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Rodon J, Arkenau HT, Funchain P, Hervieu A, Gao L, Liu M, Halim A, Mina M, Takahashi O, Benhadji K, Delaloge S. 467P Dose escalation of TAS-117 in patients with advanced solid tumors. Ann Oncol 2022. [DOI: 10.1016/j.annonc.2022.07.596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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2
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Joujima T, Oda M, Sasaguri M, Habu M, Kataoka S, Miyamura Y, Wakasugi-Sato N, Matsumoto-Takeda S, Takahashi O, Kokuryo S, Sago T, Yoshiga D, Tanaka T, Morimoto Y. Evaluation of velopharyngeal function using high-speed cine-magnetic resonance imaging based on T2-weighted sequences: a preliminary study. Int J Oral Maxillofac Surg 2019; 49:432-441. [PMID: 31451304 DOI: 10.1016/j.ijom.2019.08.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Revised: 06/06/2019] [Accepted: 08/07/2019] [Indexed: 10/26/2022]
Abstract
The objective was to introduce a new technique for visualizing the three-dimensional (3D) movements of velopharyngeal-related muscles using high-speed cine-magnetic resonance imaging (MRI) based on T2-weighted sequences. The evaluation of phonation- and water swallowing-related events was performed in 11 healthy subjects. Specifically, whether cine-MRI could precisely visualize normal velopharyngeal function during these two events was examined. The 3D movements of the soft palate, superior pharyngeal constrictor muscles, and levator veli palatini muscles were visualized in all 11 subjects. A noteworthy finding was that the magnetic resonance signals of the superior constrictor pharyngeal muscles and the levator veli palatini muscles were significantly higher during phonation and during water swallowing than at rest. This initial study suggests that the 3D movements of velopharyngeal-related muscles can be successfully and precisely visualized without side effects. The magnetic resonance signal changes seen in the superior pharyngeal constrictor and levator veli palatini muscles using the technique described here should be useful to develop better methods of evaluation of velopharyngeal function.
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Affiliation(s)
- T Joujima
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan
| | - M Oda
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan
| | - M Sasaguri
- Division of Maxillofacial Surgery, Kyushu Dental University, Kitakyushu, Japan
| | - M Habu
- Division of Maxillofacial Surgery, Kyushu Dental University, Kitakyushu, Japan
| | - S Kataoka
- Division of Anatomy, Kyushu Dental University, Kitakyushu, Japan
| | - Y Miyamura
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan
| | - N Wakasugi-Sato
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan
| | - S Matsumoto-Takeda
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan
| | - O Takahashi
- Division of Maxillofacial Surgery, Kyushu Dental University, Kitakyushu, Japan
| | - S Kokuryo
- Division of Oral Medicine, Kyushu Dental University, Kitakyushu, Japan
| | - T Sago
- Division of Dental Anaesthesiology, Kyushu Dental University, Kitakyushu, Japan
| | - D Yoshiga
- Division of Oral Medicine, Kyushu Dental University, Kitakyushu, Japan
| | - T Tanaka
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan
| | - Y Morimoto
- Division of Oral and Maxillofacial Radiology, Kyushu Dental University, Kitakyushu, Japan.
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Horikawa Y, Tokushima T, Takahashi O, Harada Y, Hiraya A, Shin S. Effect of amino group protonation on the carboxyl group in aqueous glycine observed by O 1s X-ray emission spectroscopy. Phys Chem Chem Phys 2018; 20:23214-23221. [DOI: 10.1039/c7cp08305j] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The valence electronic structures of the amino acid glycine in aqueous solution were investigated in detail through X-ray emission spectroscopy at O 1s excitation under selective excitation conditions of the CO site in the carboxyl group.
