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Hul LM, Ibelli AMG, Peixoto JDO, Souza MR, Savoldi IR, Marcelino DEP, Tremea M, Ledur MC. Reference genes for proximal femoral epiphysiolysis expression studies in broilers cartilage. PLoS One 2020; 15:e0238189. [PMID: 32841273 PMCID: PMC7447007 DOI: 10.1371/journal.pone.0238189] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Accepted: 08/11/2020] [Indexed: 12/18/2022] Open
Abstract
The use of reference genes is required for relative quantification in gene expression analysis and the stability of these genes can be variable depending on the experimental design. Therefore, it is indispensable to test the reliability of endogenous genes previously to their use. This study evaluated nine candidate reference genes to select the most stable genes to be used as reference in gene expression studies with the femoral cartilage of normal and epiphysiolysis-affected broilers. The femur articular cartilage of 29 male broilers with 35 days of age was collected, frozen and further submitted to RNA extraction and quantitative PCR (qPCR) analysis. The candidate reference genes evaluated were GAPDH, HMBS, HPRT1, MRPS27, MRPS30, RPL30, RPL4, RPL5, and RPLP1. For the gene stability evaluation, three software were used: GeNorm, BestKeeper and NormFinder, and a global ranking was generated using the function RankAggreg. In this study, the RPLP1 and RPL5 were the most reliable endogenous genes being recommended for expression studies with femur cartilage in broilers with epiphysiolysis and possible other femur anomalies.
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Affiliation(s)
- Ludmila Mudri Hul
- Programa de Pós-Graduação em Ciências Veterinárias, Universidade Estadual do Centro-Oeste, Guarapuava, Paraná, Brazil
| | - Adriana Mércia Guaratini Ibelli
- Programa de Pós-Graduação em Ciências Veterinárias, Universidade Estadual do Centro-Oeste, Guarapuava, Paraná, Brazil
- Embrapa Suínos e Aves, Concórdia, Santa Catarina, Brazil
| | - Jane de Oliveira Peixoto
- Programa de Pós-Graduação em Ciências Veterinárias, Universidade Estadual do Centro-Oeste, Guarapuava, Paraná, Brazil
- Embrapa Suínos e Aves, Concórdia, Santa Catarina, Brazil
| | - Mayla Regina Souza
- Programa de Pós-Graduação em Zootecnia, UDESC-Oeste, Chapecó, Santa Catarina, Brazil
| | - Igor Ricardo Savoldi
- Programa de Pós-Graduação em Zootecnia, UDESC-Oeste, Chapecó, Santa Catarina, Brazil
| | | | - Mateus Tremea
- Universidade Federal de Santa Maria, campus Palmeira das Missões, Rio Grande do Sul, Brazil
| | - Mônica Corrêa Ledur
- Embrapa Suínos e Aves, Concórdia, Santa Catarina, Brazil
- Programa de Pós-Graduação em Zootecnia, UDESC-Oeste, Chapecó, Santa Catarina, Brazil
- * E-mail:
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de Oliveira Peixoto J, Savoldi IR, Ibelli AMG, Cantão ME, Jaenisch FRF, Giachetto PF, Settles ML, Zanella R, Marchesi JAP, Pandolfi JR, Coutinho LL, Ledur MC. Proximal femoral head transcriptome reveals novel candidate genes related to epiphysiolysis in broiler chickens. BMC Genomics 2019; 20:1031. [PMID: 31888477 PMCID: PMC6937697 DOI: 10.1186/s12864-019-6411-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2018] [Accepted: 12/18/2019] [Indexed: 12/19/2022] Open
Abstract
BACKGROUND The proximal femoral head separation (FHS) or epiphysiolysis is a prevalent disorder affecting the chicken femur epiphysis, being considered a risk factor to infection which can cause bacterial chondronecrosis with osteomyelitis in broilers. To identify the genetic mechanisms involved in epiphysiolysis, differentially expressed (DE) genes in the femur of normal and FHS-affected broilers were identified using RNA-Seq technology. Femoral growth plate (GP) samples from 35-day-old commercial male broilers were collected from 4 healthy and 4 FHS-affected broilers. Sequencing was performed using an Illumina paired-end protocol. Differentially expressed genes were obtained using the edgeR package based on the False Discovery Rate (FDR < 0.05). RESULTS Approximately 16 million reads/sample were generated with 2 × 100 bp paired-end reads. After data quality control, approximately 12 million reads/sample were mapped to the reference chicken genome (Galgal5). A total of 