis, a new conceptual model was created to reflect the microscale TW biofilm dynamics and morphology. This new conceptual model will serve to inform future biokinetic modelling, microscale hydrology, microbial community assessment, and pollutant treatment studies.
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Affiliation(s)
- Anbareen J Farooq
- Environmental Sciences Group, Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON K7K 7B4, Canada
| | - Mhari Chamberlain
- Environmental Sciences Group, Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON K7K 7B4, Canada
| | - Arman Poonja
- Environmental Sciences Group, Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON K7K 7B4, Canada
| | - Kevin G Mumford
- Department of Civil Engineering, Queen's University, Kingston, ON K7L 3N6, Canada
| | - Scott Wallace
- Naturally Wallace Consulting LLC, Pilot Mountain, NC 27041, USA
| | - Kela P Weber
- Environmental Sciences Group, Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON K7K 7B4, Canada.
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Kim F, Yeung H, Garboczi E. Characterizing the effects of laser control in laser powder bed fusion on near-surface pore formation via combined analysis of in-situ melt pool monitoring and X-ray computed tomography. Addit Manuf 2021; 48:10.1016/j.addma.2021.102372. [PMID: 36733468 PMCID: PMC9890601 DOI: 10.1016/j.addma.2021.102372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Near-surface or sub-surface pores are critical to the structural integrity of additively manufactured (AM) metal parts, especially in fatigue failure applications. However, their formation in laser powder bed fusion is not well-understood due to the complex processes happening near the surface, which are challenging to monitor. A lack of high-fidelity data hinders understanding of the process and its effects. It is not well-known that problems with laser control parameters such as galvanometer acceleration and laser power on/off delay can form near-surface pores in laser powder bed fusion (LPBF) AM processes, and we investigated the characteristics of these pores in this research. We also demonstrate the capabilities and processes of combined studies using in-situ melt pool images and ex-situ X-ray computed tomography (XCT) images. Using the National Institute of Standards and Technology (NIST) Additive Manufacturing Metrology Testbed (AMMT), varying laser control schemes were implemented while in-situ coaxial melt pool images were acquired during the build of Nickel superalloy parts. A combination of time-stepped digital commands, in-situ coaxial melt pool monitoring images (≈ 8 μm/pixel), and ex-situ high-resolution XCT images (≈ 3.63 μm/voxel) were demonstrated. Advanced image analysis methods were used to characterize the pores found in terms of size and shape distribution and spatial location. XCT images, in high correspondence to melt pool images, clearly show the effects of the laser control parameters. We present the complete analysis chain of AM command, in-situ melt pool imaging, ex-situ XCT acquisition, and image analysis. Possible near-surface pore formation mechanisms are explained through the comparative image analysis. The approach of compiling combined analyses based on time-stepped digital commands, in-situ monitoring results, and ex-situ XCT measurement through image analysis enables observation and categorization of the different near-surface pore formation mechanisms stemming from laser and scan control.
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Affiliation(s)
- F.H. Kim
- National Institute of Standards and Technology, Intelligent Systems Division, Gaithersburg, MD, USA
| | - H. Yeung
- National Institute of Standards and Technology, Intelligent Systems Division, Gaithersburg, MD, USA
| | - E.J. Garboczi
- National Institute of Standards and Technology, Applied Chemicals and Materials Division, Boulder, CO, USA
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5
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Abstract
Pore forming proteins are released as water-soluble monomers that form-mostly oligomeric-pores in target membranes. Our understanding of such pore formation relies in part on the direct visualization of their assemblies on and in the membrane. Here, we discuss the application of atomic force microscopy (AFM) to visualize and understand membrane pore formation, illustrated specifically by studies of proteins of the MACPF/CDC superfamily on supported lipid bilayers. Besides detailed protocols, we also point out common imaging artefacts and strategies to avoid them, and briefly outline how AFM can be effectively used in conjunction with other methods.
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Affiliation(s)
- Adrian W Hodel
- Killer Cell Biology Laboratory, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia
| | - Katharine Hammond
- National Physical Laboratory, Teddington, United Kingdom; London Centre for Nanotechnology, University College London, London, United Kingdom; Department of Physics & Astronomy, University College London, London, United Kingdom
| | - Bart W Hoogenboom
- London Centre for Nanotechnology, University College London, London, United Kingdom; Department of Physics & Astronomy, University College London, London, United Kingdom.