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Affiliation(s)
| | | | - O. Takahashi
- Department of Chemistry
- Graduate School of Science
- Hiroshima University
- Higashi-Hiroshima
- Japan
| | - Y. Harada
- Institute for Solid State Physics
- The University of Tokyo
- Kashiwa
- Japan
- Synchrotron Radiation Research Organization
| | - A. Hiraya
- Department of Physical Science
- Hiroshima University
- Higashi-Hiroshima
- Japan
| | - S. Shin
- Institute for Solid State Physics
- The University of Tokyo
- Kashiwa
- Japan
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4
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Kishi M, Mori S, Shigemoto K, Nakamura H, Takahashi O, Sakakibara R, Tuyusaki Y, Tateno F, Aiba Y. Low-density lipoprotein receptor-related protein 4 (LRP4) antibody positive myasthenia gravis: Electrophysiological evaluations in model mice (IN VITRO) and a patient. J Neurol Sci 2017. [DOI: 10.1016/j.jns.2017.08.3546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Nakamura N, Kawamori J, Takahashi O, Shikama N, Sekiguchi K, Takahashi T, Kato S, Ogita M, Haga C, Ito R, Nishimura K, Yamano T, Yoshida K, Motegi A, Akimoto T. Palliative Radiation Therapy for Breast Cancer With Skin Invasion: A Multi-institutional Prospective Observational Study. Int J Radiat Oncol Biol Phys 2017. [DOI: 10.1016/j.ijrobp.2017.06.1858] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Affiliation(s)
| | - T. Ohta
- Research Institute for Humanity and Nature Kyoto Japan
| | - O. Takahashi
- Chitose Archaeological Operations Center Chitose Board of Education Chitose Hokkaido Japan
| | - I. Tayasu
- Research Institute for Humanity and Nature Kyoto Japan
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Ljungberg MP, Zhovtobriukh I, Takahashi O, Pettersson LGM. Core-hole-induced dynamical effects in the x-ray emission spectrum of liquid methanol. J Chem Phys 2017; 146:134506. [PMID: 28390372 DOI: 10.1063/1.4979656] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We compute the x-ray emission spectrum of liquid methanol, with the dynamical effects that result from the creation of the core hole included in a semiclassical way. Our method closely reproduces a fully quantum mechanical description of the dynamical effects for relevant one-dimensional models of the hydrogen-bonded methanol molecules. For the liquid, we find excellent agreement with the experimental spectrum, including the large isotope effect in the first split peak. The dynamical effects depend sensitively on the initial structure in terms of the local hydrogen-bonding (H-bonding) character: non-donor molecules contribute mainly to the high-energy peak while molecules with a strong donating H-bond contribute to the peak at lower energy. The spectrum thus reflects the initial structure mediated by the dynamical effects that are, however, seen to be crucial in order to reproduce the intensity distribution of the recently measured spectrum.
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Affiliation(s)
- M P Ljungberg
- Donostia International Physics Center, Paseo Manuel de Lardizabal, 4, E-20018 Donostia-San Sebastián, Spain
| | - I Zhovtobriukh
- FYSIKUM, Stockholm University, AlbaNova, S-106 91 Stockholm, Sweden
| | - O Takahashi
- Institute for Sustainable Sciences and Development, Hiroshima University, 1-3-1, Kagamiyama, Higashi-Hiroshima 739-8526, Japan
| | - L G M Pettersson
- FYSIKUM, Stockholm University, AlbaNova, S-106 91 Stockholm, Sweden
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Matsushita K, Takahashi O, Shimbo M, Endo F, Hattori K. 120 Serum PSA as a Predictor of Symptomatic Hypogonadism. J Sex Med 2017. [DOI: 10.1016/j.jsxm.2016.11.073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Yasuda M, Shinoda M, Honda K, Fujita M, Kawata A, Nagashima H, Watanabe M, Shoji N, Takahashi O, Kimoto S, Iwata K. Maternal Separation Induces Orofacial Mechanical Allodynia in Adulthood. J Dent Res 2016; 95:1191-7. [DOI: 10.1177/0022034516661159] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
It is well known that exposure to maternal separation (MS) in early life causes plastic changes in the nervous system in adulthood, occasionally resulting in ubiquitous chronic pain. However, the pathogenic mechanisms of pain hypersensitivity remain unclear. Here, the authors examined the involvement of corticosterone in orofacial mechanical hypersensitivity induced by MS. To establish a rat model of MS, pups were placed in isolated cages 180 min/d and kept in a temperature-controlled environment at 22 ± 2 °C for 14 d. Mechanical allodynia in the whisker pad skin in adulthood was induced by MS and was significantly suppressed by successive postnatal subcutaneous administration of the glucocorticoid receptor antagonist mifepristone. Corticosterone levels were increased in the serum of MS rats, and successive postnatal administration of subcutaneous corticosterone to naive rats induced mechanical allodynia in the whisker pad skin. The number of P2X3 receptor-immunoreactive (P2X3R-IR) trigeminal ganglion (TG) neurons innervating the whisker pad skin was significantly increased in MS rats and decreased following subcutaneous administration of mifepristone. The number of P2X3R-IR TG neurons innervating the whisker pad skin was also significantly increased following successive postnatal administration of subcutaneous corticosterone in naive rats. Moreover, the mechanical allodynia was suppressed 30 min after administration of the P2X3R antagonist A317491 to the whisker pad skin in MS rats. These findings suggest that the increase in P2X3R-IR TG neurons innervating the whisker pad skin via enhanced neonatal corticosterone signaling by MS plays an important role in orofacial mechanical allodynia in adulthood.
