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Sharma M, Sharma AK, Shukla SK. Potentiometric sensing of ibuprofen over ferric oxide doped chitosan grafted polypyrrole-based electrode. Int J Biol Macromol 2024; 268:131598. [PMID: 38621570 DOI: 10.1016/j.ijbiomac.2024.131598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 04/02/2024] [Accepted: 04/12/2024] [Indexed: 04/17/2024]
Abstract
The present work demonstrates the correlation between structure, properties, and self-sensing protocols of in situ prepared ferric oxide doped grafted copolymer composite, comprised of ferric oxide, chitosan, and polypyrrole (α-Fe2O3-en-CHIT-g-PPy) for residual ibuprofen present in natural and artificial samples. The chemical structure, morphology, functionality, and physio-mechanical properties of the composite were determined by Fourier transform infrared spectrometer (FT-IR), Raman spectra, X-ray diffraction (XRD), Scanning electron microscope (SEM), X-ray photoelectron spectroscopy (XPS), Two probe method, and standard ASTM techniques to explore sensing nature. The results confirm the evolution of axially aligned structure against 110 planes of α-Fe2O3 and chemically functionalized expanded polymer matrix during in-situ chemical polymerization of pyrrole, with better porosity, interactivity, and improved electrical conductivity i.e. 7.32 × 10-3 S cm-1. Further, a thin film of prepared composite coated on an ITO glass plate was explored for potentiometric sensing of ibuprofen (IBU) present in artificial and natural samples without the use of any additional energy sources. The observed sensing parameters are the sensing ranging 0.5 μM to 100.0 μM, sensitivity 2.5081 mV μM-1 cm-2, response time 50 s, recovery time 10 s, and stability for 60 days. The sensing mechanism of the IBU sensor and effective charge transfer in the electrode was also discussed based on changes in IR spectra of the electrode recorded before and after sensing due to surface oxidation of IBU due to the presence of iron and doping effect of iron oxide in the composite.
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Affiliation(s)
- Manisha Sharma
- Thin Film Laboratory, Department of Chemistry, Deenbandhu Chhotu Ram University of Science and Technology, Murthal 131039, India; Department of Polymer Science, Bhaskaracharya College of Applied Sciences, University of Delhi, Delhi 110075, India
| | - Ashok K Sharma
- Thin Film Laboratory, Department of Chemistry, Deenbandhu Chhotu Ram University of Science and Technology, Murthal 131039, India.
| | - Saroj Kr Shukla
- Department of Polymer Science, Bhaskaracharya College of Applied Sciences, University of Delhi, Delhi 110075, India.
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Kumari R, Kumar M, Seema K, Kumar A, Boipai M, Prasad ML, Sharma AK. Diagnostic Approaches to Helicobacter pylori: A Comparative Study of Detection in Gastric Biopsy and Aspirates. Cureus 2024; 16:e57100. [PMID: 38681443 PMCID: PMC11053382 DOI: 10.7759/cureus.57100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/27/2024] [Indexed: 05/01/2024] Open
Abstract
Background Helicobacter pylori is one of the most common bacterial pathogens in humans. It is a microaerophilic bacteria with multiple unipolar flagella. It is associated with the development of various lesions like chronic gastritis, gastric ulcers, adenocarcinoma, and mucosa-associated lymphomas. The aim of this study was a comparative evaluation of the rapid urease test (RUT) and polymerase chain reaction (PCR) in gastric biopsy and aspirates for the detection of H. pylori infection and to further determine the sensitivity and specificity of RUT and PCR. Method Endoscopic guided biopsy tissue and gastric aspirate specimens were collected from 110 patients with symptoms like gastritis, dyspepsia, etc., and subjected to RUT and PCR for detection of H. pylori infection. Results A total of 110 samples, including both biopsy tissue (77) and gastric aspirate (33) were subjected to RUT and PCR. RUT for biopsy tissue showed the highest sensitivity (97.18%), compared to gastric aspirate (78.94%). Comparing RUT with PCR, the sensitivity and specificity of PCR were 93.33% and 90.0%, respectively. The positive predictive value (PPV) of PCR was 97.67%, the negative predictive value (NPV) was 75.0%, and the accuracy was 92.73%. Conclusion The present study showed that RUT is a rapid and accurate invasive test for the detection of Helicobacter pylori infection in biopsy tissue as compared to gastric aspirate specimens, which are more sensitive to PCR. The study also showed that biopsy tissue was found to be a superior specimen for the detection of Helicobacter pylori as compared to gastric aspirate.
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Affiliation(s)
- Radha Kumari
- Microbiology, Rajendra Institute of Medical Sciences (RIMS), Ranchi, IND
| | - Manoj Kumar
- Microbiology, Rajendra Institute of Medical Sciences (RIMS), Ranchi, IND
| | - Kumari Seema
- Microbiology, Rajendra Institute of Medical Sciences (RIMS), Ranchi, IND
| | - Abhay Kumar
- Microbiology, Rajendra Institute of Medical Sciences (RIMS), Ranchi, IND
| | - Manju Boipai
- Microbiology, Rajendra Institute of Medical Sciences (RIMS), Ranchi, IND
| | | | - Ashok K Sharma
- Microbiology, Rajendra Institute of Medical Sciences (RIMS), Ranchi, IND
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Yadav A, Sharma N, Yadav S, Sharma AK, Kumar S. Revealing the interface chemistry of polyaniline grafted biomass via statistical modeling of multi-component dye systems: optimization, kinetics, thermodynamics, and adsorption mechanism. Environ Sci Pollut Res Int 2024; 31:21302-21325. [PMID: 38383933 DOI: 10.1007/s11356-024-32523-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 02/14/2024] [Indexed: 02/23/2024]
Abstract
The growing need to examine the adsorption capabilities of innovative materials in real-world water samples has encouraged a shift from single to multicomponent adsorption systems. In this study, a novel composite, PANI-g-SM was synthesized by covalently grafting a lignocellulosic biomass, Saccharum munja (SM) with polyaniline (PANI). The as-synthesized composite was investigated for the simultaneous adsorption of cationic (Methylene Blue (MB); Crystal Violet (CV)) and anionic dyes (Reactive Red 35 (RR); Fast Green FCF (FG)) from four single components and two binary systems, MB + RR and CV + FG. Further, the effect and interaction of pH (2-11), dosage (0.01-0.04 g/10 mL), and initial concentration (0.0313 to 0.1563 mmol/L) on the elimination of dyes by PANI-g-SM were studied through a novel design of Box-Behnken of Response Surface Methodology (RSM) technique which was found to be highly useful for revealing the chemistry of interfaces in multi-component systems. The extended Langmuir model for the binary system indicated the presence of synergism, as result the maximum monolayer adsorption capacity increased by 44.44%, 645.83%, 67.88%, and 441.07% for MB, RR, CV, and FG dye, respectively. Further, the adsorption process mainly followed a pseudo-second-order kinetic model, and the thermodynamic studies revealed the exothermic nature of adsorption for RR and FG dye while endothermic for MB and CV dye, respectively with Δ G varying from - 1.68 to - 6.12 kJ/mol indicating the spontaneity of the process. Importantly, the efficacy of the composite was evaluated for the treatment of textile industry effluent highlighting its potential as an adsorbent for wastewater treatment.
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Affiliation(s)
- Aruna Yadav
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana, 127031, India
| | - Nishita Sharma
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana, 127031, India
| | - Sarita Yadav
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana, 127031, India
| | - Ashok K Sharma
- Department of Chemistry, Deenbandhu Chhotu Ram University of Science and Technology, Murthal, Sonipat, Haryana, 131039, India
| | - Surender Kumar
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana, 127031, India.
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Albazali A, Mosbeh A, Manchanda Y, Ahmad A, Altaweel F, Mandani Y, Sharma AK. Intravascular Papillary Endothelial Hyperplasia Involving the Hand: A Case Report of a Rare Entity. Cureus 2023; 15:e50902. [PMID: 38249242 PMCID: PMC10799665 DOI: 10.7759/cureus.50902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/21/2023] [Indexed: 01/23/2024] Open
Abstract
Masson's tumor, also named intravascular papillary endothelial hyperplasia (IPEH), is a rare, benign vascular tumor. Evaluation by clinical features can be confused with other soft tissue tumors. Therefore, the diagnosis should be confirmed by histopathological examination. The patient reported here is 67 years old and came to us with a small painful lesion over the left thumb of about two months duration. Histopathological examination was consistent with Masson's tumor (IPEH) following excisional biopsy, with good functional outcomes. To the best of our knowledge, this is the first report of this entity from Kuwait. Dermatologists and surgeons should know about this rare entity and its unusual presentation, to be able to distinguish it from similar presenting serious conditions, especially angiosarcoma. Through this report, we purport to facilitate recognition of this condition apart from some other conditions it may mimic.
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Affiliation(s)
- Abeer Albazali
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
| | - Alsadat Mosbeh
- Department of Dermatology/Dermatopathology, Faculty of Medicine, Al-Azhar University, Cairo, EGY
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
| | - Yashpal Manchanda
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
| | - Adnan Ahmad
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
| | - Fatmah Altaweel
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
| | - Yasmeen Mandani
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
| | - Ashok K Sharma
- Department of Dermatology, Farwaniya Hospital, Ministry of Health, Kuwait, KWT
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Singh B, Seema K, Mahuli AV, Kumar A, Boipai M, Sharma AK, Kumar M, Kumar S, Chandra S, Shahi AK. Estimation of SARS-CoV-2 IgG Antibodies in Healthcare Worker-Administered Covishield and Covaxin Vaccines at a Tertiary Care Hospital in Jharkhand, India. Cureus 2023; 15:e47566. [PMID: 38021860 PMCID: PMC10666192 DOI: 10.7759/cureus.47566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/21/2023] [Indexed: 12/01/2023] Open
Abstract
Introduction To mitigate the impact of the COVID-19 pandemic caused by the SARS-CoV-2 virus, global distribution of vaccines such as Covishield and Covaxin has been undertaken. This research aimed to assess the responses and potential differences between these vaccines by examining the presence and levels of SARS-CoV-2 IgG antibodies in healthcare professionals who received them. Methodology A comprehensive cross-sectional study was conducted at a tertiary care facility in Ranchi involving 227 healthcare professionals who had completed both doses of either Covishield or Covaxin. Blood samples were collected and subjected to chemiluminescence immunoassay analysis to measure IgG antibodies. Demographic data, immunization records, and previous COVID-19 infections were recorded. Statistical analyses, including analysis of variance (ANOVA), linear regression, and independent sample t-tests were performed. Results Antibody titers exhibited variability, potentially influenced by factors. There was no difference in antibody titers between recipients of Covishield and Covaxin vaccines. Linear regression analysis revealed a correlation between antibody levels and the number of days after vaccination. Factors such as age, gender, blood group, and prior COVID-19 infections did not significantly impact antibody titers. Conclusions This study contributes to responses elicited by Covishield and Covaxin vaccines among healthcare workers. The results highlight that Covishield showed a higher mean titer value than Covaxin, which is not statistically significant. The overall model showed statistically significant results indicating age, type of vaccine, number of days after vaccination, blood group, and previous history of COVID-19 infection collectively influenced the CoV-2 IgG titer values. The findings indicate that age, number of days after vaccination, and prior history of COVID-19 infection have substantial relationships with the CoV-2 IgG titer, but sex, vaccine type, and blood group show lesser, nonsignificant associations.
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Affiliation(s)
- Bishnupati Singh
- Department of Prosthodontics, Dental Institute, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Kumari Seema
- Department of Microbiology, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Amit V Mahuli
- Department of Public Health Dentistry, Dental Institute, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Abhay Kumar
- Department of Microbiology, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Manju Boipai
- Department of Microbiology, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Ashok K Sharma
- Department of Microbiology, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Manoj Kumar
- Department of Microbiology, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Surender Kumar
- Department of Prosthodontics, Dental Institute, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Subhash Chandra
- Department of Orthodontics and Dentofacial Orthopaedics, Dental Institute, Rajendra Institute of Medical Sciences, Ranchi, IND
| | - Ajoy K Shahi
- Department of Oral and Maxillofacial Surgery, Dental Institute, Rajendra Institute of Medical Sciences, Ranchi, IND
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Swain RK, Mohanty SS, Thakor M, Sharma AK. Assessment of thermal and temporal stability of SARS-CoV-2 samples using real-time qRT-PCR. Mol Biol Rep 2023; 50:8565-8573. [PMID: 37644371 DOI: 10.1007/s11033-023-08740-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Accepted: 08/04/2023] [Indexed: 08/31/2023]
Abstract
BACKGROUND As per the guidelines of the Indian Council of Medical Research, nasopharyngeal and oropharyngeal swabs in viral transport medium (VTM) are to be stored at 4 °C for less than 5 days and for more than 5 days at -70 °C. Samples are not transported or stored as per prescribed conditions because of the limitations, resulting in an apprehensive diagnosis. The aim of the study was to test the stability of the SARS-CoV-2 sample stored in VTM at different temperatures. METHODS In this study, the stability of 21 positive and 9 negative samples for SARS-CoV-2 was evaluated in commercial VTM at different temperatures (-80 °C, -20 °C, 4 °C, and 25 to 30 °C). Stability was checked for up to 50 days in the above storage conditions at different intervals. PathoDetect™ and Hi-PCR® kits were used for the detection of the four genes of SARS-CoV-2. The Cycle Threshold (Ct) value for determining the positivity of samples for PathoDetect™ was < 40 and for Hi-PCR® was < 38. RESULTS The SARS-CoV-2 confirmatory genes (RdRp and E genes) and the internal housekeeping gene remained detectable even on the 50th day of the study. The Ct of the RdRp and E genes were found to increase with storage duration, but all positive samples remained positive till the end of the study, or the Ct value remained below the cut-off level. The negative samples gave consistent results until the end of the study. When the differences in Ct values were compared between the days in a set of experiments, they were not significantly different except in a few samples. CONCLUSION The SARS-CoV-2 genetic materials in commercial VTM were stable at room temperature to -80 °C for 50 days.