12,645 genes were expressed in the femur GP. Out of those, 314 were DE between groups, being 154 upregulated and 160 downregulated in FHS-affected broilers. In the functional analyses, several biological processes (BP) were overrepresented. Among them, those related to cell adhesion, extracellular matrix (ECM), bone development, blood circulation and lipid metabolism, which are more related to chicken growth, are possibly involved with the onset of FHS. On the other hand, BP associated to apoptosis or cell death and immune response, which were also found in our study, could be related to the consequence of the FHS. CONCLUSIONS Genes with potential role in the epiphysiolysis were identified through the femur head transcriptome analysis, providing a better understanding of the mechanisms that regulate bone development in fast-growing chickens. In this study, we highlighted the importance of cell adhesion and extracellular matrix related genes in triggering FHS. Furthermore, we have shown new insights on the involvement of lipidemia and immune response/inflammation with FHS in broilers. Understanding the changes in the GP transcriptome might support breeding strategies to address poultry robustness and to obtain more resilient broilers.
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Affiliation(s)
- Jane de Oliveira Peixoto
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
- Programa de Pós-Graduação em Ciências Veterinárias, Universidade Estadual do Centro-Oeste, Guarapuava, Paraná, Brazil
| | - Igor Ricardo Savoldi
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
- Universidade do Contestado, Concórdia, Santa Catarina Brazil
- Programa de Pós-Graduação em Zootecnia, UDESC-Oeste, Chapecó, SC Brazil
| | - Adriana Mércia Guaratini Ibelli
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
- Programa de Pós-Graduação em Ciências Veterinárias, Universidade Estadual do Centro-Oeste, Guarapuava, Paraná, Brazil
- Universidade do Contestado, Concórdia, Santa Catarina Brazil
| | - Maurício Egídio Cantão
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
| | - Fátima Regina Ferreira Jaenisch
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
| | | | | | - Ricardo Zanella
- Universidade de Passo Fundo, Passo Fundo, RS Brazil
- Programa de Mestrado em BioExperimentação, UPF, Passo Fundo, RS Brazil
| | - Jorge Augusto Petroli Marchesi
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
- Department of Genetics, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, SP Brazil
| | - José Rodrigo Pandolfi
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
| | | | - Mônica Corrêa Ledur
- Embrapa Suínos e Aves, Rodovia BR-153, Km 110, Distrito de Tamanduá, Caixa Postal: 321, Concórdia, Santa Catarina 89715-899 Brazil
- Programa de Pós-Graduação em Zootecnia, UDESC-Oeste, Chapecó, SC Brazil
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Abstract
Feline physeal dysplasia typically presents as unilateral or bilateral, atraumatic, slipped capital femoral epiphysis. The femoral physeal lesion consists of retention of a cartilaginous physis beyond the expected age of closure, with disorganization of the chondrocytes and subsequent slippage. in this article, we describe two cats with feline physeal dysplasia and slipped capital femoral epiphysis that died of unrelated causes (cardiomyopathy and lymphosarcoma). At necropsy, additional sites were found to have retained physes with similar abnormal arrangement of chondrocytes. This confirms that physeal dysplasia in cats is a widespread multicentric disorder of chondrocytes that precedes the development of slipped capital femoral epiphysis.
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Affiliation(s)
- A L Newton
- University of Tennessee College of Veterinary Medicine, Department of Pathobiology, 2407 River Drive, Knoxville, TN 37996-4542, USA
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Maarschalkerweerd RJ, van Zuilen CD, van Klaveren NJ. [Epiphysiolysis in the cat, a fracture?]. Tijdschr Diergeneeskd 2009; 134:850-852. [PMID: 19891328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Affiliation(s)
- R J Maarschalkerweerd
- Diergeneeskundig Orthopedisch Centrum Amsterdam, Rietwijkerstraat 27, 1059 vv, Amsterdam.