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Affiliation(s)
- M. Yasuda
- Department of Oral Function and Restoration, Division of Pediatric Dentistry, Graduate School of Dentistry, Kanagawa Dental University, Yokosuka, Japan
| | - M. Shinoda
- Department of Physiology, Nihon University School of Dentistry, Tokyo, Japan
- Division of Functional Morphology, Dental Research Center, Nihon University School of Dentistry, Tokyo, Japan
| | - K. Honda
- Department of Physiology, Nihon University School of Dentistry, Tokyo, Japan
| | - M. Fujita
- Department of Oral Function and Restoration, Division of Pediatric Dentistry, Graduate School of Dentistry, Kanagawa Dental University, Yokosuka, Japan
| | - A. Kawata
- Department of Histology, Embryology and Neuroanatomy, Kanagawa Dental University, Yokosuka, Japan
| | - H. Nagashima
- Department of Physiology, Nihon University School of Dentistry, Tokyo, Japan
- Department of Periodontology, Nihon University School of Dentistry, Tokyo, Japan
| | - M. Watanabe
- Department of Physiology, Nihon University School of Dentistry, Tokyo, Japan
- Department of Periodontology, Nihon University School of Dentistry, Tokyo, Japan
| | - N. Shoji
- Division of Oral Diagnosis, Tohoku University Graduate School of Dentistry, Sendai, Japan
| | - O. Takahashi
- Department of Histology, Embryology and Neuroanatomy, Kanagawa Dental University, Yokosuka, Japan
| | - S. Kimoto
- Department of Oral Function and Restoration, Division of Pediatric Dentistry, Graduate School of Dentistry, Kanagawa Dental University, Yokosuka, Japan
| | - K. Iwata
- Department of Physiology, Nihon University School of Dentistry, Tokyo, Japan
- Division of Functional Morphology, Dental Research Center, Nihon University School of Dentistry, Tokyo, Japan
- Division of Applied System Neuroscience Advanced Medical Research Center, Nihon University Graduate School of Medical Science, Tokyo, Japan
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Nakamura N, Takahashi O, Zenda S, Kawamori J, Ogita M, Onozawa M, Arahira S, Toshima M, Motegi A, Hirano Y, Hojo H, Akimoto T. Neuropathic Pain Features in Patients with Bone Metastases. Clin Oncol (R Coll Radiol) 2016; 28:204-8. [DOI: 10.1016/j.clon.2015.10.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2015] [Revised: 10/12/2015] [Accepted: 10/13/2015] [Indexed: 12/25/2022]
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Matsukawa H, Fujii M, Uemura A, Suzuki K, Yamamoto D, Takahashi O, Niimi Y. Pathology of embolic debris in carotid artery stenting. Acta Neurol Scand 2015; 131:197-202. [PMID: 25312877 DOI: 10.1111/ane.12303] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/04/2014] [Indexed: 11/27/2022]
Abstract
BACKGROUND The relationship between magnetic resonance (MR) plaque imaging and the pathology of distal embolic debris is unknown. We aimed to evaluate the relationship between the pathology of embolic debris in the embolic filter during carotid artery stenting (CAS), MR plaque imaging, and new ischemic lesions on diffusion-weighted imaging (DWI). METHOD We prospectively reviewed the 36 patients who underwent CAS using a filter-type embolic protection device. Pathology of debris was categorized into thrombosis, inflammatory cells, elastic fiber, and calcification. We compared the clinical parameters, MR plaque imaging, and pathological characteristics of the embolic debris retained in the filter during CAS on univariate analysis. RESULTS Eleven patients had and 25 patients did not have new lesion on DWI. All of DWI-high lesions were identified in affected side middle cerebral artery territory. Embolic debris was microscopically confirmed in 28 patients (78%); thrombosis in 11 (31%), inflammatory cells in 13 (36%), elastic fiber in 12 (33%), and calcification in 9 (25%). Proportion of asymptomatic carotid stenosis, intra-operative bradycardia/hypotension, and inflammatory cells of debris were significantly higher in patients with new DWI-high lesions. There was no significant relationship between the pathological characteristics and MR plaque imaging of distal embolic debris. CONCLUSIONS Our study showed that new DWI-high lesions might be influenced by types of debris in the filter. The need for future studies specifically examine the association of pathology of debris and findings of MR plaque imaging with new DWI-high lesions during CAS is emphasized.