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Affiliation(s)
- Rohit Kumar Swain
- Department of Biological Sciences and Engineering, MANIT, Bhopal, India
| | - S S Mohanty
- Virology Laboratory, Indian Council of Medical Research- National Institute for Implementation Research on Non-Communicable Diseases (ICMR-NIIRNCD), New Pali Road, Jodhpur, 342005, Rajasthan, India.
| | - Mahendra Thakor
- Virology Laboratory, Indian Council of Medical Research- National Institute for Implementation Research on Non-Communicable Diseases (ICMR-NIIRNCD), New Pali Road, Jodhpur, 342005, Rajasthan, India
| | - A K Sharma
- Virology Laboratory, Indian Council of Medical Research- National Institute for Implementation Research on Non-Communicable Diseases (ICMR-NIIRNCD), New Pali Road, Jodhpur, 342005, Rajasthan, India
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Sarode GV, Mazi TA, Neier K, Shibata NM, Jospin G, Harder NH, Caceres A, Heffern MC, Sharma AK, More SK, Dave M, Schroeder SM, Wang L, LaSalle JM, Lutsenko S, Medici V. The role of intestine in metabolic dysregulation in murine Wilson disease. Hepatol Commun 2023; 7:e0247. [PMID: 37695076 PMCID: PMC10497250 DOI: 10.1097/hc9.0000000000000247] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/27/2023] [Accepted: 06/24/2023] [Indexed: 09/12/2023] Open
Abstract
BACKGROUND The clinical manifestations of Wilson disease (WD) are related to copper accumulation in the liver and the brain, but little is known about other tissue involvement regarding metabolic changes in WD. In vitro studies suggested that the loss of intestinal ATP7B affects metabolic dysregulation in WD. We tested this hypothesis by evaluating the gut microbiota and lipidome in 2 mouse models of WD and by characterizing a new mouse model with a targeted deletion of Atp7b in the intestine. METHODS Cecal content 16S sequencing and untargeted hepatic and plasma lipidome analyses in the Jackson Laboratory toxic-milk and the Atp7b null global knockout mouse models of WD were profiled and integrated. Intestine-specific Atp7b knockout mice (Atp7bΔIEC) were generated and characterized using targeted lipidome analysis following a high-fat diet challenge. RESULTS Gut microbiota diversity was reduced in animal models of WD. Comparative prediction analysis revealed amino acid, carbohydrate, and lipid metabolism functions to be dysregulated in the WD gut microbial metagenome. Liver and plasma lipidomic profiles showed dysregulated triglyceride and diglyceride, phospholipid, and sphingolipid metabolism in WD models. However, Atp7bΔIEC mice did not show gut microbiome differences compared to wild type. When challenged with a high-fat diet, Atp7bΔIEC mice exhibited profound alterations to fatty acid desaturation and sphingolipid metabolism pathways as well as altered APOB48 distribution in intestinal epithelial cells. CONCLUSIONS Gut microbiome and lipidome underlie systemic metabolic manifestations in murine WD. Intestine-specific ATP7B deficiency affected both intestinal and systemic response to a high-fat challenge but not the microbiome profile, at least at early stages. WD is a systemic disease in which intestinal-specific ATP7B loss and diet influence the phenotype and the lipidome profile.
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Affiliation(s)
- Gaurav V. Sarode
- Department of Internal Medicine, Division of Gastroenterology and Hepatology, UC Davis, Sacramento, California, USA
| | - Tagreed A. Mazi
- Department of Community Health Sciences - Clinical Nutrition, College of Applied Medical Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Kari Neier
- Department of Medical Microbiology and Immunology, UC Davis School of Medicine, Genome Center, MIND Institute, Davis, California, USA
| | - Noreene M. Shibata
- Department of Internal Medicine, Division of Gastroenterology and Hepatology, UC Davis, Sacramento, California, USA
| | | | - Nathaniel H.O. Harder
- Department of Chemistry, University of California Davis Genome Center, Davis, California, USA
| | - Amanda Caceres
- Department of Chemistry, University of California Davis Genome Center, Davis, California, USA
| | - Marie C. Heffern
- Department of Chemistry, University of California Davis Genome Center, Davis, California, USA
| | - Ashok K. Sharma
- Department of Gastroenterology, Inflammatory Bowel & Immunology Research Institute, Cedars Sinai Medical Center, Los Angeles, California, USA
| | - Shyam K. More
- Cedars Sinai Medical Center, F. Widjaja Foundation Inflammatory Bowel Disease Institute, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, California, USA
| | - Maneesh Dave
- Department of Internal Medicine, Division of Gastroenterology and Hepatology, UC Davis, Sacramento, California, USA
| | - Shannon M. Schroeder
- Department of Internal Medicine, Division of Gastroenterology and Hepatology, UC Davis, Sacramento, California, USA
| | - Li Wang
- Department of Physiology, Johns Hopkins University, School of Medicine, Baltimore, Maryland, USA
| | - Janine M. LaSalle
- Department of Medical Microbiology and Immunology, UC Davis School of Medicine, Genome Center, MIND Institute, Davis, California, USA
| | - Svetlana Lutsenko
- Department of Physiology, Johns Hopkins University, School of Medicine, Baltimore, Maryland, USA
| | - Valentina Medici
- Department of Internal Medicine, Division of Gastroenterology and Hepatology, UC Davis, Sacramento, California, USA
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Garg P, Bajaj S, Sharma AK, Narang P, Bansal K. Case 314: Cerebral Proliferative Angiopathy. Radiology 2023; 307:e220112. [PMID: 37367446 DOI: 10.1148/radiol.220112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/28/2023]
Abstract
HISTORY An 18-year-old man presented to the neurosurgery outpatient department with recurrent episodes of epistaxis for the past 8 years and altered behavior for the past month. Epistaxis was scanty in amount, intermittent, spontaneous, and not associated with any trauma or nasal obstruction or breathing difficulties. Bleeding used to stop spontaneously after some time. There was no history of associated headache, seizures, vomiting, fever, or loss of consciousness. On physical examination, the patient was afebrile, with normal vital signs and normal Glasgow Coma Scale score (15 of 15) at the time of presentation. Multiple dilated engorged veins were visible on the forehead; however, there was no evidence of abnormal skin pigmentation. Neurologic examination yielded findings that were within normal limits. Laboratory examinations revealed a hemoglobin level of 11 g/dL (normal range, 13.2-16.6 g/dL), with the rest of the parameters within normal limits. This patient underwent unenhanced CT of the brain and paranasal sinuses followed by contrast-enhanced MRI of the brain for further evaluation.
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Affiliation(s)
- Priyanka Garg
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Sachin Bajaj
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Ashok K Sharma
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Poonam Narang
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Kalpana Bansal
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
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Saharan P, Kumar V, Kaushal I, Mittal A, Shukla SK, Kumar D, Sharma AK, Om H. A comprehensive review on the metal-based green valorized nanocomposite for the remediation of emerging colored organic waste. Environ Sci Pollut Res Int 2023; 30:45677-45700. [PMID: 36826768 DOI: 10.1007/s11356-023-25998-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Accepted: 02/14/2023] [Indexed: 04/15/2023]
Abstract
In today's era, "green" synthesis is an emerging research trend. It has gained widespread attention owing to its dynamic behavior, reliability, simplicity, sustainability, and environment friendly approach for fabricating various nanomaterials. Green fabrication of metal/metal oxides nanomaterials, hybrid materials, and other metal-based nanocomposite can be utilized to remove toxic colored aqueous pollutants. Nanomaterials synthesized by using green approach is considered to be the significant tool to minimize unwanted or harmful by-products otherwise released from traditional synthesis methods. Various kinds of biosynthesized nanomaterials, such as animal waste and plant-based, have been successfully applied and well documented in the literature. However, their application part, especially for the cure of colored organic polluted water, has not been reported as a single review article. Therefore, the current work aims to assemble reports on using novel biosynthesized green metal-based nanomaterials to exclude harmful dyes from polluted water.
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Affiliation(s)
- Priya Saharan
- Centre of Excellence for Energy and Environment, DeenbandhuChhotu Ram University of Science and Technology, Murthal, Sonipat, India
| | - Vinit Kumar
- Central Instrumentation Laboratory, DeenbandhuChhotu Ram University of Science and Technology, Murthal, Sonipat, India
| | - Indu Kaushal
- Department of Chemistry, DeenbandhuChhotu Ram University of Science and Technology, Murthal, Sonipat, India
| | - Alok Mittal
- Department of Chemistry, Maulana Azad National Institute of Technology, Bhopal, India
| | - Saroj K Shukla
- Department of Polymer Science, Bhaskaryacharya College of Applied Sciences, Delhi, India
| | - Dharmender Kumar
- Department of Biotechnology, DeenbandhuChhotu Ram University of Science and Technology, Murthal, Sonipat, India
| | - Ashok K Sharma
- Department of Chemistry, DeenbandhuChhotu Ram University of Science and Technology, Murthal, Sonipat, India.
| | - Hari Om
- Department of Chemistry, DeenbandhuChhotu Ram University of Science and Technology, Murthal, Sonipat, India
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Sharma M, Mathesh K, Dandapat P, Mariappan AK, Kumar R, Kumari S, Kapur V, Maan S, Jindal N, Bansal N, Kadiwar R, Kumar A, Gupta N, Pawde AM, Sharma AK. Emergence of Mycobacterium orygis-Associated Tuberculosis in Wild Ruminants, India. Emerg Infect Dis 2023; 29:661-663. [PMID: 36823735 PMCID: PMC9973683 DOI: 10.3201/eid2903.221228] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/25/2023] Open
Abstract
Tuberculosis caused by Mycobacterium orygis was detected in 2 spotted deer from a wildlife sanctuary in western India and an Indian bison from a national park in central India. Nationwide surveillance is urgently required to clarify the epidemiology of the Mycobacterium tuberculosis complex at the human-livestock-wildlife interface.
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Garg P, Bajaj S, Sharma AK, Narang P, Bansal K. Case 314. Radiology 2023; 306:e220111. [PMID: 36689346 DOI: 10.1148/radiol.220111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
HISTORY An 18-year-old man presented to the neurosurgery outpatient department with recurrent episodes of epistaxis for the past 8 years and altered behavior for the past month. Epistaxis was scanty in amount, intermittent, spontaneous, and not associated with any trauma or nasal obstruction or breathing difficulties. Bleeding used to stop spontaneously after some time. There was no history of associated headache, seizures, vomiting, fever, or loss of consciousness. On physical examination, the patient was afebrile, with normal vital signs and normal Glasgow Coma Scale score (15 of 15) at the time of presentation. Multiple dilated engorged veins were visible on the forehead; however, there was no evidence of abnormal skin pigmentation. Neurologic examination yielded findings that were within normal limits. Laboratory examinations revealed a hemoglobin level of 11 g/dL (normal range, 13.2-16.6 g/dL), with the rest of the parameters within normal limits. This patient underwent unenhanced CT of the brain and paranasal sinuses followed by contrast-enhanced MRI of the brain for further evaluation (Figs 1-3).
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Affiliation(s)
- Priyanka Garg
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Sachin Bajaj
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Ashok K Sharma
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Poonam Narang
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
| | - Kalpana Bansal
- From the Department of Radiology, Govind Ballabh Pant Institute of Post Graduate Medical Education and Research, 1 Jawaharlal Nehru Marg, 64 Khamba, Raj Ghat, New Delhi, Delhi 110002, India
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Chaudhary G, Pradhan AK, Shah S, Roy S, Singh V, Dwivedi SK, Sethi R, Chandra S, Vishwakarma P, Sharma AK, Bhandari M, Shukla A, Singh A. Unraveling the invisible demon: a study of the oxidative stress markers, antioxidant activities and inflammatory markers in patients admitted with complete heart block. Eur Heart J 2023. [DOI: 10.1093/eurheartj/ehac779.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
Abstract
Funding Acknowledgements
Type of funding sources: None.
Introduction
Despite the recent advancements in the management of Complete Heart Block (CHB), the aetiology of CHB is still idiopathic in most of the cases. Our study explores this hitherto untouched aspect of complete heart block.
Purpose
We aimed to assess the aetiological profile of Complete Heart Block patients in our study.
Methods
The study population consisted of 60 patients with complete heart block aged between 30 to 80 years, attending as an inpatient in ER. Oxidative stress was measured by serum MDA, serum GSH, serum Catalase activity and serum SOD activity. Antioxidant activity was obtained by measuring the levels of serum total antioxidant capacity. Inflammatory stress was measured by IL-5 and TNF-alpha levels. These values were compared to 30 healthy controls with no prior history of smoking and diabetes mellitus.
Results
The mean age of the patient was 62.48 ± 7.98 years and the gender distribution was 37 males and 23 females out of 60 patients. The mean value of serum MDA (ng/mL) in cases is 1451.26 ± 206.32, and in controls, the mean value is 1197.98 ± 234.71 (p=<0.001). The mean value of serum GSH (mcg/mL) in cases is 46.982 ± 18.613, and in controls, the mean value is 54.155 ± 10.762 (p=0.027). The mean value of serum Catalase Activity (U/min/mg protein) in cases is 10.763 ± 4.038 and in controls, the mean value is 19.878 ± 7.787 (p=0.003). The mean value of serum SOD Activity (U/g) in cases is 24.950 ± 5.4565, and in controls, the mean value is 46.214 ± 14.6309 (p=0.891). The mean value of serum Total Antioxidant Capacity (U/mL) in cases is 5.546 ± 0.620 and in controls, the mean value is 8.346 ± 2.781 (p=0.025). The mean value of serum IL-5 (pg/mL) in cases is 481.442 ± 28.8995, and in controls, the mean value is 67.347 ± 20.445 (p<0.001). The mean value of serum TNF-ALFA (pg/mL) in cases is 196.741 ± 73.771, and in controls, the mean value is 144.530 ± 42.599 (p= 0.081).
Conclusions
During a complete heart block, SOD (p=0.891), CAT (p=0.003), GSH (p=0.027) and total antioxidant (TAOC) (p=0.025) were significantly decreased in cases, compared to healthy controls, thus suggesting that the elevated levels of oxidative free radicals causes endothelial dysfunctioning. The increase in ROS was observed by a highly significant increase of malondialdehyde (MDA) (p=<0.001) showing high ROS-mediated tissue damage. Besides damage by oxidative stress, our study suggests that there are certain inflammatory markers like TNF-α and IL-5 that actively participate in causing heart block. There was a significant increase in the concentration of IL-5 (p<0.001) in the cases as compared to the controls.
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Affiliation(s)
- G Chaudhary
- King George's Medical University , Lucknow , India
| | - A K Pradhan
- King George's Medical University , Lucknow , India
| | - S Shah
- King George's Medical University , Lucknow , India
| | - S Roy
- King George's Medical University , Lucknow , India
| | - V Singh
- King George's Medical University , Lucknow , India
| | - S K Dwivedi
- King George's Medical University , Lucknow , India
| | - R Sethi
- King George's Medical University , Lucknow , India
| | - S Chandra
- King George's Medical University , Lucknow , India
| | | | - A K Sharma
- King George's Medical University , Lucknow , India
| | - M Bhandari
- King George's Medical University , Lucknow , India
| | - A Shukla
- King George's Medical University , Lucknow , India
| | - A Singh
- King George's Medical University , Lucknow , India
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13
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Roy S, Singh V, Ahmed J, Dwivedi SK, Sethi R, Chandra S, Pradhan AK, Vishwakarma P, Sharma AK, Bhandari M, Shukla A, Singh A, Chaudhary G. The surprises in optical coherence tomography (OCT) findings in patients presenting with in-stent restenosis: the road less travelled. Eur Heart J 2023. [DOI: 10.1093/eurheartj/ehac779.056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
Abstract
Funding Acknowledgements
Type of funding sources: None.