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Swain DL, Le TD, Yasmin S, Fernandes B, Lamaj G, Dasgupta I, Gao Y, Gong H. Morphological factors associated with giant vacuoles with I- pores in Schlemm's canal endothelial cells of human eyes: A serial block-face scanning electron microscopy study. Exp Eye Res 2021; 205:108488. [PMID: 33571532 DOI: 10.1016/j.exer.2021.108488] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Revised: 01/14/2021] [Accepted: 02/02/2021] [Indexed: 10/22/2022]
Abstract
Increased intraocular pressure (IOP) is the main risk factor for primary open-angle glaucoma and results from impaired drainage of aqueous humor (AH) through the trabecular outflow pathway. AH must pass the inner wall (IW) endothelium of Schlemm's canal (SC), which is a monolayer held together by tight junctions, to exit the eye. One route across the IW is through giant vacuoles (GVs) with their basal openings and intracellular pores (I-pores). AH drainage through the trabecular outflow pathway is segmental. Whether more GVs with both basal openings and I-pores are present in the active flow areas and factors that may influence formation of GVs with I-pores have not been fully elucidated due to limitations in imaging methods. In this study, we applied a relatively new technique, serial block-face scanning electron microscopy (SBF-SEM), to investigate morphological factors associated with GVs with I-pores in different flow areas. Two normal human donor eyes were perfused at 15 mmHg with fluorescent tracers to label the outflow pattern followed by perfusion-fixation. Six radial wedges of trabecular meshwork including SC (2 each from high-, low-, and non-flow areas) were imaged using SBF-SEM (total: 9802 images). Total GVs, I-pores, basal openings, and four types of GVs were identified. Percentages of GVs with I-pores and basal openings and number of I-pores/GV were determined. Overall, 14.4% (477/3302) of GVs had I-pores. Overall percentage of GVs with both I-pores and basal openings was higher in high- (15.7%), than low- (12.6%) or non-flow (7.3%) areas. Of GVs with I-pores, 83.2% had a single I-pore; 16.8% had multiple I-pores (range: 2-6). Additionally, 180 GVs (90 with I-pores and 90 without I-pores) were randomly selected, manually segmented, and three-dimensionally (3D) reconstructed to determine size, shape, and thickness of the cellular lining. Size of GVs (including median volume, surface area, and maximal cross-sectional area) with I-pores (n = 90) was significantly larger than GVs without I-pores (n = 90) using 3D-reconstructed GVs (P ≤ 0.01). Most I-pores (73.3%; 66/90) were located on or close to GV's maximal cross-sectional area with significant thinning of the cellular lining. Our results suggest that larger size and thinner cellular lining of GVs may contribute to formation of GVs with I-pores. More GVs with I-pores and basal openings were observed in high-flow areas, suggesting these GVs do provide a channel through which AH passes into SC and that increasing this type of GV may be a potential strategy to increase aqueous outflow for glaucoma treatment.
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Affiliation(s)
- David L Swain
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA; Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, MA, USA
| | - Thuy Duong Le
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA
| | - Senila Yasmin
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA
| | - Beatriz Fernandes
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA
| | - Ganimete Lamaj
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA
| | - Indira Dasgupta
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA
| | - Yanyun Gao
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA
| | - Haiyan Gong
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, USA; Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, MA, USA.
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7
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Abstract
Membrane protein pores have demonstrated applications in nanopore technology. Previous studies have mostly focused on β-barrel protein pores, whereas α-helix-based transmembrane protein pores are rarely explored in nanopore applications. Here, we developed a synthetic transmembrane peptide pore built entirely from short synthetic α-helical peptides. We examined the formation of a stable uniform ion-selective pore in single-channel electrical recordings. Furthermore, we show that cyclodextrins (CDs) block the peptide pores and determine the kinetics of CD binding and translocation. We suggest that such designed synthetic transmembrane pores will be useful for several applications in biotechnology, including stochastic sensing.
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Goodman A, Sanguinito S, Kutchko B, Natesakhawat S, Cvetic P, Allen AJ. Shale pore alteration: Potential implications for hydrocarbon extraction and CO 2 storage. Fuel (Lond) 2020; 265:10.1016/j.fuel.2019.116930. [PMID: 34131348 PMCID: PMC8201593 DOI: 10.1016/j.fuel.2019.116930] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Shale unconventional reservoirs are currently and expected to remain substantial fossil fuel resources in the future. As CO2 is being considered to enhance oil recovery and for storage purposes in unconventional reservoirs, it is unclear how the shale matrix and fractures will react with CO2 and water during these efforts. Here, we examined the Utica Shale and its reactivity with CO2 and water using scanning electron microscopy, N2 and CO2 sorption isotherms, mercury intrusion porosimetry, and X-ray scattering methods. During CO2 exposure, the presence of water can inhibit CO2 migration into the shale matrix, promote carbonate dissolution, and dramatically change the pore scale variability by opening and closing pore networks over the macro- to nano-scale range. These alterations in the shale matrix could impact flow pathways and ultimately, oil recovery factors and carbon storage potential.