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Affiliation(s)
- H. Matsukawa
- Department of Neurosurgery; St. Luke's International Hospital; Tokyo Japan
| | - M. Fujii
- Department of Neurosurgery; St. Luke's International Hospital; Tokyo Japan
| | - A. Uemura
- Department of Neuroendovascular Therapy; St. Luke's International Hospital; Tokyo Japan
| | - K. Suzuki
- Department of Pathology; St. Luke's International Hospital; Tokyo Japan
| | - D. Yamamoto
- Department of Neurosurgery; St. Luke's International Hospital; Tokyo Japan
| | - O. Takahashi
- Division of General Internal Medicine; Department of Medicine; St. Luke's International Hospital; Tokyo Japan
| | - Y. Niimi
- Department of Neuroendovascular Therapy; St. Luke's International Hospital; Tokyo Japan
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Matsukawa H, Shinoda M, Fujii M, Takahashi O, Murakata A. Risk factors for mortality in patients with non-traumatic pontine hemorrhage. Acta Neurol Scand 2015; 131:240-5. [PMID: 25273885 DOI: 10.1111/ane.12312] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/27/2014] [Indexed: 10/24/2022]
Abstract
OBJECTIVES For patients with non-traumatic pontine hemorrhage (PH) who will survive, determining prognosis is vital for appropriate therapeutic planning in the acute stage. This study aimed to determine reliable prognostic factors of mortality in patients with PH. MATERIALS AND METHODS The cases of a total of 118 consecutive PH patients were reviewed. We compared clinical and radiological characteristics between patients who died and survivors by the log-rank test and performed multivariate analysis by the Cox proportional hazards model using variables that were marginally or significantly associated with PH-related death on the log-rank test (P < 0.20). RESULTS The median length of follow-up was 51 days (interquartile range: 7-742 days). Sixty-six patients (56%) died and 52 (44%) survived during follow-up period. Multivariate analysis showed that Glasgow Coma Scale score <9, hyperthermia (a core temperature of ≥39°C), maximum hematoma diameter more than 27 mm, and hematoma extension to midbrain and/or thalamus were significantly related to PH-related death. The Kaplan-Meier method showed that patients without these four factors had successively longer period at PH-related death (21 patients without factors: mean 2900 days; 97 patients with at least one of four factors: mean 820 days). CONCLUSIONS Promptly identifying PH patients who are most likely die is important. The decision to stop life support in patients with PH is difficult, but factors, which are shown in this study, may be used to determine the level of care.
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Affiliation(s)
- H. Matsukawa
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - M. Shinoda
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - M. Fujii
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - O. Takahashi
- Division of General Internal Medicine; Department of Medicine; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - A. Murakata
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
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Matsukawa H, Shinoda M, Fujii M, Uemura A, Takahashi O, Niimi Y. Arterial stiffness as a risk factor for cerebral aneurysm. Acta Neurol Scand 2014; 130:394-9. [PMID: 25214208 DOI: 10.1111/ane.12286] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/10/2014] [Indexed: 12/31/2022]
Abstract
OBJECTIVES A low ankle-brachial index (ABI) is associated with increased mortality and risk of myocardial infarction and stroke in the general population. Arterial stiffness can be assessed non-invasively by the measurement of brachial-ankle pulse wave velocity (PWV), a simple and reproducible method. Because the importance of ABI and baPWV in the pathogenesis of cerebral aneurysms remains uncertain, we aimed to measure ABI and baPWV in patients with intracranial saccular and dissecting aneurysms to clarify whether these aneurysms are associated with arterial stiffness and atherosclerosis. MATERIALS AND METHODS We prospectively investigated 78 patients diagnosed with intracranial saccular (n = 66) and dissecting (n = 12) aneurysms. The control group consisted of an age- and gender-matched normal population. We compared the clinical characteristics in patients with intracranial saccular aneurysms and controls, those with intracranial dissecting aneurysms and controls, and those who had cerebral aneurysms with and without subarachnoid hemorrhage. We also compared ABI and baPWV among saccular aneurysm locations and evaluated the correlation between the number of saccular aneurysms and ABI and baPWV. RESULTS Multivariate logistic regression analysis shows that hypertension and higher baPWV (>1400 cm/s) are significantly associated with saccular aneurysms. Simple regression analysis revealed no correlation between the number of saccular aneurysms and ABI (r = -0.064, P = 0.611), and baPWV (r = 0.007, P = 0.956). CONCLUSIONS The baPWV was associated with intracranial saccular aneurysms even after adjustment of hypertension and smoking. Assessment of the baPWV may aid the evaluation of the intracranial saccular aneurysm and the development of strategies for screening patients with intracranial saccular aneurysms.