Background
Morphological features of neointimal tissue play a pivotal role in the pathophysiology of In-Stent Restenosis (ISR) after percutaneous coronary intervention, hence understanding these features and patterns is crucial.
Purpose
The present study was designed to qualitatively and quantitatively assess neointimal characteristics of lesions using OCT in patients presenting with ISR.
Methods
This was a single-center, prospective, observational study performed between 1st August 2020 and 30th December 2021 at a tertiary-care center in India. Patients diagnosed with stable angina and acute coronary syndrome with post-procedural angiographically documented restenosis (>50%) were included. Qualitative and quantitative assessment of neointimal hyperplasia patterns was performed using OCT.
Results
A total of 34 patients with ISR were studied. Neointimal hyperplasia was classified as (i) homogenous group (n=18) and (ii) non-homogenous group (n=16). As many as 14 (77.8%) diabetics belonged to the homogenous group. Predominant plaque characteristics such as neoatherosclerosis, cholesterol crystals, and calcium were documented in 14 (77.8%), 12 (66.7%), and 11 (61.1%) patients in the homogenous group and in 10 (62.5%), 10 (62.5%), and 9 (56.2%) patients in the non-homogenous group, respectively. Unexpanded stent struts were identified in 11 (61.1%) and 11 (68.8%) patients in the homogenous and non-homogenous groups, respectively. Mean strut thickness was 93.73 ± 31.03 µm and 83.54 ± 18.0 µm, ISR was 72.50 ± 15.93% and 65.37 ± 21.69%, the neointimal thickness was 588.06 ± 167.82 mm and 666.25 ± 218.05 mm, and neointimal hyperplasia was 54.54 ± 11.23% and 59.26 ± 8.86% in the homogenous and non-homogenous groups, respectively.
Conclusion
Neoatherosclerosis and stent underexpansion was predominantly observed in our study, which was in contrast to most of the existing literature [1,2,3], and only diabetes was found to be significantly associated with homogenous neointimal hyperplasia, irrespective of the generation of the stent.
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Affiliation(s)
- S Roy
- King George's Medical University , Lucknow , India
| | - V Singh
- King George's Medical University , Lucknow , India
| | - J Ahmed
- King George's Medical University , Lucknow , India
| | - S K Dwivedi
- King George's Medical University , Lucknow , India
| | - R Sethi
- King George's Medical University , Lucknow , India
| | - S Chandra
- King George's Medical University , Lucknow , India
| | - A K Pradhan
- King George's Medical University , Lucknow , India
| | | | - A K Sharma
- King George's Medical University , Lucknow , India
| | - M Bhandari
- King George's Medical University , Lucknow , India
| | - A Shukla
- King George's Medical University , Lucknow , India
| | - A Singh
- King George's Medical University , Lucknow , India
| | - G Chaudhary
- King George's Medical University , Lucknow , India
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14
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Sarode GV, Mazi TA, Neier K, Shibata NM, Jospin G, Harder NHO, Heffern MC, Sharma AK, More SK, Dave M, Schroeder SM, Wang L, LaSalle JM, Lutsenko S, Medici V. The role of intestine in metabolic dysregulation in murine Wilson disease. bioRxiv 2023:2023.01.13.524009. [PMID: 36711483 PMCID: PMC9882126 DOI: 10.1101/2023.01.13.524009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Background and aims Major clinical manifestations of Wilson disease (WD) are related to copper accumulation in the liver and the brain, and little is known about other tissues involvement in metabolic changes in WD. In vitro studies suggested that the loss of intestinal ATP7B could contribute to metabolic dysregulation in WD. We tested this hypothesis by evaluating gut microbiota and lipidome in two mouse models of WD and by characterizing a new mouse model with a targeted deletion of Atp7b in intestine. Methods Cecal content 16S sequencing and untargeted hepatic and plasma lipidome analyses in the Jackson Laboratory toxic-milk and the Atp7b null global knockout mouse models of WD were profiled and integrated. Intestine-specific Atp7b knockout mice ( Atp7b ΔIEC ) was generated using B6.Cg-Tg(Vil1-cre)997Gum/J mice and Atp7b Lox/Lox mice, and characterized using targeted lipidome analysis following a high-fat diet challenge. Results Gut microbiota diversity was reduced in animal models of WD. Comparative prediction analysis revealed amino acid, carbohydrate, and lipid metabolism functions to be dysregulated in the WD gut microbial metagenome. Liver and plasma lipidomic profiles showed dysregulated tri- and diglyceride, phospholipid, and sphingolipid metabolism in WD models. When challenged with a high-fat diet, Atp7b ΔIEC mice exhibited profound alterations to fatty acid desaturation and sphingolipid metabolism pathways as well as altered APOB48 distribution in intestinal epithelial cells. Conclusion Coordinated changes of gut microbiome and lipidome analyses underlie systemic metabolic manifestations in murine WD. Intestine-specific ATP7B deficiency affected both intestinal and systemic response to a high-fat challenge. WD is a systemic disease in which intestinal-specific ATP7B loss and diet influence phenotypic presentations.
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15
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Luis JV, Andréeacute;s VD, Levano KS, Pedro NB, Marco MR, Ruth GDLG, Rony CC, Diana PL, Sharma AK, Samuel D, Pedro o FV, Raul J C, A G, Ruth SS, Heinner G. Analysis of microbiome diversity in coprolites from Caral, Peru. Bioinformation 2022; 18:1159-1165. [PMID: 37701514 PMCID: PMC10492910 DOI: 10.6026/973206300181159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 12/20/2022] [Accepted: 12/31/2022] [Indexed: 09/14/2023] Open
Abstract
We analyzed human coprolites from the Sacred City of Caral, the oldest civilization in America (3000- and 1800-years BC). Our objective was to know the microbial diversity of the Caral Civilization through the use of a mobile ancient laboratory. DNA extraction conducted in a mobile laboratory placed near the collection site to reduce exposure of samples to contaminants and favor a rapid molecular processing. Using 16S rRNA and ITS 1 amplicon sequencing, we have elaborated the first list of the microbiomes of Caral, based on the bacterial and fungal community fingerprints detected in the coprolites recovered in six sectors of that ancient urban center. Among the most abundant sequences were those associated with Firmicutes for bacteria, Ascomycota and Basidiomycota for fungi. Bacillus was the most abundant bacterial genera in all samples analyzed, compromising up to 24.81% of the total bacterial abundance; while Aspergillus (11.43%) was the most abundant genera among fungal communities.
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Affiliation(s)
- Jaramillo-Valverde Luis
- ALBIOTEC, Lima, Perú
- INBIOMEDIC Research and Technological Center, Lima, Perú
- Universidad de Huánuco, Huánuco, Perú
| | - Váaacute;squez-Domínguez Andréeacute;s
- ALBIOTEC, Lima, Perú
- INBIOMEDIC Research and Technological Center, Lima, Perú
- Facultad de Ciencias Biolóoacute;gicas, Universidad Nacional Mayor de San Marcos, Lima, Perú
| | - Kelly S Levano
- ALBIOTEC, Lima, Perú
- INBIOMEDIC Research and Technological Center, Lima, Perú
| | - Novoa-Bellota Pedro
- Zona Arqueológica Caral, Unidad Ejecutora 003, Ministerio de Cultura., Lima, Perú
- Escuela Profesional de ArqueologÍa, Facultad de Ciencias Sociales, Universidad Nacional Mayor de San Marcos, Lima, Perú
| | | | - Garcia-de-la-Guarda Ruth
- Laboratorio de MicrobiologÍa Molecular y BiotecnologÍa, Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Perú
| | | | | | - Ashok K Sharma
- Department of Animal Science, University of Minnesota, St. Paul, MN
| | - Davison Samuel
- Department of Animal Science, University of Minnesota, St. Paul, MN
| | | | - Cano Raul J
- Centro de Investigación en Biodiversidad para la Salud, Universidad Privada Norbert Wiener, Lima, Perú; +These authors contributed equally to the article
| | - Gomez A
- Department of Animal Science, University of Minnesota, St. Paul, MN
| | - Shady-Solis Ruth
- Zona Arqueológica Caral, Unidad Ejecutora 003, Ministerio de Cultura., Lima, Perú
- Escuela Profesional de ArqueologÍa, Facultad de Ciencias Sociales, Universidad Nacional Mayor de San Marcos, Lima, Perú
| | - Guio Heinner
- ALBIOTEC, Lima, Perú
- INBIOMEDIC Research and Technological Center, Lima, Perú
- Centro de Investigación en Biodiversidad para la Salud, Universidad Privada Norbert Wiener, Lima, Perú; +These authors contributed equally to the article
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16
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Das P, Arora S, Sharma P, Nath SK, Sivasami K, Singh GK, Bahuguna A, Sapra D, Singh N, Sharma AK, Verma P, Bellad P, Gupta A, G B P, Ranjan Das DS. Gastrointestinal: IgA vasculitis as a rare cause of acute pancreatitis. J Gastroenterol Hepatol 2022; 37:2027. [PMID: 35315539 DOI: 10.1111/jgh.15814] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Revised: 01/11/2022] [Accepted: 02/08/2022] [Indexed: 12/09/2022]
Affiliation(s)
- P Das
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - S Arora
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - P Sharma
- Department of Lab Sciences and Molecular Medicine, Army Hospital Research and Referral, New Delhi, India
| | - S K Nath
- Department of Radiodiagnosis, Military Hospital Meerut, Uttar Pradesh, India
| | - K Sivasami
- Department of Rheumatology, Army Hospital Research and Referral, New Delhi, India
| | - G K Singh
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - A Bahuguna
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - D Sapra
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - N Singh
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - A K Sharma
- Office of Director General Medical Services, New Delhi, India
| | - P Verma
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - P Bellad
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - A Gupta
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - P G B
- Department of Dermatology, Base Hospital Delhi Cantt and Army College of Medical Sciences, New Delhi, India
| | - D S Ranjan Das
- Department of Radiodiagnosis and Imaging, Military Hospital Jabalpur, Madhya Pradesh, India
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17
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Chandramohan S, Mathesh K, Mallord JW, Naidoo V, Mahendran K, Kesavan M, Gaur GK, Pawde AM, Prakash N, Ranade S, Saikia D, Sharma AK, Shringarpure R, Green RE, Prakash VM. Metabolism of aceclofenac to diclofenac in the domestic water buffalo Bubalus bubalis confirms it as a threat to Critically Endangered Gyps vultures in South Asia. Environ Toxicol Pharmacol 2022; 96:103984. [PMID: 36182041 DOI: 10.1016/j.etap.2022.103984] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Revised: 09/21/2022] [Accepted: 09/27/2022] [Indexed: 06/16/2023]
Abstract
Vulture declines in South Asia were caused by accidental poisoning by the veterinary non-steroidal anti-inflammatory drug (NSAID) diclofenac. Although veterinary use of diclofenac has been banned, other vulture-toxic NSAIDs are legally available, including aceclofenac, which has been shown to metabolise into diclofenac in domestic cattle. We gave nine domestic water buffalo the recommended dose of aceclofenac (2 mg kg-1 body weight), collected blood at intervals up to 48 h, and carried out a pharmacokinetic analysis of aceclofenac and its metabolite diclofenac in plasma. Aceclofenac was rapidly converted to diclofenac, and was barely detectable in plasma at any sampling time. Diclofenac was present within 20 min, and peaked 4-8 h after dosing. Aceclofenac is a prodrug of diclofenac, and behaves similarly in domestic water buffalo as it did in domestic cattle, posing the same risk to vultures. We recommend an immediate ban on the veterinary use of aceclofenac across vulture-range countries.
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Affiliation(s)
- S Chandramohan
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Karikalan Mathesh
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - John W Mallord
- RSPB Centre for Conservation Science, Royal Society for the Protection of Birds, The Lodge, Sandy, Bedfordshire SG19 2DL, UK.
| | - Vinny Naidoo
- Department of Paraclinical Sciences, Faculty of Veterinary Science, University of Pretoria, Onderstepoort, Gauteng 0110, South Africa
| | - K Mahendran
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Manickam Kesavan
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Gyanendra K Gaur
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Abhijit M Pawde
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Nikita Prakash
- Bombay Natural History Society, Hornbill House, Opp Lion Gate, Shaheed Bhagat Singh Road, Fort, Mumbai 400 001, Maharashtra, India
| | - Sachin Ranade
- Bombay Natural History Society, Hornbill House, Opp Lion Gate, Shaheed Bhagat Singh Road, Fort, Mumbai 400 001, Maharashtra, India
| | - Debasish Saikia
- Bombay Natural History Society, Hornbill House, Opp Lion Gate, Shaheed Bhagat Singh Road, Fort, Mumbai 400 001, Maharashtra, India
| | - A K Sharma
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Rohan Shringarpure
- Bombay Natural History Society, Hornbill House, Opp Lion Gate, Shaheed Bhagat Singh Road, Fort, Mumbai 400 001, Maharashtra, India
| | - Rhys E Green
- Conservation Science Group, Department of Zoology, University of Cambridge, David Attenborough Building, Cambridge CB2 3QZ, UK
| | - Vibhu M Prakash
- Bombay Natural History Society, Hornbill House, Opp Lion Gate, Shaheed Bhagat Singh Road, Fort, Mumbai 400 001, Maharashtra, India
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18
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Gautam YP, Sharma AK, Kumar D, Kumar V, Tripathi AR, Kumar J, Saradhi IV, Kumar AV. SITE-SPECIFIC DRY AND WET DEPOSITION VELOCITIES USING 7BE AND MASS INTERCEPTION FACTOR FOR VARIOUS TYPES OF PLANT LEAVES AT NARORA SITE, INDIA. Radiat Prot Dosimetry 2022; 198:1258-1264. [PMID: 35870198 DOI: 10.1093/rpd/ncac155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 05/10/2022] [Accepted: 05/10/2022] [Indexed: 06/15/2023]
Abstract
Comprehensive studies were carried out during the period 2016-19 on the estimation of site-specific wet and dry deposition velocities and the mass interception factor for Narora site based on the concentrations of 7Be in air, air deposits, rain water and vegetation samples. Mean wet and dry deposition velocities for Narora site were found to be 1.64E-2 and 1.58E-3 m s-1, respectively. Mass interception factors for vegetation found to be 0.34-2.51 m2 kg-1 dry weight with a mean of 0.97 m2 kg-1 dry weight. The obtained parameters shall be used for estimation of impact due to radionuclide related to Narora Atomic Power station.