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Affiliation(s)
- Angela Goodman
- A United States Department of Energy, National Energy Technology Laboratory, Pittsburgh, PA 15236, United States
| | - Sean Sanguinito
- A United States Department of Energy, National Energy Technology Laboratory, Pittsburgh, PA 15236, United States
- Leidos Research Support Team, Pittsburgh, PA 15236, United States
| | - Barbara Kutchko
- A United States Department of Energy, National Energy Technology Laboratory, Pittsburgh, PA 15236, United States
| | - Sittichai Natesakhawat
- A United States Department of Energy, National Energy Technology Laboratory, Pittsburgh, PA 15236, United States
- Department of Chemical and Petroleum Engineering, University of Pittsburgh, PA 15261, United States
| | - Patricia Cvetic
- A United States Department of Energy, National Energy Technology Laboratory, Pittsburgh, PA 15236, United States
- Leidos Research Support Team, Pittsburgh, PA 15236, United States
| | - Andrew J. Allen
- Materials Measurement Science Division, National Institute of Standards and Technology, United States Department of Commerce, Gaithersburg, MD 20899, United States
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Conde-González A, Dutta D, Wallace R, Callanan A, Bradley M. Rapid fabrication and screening of tailored functional 3D biomaterials. Mater Sci Eng C Mater Biol Appl 2019; 108:110489. [PMID: 31923957 DOI: 10.1016/j.msec.2019.110489] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 11/09/2019] [Accepted: 11/23/2019] [Indexed: 11/16/2022]
Abstract
Three dimensional synthetic polymer scaffolds have remarkable chemical and mechanical tunability in addition to biocompatibility. However, the chemical and physical space is vast in view of the number of variables that can be altered e.g. chemical composition, porosity, pore size and mechanical properties to name but a few. Here, we report the development of an array of 3D polymer scaffolds, whereby the physical and chemical properties of the polymer substrates were controlled, characterized in parallel (e.g. micro-CT scanning of 24 samples) and biological properties screened. This approach allowed the screening of 48 different polymer scaffolds constructed in situ by means of freeze-casting and photo-polymerisation with the tunable composition and 3D architecture of the polymer scaffolds facilitating the identification of optimal 3D biomaterials. As a proof of concept, the array approach was used to identify 3D polymers that were capable of supporting cell growth while controlling their behaviour. Sitting alongside classical polymer microarray technology, this novel platform reduces the gap between the identification of a biomaterial in 2D and its subsequent 3D application.
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Affiliation(s)
| | - Deepanjalee Dutta
- EaStCHEM School of Chemistry, University of Edinburgh, Edinburgh EH9 3FJ, UK
| | - Robert Wallace
- Orthopaedics and Trauma, University of Edinburgh, Edinburgh EH16 4SB, UK
| | - Anthony Callanan
- School of Engineering, Institute for Bioengineering, University of Edinburgh, Edinburgh EH9 3DW, UK
| | - Mark Bradley
- EaStCHEM School of Chemistry, University of Edinburgh, Edinburgh EH9 3FJ, UK.
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Martens BMJ, Gerrits WJJ, Bruininx EMAM, Schols HA. Amylopectin structure and crystallinity explains variation in digestion kinetics of starches across botanic sources in an in vitro pig model. J Anim Sci Biotechnol 2018; 9:91. [PMID: 30619606 PMCID: PMC6310989 DOI: 10.1186/s40104-018-0303-8] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Accepted: 10/30/2018] [Indexed: 01/10/2023] Open
Abstract
Background Starch is the main source of energy in commonly used pig diets. Besides effects related to the extent of starch digestion, also several effects related to variation in digestion rate have recently been demonstrated in non-ruminants. Different rates of starch digestion in animals and in in vitro models have been reported, depending on the botanic origin of starch. Starches from different botanic sources differ widely in structural and molecular properties. Predicting the effect of starch properties on in vitro digestion kinetics based on existing literature is hampered by incomplete characterization of the starches, or by a selective choice of starches from a limited number of botanic sources. This research aimed to analyse the relationships between starch properties and in vitro digestion kinetics of pure starches isolated from a broad range of botanic origins, which are used in non-ruminant diets or have a potential to be used in the future. Therefore we studied starch digestion kinetics of potato, pea, corn, rice, barley, and wheat starches, and analysed the granule diameter, number of pores, type and amount of crystalline structure, amylose content and amylopectin side-chain length of all starches. Results Multivariate analysis revealed strong correlations among starch properties, leading us to conclude that effects of most starch characteristics are strongly interrelated. Across all analysed botanic sources, crystalline type and amylopectin chain length showed the strongest correlation with in vitro digestion kinetics. Increased percentages of A–type crystalline structure and amylopectin side chains of DP 6–24 both increased the rate of digestion. In addition, within, but not across, (clusters of) botanic sources, a decrease in amylose content and increase in number of pores correlated positively with digestion kinetics. Conclusion The type of crystalline structure and amylopectin chain length distribution of starch correlate significantly with digestion kinetics of starches across botanic sources in an in vitro pig model. Variation in digestion kinetics across botanic sources is not additively explained by other starch properties measured, but appears to be confined within botanical sources. Electronic supplementary material The online version of this article (10.1186/s40104-018-0303-8) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Bianca M J Martens
- 1Laboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands.,2Animal Nutrition Group, Wageningen University and Research, De Elst 1, 6708 WD Wageningen, The Netherlands.,Royal Agrifirm Group, Agrifirm North West Europe, Landgoedlaan 20, 7325 AW Apeldoorn, The Netherlands
| | - Walter J J Gerrits
- 2Animal Nutrition Group, Wageningen University and Research, De Elst 1, 6708 WD Wageningen, The Netherlands
| | - Erik M A M Bruininx
- 2Animal Nutrition Group, Wageningen University and Research, De Elst 1, 6708 WD Wageningen, The Netherlands.,Royal Agrifirm Group, Agrifirm North West Europe, Landgoedlaan 20, 7325 AW Apeldoorn, The Netherlands
| | - Henk A Schols
- 1Laboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands
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11
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Ashoor M, Khorshidi A, Sarkhosh L. Estimation of microvascular capillary physical parameters using MRI assuming a pseudo liquid drop as model of fluid exchange on the cellular level. Rep Pract Oncol Radiother 2019; 24:3-11. [PMID: 30337842 DOI: 10.1016/j.rpor.2018.09.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Revised: 04/30/2018] [Accepted: 09/06/2018] [Indexed: 11/20/2022] Open
Abstract
Aim One of the most important microvasculatures' geometrical variables is number of pores per capillary length that can be evaluated using MRI. The transportation of blood from inner to outer parts of the capillary is studied by the pores and the relationship among capillary wall thickness, size and the number of pores is examined. Background Characterization of capillary space may obtain much valuable information on the performance of tissues as well as the angiogenesis. Methods To estimate the number of pores, a new pseudo-liquid drop model along with appropriate quantitative physiological purposes has been investigated toward indicating a package of data on the capillary space. This model has utilized the MRI perfusion, diffusion and relaxivity parameters such as cerebral blood volume (CBV), apparent diffusion coefficient (ADC), ΔR 2 and Δ R 2 * values. To verify the model, a special protocol was designed and tested on various regions of eight male Wistar rats. Results The maximum number of pores per capillary length in the various conditions such as recovery, core, normal-recovery, and normal-core were found to be 183 ± 146, 176 ± 160, 275 ± 166, and 283 ± 143, respectively. This ratio in the normal regions was more than that of the damaged ones. The number of pores increased with increasing mean radius of the capillary and decreasing the thickness of the wall in the capillary space. Conclusion Determination of the number of capillary pore may most likely help to evaluate angiogenesis in the tissues and treatment planning of abnormal ones.