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Affiliation(s)
- H. Matsukawa
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - M. Shinoda
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - M. Fujii
- Department of Neurosurgery; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - A. Uemura
- Department of Neuroendovascular Therapy; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - O. Takahashi
- Division of General Internal Medicine; Department of Medicine; St. Luke's International Hospital; Chuo-ku Tokyo Japan
| | - Y. Niimi
- Department of Neuroendovascular Therapy; St. Luke's International Hospital; Chuo-ku Tokyo Japan
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Affiliation(s)
- O Takahashi
- St. Luke's Life Science Institute, Tokyo, Japan
| | - S Ohde
- St. Luke's Life Science Institute, Tokyo, Japan
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Furutani S, Komaki R, Smith P, Jürgensmeier J, Takahashi O, Rabin T, Herbst R, O'Reilly M. MEK Inhibition by Selumetinib Enhances the Antitumor and Anti-Metastatic Effects of Chemoradiation Therapy in Orthotopic Human Lung Cancer Models. Int J Radiat Oncol Biol Phys 2014. [DOI: 10.1016/j.ijrobp.2014.05.2300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Ogita M, Sekiguchi K, Akahane K, Kawamori J, Ito R, Haga C, Arai S, Takahashi O. Randomized, Prospective Trial of Moisturizer Efficacy for the Treatment of Skin Dryness Following Radiation Therapy After Breast-Conserving Surgery. Int J Radiat Oncol Biol Phys 2014. [DOI: 10.1016/j.ijrobp.2014.05.875] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Gejo T, Ikegami T, Honma K, Takahashi O, Shigemasa E, Hikosaka Y, Tamenori Y. Dynamics of oxygen Rydberg atom generation following O 1sinner-shell excitation of H2O. J Chem Phys 2014; 140:214310. [DOI: 10.1063/1.4880557] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Sakakibara R, Tateno F, Kishi M, Tsuyusaki Y, Yamamoto T, Uchiyama T, Takahashi O. Tolterodine activates the frontal micturition area of OAB patients: A real-time measure of oxyhemoglobin concentration changes during urodynamics. Auton Neurosci 2013. [DOI: 10.1016/j.autneu.2013.08.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Nakamura N, Ito R, Takahashi O, Haga C, Shikama N, Akahane K, Ogita M, Mizuno N, Tamaki S, Sekiguchi K. Fatigue During Breast Radiation Therapy and its Predictive Factors. Int J Radiat Oncol Biol Phys 2013. [DOI: 10.1016/j.ijrobp.2013.06.529] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Frasinski LJ, Zhaunerchyk V, Mucke M, Squibb RJ, Siano M, Eland JHD, Linusson P, v d Meulen P, Salén P, Thomas RD, Larsson M, Foucar L, Ullrich J, Motomura K, Mondal S, Ueda K, Osipov T, Fang L, Murphy BF, Berrah N, Bostedt C, Bozek JD, Schorb S, Messerschmidt M, Glownia JM, Cryan JP, Coffee RN, Takahashi O, Wada S, Piancastelli MN, Richter R, Prince KC, Feifel R. Dynamics of hollow atom formation in intense x-ray pulses probed by partial covariance mapping. Phys Rev Lett 2013; 111:073002. [PMID: 23992061 DOI: 10.1103/physrevlett.111.073002] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2013] [Indexed: 05/23/2023]
Abstract
When exposed to ultraintense x-radiation sources such as free electron lasers (FELs) the innermost electronic shell can efficiently be emptied, creating a transient hollow atom or molecule. Understanding the femtosecond dynamics of such systems is fundamental to achieving atomic resolution in flash diffraction imaging of noncrystallized complex biological samples. We demonstrate the capacity of a correlation method called "partial covariance mapping" to probe the electron dynamics of neon atoms exposed to intense 8 fs pulses of 1062 eV photons. A complete picture of ionization processes competing in hollow atom formation and decay is visualized with unprecedented ease and the map reveals hitherto unobserved nonlinear sequences of photoionization and Auger events. The technique is particularly well suited to the high counting rate inherent in FEL experiments.
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Affiliation(s)
- L J Frasinski
- Blackett Laboratory, Imperial College London, London, United Kingdom.