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Affiliation(s)
- Y P Gautam
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
| | - A K Sharma
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
| | - Deepak Kumar
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
| | - Vineet Kumar
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
| | - A R Tripathi
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
| | - J Kumar
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
| | - I V Saradhi
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
- EMAD, BARC, Trombay, Mumbai, India
| | - A Vinod Kumar
- Environmental Survey Laboratory, Department: Environmental Monitoring & Assessment Division, BARC, Narora Atomic Power Station, Narora, Bulandshahar, U.P. 202 389, India
- EMAD, BARC, Trombay, Mumbai, India
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19
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Moussa DG, Sharma AK, Mansour TA, Witthuhn B, Perdigão J, Rudney JD, Aparicio C, Gomez A. Functional signatures of ex-vivo dental caries onset. J Oral Microbiol 2022; 14:2123624. [PMID: 36189437 PMCID: PMC9518263 DOI: 10.1080/20002297.2022.2123624] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 08/09/2022] [Accepted: 08/18/2022] [Indexed: 11/18/2022] Open
Abstract
Background The etiology of dental caries remains poorly understood. With the advent of next-generation sequencing, a number of studies have focused on the microbial ecology of the disease. However, taxonomic associations with caries have not been consistent. Researchers have also pursued function-centric studies of the caries microbial communities aiming to identify consistently conserved functional pathways. A major question is whether changes in microbiome are a cause or a consequence of the disease. Thus, there is a critical need to define conserved functional signatures at the onset of dental caries. Methods Since it is unethical to induce carious lesions clinically, we developed an innovative longitudinal ex-vivo model integrated with the advanced non-invasive multiphoton second harmonic generation bioimaging to spot the very early signs of dental caries, combined with 16S rRNA short amplicon sequencing and liquid chromatography-mass spectrometry-based targeted metabolomics. Findings For the first time, we induced longitudinally monitored caries lesions validated with the scanning electron microscope. Consequently, we spotted the caries onset and, associated with it, distinguished five differentiating metabolites - Lactate, Pyruvate, Dihydroxyacetone phosphate, Glyceraldehyde 3-phosphate (upregulated) and Fumarate (downregulated). Those metabolites co-occurred with certain bacterial taxa; Streptococcus, Veillonella, Actinomyces, Porphyromonas, Fusobacterium, and Granulicatella, regardless of the abundance of other taxa. Interpretation These findings are crucial for understanding the etiology and dynamics of dental caries, and devising targeted interventions to prevent disease progression.
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Affiliation(s)
- Dina G. Moussa
- Minnesota Dental Research Center for Biomaterials and Biomechanics, Department of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA
- Department of Animal Science, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St Paul, Minnesota, USA
| | - Ashok K. Sharma
- Department of Animal Science, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St Paul, Minnesota, USA
| | - Tamer A Mansour
- Department of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA, USA
- Department of Clinical Pathology, School of Medicine, Mansoura University, Mansoura, Egypt
| | - Bruce Witthuhn
- Center for Mass Spectrometry and Proteomics, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, Minnesota, USA
| | - Jorge Perdigão
- Department of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA
| | - Joel D. Rudney
- Department of Diagnostic and Biological Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA
| | - Conrado Aparicio
- Minnesota Dental Research Center for Biomaterials and Biomechanics, Department of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA
- Department of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA
| | - Andres Gomez
- Department of Animal Science, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St Paul, Minnesota, USA
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20
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Sharma M, Karikalan M, Dandapat P, Asok Kumar M, Beena V, Chandra Mohan S, Ilayaraja S, Mathur A, Bhawal A, Pawde AM, Sharma AK. Tuberculosis in free-ranging and captive wild animals: Pathological and molecular diagnosis with histomorphological differentiation of granulomatous lesions. Microb Pathog 2022; 172:105752. [PMID: 36108989 DOI: 10.1016/j.micpath.2022.105752] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 08/29/2022] [Accepted: 08/31/2022] [Indexed: 10/31/2022]
Abstract
Tuberculosis (TB) is a serious zoonotic threat, impacting the human-livestock-wildlife interface globally. Here, we evaluated the status and histomorphological differentiation of TB lesions in 89 morbid cases of wild animals (bovids, cervids, carnivores, non-human primates, and pachyderms) in India. Histomorphological and molecular studies were done using Ziehl-Neelsen (ZN) staining, immunohistochemistry, and polymerase chain reaction (PCR), whereas cultural isolation was performed on selected samples. A total of 32 (35.95%) cases were confirmed as TB, comprising of 12 carnivores, 09 bovids, 06 cervids, 04 non-human primates, and a pachyderm. The TB lesions in the lungs, liver, and lymph nodes varied from the large-sized caseous nodules filled with dry cheesy material in bovids and cervids to variable-sized cavitations containing liquefied caseum in carnivores' lungs. The lungs, livers, and spleens of non-human primates exhibited small to medium-sized nodules. Histologically, lesions were divided into four categories (Types I, II, III, and IV) based on the extent of necrosis, the presence of mineralization, giant cells, and fibrous encapsulation. Extensive caseous necrosis with calcification, abundant giant cells, and thick fibroblastic encapsulation were consistent findings in the lungs, livers, and lymph nodes of bovids and cervids, whereas airway impaction with cellular exudate containing a teeming number of acid-fast bacilli and, at times, alveolar rupture leading to cavity formation was present in the lungs of carnivores. Absence of calcification and fibrous encapsulation was recorded in lungs of non-human primates. Immunohistochemical labelling with anti-early secretory antigenic target-6 (ESAT-6) and culture filtrate protein-10 (CFP-10) antibodies showed mild, moderate, and intense positive reactions in type II and III, type I, and type IV granulomatous lesions, respectively. Molecular detection by PCR revealed Mycobacterium tuberculosis (12 carnivores, 02 non-human primates and 01 pachyderm), M. bovis (02 cervids and 01 bovid) and M. orygis (02 cervids and 01 bovid). Cultural isolation confirmed M. tuberculosis in 03 carnivores and M. orygis in 02 cervids and 01 bovid. Our findings imply that TB is quite prevalent in the wildlife of India and there are considerable differences in the histomorphological lesions induced by distinct Mycobacterium species in different wild animals. The circulation of TB organisms in wild animals warrants a strict surveillance programme to identify the carrier status of these animals so that effective TB control strategies can be formulated to prevent spillover and spillback incidences at the human-livestock-wildlife interface.
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Affiliation(s)
- Megha Sharma
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India
| | - M Karikalan
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India.
| | - P Dandapat
- ICAR-Indian Veterinary Research Institute, Eastern Regional Station, Kolkata (WB), India
| | - M Asok Kumar
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India
| | - V Beena
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India
| | - S Chandra Mohan
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India
| | - S Ilayaraja
- Deputy Director, Agra Bear Rescue Centre, Wildlife SOS, Keetham, Agra, Uttar Pradesh, India
| | - Arvind Mathur
- Senior Veterinary Officer, Nahargarh Biological Park, Rajasthan, India
| | - Abhijit Bhawal
- Veterinary Officer, National Zoological Park, New Delhi, India
| | - A M Pawde
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India
| | - A K Sharma
- ICAR- Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122, Uttar Pradesh, India
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21
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Rosa F, Sharma AK, Gurung M, Casero D, Matazel K, Bode L, Simecka C, Elolimy AA, Tripp P, Randolph C, Hand TW, Williams KD, LeRoith T, Yeruva L. Human Milk Oligosaccharides Impact Cellular and Inflammatory Gene Expression and Immune Response. Front Immunol 2022; 13:907529. [PMID: 35844612 PMCID: PMC9278088 DOI: 10.3389/fimmu.2022.907529] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 05/25/2022] [Indexed: 11/13/2022] Open
Abstract
Human milk harbors complex carbohydrates, including human milk oligosaccharides (HMOs), the third most abundant component after lactose and lipids. HMOs have been shown to impact intestinal microbiota, modulate the intestinal immune response, and prevent pathogenic bacterial binding by serving as decoy receptors. However, the direct effect of HMOs on intestinal function and immunity remains to be elucidated. To address this knowledge gap, 21-day-old germ-free mice (C57BI/6) were orally gavaged with 15 mg/day of pooled HMOs for 7 or 14 days and euthanized at day 28 or 35. A set of mice was maintained until day 50 to determine the persistent effects of HMOs. Control groups were maintained in the isolators for 28, 35, or 50 days of age. At the respective endpoints, intestinal tissues were subjected to histomorphometric and transcriptomic analyses, while the spleen and mesenteric lymph nodes (MLNs) were subjected to flow cytometric analysis. The small intestine (SI) crypt was reduced after HMO treatment relative to control at days 28 and 35, while the SI villus height and large intestine (LI) gland depth were decreased in the HMO-treated mice relative to the control at day 35. We report significant HMO-induced and location-specific gene expression changes in host intestinal tissues. HMO treatment significantly upregulated genes involved in extracellular matrix, protein ubiquitination, nuclear transport, and mononuclear cell differentiation. CD4+ T cells were increased in both MLNs and the spleen, while CD8+ T cells were increased in the spleen at day 50 in the HMO group in comparison to controls. In MLNs, plasma cells were increased in HMO group at days 28 and 35, while in the spleen, only at day 28 relative to controls. Macrophages/monocytes and neutrophils were lower in the spleen of the HMO group at days 28, 35, and 50, while in MLNs, only neutrophils were lower at day 50 in the 14-day HMO group. In addition, diphtheria toxoid and tetanus toxoid antibody-secreting cells were higher in HMO-supplemented group compared to controls. Our data suggest that HMOs have a direct effect on gastrointestinal tract metabolism and the immune system even in the absence of host microbiota.
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Affiliation(s)
- Fernanda Rosa
- Arkansas Children’s Nutrition Center, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Little Rock, AR, United States
- School of Veterinary Medicine, Texas Tech University, Amarillo, TX, United States
| | - Ashok K. Sharma
- Inflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai, Los Angeles, CA, United States
| | - Manoj Gurung
- Arkansas Children’s Nutrition Center, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Little Rock, AR, United States
| | - David Casero
- Inflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai, Los Angeles, CA, United States
| | - Katelin Matazel
- Arkansas Children’s Nutrition Center, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Little Rock, AR, United States
| | - Lars Bode
- Larsson-Rosenquist Foundation Mother-Milk-Infant Center of Research Excellence, University of California San Diego, La Jolla, CA, United States
- Department of Pediatrics, University of California San Diego, La Jolla, CA, United States
| | - Christy Simecka
- Division of Laboratory Animal Medicine, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Ahmed A. Elolimy
- Arkansas Children’s Nutrition Center, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Little Rock, AR, United States
- Animal Production Department, National Research Centre, Giza, Egypt
| | - Patricia Tripp
- Arkansas Children’s Nutrition Center, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Little Rock, AR, United States
| | - Christopher Randolph
- Center for Translational Pediatric Research, Arkansas Children’s Research Institute, Little Rock, AR, United States
| | - Timothy W. Hand
- University of Pittsburgh School of Medicine, R.K. Mellon Foundation Institute for Pediatric Research, University of Pittsburgh Medical Center (UPMC) Children’s Hospital of Pittsburgh, Pittsburgh, PA, United States
| | - Keith D. Williams
- Department of Biostatistics, University of Arkansas for Medical Sciences, Little Rock, AR, United States
| | - Tanya LeRoith
- Department of Biomedical Sciences & Pathobiology, Virginia Tech, Blacksburg, VA, United States
| | - Laxmi Yeruva
- Arkansas Children’s Nutrition Center, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Little Rock, AR, United States
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22
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Sharma AK, Conover SP, Sirkar KK. Plasma Polymerized Coatings on Hollow Fiber Membranes-Applications and Their Aging Characteristics in Different Media. Membranes 2022; 12:membranes12070656. [PMID: 35877859 PMCID: PMC9320213 DOI: 10.3390/membranes12070656] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 06/15/2022] [Accepted: 06/23/2022] [Indexed: 02/04/2023]
Abstract
In the past 30 years, plasma polymerization has emerged as a versatile technique for depositing ultrathin nanocoating on a variety of substrates for applications that range from providing lubricity to the substrate, protection from harsh environments, promoting adhesion, surface modification to applications of coating in ultrafiltration and gas separation membranes. Applications in the field of volatile organic compound (VOC) recovery and membrane distillation have also gained importance in recent years. Most of these applications use silicone and fluorosilicone-based plasma polymers that provide versatility, good separation characteristics, and long-term stability to the membrane. However, plasma polymers are known to age with time. The current study focuses on the aging behavior of silicone and fluorosilicone plasma polymers in different environments that include air, ionized air, heat, aqueous solutions of inorganic chemicals, as well as harsh solvents such as hexane, dichloromethane (DCM), and toluene. Membrane gas permeance and gas selectivity were used to quantitatively measure the aging behavior of the coatings on gas separation membranes, while water and VOC flux were used to measure the effect of aging for membranes designed for membrane distillation and VOC separation. It was found that while all plasma polymers of this study showed changes in membrane gas permeance on exposure to air, they fundamentally retained their membrane separation characteristics in all the studied environments. Significant changes in gas permeability characteristics were observed on exposure of the membranes to organic solvents like dichloromethane, 2-propanol, hexane, and toluene, which are attributed to dimensional changes in the hollow fiber substrate rather than changes in plasma polymer characteristics. Ionized air was also found to have a significant effect on the gas permeability characteristic of the membranes, reducing the gas permeance by as much as 50% in some cases. This is attributed to accelerated oxidation and crosslinking of the polymer in ionized air. XPS studies showed an increase in the oxygen content of the polymer on aging. Differences were found in the aging behavior of polymer coatings made from different monomers with long-chain monomers such as hexamethyltrisiloxane offering more stable coatings. The cross-link density of the polymer also influenced the aging behavior, with the more cross-linked polymer showing a lesser influence on aging in a chemical environment. No significant effect of aging was found on applications of these polymer coatings in the field of membrane distillation, pervaporation, and VOC removal, and a stable performance was observed over a long period of time. It was also noted that the selection of co-monomers played a significant role in membrane distillation, with polymers forming fluoro co-monomers giving better results. The current study also demonstrated the usefulness of plasma polymers in controlling the pore size of microporous membranes that can find useful applications in bio-filtration and VOC recovery.
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Affiliation(s)
- Ashok K. Sharma
- Applied Membrane Technology, 11558 Encore Circle, Minnetonka, MN 55343, USA;
- Correspondence:
| | - Stephen P. Conover
- Applied Membrane Technology, 11558 Encore Circle, Minnetonka, MN 55343, USA;
| | - Kamalesh K. Sirkar
- Otto York Department of Chemical and Materials Engineering, New Jersey Institute of Technology, University Heights, Newark, NJ 07102, USA;
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23
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Bind S, Bind S, Sharma AK, Chaturvedi P. Epigenetic Modification: A Key Tool for Secondary Metabolite Production in Microorganisms. Front Microbiol 2022; 13:784109. [PMID: 35495688 PMCID: PMC9043899 DOI: 10.3389/fmicb.2022.784109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Accepted: 01/19/2022] [Indexed: 11/13/2022] Open
Abstract
Microorganisms are stupendous source of secondary metabolites, having significant pharmaceutical and industrial importance. Genome mining has led to the detection of several cryptic metabolic pathways in the natural producer of secondary metabolites (SMs) such as actinobacteria and fungi. Production of these bioactive compounds in considerable amount is, however, somewhat challenging. This led to the search of using epigenetics as a key mechanism to alter the expression of genes that encode the SMs toward higher production in microorganisms. Epigenetics is defined as any heritable change without involving the changes in the underlying DNA sequences. Epigenetic modifications include chromatin remodeling by histone posttranslational modifications, DNA methylation, and RNA interference. Biosynthetic gene cluster for SMs remains in heterochromatin state in which the transcription of constitutive gene is regulated by epigenetic modification. Therefore, small-molecule epigenetic modifiers, which promote changes in the structure of chromatin, could control the expression of silent genes and may be rationally employed for discovery of novel bioactive compounds. This review article focuses on the types of epigenetic modifications and their impact on gene expression for enhancement of SM production in microorganisms.