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Key Words
- 2DFT, two-dimensional Fourier transform
- ADC, apparent diffusion coefficient
- CBF, cerebral blood flow
- CBV, cerebral blood volume
- DWI, diffusion weighted imaging
- Diameter
- Diffusion MRI
- FLASH, fast low angle shot
- FOV, field of view
- MCA, middle cerebral artery
- MTT, mean transit time
- Microvasculature
- PWI, perfusion weighted imaging
- Pores
- Pseudo-liquid drop model
- RF, radio frequency
- ROI, region of interest
- TCL, total capillary length
- VSI, vessel size index
- Wistar rats
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12
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Renkawitz J, Reversat A, Leithner A, Merrin J, Sixt M. Micro-engineered "pillar forests" to study cell migration in complex but controlled 3D environments. Methods Cell Biol 2018; 147:79-91. [PMID: 30165964 DOI: 10.1016/bs.mcb.2018.07.004] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Cells migrating in multicellular organisms steadily traverse complex three-dimensional (3D) environments. To decipher the underlying cell biology, current experimental setups either use simplified 2D, tissue-mimetic 3D (e.g., collagen matrices) or in vivo environments. While only in vivo experiments are truly physiological, they do not allow for precise manipulation of environmental parameters. 2D in vitro experiments do allow mechanical and chemical manipulations, but increasing evidence demonstrates substantial differences of migratory mechanisms in 2D and 3D. Here, we describe simple, robust, and versatile "pillar forests" to investigate cell migration in complex but fully controllable 3D environments. Pillar forests are polydimethylsiloxane-based setups, in which two closely adjacent surfaces are interconnected by arrays of micrometer-sized pillars. Changing the pillar shape, size, height and the inter-pillar distance precisely manipulates microenvironmental parameters (e.g., pore sizes, micro-geometry, micro-topology), while being easily combined with chemotactic cues, surface coatings, diverse cell types and advanced imaging techniques. Thus, pillar forests combine the advantages of 2D cell migration assays with the precise definition of 3D environmental parameters.
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Affiliation(s)
- Jörg Renkawitz
- Institute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria
| | - Anne Reversat
- Institute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria
| | - Alex Leithner
- Institute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria
| | - Jack Merrin
- Institute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria
| | - Michael Sixt
- Institute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria.
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Abstract
The state-of-the art in the design and the manufacture methods of the different electromagnetic shielding materials has been reviewed. This topic has become a mainstream field of research because of the electromagnetic pollution generated by telecommunication technology development. The review is centred in absorbent materials and shows a general overview of how the absorption properties of such composites can be tailored through changes in geometry, composition, morphology, and the filler particles content. Although different types of materials are explained, the text is mainly focused on carbon materials such as graphene and carbon nanotubes. In this way, the importance of the dispersion of the conductive fillers in different polymer matrices is discussed. In addition, an extensive study on new complex architectures such as foam-based materials is presented. Finally, the combination of carbon fillers with other constituents such as metallic nanoparticles is mentioned. In all these studies, the efficiency of the composites as absorbent or reflective of electromagnetic radiation is discussed.