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Oda A, Yamaotsu N, Hirono S, Takano Y, Fukuyoshi S, Nakagaki R, Takahashi O. Evaluations of the conformational search accuracy of CAMDAS using experimental three-dimensional structures of protein-ligand complexes. ACTA ACUST UNITED AC 2013. [DOI: 10.1088/1742-6596/454/1/012028] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Schiros T, Andersson KJ, MacNaughton J, Gladh J, Matsuda A, Öström H, Takahashi O, Pettersson LGM, Nilsson A, Ogasawara H. Unique water-water coordination tailored by a metal surface. J Chem Phys 2013; 138:234708. [DOI: 10.1063/1.4809680] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Komiya K, Kurashima A, Ihi T, Nagai H, Matsumoto N, Ishii H, Morimoto K, Takahashi O, Kudoh S, Kadota JI. P300 Erythromycin monotherapy for Mycobacterium avium complex infection. Int J Antimicrob Agents 2013. [DOI: 10.1016/s0924-8579(13)70541-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Mucke M, Eland J, Takahashi O, Linusson P, Lebrun D, Ueda K, Feifel R. Formation and decay of core-orbital vacancies in the water molecule. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2012.11.094] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Tabayashi K, Takahashi O, Namatame H, Taniguchi M. Substituent R-effects on the core–electron excitation spectra of hydrogen-bonded carboxylic-acid (R–COOH) clusters: Comparison between acetic-acid and formic-acid clusters. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2012.10.043] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Suzuki IH, Kono Y, Ikeda A, Oi M, Ouchi T, Ueda K, Tamenori Y, Takahashi O, Nagaoka S. Cascade Auger decays following Si KL23L23 Auger transitions in SiF4. J Chem Phys 2013; 138:024302. [DOI: 10.1063/1.4773344] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- I H Suzuki
- Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba 305-0801, Japan.
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Ohigashi S, Sudo K, Onodera H, Kobayashi D, Takahashi O, Takahashi T, Asahara T, Nomoto K. Changes in the Intestinal Environments of Patients with Colorectal Cancer or Adenoma. Ann Oncol 2012. [DOI: 10.1016/s0923-7534(20)33197-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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Shiina T, Suzuki S, Ozaki Y, Taira H, Kikkawa E, Shigenari A, Oka A, Umemura T, Joshita S, Takahashi O, Hayashi Y, Paumen M, Katsuyama Y, Mitsunaga S, Ota M, Kulski JK, Inoko H. Super high resolution for single molecule-sequence-based typing of classical HLA loci at the 8-digit level using next generation sequencers. ACTA ACUST UNITED AC 2012; 80:305-16. [PMID: 22861646 DOI: 10.1111/j.1399-0039.2012.01941.x] [Citation(s) in RCA: 120] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2012] [Accepted: 07/03/2012] [Indexed: 01/06/2023]
Abstract
Current human leukocyte antigen (HLA) DNA typing methods such as the sequence-based typing (SBT) and sequence-specific oligonucleotide (SSO) methods generally yield ambiguous typing results because of oligonucleotide probe design limitations or phase ambiguity for HLA allele assignment. Here we describe the development and application of the super high-resolution single-molecule sequence-based typing (SS-SBT) of HLA loci at the 8-digit level using next generation sequencing (NGS). NGS which can determine an HLA allele sequence derived from a single DNA molecule is expected to solve the phase ambiguity problem. Eight classical HLA loci-specific polymerase chain reaction (PCR) primers were designed to amplify the entire gene sequences from the enhancer-promoter region to the 3' untranslated region. Phase ambiguities of HLA-A, -B, -C, -DRB1 and -DQB1 were completely resolved and unequivocally assigned without ambiguity to single HLA alleles. Therefore, the SS-SBT method described here is a superior and effective HLA DNA typing method to efficiently detect new HLA alleles and null alleles without ambiguity.
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Affiliation(s)
- T Shiina
- Division of Basic Medical Science and Molecular Medicine, Department of Molecular Life Science, Tokai University School of Medicine, Isehara, Kanagawa, Japan
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Matsukawa H, Shinoda M, Fujii M, Takahashi O, Yamamoto D, Murakata A, Ishikawa R. Factors associated with lobar vs. non-lobar intracerebral hemorrhage. Acta Neurol Scand 2012; 126:116-21. [PMID: 22067041 DOI: 10.1111/j.1600-0404.2011.01615.x] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
OBJECTIVES The relationship between body mass index (BMI) and stroke subtypes has received more research attention than that between BMI and location of intracerebral hemorrhage (ICH). Lobar hemorrhage (LH) differs from non-LH primarily in terms of etiology, i.e. cerebral amyloid angiopathy is the main cause of LH. This study aimed to determine the relationship between BMI and ICH. MATERIALS AND METHODS In this retrospective study involving 460 consecutive patients with ICH, BMI was significantly lower in LH than for other ICH locations. BMI categories were underweight (BMI < 18.5 kg/m(2)), normal weight (18.5-23.0 kg/m(2)), overweight (23.0-27.5 kg/m(2)), or obesity (≥27.5 kg/m(2)). Outcome at 1 year was evaluated by the modified Rankin Scale (mRS). We investigated the relationship of BMI and other clinical characteristics with LH and non-LH. RESULTS LH was associated with age (>70 years), underweight, unfavorable outcome (mRS ≥3), and daily alcohol consumption. Hypertension and intraventricular bleeding were significantly less common in patients with LH than those with non-LH. CONCLUSIONS Alongside risk factors conventionally thought to be related to LH, underweight may also be a LH-related factor, specifically in the elderly.