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Affiliation(s)
- Sudha Bind
- Department of Biological Sciences, CBSH, G. B. Pant University of Agriculture & Technology, Pantnagar, India
| | - Sandhya Bind
- Department of Biological Sciences, CBSH, G. B. Pant University of Agriculture & Technology, Pantnagar, India
| | - A K Sharma
- Department of Biological Sciences, CBSH, G. B. Pant University of Agriculture & Technology, Pantnagar, India
| | - Preeti Chaturvedi
- Department of Biological Sciences, CBSH, G. B. Pant University of Agriculture & Technology, Pantnagar, India
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24
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Saxena R, Prasoodanan P K V, Gupta SV, Gupta S, Waiker P, Samaiya A, Sharma AK, Sharma VK. Assessing the Effect of Smokeless Tobacco Consumption on Oral Microbiome in Healthy and Oral Cancer Patients. Front Cell Infect Microbiol 2022; 12:841465. [PMID: 35433507 PMCID: PMC9009303 DOI: 10.3389/fcimb.2022.841465] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 03/02/2022] [Indexed: 01/19/2023] Open
Abstract
Oral cancer is a globally widespread cancer that features among the three most prevalent cancers in India. The risk of oral cancer is elevated by factors such as tobacco consumption, betel-quid chewing, excessive alcohol consumption, unhygienic oral condition, sustained viral infections, and also due to dysbiosis in microbiome composition of the oral cavity. Here, we performed an oral microbiome study of healthy and oral cancer patients to decipher the microbial dysbiosis due to the consumption of smokeless-tobacco-based products and also revealed the tobacco-associated microbiome. The analysis of 196 oral microbiome samples from three different oral sites of 32 healthy and 34 oral squamous cell carcinoma (OSCC) patients indicated health status, site of sampling, and smokeless tobacco consumption as significant covariates associated with oral microbiome composition. Significant similarity in oral microbiome composition of smokeless-tobacco-consuming healthy samples and OSCC samples inferred the possible role of smokeless tobacco consumption in increasing inflammation-associated species in oral microbiome. Significantly higher abundance of Streptococcus was found to adequately discriminate smokeless-tobacco-non-consuming healthy samples from smokeless-tobacco-consuming healthy samples and contralateral healthy site of OSCC samples from the tumor site of OSCC samples. Comparative analysis of oral microbiome from another OSCC cohort also confirmed Streptococcus as a potential marker for healthy oral microbiome. Gram-negative microbial genera such as Prevotella, Capnocytophaga, and Fusobacterium were found to be differentially abundant in OSCC-associated microbiomes and can be considered as potential microbiome marker genera for oral cancer. Association with lipopolysaccharide (LPS) biosynthesis pathway further confirms the differential abundance of Gram-negative marker genera in OSCC microbiomes.
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Affiliation(s)
- Rituja Saxena
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Vishnu Prasoodanan P K
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Sonia Vidushi Gupta
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Sudheer Gupta
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Prashant Waiker
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Atul Samaiya
- Department of Surgical Oncology, Bansal Hospital, Bhopal, India
| | - Ashok K. Sharma
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
- Department of Gastroenterology, Inflammatory Bowel & Immunology Research Institute, Cedars Sinai Medical Center, Los Angeles, CA, United States
| | - Vineet K. Sharma
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
- *Correspondence: Vineet K. Sharma,
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25
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Omontese BO, Sharma AK, Davison S, Jacobson E, DiConstanzo A, Webb MJ, Gomez A. Microbiome network traits in the rumen predict average daily gain in beef cattle under different backgrounding systems. Anim Microbiome 2022; 4:25. [PMID: 35346381 PMCID: PMC8961956 DOI: 10.1186/s42523-022-00175-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Accepted: 03/20/2022] [Indexed: 02/01/2023] Open
Abstract
Background Backgrounding (BKG), the stage between weaning and finishing, significantly impacts feedlot performance in beef cattle; however, the contributions of the rumen microbiome to this growth stage remain unexplored. A longitudinal study was designed to assess how BKG affects rumen bacterial communities and average daily gain (ADG) in beef cattle. At weaning, 38 calves were randomly assigned to three BKG systems for 55 days (d): a high roughage diet within a dry lot (DL, n = 13); annual cover crop within a strip plot (CC, n = 13); and perennial pasture vegetation within rotational paddocks (PP, n = 12), as before weaning. After BKG, all calves were placed in a feedlot for 142 d and finished with a high energy ration. Calves were weighed periodically from weaning to finishing to determine ADG. Rumen bacterial communities were profiled by collecting fluid samples via oral probe and sequencing the V4 region of the 16S rRNA bacterial gene, at weaning, during BKG and finishing. Results Rumen bacterial communities diverged drastically among calves once they were placed in each BKG system, including sharp decreases in alpha diversity for CC and DL calves only (P < 0.001). During BKG, DL calves showed a substantial increase of Proteobacteria (Succinivibrionaceae family) (P < 0.001), which also corresponded with greater ADG (P < 0.05). At the finishing stage, Proteobacteria bloomed for all calves, with no previous alpha or beta diversity differences being retained between groups. However, at finishing, PP calves showed a compensatory ADG, particularly greater than that in calves coming from DL BKG (P = 0.02). Microbiome network traits such as lower average shortest path length, and increased neighbor connectivity, degree, number and strength of bacterial interactions between rumen bacteria better predicted ADG during BKG and finishing than variation in specific taxonomic profiles. Conclusions Bacterial co-abundance interactions, as measured by network theory approaches, better predicted growth performance in beef cattle during BKG and finishing, than the abundance of specific taxa. These findings underscore the importance of early post weaning stages as potential targets for feeding interventions that can enhance metabolic interactions between rumen bacteria, to increase productive performance in beef cattle. Supplementary Information The online version contains supplementary material available at 10.1186/s42523-022-00175-y.
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Affiliation(s)
- Bobwealth O Omontese
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA.,Department of Food and Animal Sciences, Alabama A&M University, Normal, AL, 35762, USA
| | - Ashok K Sharma
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Samuel Davison
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Emily Jacobson
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Alfredo DiConstanzo
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA
| | - Megan J Webb
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA.,Community Engagement and Partnerships, Eastern West Virginia Community and Technical College, Moorefield, WV, 26836, USA
| | - Andres Gomez
- Department of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA.
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26
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Sharma AK, Davison S, Pafco B, Clayton JB, Rothman JM, McLennan MR, Cibot M, Fuh T, Vodicka R, Robinson CJ, Petrzelkova K, Gomez A. The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors. NPJ Biofilms Microbiomes 2022; 8:12. [PMID: 35301322 PMCID: PMC8930997 DOI: 10.1038/s41522-022-00274-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 01/31/2022] [Indexed: 11/29/2022] Open
Abstract
The gut microbiome of primates is known to be influenced by both host genetic background and subsistence strategy. However, these inferences have been made mainly based on adaptations in bacterial composition - the bacteriome and have commonly overlooked the fungal fraction - the mycobiome. To further understand the factors that shape the gut mycobiome of primates and mycobiome-bacteriome interactions, we sequenced 16 S rRNA and ITS2 markers in fecal samples of four different nonhuman primate species and three human groups under different subsistence patterns (n = 149). The results show that gut mycobiome composition in primates is still largely unknown but highly plastic and weakly structured by primate phylogeny, compared with the bacteriome. We find significant gut mycobiome overlap between captive apes and human populations living under industrialized subsistence contexts; this is in contrast with contemporary hunter-gatherers and agriculturalists, who share more mycobiome traits with diverse wild-ranging nonhuman primates. In addition, mycobiome-bacteriome interactions were specific to each population, revealing that individual, lifestyle and intrinsic ecological factors affect structural correspondence, number, and kind of interactions between gut bacteria and fungi in primates. Our findings indicate a dominant effect of ecological niche, environmental factors, and diet over the phylogenetic background of the host, in shaping gut mycobiome composition and mycobiome-bacteriome interactions in primates.
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Affiliation(s)
- Ashok K Sharma
- Department of Animal Science, University of Minnesota, St. Paul, MN, USA.,Department of Gastroenterology, Inflammatory Bowel & Immunology Research Institute, Cedars Sinai Medical Center, Los Angeles, CA, USA
| | - Sam Davison
- Department of Animal Science, University of Minnesota, St. Paul, MN, USA
| | - Barbora Pafco
- Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic
| | - Jonathan B Clayton
- Department of Biology, University of Nebraska at Omaha, Omaha, NE, USA.,Callitrichid Research Center (CRC, Marmoset Colony) at the University of Nebraska at Omaha, Omaha, NE, USA.,Department of Food Science and Technology, University of Nebraska-Lincoln, Lincoln, NE, USA.,Primate Microbiome Project, University of Nebraska-Lincoln, Lincoln, NE, USA
| | - Jessica M Rothman
- Department of Anthropology, Hunter College of the City University of New York, 695 Park Avenue, New York, NY, USA.,New York Consortium in Evolutionary Primatology, New York, NY, USA
| | - Matthew R McLennan
- Department of Social Sciences, Faculty of Humanities and Social Sciences, Oxford Brookes University, Oxford, UK.,Bulindi Chimpanzee & Community Project, Hoima, Uganda
| | - Marie Cibot
- Department of Social Sciences, Faculty of Humanities and Social Sciences, Oxford Brookes University, Oxford, UK.,Bulindi Chimpanzee & Community Project, Hoima, Uganda.,Anicoon Vétérinaires, Ploemeur, France
| | - Terence Fuh
- WWF Central African Republic, Bayanga, Central African Republic
| | | | | | - Klara Petrzelkova
- Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.,Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Ceske Budejovice, Brno, Czech Republic
| | - Andres Gomez
- Department of Animal Science, University of Minnesota, St. Paul, MN, USA. .,Primate Microbiome Project, University of Nebraska-Lincoln, Lincoln, NE, USA. .,Department of Food Science and Nutrition, University of Minnesota, St. Paul, MN, USA.
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27
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Chandramohan S, Mallord JW, Mathesh K, Sharma AK, Mahendran K, Kesavan M, Gupta R, Chutia K, Pawde A, Prakash NV, Ravichandran P, Saikia D, Shringarpure R, Timung A, Galligan TH, Green RE, Prakash VM. Experimental safety testing shows that the NSAID tolfenamic acid is not toxic to Gyps vultures in India at concentrations likely to be encountered in cattle carcasses. Sci Total Environ 2022; 809:152088. [PMID: 34861305 DOI: 10.1016/j.scitotenv.2021.152088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Revised: 11/14/2021] [Accepted: 11/26/2021] [Indexed: 06/13/2023]
Abstract
Population declines of Gyps vultures across the Indian subcontinent were caused by unintentional poisoning by the non-steroidal anti-inflammatory drug (NSAID) diclofenac. Subsequently, a number of other NSAIDs have been identified as toxic to vultures, while one, meloxicam, is safe at concentrations likely to be encountered by vultures in the wild. Other vulture-safe drugs need to be identified to reduce the use of those toxic to vultures. We report on safety-testing experiments on the NSAID tolfenamic acid on captive vultures of three Gyps species, all of which are susceptible to diclofenac poisoning. Firstly, we estimated the maximum level of exposure (MLE) of wild vultures and gave this dose to 40 Near Threatened Himalayan Griffons G. himalayensis by oral gavage, with 15 control birds dosed with benzyl alcohol (the carrier solution for tolfenamic acid). Two birds given tolfenamic acid died with elevated uric acid levels and severe visceral gout, while the remainder showed no adverse clinical or biochemical signs. Secondly, four G. himalayensis were fed tissues from water buffaloes which had been treated with double the recommended veterinary dose of tolfenamic acid prior to death and compared to two birds fed uncontaminated tissue; none suffered any clinical effects. Finally, two captive Critically Endangered vultures, one G. bengalensis and one G. indicus, were given the MLE dose by gavage and compared to two control birds; again, none suffered any clinical effects. The death of two G. himalayensis may have been an anomaly due to i) the high dose level used and ii) the high ambient temperatures at the time of the experiment. Tolfenamic acid is likely to be safe to Gyps vultures at concentrations encountered by wild birds and could therefore be promoted as a safe alternative to toxic NSAIDs. It is manufactured in the region, and is increasingly being used to treat livestock.
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Affiliation(s)
- S Chandramohan
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - John W Mallord
- RSPB Centre for Conservation Science, The Lodge, Sandy, Bedfordshire SG19 2DL, UK.
| | - Karikalan Mathesh
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - A K Sharma
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - K Mahendran
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Manickam Kesavan
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Reena Gupta
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Krishna Chutia
- Bombay Natural History Society, Hornbill House, Mumbai 400023, India
| | - Abhijit Pawde
- Centre for Wildlife, Indian Veterinary Research Institute, Bareilly, Uttar Pradesh 243122, India
| | - Nikita V Prakash
- Bombay Natural History Society, Hornbill House, Mumbai 400023, India
| | - P Ravichandran
- Bombay Natural History Society, Hornbill House, Mumbai 400023, India
| | - Debasish Saikia
- Bombay Natural History Society, Hornbill House, Mumbai 400023, India
| | | | - Avinash Timung
- Bombay Natural History Society, Hornbill House, Mumbai 400023, India
| | - Toby H Galligan
- RSPB Centre for Conservation Science, The Lodge, Sandy, Bedfordshire SG19 2DL, UK
| | - Rhys E Green
- RSPB Centre for Conservation Science, The Lodge, Sandy, Bedfordshire SG19 2DL, UK; Conservation Science Group, Department of Zoology, University of Cambridge, Downing Street, CB2 3EJ, UK
| | - Vibhu M Prakash
- Bombay Natural History Society, Hornbill House, Mumbai 400023, India
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Dadarwal A, Roy S, Sharma AK, Sharma KK. Optical coherence tomography versus angiography to guide percutaneous intervention: a real-world single center propensity-matched analysis. Eur Heart J 2022. [DOI: 10.1093/eurheartj/ehab849.129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Funding Acknowledgements
Type of funding sources: None.
Background
Optical coherence tomography (OCT) with its superior resolution has several benefits over coronary angiography (CA) to guide percutaneous coronary intervention (PCI). Despite the benefits of OCT in comparison with angiography, it is not widely used in developing countries like India data is limited in India specifically in all comer population to meet unmet need.
Objective
Here we aim to determine the clinical efficacy and safety outcomes of OCT versus CA alone in guiding PCI in all-comer patients.