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Abstract
In a retrospective review of 43 femoral fractures, three dogs had separation of the femoral capital epiphysis from the metaphysis in the absence of trauma. Two of these dogs also had evidence of pathology in the contralateral femoral neck including, in one dog, displacement of the capital epiphysis in relation to the metaphysis without actual separation. The case histories, radiographic features and histopathological findings of these cases were reviewed and compared with previous cases of slipped capital femoral epiphysis (SCFE) reported in dogs and also with SCFE in children. Pre-slip, acute, chronic and acute-on-chronic slips were Identified. Based on the cases reviewed, the authors advise internal fixation of stable slipped epiphyses in dogs. This may also be appropriate for unstable separations, although resorption of the femoral neck may preclude stable fixation and necessitate femoral head and neck excision.
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Affiliation(s)
- A P Moores
- Department of Veterinary Clinical Sciences, The Royal Veterinary College, Hawkshead Lane, North Mymms, Hatfield, Hertfordshire
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Burke J. Physeal dysplasia with slipped capital femoral epiphysis in a cat. Can Vet J 2003; 44:238-9. [PMID: 12677696 PMCID: PMC340087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 03/01/2023]
Abstract
A 14-month-old, intact male cat presented with acute onset, severe right hind limb lameness. Pelvic radiographs, excision of the femoral head, and histopathologic examination resulted in a diagnosis of physeal dysplasia with slipped capital femoral epiphysis. The cat rapidly regained use of the affected limb.
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Affiliation(s)
- Julie Burke
- Ontario Veterinary College, University of Guelph, Guelph, Ontario N1G 2W1
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Abstract
Separation of the femoral capital epiphysis is associated with severe trauma in most species. This report describes 13 cats with slipped capital femoral epiphysis characterized by a distinctive lesion in the physeal cartilage. The lesion consists of irregular clusters of chondrocytes separated by abundant matrix on both the epiphyseal and metaphyseal side of the cleavage site. The affected population in this study is 85% male, 90% overweight, 23% Siamese, and 4.5-24 months old. The histopathology and demographics are similar to slipped capital femoral epiphysis in humans, which most often affects overweight adolescent boys.
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Affiliation(s)
- L E Craig
- University of Pennsylvania School of Veterinary Medicine, Laboratory of Pathology and Toxicology, Philadelphia 19104-6051, USA.
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Steger H, Rytz U, Schawalder P. [Bilateral idiopathic femur head epiphyseolysis ("slipped epiphysis") in cats: literature review and case description]. SCHWEIZ ARCH TIERH 1999; 141:47-52. [PMID: 10028226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
Abstract
One case of a bilateral idiopathic slipped capital femoral epiphysis--"slipped epiphysis"--in a cat is described. The similarities and the differences between the cases in human and small animal medicine concerning the incidence, the hypotheses of the pathogenesis and the treatment options are discussed.
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Affiliation(s)
- H Steger
- Abteilung für Chirurgie und Orthopädie, Klinik für kleine Haustiere, Universität Bern
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Dupuis J, Breton L, Drolet R. Bilateral epiphysiolysis of the femoral heads in two dogs. J Am Vet Med Assoc 1997; 210:1162-5. [PMID: 9108923] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Two Shetland Sheepdogs that did not have a history of trauma were referred because of a gradual onset of lameness in the hind limbs. Bilateral slipped capital femoral epiphysis was diagnosed. Separation of the proximal femoral epiphysis that is not associated with trauma is recognized as a distinct clinical syndrome in adolescent human beings and swine, causing a condition called epiphysiolysis. The precise cause of this type of injury is unknown. Histologic lesions observed in the growth plates could have been the result of an abnormally high mechanical load imposed by obesity. It is not known whether cartilaginous lesions observed in the physis of 1 dog represented a preexisting cartilaginous defect (dyschondroplasia) or a late stage of repair after separation of the capital femoral epiphysis.