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Affiliation(s)
- H Matsukawa
- Department of Neurosurgery, St. Luke's International Hospital, Tokyo, Japan.
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Abstract
BACKGROUND To identify the optimal interval for repeat prostate-specific antigen (PSA) testing to screen for prostate cancer in healthy adults. PATIENTS AND METHODS A retrospective cohort study was conducted on 7332 healthy males without prostate cancer at baseline from 2005 to 2008. Participants underwent annual health checkups including PSA testing at the Center for Preventive Medicine in Japan. Participants with high PSA (≥ 4.0 ng/ml) underwent further examination for prostate cancer. A subgroup analysis was conducted age group (<50 years, ≥ 50 years). RESULTS Mean age was 50 years. Mean PSA at baseline was 1.2 ng/ml. In over 50-year group, for those with initial PSA of <1.0, 1.0-1.9, 2.0-2.9, and 3.0-3.9 ng/ml at baseline, the 3-year cumulative incidence of prostate cancer was 0%, 0.1%, 0.3%, and 5.7%, respectively. No prostate cancer was identified in those <50 years, regardless of PSA level. CONCLUSIONS If PSA screening is recommended, males >50 years with PSA of 3.0-3.9 ng/ml at baseline should undergo rescreening at 2 years. For men with PSA <3.0 ng/ml, PSA rescreening at intervals of ≥ 3 years is appropriate. PSA screening may not be indicated in males of <50 years of age.
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Affiliation(s)
- D Kobayashi
- Department of Medicine, Division of General Internal Medicine, St Luke's International Hospital, Tokyo.
| | - O Takahashi
- Department of Medicine, Division of General Internal Medicine, St Luke's International Hospital, Tokyo; Center for Clinical Epidemiology, St Luke's Life Science Institute, Tokyo, Japan
| | - T Fukui
- Department of Medicine, Division of General Internal Medicine, St Luke's International Hospital, Tokyo; Center for Clinical Epidemiology, St Luke's Life Science Institute, Tokyo, Japan
| | - P P Glasziou
- Centre for Research in Evidence-Based Practice, Bond University, Gold Coast, Australia
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Yamauchi H, Natori A, Hayashi N, Soejima K, Takahashi O, Fukui T, Nakamura S, Cristofanilli M, Ueno N. P4-20-05: Inflammatory Breast Cancer: Comparison of Epidemiology, Biology, and Prognosis between Japan and the United States, a Hospital-Based Study. Cancer Res 2011. [DOI: 10.1158/0008-5472.sabcs11-p4-20-05] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background: Inflammatory breast cancer (IBC) is a challenging disease characterized by low incidence, rapid progression, and poor survival. The epidemiology of IBC has been slow to emerge, given that the rarity of IBC makes large prospective clinical trials difficult. Compared to non-IBC, well-established features of IBC include a younger age of onset and lower frequency of hormone receptor positivity. Higher body mass index (BMI) is a purported risk factor. Previous reports also suggest that IBC is associated with more racial disparities, including incidence and age at diagnosis. The epidemiology of IBC in East Asia, however, has not been investigated. We performed a comparative study of IBC in Japan versus the United States to determine its epidemiologic and clinical features and to evaluate the differences in epidemiological factors between the two countries.
Patients and Method: Patients who visited St. Luke's International hospital (SLIH) in Tokyo, Japan and The University of Texas MD Anderson Cancer Center (MDA) in Texas, USA between 2003 and 2009 were identified. Epidemiological and biological data were collected from electronic medical records. Patient and tumor characteristics were tabulated and stratified by hospital. Kaplan-Meier curves were created for survival estimates and log-rank test was used for cross-group comparisons. Cox proportional-hazard analysis was used to identify a subset of significant prognostic variables that related to overall survival.