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Affiliation(s)
- Marta González
- Departmento de Ciencia e Ingeniería de Materiales e Ingeniería Química (IAAB), Universidad Carlos III de Madrid, Avda. de la Universidad, 30, 28911) Leganés, Madrid, Spain
| | - Javier Pozuelo
- Departmento de Ciencia e Ingeniería de Materiales e Ingeniería Química (IAAB), Universidad Carlos III de Madrid, Avda. de la Universidad, 30, 28911) Leganés, Madrid, Spain
| | - Juan Baselga
- Departmento de Ciencia e Ingeniería de Materiales e Ingeniería Química (IAAB), Universidad Carlos III de Madrid, Avda. de la Universidad, 30, 28911) Leganés, Madrid, Spain
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Han SE, Go JY, Choi DS, Seo GH, Lim SY. Experience with specially designed pored polyacetal mold dressing method used in McIndoe-style vaginoplasty. J Pediatr Urol 2017; 13:621.e1-621.e6. [PMID: 28711548 DOI: 10.1016/j.jpurol.2017.05.014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/13/2016] [Accepted: 05/08/2017] [Indexed: 10/19/2022]
Abstract
INTRODUCTION Appropriate postoperative care and prolonged use of the mold are prerequisites for achieving successful results in McIndoe-style vaginoplasty. OBJECTIVE We introduce a specially designed pored polyacetal mold to maintain the reconstructed vagina, with favorable long-term results allowing drainage of the serous and bloody discharge without removal of the mold, and reduction of infection rate and the chance of skin graft shearing in McIndoe vaginoplasty. METHODS We retrospectively reviewed data of 10 consecutive patients with Mayer-Rokitansky-Kuster-Hauser syndrome who underwent McIndoe vaginoplasty between March 2010 and January 2014. We used a specially designed pored polyacetal mold (Figure) in all reconstructed vaginal wounds. The anatomical surgical success was evaluated by physical examination and functional success, which was defined as satisfaction with sex evaluated by patient self-assessed questionnaire. RESULTS The follow-up period ranged from 1 to 3.5 years. The postoperative mean vaginal length was 9.5 cm in nine patients who used the mold regularly. In all cases in which a pored polyacetal mold was used, skin engraftment was successfully maintained without partial skin graft loss or infection. The subjective patient self-assessed satisfaction evaluation reported a high satisfaction rate. DISCUSSION The multi-holed polyacetal vaginal mold was designed to perform vaginal irrigation without removal of the mold, allowing drainage of the serous and bloody discharge. This makes it possible to reduce infection rate and maintain successful skin engraftment by reducing the chance of skin graft shearing. The characteristics of polyacetal make it useful as a vaginal mold material as it is lightweight to use, easy to manufacture in accordance with the dimensions of the neovaginal space, and cost-effective. Although a constant follow-up evaluation is required, the pored polyacetal mold is an attractive vaginal mold dressing material to maximize the initial graft uptake, and it can be individually tailored in patients undergoing McIndoe-style vaginoplasty. CONCLUSIONS The specially designed vaginal mold made up of pored polyacetal is a proper vaginal mold, which could maximize the initial graft uptake, decrease the risk of wound infection, and, therefore, decrease contracture of the neovagina in patients undergoing McIndoe vaginoplasty.
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Affiliation(s)
- So-Eun Han
- Department of Plastic and Reconstructive Surgery, Ilsan Paik Hospital, Inje University, Goyang, Republic of Korea
| | - Ju Young Go
- Department of Plastic Surgery, Samsung Medical Center, Sungkyunkwan University, School of Medicine, Seoul, Republic of Korea
| | - Doo Seok Choi
- Department of Obstetrics and Gynecology, Samsung Medical Center, Sungkyunkwan University, School of Medicine, Seoul, Republic of Korea
| | - Gi Hong Seo
- Department of Biomedical Engineering, Samsung Medical Center, Sungkyunkwan University, School of Medicine, Seoul, Republic of Korea
| | - So Young Lim
- Department of Plastic Surgery, Samsung Medical Center, Sungkyunkwan University, School of Medicine, Seoul, Republic of Korea.
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15
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Brough D, Pelegrin P, Nickel W. An emerging case for membrane pore formation as a common mechanism for the unconventional secretion of FGF2 and IL-1β. J Cell Sci 2017; 130:3197-3202. [PMID: 28871048 DOI: 10.1242/jcs.204206] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2017] [Accepted: 07/20/2017] [Indexed: 12/12/2022] Open
Abstract
Extracellular proteins with important signalling roles in processes, such as inflammation and angiogenesis, are known to employ unconventional routes of protein secretion. Although mechanisms of unconventional protein secretion are beginning to emerge, the precise molecular details have remained elusive for the majority of cargo proteins secreted by unconventional means. Recent findings suggest that for two examples of unconventionally secreted proteins, interleukin 1β (IL-1β) and fibroblast growth factor 2 (FGF2), the common molecular principle of pore formation may be shared. Under specific experimental conditions, secretion of IL-1β and FGF2 is triggered by phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2]-dependent formation of pores across the plasma membrane. However, the underlying mechanisms are different, with FGF2 known to directly interact with PI(4,5)P2, whereas in the case of IL-1β secretion, it is proposed that the N-terminal fragment of gasdermin D interacts with PI(4,5)P2 to form the pore. Thus, although implemented in different ways, these findings suggest that pore formation may be shared by the unconventional secretion mechanisms for FGF2 and IL-1β in at least some cases. In this Opinion article, we discuss the unconventional mechanisms of FGF2 and IL-1β release with a particular emphasis on recent discoveries suggesting the importance of pore formation on the plasma membrane.