Methods
This was a retrospective study which included 434 all comer patients which were propensity matched. These patients underwent PCI at our center between December 2018 and June 2020. The primary endpoint was MACE, a composite of cardiovascular death, repeat revascularization, stent thrombosis, recurrent ischemia and target vessel myocardial infarction (TV-MI) at 6 months. Secondary endpoint was target lesion failure (TLF), composite of stent thrombosis and in-stent restenosis. Safety endpoints were post-PCI s. creatinine and hospital stay and other outcome includes post PCI rise in CK-MB.
Results
A total of 217 patients were included in each group: the OCT group and conventional angiography guided PCI (angio group) after propensity matching. Compared to angio group, patients presenting with unstable angina, NSTEMI were significantly higher in the OCT group (55.7% vs 43.3%, p = 0.0095; 17.5% vs 10%, p = 0.02, respectively) while patients with STEMI were significantly low in the OCT (23.5% vs 41.5%, p = 0.00005). Number of balloons, maximum balloon size and left main interventions and contrast volume were more in OCT group than angio group (4.21 ± 1.67 vs 3.86 ± 1.76, P= 0.0034; 3.77 ± 0.63 mm vs 3.51 ± 0.52 mm,P < 0.0001; 24.52% vs 13.36 %,P = 0.003 and 202.53 ± 73.15 ml vs 161.91 ± 69.23 ml, P< 0.0001 respectively). The incidence of MACE at 6 months was numerically lower in the OCT group vs angio group but the difference was not statistically significant (15 [6.9%] vs 21 [9.7%]; p = 0.2964). No cases of TV-MI, TLF (stent thrombosis or in-stent restenosis) is observed in both the groups. Post procedure rise in CKMB was more in Angio group in comparison to OCT group (6.16 ± 31.28 ng/ml vs 39.5 ± 108.71 ng/ml, p < 0.001). Optimal stent expansion (>80%) was seen in 71.5% patients in post OCT-guided PCI. In OCT guided PCI group, OCT identified stent underexpansion in 28.5%, stent malapposition in 3.7%, stent edge dissection in 4.1%, and tissue prolapse in 10% of the patients.
Conclusion
In this large retrospective study, OCT guided PCI is feasible and OCT-guided PCI has tendency to improve clinical outcomes at six months follow up compared to conventional angiography guided PCI in all comer patients. Abstract Figure. central illustration Abstract Figure. Identification of PCI complications
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Affiliation(s)
| | - S Roy
- Fortis Escorts Hospital, Jaipur, India
| | | | - K K Sharma
- Lal Bahadur Shastri College Of Pharmacy, Pharmacology, Jaipur, India
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Saxena R, Prasoodanan P K V, Gupta SV, Gupta S, Waiker P, Samaiya A, Sharma AK, Sharma VK. Assessing the Effect of Smokeless Tobacco Consumption on Oral Microbiome in Healthy and Oral Cancer Patients. Front Cell Infect Microbiol 2022. [PMID: 35433507 DOI: 10.3389/fcimb.2022.841465/full] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/21/2023] Open
Abstract
Oral cancer is a globally widespread cancer that features among the three most prevalent cancers in India. The risk of oral cancer is elevated by factors such as tobacco consumption, betel-quid chewing, excessive alcohol consumption, unhygienic oral condition, sustained viral infections, and also due to dysbiosis in microbiome composition of the oral cavity. Here, we performed an oral microbiome study of healthy and oral cancer patients to decipher the microbial dysbiosis due to the consumption of smokeless-tobacco-based products and also revealed the tobacco-associated microbiome. The analysis of 196 oral microbiome samples from three different oral sites of 32 healthy and 34 oral squamous cell carcinoma (OSCC) patients indicated health status, site of sampling, and smokeless tobacco consumption as significant covariates associated with oral microbiome composition. Significant similarity in oral microbiome composition of smokeless-tobacco-consuming healthy samples and OSCC samples inferred the possible role of smokeless tobacco consumption in increasing inflammation-associated species in oral microbiome. Significantly higher abundance of Streptococcus was found to adequately discriminate smokeless-tobacco-non-consuming healthy samples from smokeless-tobacco-consuming healthy samples and contralateral healthy site of OSCC samples from the tumor site of OSCC samples. Comparative analysis of oral microbiome from another OSCC cohort also confirmed Streptococcus as a potential marker for healthy oral microbiome. Gram-negative microbial genera such as Prevotella, Capnocytophaga, and Fusobacterium were found to be differentially abundant in OSCC-associated microbiomes and can be considered as potential microbiome marker genera for oral cancer. Association with lipopolysaccharide (LPS) biosynthesis pathway further confirms the differential abundance of Gram-negative marker genera in OSCC microbiomes.
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Affiliation(s)
- Rituja Saxena
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Vishnu Prasoodanan P K
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Sonia Vidushi Gupta
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Sudheer Gupta
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Prashant Waiker
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
| | - Atul Samaiya
- Department of Surgical Oncology, Bansal Hospital, Bhopal, India
| | - Ashok K Sharma
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
- Department of Gastroenterology, Inflammatory Bowel & Immunology Research Institute, Cedars Sinai Medical Center, Los Angeles, CA, United States
| | - Vineet K Sharma
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
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Gautam R, Rajoura OP, Sharma AK, Rajpal, Bhatia MS. Socio-demographic features and quality of life post burn injury. J Family Med Prim Care 2022; 11:1032-1035. [PMID: 35495786 PMCID: PMC9051735 DOI: 10.4103/jfmpc.jfmpc_1172_21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Revised: 10/14/2021] [Accepted: 10/20/2021] [Indexed: 11/06/2022] Open
Abstract
Introduction: Burn injury is a highly devastating injury accounting for the major cause of disability-adjusted life years (DALYs) lost mostly in developing countries. Physical trauma, body disfigurement, the social stigma associated with injury completely shatter an individual’s life. Aim: To study the quality of life among burn injury patients. Methodology: A cross-sectional hospital-based descriptive study was done on 150 burn injury patients. During the initial recruitment from Burns and Plastic Surgery Ward, socio-demographic profile and burn incident-related data were collected, whereas the WHO QoL-BREF tool was applied after 3 months of discharge during a follow-up visit in the outpatient department of Burns and Plastic Surgery to assess the quality of life among subjects. Data were compiled in MS Excel and statistical analysis was done using SPSS 20 version. Results: The study revealed poor quality of life among four domains of QoL; it was most inferior in the psychological domain followed by the physical health domain, environment domain, and social relationship domain. Conclusion: Advancement in the medical field has improved the survival rate in victims although the patients recover from the acute painful phase of physical trauma. However, the psychological and social impacts of injury remain unaddressed leading to a poor QoL. There is a need for an integrated approach for prevention and enhancement of the quality of care for the victims in all four domains of life. More emphasis is needed on rehabilitative care for long-term improvement in the QoL of the affected person.
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Rani S, Sharma AK, Kasu R, Gupta U. Polymeric Nanoparticles: A Holistic Approach to Combat Tuberculosis. Crit Rev Ther Drug Carrier Syst 2022; 39:83-115. [DOI: 10.1615/critrevtherdrugcarriersyst.2022039981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Thakur A, Dixit AK, Sharma AK, Kumar S, Sendhil R, Singh .AK. Adoption of food safety practices in the informal milk processing units of Haryana, India – A value chain approach. IJDS 2021. [DOI: 10.33785/ijds.2021.v74i06.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Yadav A, Bagotia N, Sharma AK, Kumar S. Simultaneous adsorptive removal of conventional and emerging contaminants in multi-component systems for wastewater remediation: A critical review. Sci Total Environ 2021; 799:149500. [PMID: 34388884 DOI: 10.1016/j.scitotenv.2021.149500] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Revised: 08/02/2021] [Accepted: 08/02/2021] [Indexed: 06/13/2023]
Abstract
The rapid growth of population and industrialization results in pollution of freshwater sources which leads to the water stress conditions on the world in future. Adsorption is a low cost and popular technique for the removal of contaminants from water bodies. Most of the reports till date are on removal of a single component from aqueous solutions using this technique, but the real-world effluent contains multiple contaminants such as dyes, heavy metals, pesticides, antibiotics and many more. Therefore, a study on simultaneous removal of contaminants is highly needed to obtain a suitable adsorbent that can be used commercially. This critical review provides a detailed study on the removal of contaminants in the presence of other contaminant/s i.e., from a multi-component system (MCS). The different possible interaction mechanisms in MCS like synergism, antagonism and non-interaction are discussed. The MCS containing the mixture of conventional contaminants such as heavy metals and dyes, and other emerging contaminants such as antibiotics, organic contaminants, pesticides and personal care products are explained in depth. This review article will be helpful for researchers working in the field of simultaneous removal of contaminants from MCSs for wastewater remediation.
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Affiliation(s)
- Aruna Yadav
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana 127021, India
| | - Nisha Bagotia
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana 127021, India
| | - Ashok K Sharma
- Department of Chemistry, Deenbandhu Chhotu Ram University of Science and Technology, Murthal, Sonepat, Haryana 131039, India
| | - Surender Kumar
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani, Haryana 127021, India.
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Prasoodanan P K V, Sharma AK, Mahajan S, Dhakan DB, Maji A, Scaria J, Sharma VK. Western and non-western gut microbiomes reveal new roles of Prevotella in carbohydrate metabolism and mouth-gut axis. NPJ Biofilms Microbiomes 2021; 7:77. [PMID: 34620880 PMCID: PMC8497558 DOI: 10.1038/s41522-021-00248-x] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2021] [Accepted: 09/09/2021] [Indexed: 01/22/2023] Open
Abstract
The abundance and diversity of host-associated Prevotella species have a profound impact on human health. To investigate the composition, diversity, and functional roles of Prevotella in the human gut, a population-wide analysis was carried out on 586 healthy samples from western and non-western populations including the largest Indian cohort comprising of 200 samples, and 189 Inflammatory Bowel Disease samples from western populations. A higher abundance and diversity of Prevotella copri species enriched in complex plant polysaccharides metabolizing enzymes, particularly pullulanase containing polysaccharide-utilization-loci (PUL), were found in Indian and non-western populations. A higher diversity of oral inflammations-associated Prevotella species and an enrichment of virulence factors and antibiotic resistance genes in the gut microbiome of western populations speculates an existence of a mouth-gut axis. The study revealed the landscape of Prevotella composition in the human gut microbiome and its impact on health in western and non-western populations.
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Affiliation(s)
- Vishnu Prasoodanan P K
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, Madhya Pradesh, 462066, India
| | - Ashok K Sharma
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, Madhya Pradesh, 462066, India
- Department of Animal Science, Department of Food Science and Nutrition, University of Minnesota, Saint Paul, MN, 55455, USA
| | - Shruti Mahajan
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, Madhya Pradesh, 462066, India
| | - Darshan B Dhakan
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, Madhya Pradesh, 462066, India
- Behaviour and Metabolism Laboratory, Champalimaud Research, Champalimaud Centre for the Unknown, Lisbon, 1400-038, Lisboa, Portugal
| | - Abhijit Maji
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, Madhya Pradesh, 462066, India
- Animal Disease Research & Diagnostic Laboratory, South Dakota State University, Brookings, SD, 57007, USA
| | - Joy Scaria
- Animal Disease Research & Diagnostic Laboratory, South Dakota State University, Brookings, SD, 57007, USA
| | - Vineet K Sharma
- MetaBioSys Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, Madhya Pradesh, 462066, India.
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Yadav A, Bagotia N, Sharma AK, Kumar S. Advances in decontamination of wastewater using biomass-basedcomposites: A critical review. Sci Total Environ 2021; 784:147108. [PMID: 33892326 DOI: 10.1016/j.scitotenv.2021.147108] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 04/07/2021] [Accepted: 04/08/2021] [Indexed: 06/12/2023]
Abstract
Contaminant removal from wastewater using natural biosorbents has been widely studied as a suitable and environmentally benign alternative for conventional techniques. Currently, researchers are working on various biomass-based composites for wastewater remediation to improve the performance of natural biosorbents. This review takes into focus a wide range of biomass-based composites like hydrogel composites, metal oxide composites, magnetic composites, polymer composites, carbon nanotubes (CNTs) and graphene composites, metal organic framework composites (MOFs) and clay composites for the removal of various contaminants from wastewater. It is evident from the literature survey that the composite fabrication involves the modification of morphological and textural features of the biomass which results in significant enhancement of adsorption capacity. Apart from this, regeneration of the used biomass-based composite is also studied in depth in order to overcome the problem of solid waste generation. This review would prove to be beneficial for researchers who are currently focusing on the development of cost-effective, easily available, recyclable biomass-based composites with enhanced adsorption capacities for wastewater treatment.
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Affiliation(s)
- Aruna Yadav
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani 127021, Haryana, India
| | - Nisha Bagotia
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani 127021, Haryana, India
| | - Ashok K Sharma
- Department of Chemistry, Deenbandhu Chhotu Ram University of Science and Technology, Murthal, Sonepat 131039, Haryana, India
| | - Surender Kumar
- Department of Chemistry, Chaudhary Bansi Lal University, Bhiwani 127021, Haryana, India.
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VinodhKumar OR, Karikalan M, Ilayaraja S, Sha AA, Singh BR, Sinha DK, Chandra Mohan S, Pruthvishree BS, Pawde AM, Sharma AK. Multi-drug resistant (MDR), extended spectrum beta-lactamase (ESBL) producing and carbapenem resistant Escherichia coli in rescued Sloth bears (Melursus ursinus), India. Vet Res Commun 2021; 45:163-170. [PMID: 34041662 DOI: 10.1007/s11259-021-09794-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Accepted: 04/23/2021] [Indexed: 11/28/2022]
Abstract
The study reports the multi-drug resistant (MDR), extended spectrum beta-lactamase (ESBL) producing and carbapenem resistant Escherichia coli (CRE) isolated from rescued sloth bear (Melursus ursinus), India. Non-duplicate faecal samples from 21 adult rescued sloth bears were collected at once during 2015-2016 and processed for isolation of E. coli and antibacterial susceptibility pattern. From 21 samples, 45 E. coli were isolated and on phenotypic screening, 23 were MDR, 17 were ESBL producers, and five were carbapenem-resistant (CR). Three E. coli isolates (6.67%, 3/45) showed no resistance, however 42 isolates (93.33%, 42/45) exhibited resistant to at least one antibiotics. The MDR isolates carried beta-lactamase, chloramphenicol, aminoglycosides, tetracycline, fluroquinolone, and sulphadimidine resistance genes. All the phenotypic ESBL producing isolates harbored blaCTX-M genes. On genotypic screening, three CRE (60.0%, 3/5) were positive for blaNDM carbapenemase gene and efflux pump-mediated carbapenem resistance was detected in two CRE isolates (40.0%, 2/5) which were negative for carbapenemase genes. The CRE isolates (n = 5) also co-harbored AMR genes like blaTEM-1, blaAmpC, qnrA, qnrB, qnrS, tetA, tetB and sulI. Virulence screening of the resistant isolates detected the presence of Stx1(n = 1), Stx2 (n = 3), eaeA (n = 4) and hlyA (n = 3) genes. Plasmid incompatibility (Inc) typing revealed that two isolates harboured blaNDM-5 gene on Incl1 and one isolate on IncF plasmid. Apart from the NDM gene, the plasmids also carried tetracycline, beta-lactamase and quinolone resistance genes. The plasmid multilocus sequence typing (pMLST) of the E. coli Incl1 plasmid showed the Sequence Type (ST) 297. This appears to be the first report of MDR, ESBL producing and blaNDM-5 genes on Incl1 and IncF plasmids from rescued sloth bear.