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Affiliation(s)
- J Dupuis
- Department of Clinical Sciences, Facultè de Medecine Vètèrinaire, Universite de Montrèal, St. Hyacinthe, PQ, Canada
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Belkoff SM, Millis DL, Probst CW. Biomechanical comparison of 1-screw and 2-divergent pin internal fixations for treatment of slipped capital femoral epiphysis, using specimens obtained from immature dogs. Am J Vet Res 1993; 54:1770-3. [PMID: 8250406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Biomechanical strength and stiffness of 2 fixation treatments used to repair acute slipped capital femoral epiphysis were evaluated in bone specimens form immature dogs. A servohydraulic testing machine was used to create slipped capital femoral epiphysis in 7 pairs of femurs by shearing the capital femoral epiphysis along the physis in a craniocaudal direction. The slip was reduced and repaired with one 3.5-mm-diameter screw placed in lag fashion or 2 double-pointed, 1.6-mm (0.062 inch)-diameter smooth pins and retested. Strength and stiffness of each intact femur (which served as the control) and repaired femur were compared. Results of the study indicated that the failure strength of 2-pin fixation was significantly (P < 0.05) weaker than its control and the 1-screw fixation. There was no significant difference between failure strength of the 1-screw fixation and its control. The stiffness of 1-screw and 2-pin fixations was not significantly different, compared with each other, but was significantly (P < 0.05) less, compared with their respective controls.
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Affiliation(s)
- S M Belkoff
- Orthopaedic Biomechanics Laboratory, School of Medicine, University of Maryland, Baltimore 21201
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Belkoff SM, Millis DL, Probst CW. Biomechanical comparison of three internal fixations for treatment of slipped capital femoral epiphysis in immature dogs. Am J Vet Res 1992; 53:2136-40. [PMID: 1466512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
The biomechanical strength and stiffness of 3 fixation techniques used to repair acute slipped capital femoral epiphysis were evaluated in bone specimens from immature dogs. A servohydraulic testing machine was used to create slipped capital femoral epiphysis in 9 pairs of femurs by shearing the capital femoral epiphysis along the physis in a craniocaudal direction. The slip was reduced and repaired with 1, 2, or 3 double-pointed, 1.6-mm (0.062-inch) smooth pin(s) and retested. The strength and stiffness of each intact femur (which served as the control) and repaired femur were compared. Results of the study indicated that differences among the failure strengths of 1- and 2-pin fixations and their respective controls were not significant; however, the 3-pin fixation was 29% stronger than its control and was 60 and 45% stronger than the 1- and 2-pin fixations, respectively. One- and 2-pin fixations were 34 and 24% less stiff than their respective controls, whereas the stiffness of the 3-pin fixation was similar to its control. The 2- and 3-pin fixations were 48 and 76% stiffer, respectively, than the 1-pin fixation, but were not significantly different, compared with each other.
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Affiliation(s)
- S M Belkoff
- Orthopaedic Biomechanics Laboratory, School of Medicine, University of Maryland, Baltimore 21201
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Knezevic PF, Fessl L. [Epiphysiolysis capitis femoris in a horse]. Dtsch Tierarztl Wochenschr 1982; 89:272-5. [PMID: 6751771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Hamilton GF, Turner AS, Ferguson JG, Pharr JW. Slipped capital femoral epiphysis in calves. J Am Vet Med Assoc 1978; 172:1318-22. [PMID: 659315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Matis U. [Wire tension treatment of distal epiphysiolyses as well as supracondylar femoral fractures in cat and dog]. Berl Munch Tierarztl Wochenschr 1977; 90:240-3. [PMID: 901404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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Matis U, Köstlin R. [Pressure osteosynthesis of canine and feline distal epiphysiolysis and supracondular fractures]. Berl Munch Tierarztl Wochenschr 1974; 87:196-200. [PMID: 4832195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Pobisch R, Geres V, Arbesser E. [Dysplasia of the elbow in the dog]. Wien Tierarztl Monatsschr 1972; 59:297-307. [PMID: 4629516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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Rosenberger. [Distal slipped epiphysis on the metatarsus (with medial dislocation) in a young cow]. Dtsch Tierarztl Wochenschr 1971; 78:565. [PMID: 4330452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Herrmann HJ. [Pathomorphological studies on epiphyseolysis in horse and cattle]. SCHWEIZ ARCH TIERH 1968; 110:234-42. [PMID: 5693688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Blenkinsopp WK, Blenkinsopp EC, Flack MB. Slipped femoral epiphysis in the coypu. J Pathol Bacteriol 1967; 93:690-693. [PMID: 6054065 DOI: 10.1002/path.1700930233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
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