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Affiliation(s)
- David Brough
- Division of Neuroscience and Experimental Psychology, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, University of Manchester, Manchester, M13 9PT, UK
| | - Pablo Pelegrin
- Grupo de Inflamación Molecular, Hospital Clínico Universitario Virgen de la Arrixaca, Instituto Murciano de Investigación Biosanitaria-Arrixaca (IMIB-Arrixaca), 30120 Murcia, Spain
| | - Walter Nickel
- Heidelberg University Biochemistry Center, Im Neuenheimer Feld 328, 69120 Heidelberg, Germany
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16
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Ranathunge K, Schreiber L, Bi YM, Rothstein SJ. Ammonium-induced architectural and anatomical changes with altered suberin and lignin levels significantly change water and solute permeabilities of rice (Oryza sativa L.) roots. Planta 2016; 243:231-49. [PMID: 26384983 DOI: 10.1007/s00425-015-2406-1] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2015] [Accepted: 09/07/2015] [Indexed: 05/23/2023]
Abstract
Non-optimal ammonium levels significantly alter root architecture, anatomy and root permeabilities for water and nutrient ions. Higher ammonium levels induced strong apoplastic barriers whereas it was opposite for lower levels. Application of nitrogen fertilizer increases crop productivity. However, non-optimal applications can have negative effects on plant growth and development. In this study, we investigated how different levels of ammonium (NH4 (+)) [low (30 or 100 μM) or optimum (300 μM) or high (1000 or 3000 μM)] affect physio-chemical properties of 1-month-old, hydroponically grown rice roots. Different NH4 (+) treatments markedly altered the root architecture and anatomy. Plants grown in low NH4 (+) had the longest roots with a weak deposition of suberised and lignified apoplastic barriers, and it was opposite for plants grown in high NH4 (+). The relative expression levels of selected suberin and lignin biosynthesis candidate genes, determined using qRT-PCR, were lowest in the roots from low NH4 (+), whereas, they were highest for those grown in high NH4 (+). This was reflected by the suberin and lignin contents, and was significantly lower in roots from low NH4 (+) resulting in greater hydraulic conductivity (Lp r) and solute permeability (P sr) than roots from optimum NH4 (+). In contrast, roots grown at high NH4 (+) had markedly greater suberin and lignin contents, which were reflected by strong barriers. These barriers significantly decreased the P sr of roots but failed to reduce the Lp r below those of roots grown in optimum NH4 (+), which can be explained in terms of the physical properties of the molecules used and the size of pores in the apoplast. It is concluded that, in rice, non-optimal NH4 (+) levels differentially affected root properties including Lp r and P sr to successfully adapt to the changing root environment.
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Affiliation(s)
- Kosala Ranathunge
- Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, N1G 2W1, Canada.
| | - Lukas Schreiber
- Department of Ecophysiology, Institute of Cellular and Molecular Botany, University of Bonn, Kirschallee 1, 53115, Bonn, Germany
| | - Yong-Mei Bi
- Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, N1G 2W1, Canada
| | - Steven J Rothstein
- Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, N1G 2W1, Canada
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17
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Choi WY, Kim HE, Moon YW, Shin KH, Koh YH. Production of porous Calcium Phosphate (CaP) ceramics with aligned pores using ceramic/camphene-based co-extrusion. Biomater Res 2015; 19:16. [PMID: 26331085 PMCID: PMC4552288 DOI: 10.1186/s40824-015-0037-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2014] [Accepted: 06/09/2015] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Calcium phosphate (CaP) ceramics are one of the most valuable biomaterials for uses as the bone scaffold owing to their outstanding biocompatability, bioactivity, and biodegradation nature. In particular, these materials with an open porous structure can stimulate bone ingrowth into their 3-dimensionally interconnected pores. However, the creation of pores in bulk materials would inevitably cause a severe reduction in mechanical properties. Thus, it is a challenge to explore new ways of improving the mechanical properties of porous CaP scaffolds without scarifying their high porosity. RESULTS Porous CaP ceramic scaffolds with aligned pores were successfully produced using ceramic/camphene-based co-extrusion. This aligned porous structure allowed for the achievement of high compressive strength when tested parallel to the direction of aligned pores. In addition, the overall porosity and mechanical properties of the aligned porous CaP ceramic scaffolds could be tailored simply by adjusting the initial CaP content in the CaP/camphene slurry. The porous CaP scaffolds showed excellent in vitro biocompatibility, suggesting their potential as the bone scaffold. CONCLUSIONS Aligned porous CaP ceramic scaffolds with considerably enhanced mechanical properties and tailorable porosity would find very useful applications as the bone scaffold.