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Affiliation(s)
- O R VinodhKumar
- Division of Epidemiology, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India.
| | - M Karikalan
- Centre for Wildlife, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - S Ilayaraja
- Agra Bear Rescue Centre, Wildlife SOS, Keetham, Agra, Uttar Pradesh, India
| | - Arun A Sha
- Research &Veterinary Operations, Bannerghatta Bear Rescue Centre, Wildlife SOS, Bengaluru, India
| | - B R Singh
- Division of Epidemiology, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - D K Sinha
- Division of Epidemiology, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - S Chandra Mohan
- Centre for Wildlife, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - B S Pruthvishree
- Division of Epidemiology, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - A M Pawde
- Centre for Wildlife, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - A K Sharma
- Centre for Wildlife, ICAR- Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
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Sharma AK, Gupta P, Sharma HR. Outcome of Trabeculectomy with Collagen Matrix Implant versus Mitomycin C in Primary Glaucoma: A Comparative Study. Int J Appl Basic Med Res 2021; 11:80-84. [PMID: 33912426 PMCID: PMC8061608 DOI: 10.4103/ijabmr.ijabmr_609_20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 11/02/2020] [Accepted: 01/08/2021] [Indexed: 11/19/2022] Open
Abstract
Background: Glaucoma is a serious vision-threatening condition appropriately called as the silent killer of sight. The effect of postoperative fibrosis on success of filtration surgeries requires modulation of the wound healing process. Aim: The aim of the study was to compare trabeculectomy augmented with collagen matrix implant with mitomycin C in primary glaucoma. Materials and Methods: This prospective, longitudinal, hospital-based, analytical, and interventional study was conducted on 36 eyes of 36 patients. Group 1 included 18 patients who underwent trabeculectomy combined with subconjunctival collagen matrix implant and Group 2 included 18 patients who underwent trabeculectomy augmented with intraoperative mitomycin C (0.04 mg/ml) for 2 min. Each patient underwent detailed ocular examination and comparison was drawn by recording intraocular pressure (IOP), bleb characteristics, and postoperative complications. Results: The cumulative success rates at the end of our study were similar in two groups, 94.44% in Group 1 and 88.89% in Group 2 (P = 1.000). The mean reduction in IOP at 24 weeks in Group 1 was 18.67 ± 7.59 mmHg and in Group 2 was 21.32 ± 5.84 mmHg. The reduction in IOP was similar between the two groups (P = 0.290). The mean fall in IOP was 56.46% in Group 1 and 64.70% in Group 2 at 24 weeks. Mean bleb score in Group 1 was 10.33 ± 1.23 and in Group 2 was 8.89 ± 1.41, and the difference was statistically significant (P = 0.002). Shallow anterior chamber, overfiltration, and hypotony were statistically higher in Group 2 than in Group 1 (P = 0.041, 0.041, and 0.046, respectively). Conclusion: Collagen matrix implant as an adjuvant to trabeculectomy is noble, safe, and effective option as compared to mitomycin C.
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Affiliation(s)
- Ashok K Sharma
- Department of Ophthalmology, Government Medical College, Jammu, Jammu and Kashmir, India
| | - Palak Gupta
- Department of Ophthalmology, Government Medical College, Jammu, Jammu and Kashmir, India
| | - Hans Raj Sharma
- Department of Ophthalmology, Government Medical College, Jammu, Jammu and Kashmir, India
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Affiliation(s)
- Priya Saharan
- Thin Film Laboratory, Department of Chemistry, Deenbandhu Chhotu Ram University of Science & Technology, Murthal, Haryana, India
| | - Vinit Kumar
- Central Instrumentation Laboratory, Deenbandhu Chhotu Ram University of Science & Technology, Murthal, Haryana, India
| | - Jyoti Mittal
- Department of Chemistry, Maulana Azad National Institute of Technology Bhopal, Bhopal, Madhya Pradesh, India
| | - Vishal Sharma
- Fullbright Climate Fellow, National Renewable Energy Laboratory, Golden, CO, USA
| | - Ashok K. Sharma
- Thin Film Laboratory, Department of Chemistry, Deenbandhu Chhotu Ram University of Science & Technology, Murthal, Haryana, India
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Sharma AK, Juelfs A, Colling C, Sharma S, Conover SP, Puranik AA, Chau J, Rodrigues L, Sirkar KK. Porous Hydrophobic-Hydrophilic Composite Hollow Fiber and Flat Membranes Prepared by Plasma Polymerization for Direct Contact Membrane Distillation. Membranes (Basel) 2021; 11:120. [PMID: 33567559 PMCID: PMC7916043 DOI: 10.3390/membranes11020120] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 02/01/2021] [Accepted: 02/04/2021] [Indexed: 11/30/2022]
Abstract
High water vapor flux at low brine temperatures without surface fouling is needed in membrane distillation-based desalination. Brine crossflow over surface-modified hydrophobic hollow fiber membranes (HFMs) yielded fouling-free operation with supersaturated solutions of scaling salts and their precipitates. Surface modification involved an ultrathin porous polyfluorosiloxane or polysiloxane coating deposited on the outside of porous polypropylene (PP) HFMs by plasma polymerization. The outside of hydrophilic MicroPES HFMs of polyethersulfone was also coated by an ultrathin coating of porous plasma-polymerized polyfluorosiloxane or polysiloxane rendering the surface hydrophobic. Direct contact membrane distillation-based desalination performances of these HFMs were determined and compared with porous PP-based HFMs. Salt concentrations of 1, 10, and 20 wt% were used. Leak rates were determined at low pressures. Surface and cross-sections of two kinds of coated HFMs were investigated by scanning electron microscopy. The HFMs based on water-wetted MicroPES substrate offered a very thin gas gap in the hydrophobic surface coating yielding a high flux of 26.4-27.6 kg/m2-h with 1 wt% feed brine at 70 °C. The fluxes of HFMs on porous PP substrates having a long vapor diffusion path were significantly lower. Coated HFM performances have been compared with flat hydrophilic membranes of polyvinylidene fluoride having a similar plasma-polymerized hydrophobic polyfluorosiloxane coating.
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Affiliation(s)
- Ashok K. Sharma
- Applied Membrane Technology Inc., 11558 Encore Circle, Minnetonka, MN 55343, USA; (A.K.S.); (A.J.); (C.C.); (S.S.)
| | - Adam Juelfs
- Applied Membrane Technology Inc., 11558 Encore Circle, Minnetonka, MN 55343, USA; (A.K.S.); (A.J.); (C.C.); (S.S.)
| | - Connor Colling
- Applied Membrane Technology Inc., 11558 Encore Circle, Minnetonka, MN 55343, USA; (A.K.S.); (A.J.); (C.C.); (S.S.)
| | - Saket Sharma
- Applied Membrane Technology Inc., 11558 Encore Circle, Minnetonka, MN 55343, USA; (A.K.S.); (A.J.); (C.C.); (S.S.)
| | - Stephen P. Conover
- Applied Membrane Technology Inc., 11558 Encore Circle, Minnetonka, MN 55343, USA; (A.K.S.); (A.J.); (C.C.); (S.S.)
| | - Aishwarya A. Puranik
- Otto York Department of Chemical and Materials Engineering, New Jersey Institute of Technology, University Heights, Newark, NJ 07102, USA; (A.A.P.); (J.C.); (L.R.)
| | - John Chau
- Otto York Department of Chemical and Materials Engineering, New Jersey Institute of Technology, University Heights, Newark, NJ 07102, USA; (A.A.P.); (J.C.); (L.R.)
| | - Lydia Rodrigues
- Otto York Department of Chemical and Materials Engineering, New Jersey Institute of Technology, University Heights, Newark, NJ 07102, USA; (A.A.P.); (J.C.); (L.R.)
| | - Kamalesh K. Sirkar
- Otto York Department of Chemical and Materials Engineering, New Jersey Institute of Technology, University Heights, Newark, NJ 07102, USA; (A.A.P.); (J.C.); (L.R.)
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Sharma AK. Dual trace inter-pulse interferometer for measurement of phase stability of ultra short laser pulse train. Rev Sci Instrum 2021; 92:023001. [PMID: 33648139 DOI: 10.1063/5.0033327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 01/31/2021] [Indexed: 06/12/2023]
Abstract
A dual trace intra-pulse and inter-pulse spatio-spectral interferometer has been set up to study the temporal stability of a ∼200 fs duration laser pulse train from a cw mode-locked laser oscillator. Simultaneous recording of twin interferograms helps identify the phase error in inter-pulse interferograms due to the diagnostic setup kept in a standard laboratory environment. Applicability of inter-pulse tilted pulse-front interferograms has been demonstrated to constitute an alternative inexpensive method for visual detection and estimation of phase slippage and pulse repetition frequency of an ultra short pulse train. The effect of pump beam intensity on the repetition rate of pulses due to accumulated intra-cavity non-linear phase shifts is also presented.
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Affiliation(s)
- A K Sharma
- Laser Technology Division, Raja Ramanna Centre for Advanced Technology, Indore 452013, India and Homi Bhabha National Institute, Mumbai 400094, India
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Sah S, Sharma AK, Singla SK, Singh MK, Chauhan MS, Manik RS, Palta P. Effects of treatment with a microRNA mimic or inhibitor on the developmental competence, quality, epigenetic status and gene expression of buffalo (Bubalus bubalis) somatic cell nuclear transfer embryos. Reprod Fertil Dev 2021; 32:508-521. [PMID: 31959280 DOI: 10.1071/rd19084] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 08/17/2019] [Indexed: 01/04/2023] Open
Abstract
Expression levels of 13 microRNAs (miRNAs) were compared between buffalo blastocysts produced by somatic cell nuclear transfer through hand-made cloning and IVF to improve cloning efficiency. Expression of miR-22, miR-145, miR-374a and miR-30c was higher, whereas that of miR-29b, miR-101, miR-302b, miR-34a, miR-21 and miR-25 was lower, in nuclear transferred (NT) than IVF embryos; the expression of miR-200b, miR-26a and miR-128 was similar between the two groups. Based on these, miR-145, which is involved in the regulation of pluripotency, was selected for further investigation of NT embryos. miR-145 expression was lowest at the 2-cell stage, increased through the 4-cell stage and was highest at the 8-cell or morula stage in a pattern that was similar between NT and IVF embryos. miR-145 expression was higher in NT than IVF embryos at all stages examined. Treatment of reconstructed embryos 1h after electrofusion with an inhibitor of miR-145 for 1h decreased the apoptotic index and increased the blastocyst rate, total cell number, ratio of cells in the inner cell mass to trophectoderm, global levels of acetylation of histone 3 at lysine 18 and expression of Krueppel-like factor 4 (KLF4), octamer-binding transcription factor 4 (OCT4) and SRY (sex determining region Y)-box 2 (SOX2) in blastocysts. Treatment with an miR-145 mimic had the opposite effects. In conclusion, treatment of NT embryos with an miR-145 inhibitor improves the developmental competence and quality, and increases histone acetylation and expression of pluripotency-related genes.
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Affiliation(s)
- S Sah
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India
| | - A K Sharma
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India
| | - S K Singla
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India
| | - M K Singh
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India
| | - M S Chauhan
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India
| | - R S Manik
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India
| | - P Palta
- Embryo Biotechnology Laboratory, Animal Biotechnology Centre, Indian Council of Agricultural Research-National Dairy Research Institute, GT Road, Karnal, Haryana, 132001 India; and Corresponding author.
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Kumar D, Gautam YP, Sharma AK, Kumar V, Tripathi AR, Kumar S, Kumar J, Saradhi IV, Kumar AV. Distribution of natural and artificial radioactivity concentration in soils of two districts (Ballia and Deoria) of Uttar Pradesh, India. Radiat Prot Environ 2021. [DOI: 10.4103/rpe.rpe_23_21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
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Omontese BO, Sharma AK, Langlie J, Armstrong J, DiCostanzo A, Webb MJ, Gomez A. PSVI-22 Rumen microbiome of beef cattle is modulated by backgrounding systems. J Anim Sci 2020. [DOI: 10.1093/jas/skaa054.383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Backgrounding (BKG) segment in beef production systems is characterized by utilization of different forages which affect growth performance and carcass characteristics. However, it is unclear how BKG systems impact rumen microbiome. We investigated rumen microbiome dynamics of beef calves under different BKG systems. At weaning, Angus and Angus x Simmental beef calves (n = 38) were stratified by age, weight, and sex in a completely randomized design into 1 of 3 BKG treatments for 55 d: 1) perennial pasture (PP; quackgrass, orchardgrass; smooth bromegrass, red clover, and alfalfa); 2) summer annual cover crop (CC; cereal oats, purple top turnips, hunter forage brassica, and graza forage radish); and 3) dry lot (DL; haylage, corn, and DDGS). After BKG, all calves were assigned to a high energy ration in a feedlot. Rumen sample was collected via esophageal tubing at weaning, BKG and feedlot. A total of 190 rumen fluid samples were used to sequence the hypervariable V4 region of the 16S rRNA bacterial gene on an Illumina MiSeq platform. The results showed that BKG systems largely influenced rumen bacterial communities. Specifically, microbiome composition and diversity were not different at weaning, diverged significantly during BKG (Shannon index, Bray Curtis distance metrics; P < 0.001) and homogenized during feedlot. During the BKG segment, the bacterial genera Agrobacterium, Coprococcus, and Ruminococcus were dominant in CC whereas Fibrobacteraceae and Mycoplasmataceae was most dominant in DL. Moreover, rumen microbiome patterns of CC and DL calves showed increased plasticity in early stages of development but not during feedlot with PP showing fewer changes over time. These results indicate that BKG systems significantly modulate the rumen microbiome of beef cattle and, underscore the importance of early developmental stages as potential targets for feeding interventions that can impact the animal microbiome to enhance animal performance.