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Affiliation(s)
- Won-Young Choi
- />Department of Materials Science and Engineering, Seoul National University, Seoul, 151-742 Korea
| | - Hyoun-Ee Kim
- />Department of Materials Science and Engineering, Seoul National University, Seoul, 151-742 Korea
| | - Young-Wook Moon
- />School of Biomedical Engineering, Korea University, Seoul, 136-703 Korea
| | - Kwan-Ha Shin
- />School of Biomedical Engineering, Korea University, Seoul, 136-703 Korea
| | - Young-Hag Koh
- />School of Biomedical Engineering, Korea University, Seoul, 136-703 Korea
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18
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Lee SY, Bang S, Kim S, Jo SY, Kim BC, Hwang Y, Noh I. Synthesis and in vitro characterizations of porous carboxymethyl cellulose-poly(ethylene oxide) hydrogel film. Biomater Res 2015; 19:12. [PMID: 26331082 PMCID: PMC4552372 DOI: 10.1186/s40824-015-0033-3] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Accepted: 04/03/2015] [Indexed: 12/04/2022] Open
Abstract
BACKGROUND Cellulose and its derivatives such as carboxymethyl cellulose (CMC) have been employed as a biomaterial for their diverse applications such as tissue engineering, drug delivery and other medical materials. Porosity of the scaffolds has advantages in their applications to tissue engineering such as more cell adhesion and migration leading to better tissue regeneration. After synthesis of CMC-poly(ethylene oxide) (PEO) hydrogel by mixing the solutions of both CMC-acrylate and PEO-hexa-thiols, fabrication and evaluation of a CMC-PEO gel and its film in porous form have been made for its possible applications to tissue regeneration. Physicochemical and biological properties of both CMC-PEO hydrogel and porous films have been evaluated by using physicochemical assays by SEM, FTIR and swelling behaviors as well as in vitro assays of MTT, Neutral red, BrdU, gel covering and tissue ingrowth into the pores of the CMC-PEO gel films. Degradation of CMC-PEO hydrogel was also evaluated by treating with esterase over time. RESULTS Chemical grafting of acrylate to CMC was verified by analyses of both FTIR and NMR. CMC-PEO hydrogel was obtained by mixing two precursor polymer solutions of CMC-acrylate and PEO-hexa-thiols and by transforming into a porous CMC-PEO gel film by gas forming of ammonium bicarbonate particles. The fabricated hydrogel has swollen in buffer to more than 6 times and degraded by esterase. The results of in vitro assays of live and dead, MTT, BrdU, Neutral red and gel covering on the cells showed excellent cell compatibility of CMC-PEO hydrogel and porous gel films. Furthermore the porous films showed excellent in vitro adhesion and migration of cells into their pore channels as observed by H&E and MT stains. CONCLUSIONS Both CMC-PEO hydrogel and porous gel films showed excellent biocompatibility and were expected to be a good candidate scaffold for tissue engineering.
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Affiliation(s)
- Su Yeon Lee
- />Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
| | - Sumi Bang
- />Convergence Institute of Biomedical Engineering and Biomaterials, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
| | - Sumi Kim
- />Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
| | - Seong Yeon Jo
- />Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
| | - Bum-Chul Kim
- />Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
| | - Yunjae Hwang
- />Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
| | - Insup Noh
- />Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
- />Convergence Institute of Biomedical Engineering and Biomaterials, Seoul National University of Science and Technology, 232 Gongneung-ro, Nowon-gu, Seoul, 139-743 Republic of South Korea
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Das O, Sarmah AK. The love-hate relationship of pyrolysis biochar and water: a perspective. Sci Total Environ 2015; 512-513:682-685. [PMID: 25633868 DOI: 10.1016/j.scitotenv.2015.01.061] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Revised: 01/05/2015] [Accepted: 01/20/2015] [Indexed: 06/04/2023]
Abstract
Biochar is being considered for environmental sustainability by the scientific community and as a result is extensively investigated for various applications in agriculture, remediation and construction. Hence, a sound knowledge of biochar's physical and chemical properties is critical. However, the dynamics of biochar-water interaction remain ambiguous. We hypothesize that the hydrophobicity of a biochar made at low pyrolysis temperature is not permanent under water-rich conditions. Our results suggest that the aliphatic functional groups responsible for biochar's hydrophobicity are displaced when subjected to water which eventually increases the affinity of the biochar towards water. We envisage that commentary would stimulate researchers to investigate the biochar-water interaction in a new light and eventually help design a biochar which would be apt for their intended end use.
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Affiliation(s)
- Oisik Das
- Department of Civil and Environmental Engineering, The University of Auckland, Auckland 1142, New Zealand
| | - Ajit K Sarmah
- Department of Civil and Environmental Engineering, The University of Auckland, Auckland 1142, New Zealand.
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20
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Braakman ST, Read AT, Chan DWH, Ethier CR, Overby DR. Colocalization of outflow segmentation and pores along the inner wall of Schlemm's canal. Exp Eye Res 2015; 130:87-96. [PMID: 25450060 PMCID: PMC4305530 DOI: 10.1016/j.exer.2014.11.008] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2014] [Accepted: 11/12/2014] [Indexed: 11/30/2022]
Abstract
All aqueous humor draining through the conventional outflow pathway must cross the endothelium of Schlemm's canal (SC), likely by passing through micron-sized transendothelial pores. SC pores are non-uniformly distributed along the inner wall endothelium, but it is unclear how the distribution of pores relates to the non-uniform or segmental distribution of aqueous humor outflow through the trabecular meshwork. It is hypothesized that regions in the juxtacanalicular tissue (JCT) with higher local outflow should coincide with regions of greater inner wall pore density compared to JCT regions with lower outflow. Three pairs of non-glaucomatous human donor eyes were perfused at 8 mmHg with fluorescent tracer nanospheres to decorate local patterns of outflow segmentation through the JCT. The inner wall was stained for CD31 and/or vimentin and imaged en face using confocal and scanning electron microscopy (SEM). Confocal and SEM images were spatially registered to examine the spatial relationship between inner wall pore density and tracer intensity in the underlying JCT. For each eye, tracer intensity, pore density (n) and pore diameter (D) (for both transcellular "I" and paracellular "B" pores) were measured in 4-7 regions of interest (ROIs; 50 × 150 μm each). Analysis of covariance was used to examine the relationship between tracer intensity and pore density, as well as the relationship between tracer intensity and three pore metrics (nD, nD(2) and nD(3)) that represent the local hydraulic conductivity of the outflow pathway as predicted by various hydrodynamic models. Tracer intensity in the JCT correlated positively with local pore density when considering total pores (p = 0.044) and paracellular B pores on their own (p = 0.016), but not transcellular I-pores on their own (p = 0.54). Local hydraulic conductivity as predicted by the three hydrodynamic models all showed a significant positive correlation with tracer intensity when considering total pores and B-pores (p < 0.0015 and p < 10(-4)) but not I-pores (p > 0.38). These data suggest that aqueous humor passes through micron-sized pores in the inner wall endothelium of SC. Paracellular B-pores appear to have a dominant contribution towards transendothelial filtration across the inner wall relative to transcellular I-pores. Impaired pore formation, as previously described in glaucomatous SC cells, may thereby contribute to greater outflow heterogeneity, outflow obstruction, and IOP elevation in glaucoma.
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Affiliation(s)
- Sietse T Braakman
- Department of Bioengineering, Imperial College London, London, United Kingdom
| | - A Thomas Read
- Department of Ophthalmology and Vision Sciences, University of Toronto, Canada
| | - Darren W-H Chan
- Department of Ophthalmology and Vision Sciences, University of Toronto, Canada
| | - C Ross Ethier
- Department of Bioengineering, Imperial College London, London, United Kingdom; Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, USA
| | - Darryl R Overby
- Department of Bioengineering, Imperial College London, London, United Kingdom.
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Winterhalter M. Lipid membranes in external electric fields: kinetics of large pore formation causing rupture. Adv Colloid Interface Sci 2014; 208:121-8. [PMID: 24485595 DOI: 10.1016/j.cis.2014.01.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2013] [Revised: 01/06/2014] [Accepted: 01/10/2014] [Indexed: 10/25/2022]
Abstract
About 40 years ago, Helfrich introduced an elastic model to explain shapes and shape transitions of cells (Z Naturforsch C, 1973; 28:693). This seminal article stimulated numerous theoretical as well as experimental investigations and created new research fields. In particular, the predictive power of his approach was demonstrated in a large variety of lipid model system. Here in this review, we focus on the development with respect to planar lipid membranes in external electric fields. Stimulated by the early work of Helfrich on electric field forces acting on liposomes, we extended his early approach to understand the kinetics of lipid membrane rupture. First, we revisit the main forces determining the kinetics of membrane rupture followed by an overview on various experiments. Knowledge on the kinetics of defect formation may help to design stable membranes or serve for novel mechanism for controlled release.
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Morrill GA, Kostellow AB, Gupta RK. A computational analysis of non-genomic plasma membrane progestin binding proteins: signaling through ion channel-linked cell surface receptors. Steroids 2013; 78:1233-44. [PMID: 24012561 DOI: 10.1016/j.steroids.2013.08.006] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/12/2013] [Revised: 08/13/2013] [Accepted: 08/20/2013] [Indexed: 12/18/2022]
Abstract
A number of plasma membrane progestin receptors linked to non-genomic events have been identified. These include: (1) α1-subunit of the Na(+)/K(+)-ATPase (ATP1A1), (2) progestin binding PAQR proteins, (3) membrane progestin receptor alpha (mPRα), (4) progesterone receptor MAPR proteins and (5) the association of nuclear receptor (PRB) with the plasma membrane. This study compares: the pore-lining regions (ion channels), transmembrane (TM) helices, caveolin binding (CB) motifs and leucine-rich repeats (LRRs) of putative progesterone receptors. ATP1A1 contains 10 TM helices (TM-2, 4, 5, 6 and 8 are pores) and 4 CB motifs; whereas PAQR5, PAQR6, PAQR7, PAQRB8 and fish mPRα each contain 8 TM helices (TM-3 is a pore) and 2-4 CB motifs. MAPR proteins contain a single TM helix but lack pore-lining regions and CB motifs. PRB contains one or more TM helices in the steroid binding region, one of which is a pore. ATP1A1, PAQR5/7/8, mPRα, and MAPR-1 contain highly conserved leucine-rich repeats (LRR, common to plant membrane proteins) that are ligand binding sites for ouabain-like steroids associated with LRR kinases. LRR domains are within or overlap TM helices predicted to be ion channels (pore-lining regions), with the variable LRR sequence either at the C-terminus (PAQR and MAPR-1) or within an external loop (ATP1A1). Since ouabain-like steroids are produced by animal cells, our findings suggest that ATP1A1, PAQR5/7/8 and mPRα represent ion channel-linked receptors that respond physiologically to ouabain-like steroids (not progestin) similar to those known to regulate developmental and defense-related processes in plants.
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Affiliation(s)
- Gene A Morrill
- Department of Physiology & Biophysics, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA.
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