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V R, Kumar N, Saxena S, Shrivastava S, Sharma AK, Kutty M, Singh K, Maiti SK, Mondal DB, Singh KP. Mesenchymal stem cell tailored bioengineered scaffolds derived from bubaline diaphragm and aortic matrices for reconstruction of abdominal wall defects. J Tissue Eng Regen Med 2020; 14:1763-1778. [PMID: 32931632 DOI: 10.1002/term.3132] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Revised: 09/01/2020] [Accepted: 09/01/2020] [Indexed: 12/11/2022]
Abstract
Bioengineered scaffolds derived from the decellularized extracellular matrix (ECM) obtained from discarded animal organs and tissues are attractive candidates for regenerative medicine applications. Tailoring these scaffolds with stem cells enhances their regeneration potential making them a suitable platform for regenerating damaged tissues. Thus, the study was designed to investigate the potential of mesenchymal stem cells tailored acellular bubaline diaphragm and aortic ECM for the repair of full-thickness abdominal wall defects in a rabbit model. Tissues obtained from bubaline diaphragm and aorta were decellularized and bioengineered by seeding with rabbit bone marrow derived mesenchymal stem cells (r-BMSC). Full-thickness abdominal wall defects of 3 cm × 4 cm size were created in a rabbit model and repaired using five different prostheses, namely, polypropylene sheet, nonseeded diaphragm ECM, nonseeded aorta ECM, r-BMSC bioengineered diaphragm ECM, and r-BMSC bioengineered aorta ECM. Results from the study revealed that biological scaffolds are superior in comparison to synthetic polymer mesh for regeneration in terms of collagen deposition, maturation, neovascularization, and lack of any significant (P > 0.05) adhesions with the abdominal viscera. Seeding with r-BMSC significantly increased (P < 0.05) the collagen deposition and biomechanical strength of the scaffolds. The bioengineered r-BMSC seeded acellular bubaline diaphragm showed even superior biomechanical strength as compared to synthetic polymer mesh. Tailoring of the scaffolds with the r-BMSC also resulted in significant reduction (P < 0.01) in antibody and cell mediated immune reactions to the xenogeneic scaffolds in rabbit model.
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Affiliation(s)
- Remya V
- Division of Surgery, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - Naveen Kumar
- Division of Surgery, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - Sonal Saxena
- Division of Veterinary Biotechnology, ICAR-ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - Sameer Shrivastava
- Division of Veterinary Biotechnology, ICAR-ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - A K Sharma
- Division of Surgery, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - Muhammed Kutty
- Division of Biochemistry, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - Kiranjeet Singh
- Division of Surgery, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - S K Maiti
- Division of Surgery, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - D B Mondal
- Division of Medicine, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
| | - K P Singh
- Division of Pathology, ICAR-Indian Veterinary Research Institute, Izatnagar, Uttar Pradesh, India
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Kumar V, Saharan P, Sharma AK, Kaushal I, Dhuan S. Silver embellished PANI/CNT nanocomposite for antimicrobial activity and sequestration of dye based on RSM modelling. Environ Technol 2020; 41:2991-3003. [PMID: 30855214 DOI: 10.1080/09593330.2019.1593512] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Accepted: 01/21/2019] [Indexed: 06/09/2023]
Abstract
Silver doped PANI/CNT (Ag-PANI/CNT) nanocomposite was synthesized and investigated as adsorbent for its possible application in the elimination of organic dye Brilliant Blue G (BBG). The morphological characteristics of Ag-PANI/CNT were studied using Fourier transform infrared, scanning electron microscopy, elemental mapping, transmission electron microscopy and X-ray diffraction. The response of operational parameters given as adsorbent dosage, concentration, pH and contact time for dye removal were investigated by using Response Surface Methodology (RSM). The results from RSM suggested that the efficiency of BBG elimination is 98.7 under the optimum conditions of experimental factors. The adsorption studies showed that the equilibrium data fitted well with Langmuir isotherm model compared to Freundlich. Finally, the antimicrobial activities of Ag-PANI/CNT were tested against bacterial strain Escherichia coli and Salmonella typhi and fungal strains Aspergillus niger.
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Affiliation(s)
- Vinit Kumar
- Thin Film Laboratory, Department of Materials Science & Nanotechnology, D.C.R. University of Science & Technology, Murthal, India
| | - Priya Saharan
- Thin Film Laboratory, Department of Materials Science & Nanotechnology, D.C.R. University of Science & Technology, Murthal, India
| | - Ashok K Sharma
- Thin Film Laboratory, Department of Materials Science & Nanotechnology, D.C.R. University of Science & Technology, Murthal, India
| | - Indu Kaushal
- Thin Film Laboratory, Department of Materials Science & Nanotechnology, D.C.R. University of Science & Technology, Murthal, India
| | - Surender Dhuan
- Thin Film Laboratory, Department of Materials Science & Nanotechnology, D.C.R. University of Science & Technology, Murthal, India
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Chauhan RP, Kumari A, Nehra AK, Ram H, Garg R, Banerjee PS, Karikalan M, Sharma AK. Genetic characterization and phylogenetic analysis of Sarcocystis suihominis infecting domestic pigs (Sus scrofa) in India. Parasitol Res 2020; 119:3347-3357. [PMID: 32833051 DOI: 10.1007/s00436-020-06857-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Accepted: 08/16/2020] [Indexed: 11/25/2022]
Abstract
A total of 57 tissue samples of domestic pigs (Sus scrofa) were collected from the meat outlets of five north Indian states and examined for sarcocystosis by histological and molecular methods. The genomic DNA extracted from five representative positive isolates was subjected to PCR amplification of the partial 18S rRNA gene followed by cloning and sequencing. Sequence analysis of the newly generated Indian isolates recorded 96.9-100.0% identity with published sequences of Sarcocystis suihominis. Two new haplotypes that have not been previously described manifested 99.5-100.0% nucleotide homology within themselves. In the phylogenetic analysis, Indian isolates of S. suihominis grouped together with S. suihominis originating from Italy, and they collectively formed a sister clade with Sarcocystis miescheriana within a clade containing various Sarcocystis spp. of ruminants having felids as final hosts. At the same time, this clade separated from a sister clade containing Sarcocystis spp. of bovid or cervid ruminants using canids as known or surmised definitive host. The current study established the phylogenetic relationship of Indian isolates of S. suihominis with various Sarcocystis spp. as well as with other taxa of Sarcocystidae family based on 18S rRNA gene for the first time.
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Affiliation(s)
- Ravi Pratap Chauhan
- Division of Parasitology, ICAR-Indian Veterinary Research Institute, Izatnagar, UP, India
| | - Ansu Kumari
- Department of Veterinary Medicine, Lala Lajpat Rai University of Veterinary and Animal Sciences, Hisar, Haryana, India
| | - Anil Kumar Nehra
- Division of Parasitology, ICAR-Indian Veterinary Research Institute, Izatnagar, UP, India
- Department of Veterinary Parasitology, Lala Lajpat Rai University of Veterinary and Animal Sciences, Hisar, Haryana, India
| | - Hira Ram
- Division of Parasitology, ICAR-Indian Veterinary Research Institute, Izatnagar, UP, India.
| | - Rajat Garg
- Division of Parasitology, ICAR-Indian Veterinary Research Institute, Izatnagar, UP, India
| | - P S Banerjee
- ICAR-Indian Veterinary Research Institute, Eastern Regional Station, Kolkata, WB, India
| | - M Karikalan
- Centre for Wildlife Conservation, Management and Disease Surveillance, ICAR-Indian Veterinary Research Institute, Izatnagar, UP, India
| | - A K Sharma
- Centre for Wildlife Conservation, Management and Disease Surveillance, ICAR-Indian Veterinary Research Institute, Izatnagar, UP, India
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Sharma AK, Thulasi Doss GP, Panneerselvam E, Ganesh SK, Krishna Kumar Raja VB. Use of knotless barbed sutures for closure of intraoral incisions for maxillofacial trauma: a randomised controlled trial. Br J Oral Maxillofac Surg 2020; 59:e72-e78. [PMID: 33384176 DOI: 10.1016/j.bjoms.2020.08.015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Accepted: 08/10/2020] [Indexed: 11/17/2022]
Abstract
The objective of this study was to assess the efficacy of knotless barbed sutures in intraoral wound closure for maxillofacial trauma in comparison with conventional (vicryl) sutures. This was a randomised controlled clinical trial involving 40 patients with isolated mandibular angle fractures who required intraoral incisions for open reduction and internal fixation (ORIF). The sample was randomised into the study group (20 patients) and control group (20 patients). Following fracture fixation by a standardised surgical protocol, the wound closure was done with bidirectional knotless barbed suture and vicryl for the study and control groups, respectively. The wounds were closed in layers (periosteum and mucosa). All operations were performed by a single surgeon. Outcome parameters measured were intraoperative wound closure time and wound healing using 'Landry's wound healing index' on the first, third, and seventh postoperative days. Statistically significant difference in suturing time was noted between the study and control group (p value <0.001). The study group demonstrated a mean (SD) suturing time of 9.46 (2.01) minutes, compared with the 17.61 (2.57) minutes in the control group. Wound healing was found to be better and statistically significant in the study group than the control group (p value<0.001). Knotless barbed suture is a promising alternative to vicryl for intraoral wound closure.
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Affiliation(s)
- A K Sharma
- Department of Oral & Maxillofacial Surgery, SRM Dental College & Hospital, Ramapuram Campus, Ramapuram, Chennai
| | - G P Thulasi Doss
- Department of Oral & Maxillofacial Surgery, SRM Dental College & Hospital, Ramapuram Campus, Ramapuram, Chennai
| | - E Panneerselvam
- Department of Oral & Maxillofacial Surgery, SRM Dental College & Hospital, Ramapuram Campus, Ramapuram, Chennai
| | - S K Ganesh
- Department of Oral & Maxillofacial Surgery, SRM Dental College & Hospital, Ramapuram Campus, Ramapuram, Chennai.
| | - V B Krishna Kumar Raja
- Department of Oral & Maxillofacial Surgery, SRM Dental College & Hospital, Ramapuram Campus, Ramapuram, Chennai
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Dravid A, Betha TP, Sharma AK, Gawali R, Mahajan U, Kulkarni M, Saraf C, Kore S, Dravid M, Rathod N. Efficacy and safety of a single-tablet regimen containing tenofovir disoproxil fumarate 300 mg, lamivudine 300 mg and efavirenz 400 mg as a switch strategy in virologically suppressed HIV-1-infected subjects on nonnucleoside reverse transcriptase inhibitor-containing first-line antiretroviral therapy in Pune, India. HIV Med 2020; 21:578-587. [PMID: 33021066 PMCID: PMC7539943 DOI: 10.1111/hiv.12912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2020] [Revised: 04/22/2020] [Accepted: 06/10/2020] [Indexed: 11/30/2022]
Abstract
OBJECTIVES As per National AIDS Control Organization (NACO) estimates, there are 2.1 million people living with HIV (PWH) in India, of whom 1.2 million are on first-line antiretroviral therapy (ART). This study explored the use of a single-tablet regimen containing tenofovir disoproxil fumarate 300 mg + lamivudine 300 mg + efavirenz 400 mg (TLE400 STR) as a first-line switch strategy in PWH in Pune, India. METHODS This retrospective cohort study was conducted in private sector ART clinics in three tertiary-level hospitals in Pune, India. PWH > 12 years of age (n = 502) who initiated first-line ART (predominantly TLE600 STR), completed ≥ 6 months of follow-up and achieved virological suppression [plasma viral load (VL) < 1000 HIV-1 RNA copies/mL] were identified and switched to TLE400 STR. The virological and immunological efficacy of TLE400 STR at 6 and 12 months of follow-up were noted. Grade 3/4 adverse events (especially efavirenz-related neuropsychiatric adverse events) leading to regimen discontinuation were also noted. RESULTS Of 502 PWH who switched to TLE400 STR, complete virological suppression (VL < 20 copies/mL) was maintained in more than 97% of patients at follow-up. TLE400 STR was successful in maintaining CD4 counts within the range observed at the start of the regimen. Grade 3/4 adverse events leading to TLE400 STR discontinuation were seen in 11 (2.2%) patients. Virological failure (VL > 1000 copies/mL) and treatment regimen failure were seen in six (1.2%) and 49 (9.8%) subjects, respectively. CONCLUSIONS TLE400 STR exhibits excellent efficacy and safety as a switch strategy and should be introduced in the Indian National ART Program, especially for PWH who are virologically suppressed on TLE600 STR.
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Affiliation(s)
- A Dravid
- Department of Medicine, Ruby Hall Clinic, Pune, Maharashtra, India.,Department of Medicine, Poona Hospital and Research Centre, Pune, Maharashtra, India.,Department of Medicine, Noble Hospital, Pune, Maharashtra, India
| | - T P Betha
- Department of Medicine, Poona Hospital and Research Centre, Pune, Maharashtra, India
| | - A K Sharma
- Department of Medicine, Poona Hospital and Research Centre, Pune, Maharashtra, India
| | - R Gawali
- Department of Medicine, Poona Hospital and Research Centre, Pune, Maharashtra, India
| | - U Mahajan
- Department of Biostatistics, VMK Diagnostics Private Limited, Pune, Maharashtra, India
| | - M Kulkarni
- Department of Medicine, Ruby Hall Clinic, Pune, Maharashtra, India
| | - C Saraf
- Department of Pathology, VMK Diagnostics Private Limited, Pune, Maharashtra, India
| | - S Kore
- Department of Dermatology, Ashwini Sahakari Rugnalaya and Research Centre, Solapur, Maharashtra, India
| | - M Dravid
- Infectious Disease Clinic, Dhule, Maharashtra, India
| | - N Rathod
- Department of Medicine, Apex Hospital, Kolhapur, Maharashtra, India
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Srivastava GN, Malwe AS, Sharma AK, Shastri V, Hibare K, Sharma VK. Molib: A machine learning based classification tool for the prediction of biofilm inhibitory molecules. Genomics 2020; 112:2823-2832. [DOI: 10.1016/j.ygeno.2020.03.020] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Revised: 03/14/2020] [Accepted: 03/22/2020] [Indexed: 10/24/2022]
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Rakesh CR, Sharma AK, Pathak N, Gahlot GPS. Primary malignant melanoma of the gastroesophageal junction: A rare and unusual disease. Med J Armed Forces India 2020; 77:367-370. [PMID: 34305293 DOI: 10.1016/j.mjafi.2020.03.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2017] [Accepted: 03/24/2020] [Indexed: 10/24/2022] Open
Abstract
Malignant melanoma, an aggressive tumor of skin, is also seen rarely in extra cutaneous sites like the gastrointestinal tract (GIT). Primary melanoma of the GIT by itself is a rare tumor; often metastatic at presentation and if found non-metastatic, it is rarely resectable. We are reporting a histopathologically confirmed case of primary malignant melanoma affecting the 'gastroesophageal junction', which we operated on.
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Affiliation(s)
- C R Rakesh
- Classified Specialist (Surgery & GI Surgeon), Army Hospital (R&R), New Delhi, India
| | - A K Sharma
- Senior Advisor (Surgery & GI Surgeon), Army Hospital (R&R), New Delhi, India
| | - Nishant Pathak
- Classified Specialist (Surgery & GI Surgeon), Military Hospital Jaipur, India
| | - G P S Gahlot
- Classified Specialist (Pathology & Oncopath), Army Hospital (R&R), New Delhi, India
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