Result: 34 patients at SLIH and 531 patients at MDA were identified. Mean age at diagnosis was 52 years old (range, 32–81, SD, 10.8) and 50 years old (range, 22–87, SD, 11.6), respectively (P=0.476). Mean BMI was 22.9 kg/m2 (range, 17.3−30.5, SD 3.3 ) and 31.0 kg/m2 (range, 13.6−88.9, SD, 7.8) respectively (P<0.01). Clinical Staging was not significantly different; Stage IIIB 38.2%, Stage IIIC 26.5%, and Stage IV 32.4% at SLIH versus 48.6%, 23.7%, and 27.3% at MDA (P= 0.167). Estrogen receptor (ER) and progesterone receptor (PR) negative cases were, respectively, 50.0% and 64.7% at SLIH and 50.5% and 64.2% at MDA (ER, P= 0.935; PR, P=0.908). Her-2 over-expression cases were 38.2% at SLIH and 28.6% at MDA (P=0.174). A significant difference in nuclear grade was seen between SLIH and MDA: 20.6% at SLIH were Grade 3 versus 68.7% at MDA (P<0.01). Median overall survival at SLIH was 3.6 years versus 2.3 years at MDA (P=0.570). No prognostic factors were associated with overall survival.
Conclusion: Though IBC at SLIH differed significantly from IBC at MDA by several epidemiologic and biologic factors, there was no significant difference in survival. To define the epidemiological, prognostic, and risk factors of IBC in Japan, as well as in the world, further studies are needed.
Citation Information: Cancer Res 2011;71(24 Suppl):Abstract nr P4-20-05.
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Affiliation(s)
- H Yamauchi
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - A Natori
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - N Hayashi
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - K Soejima
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - O Takahashi
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - T Fukui
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - S Nakamura
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - M Cristofanilli
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
| | - N Ueno
- 1St. Luke's International Hospital, Chuo-ku, Tokyo, Japan; Showa University, Shinagawa-ku, Tokyo, Japan; Fox Chase Cancer Center, Philadelphia, PA; The University of Texas M.D. Anderson Cancer Center, Houston, TX
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Suzuki IH, Kono Y, Ikeda A, Ouchi T, Ueda K, Takahashi O, Higuchi I, Tamenori Y, Nagaoka S. Projection of Si 1s photoexcited orbitals into resonant Auger electron spectra in KLL decays of Si(CH3)4 and SiF4. J Chem Phys 2011; 134:084312. [PMID: 21361544 DOI: 10.1063/1.3556942] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Spectator resonant KL(23)L(23) Auger electron spectra have been measured in the Si 1s photoexcitation region of Si(CH(3))(4) using monochromatized undulator radiation combined with a hemispherical electron spectrometer. The broad peak with high intensity in a total ion yield spectrum, coming mainly from excitation of a 1s electron into the 6t(2) vacant orbital, induces a spectator Auger decay in which the excited electron remains in its excited orbital. The component on the higher energy side of this peak through 1s excitation into a Rydberg orbital produces resonant Auger decays in which the excited Rydberg electron moves into a slightly higher Rydberg orbital, or is partly shaken up to a significantly higher Rydberg orbital. These findings of Si(CH(3))(4) indicate a clear contrast to those for SiF(4), in which the 1s excitation into a Rydberg orbital induces a shake-down phenomenon as well as a shake-up one. The results of these molecules exhibit a clear splitting effect among excited orbitals which are smeared out by overlapping due to lifetime widths and due to densely populated levels in the 1s electron excitation spectrum. This is consistent with the calculation on photoexcitation within the framework of density functional theory.
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Affiliation(s)
- I H Suzuki
- Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), Tsukuba, Japan.
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Masakado Y, Kodama M, Takahashi O, Sasao Y, Kasahara T, Tochikura M, Koyama Y, Hanayama K, Fujita Y. P30-1 The origin of the premotor potential recorded from the second lumbrical (1): in normal subject. Clin Neurophysiol 2010. [DOI: 10.1016/s1388-2457(10)61144-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Abstract
In general, the docking scoring tends to have a size dependence related to the ranking of compounds. In this paper, we describe a novel method of parameter optimization for docking scores which reduce the size dependence and can efficiently discriminate active compounds from chemical databases. This method is based on a simplified theoretical model of docking scores which enables us to utilize large amounts of data of known active and inactive compounds for a particular target without requiring large computational resources or a complicated procedure. This method is useful for making scoring functions for the identification of novel scaffolds using the knowledge of active compounds for a particular target or a customized scoring function for an interesting family of drug targets.
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Affiliation(s)
- O Takahashi
- Research & Development Division, PharmaDesign Inc., Tokyo, Japan.
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Oura M, Takahashi O, Gejo T, Tokushima T, Horikawa Y, Senba Y, Ohashi H, Shin S. Vibrationally resolved resonant x-ray emission spectra of diatomic molecules. ACTA ACUST UNITED AC 2010. [DOI: 10.1088/1742-6596/235/1/012016] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Akao M, Saito K, Okada K, Takahashi O, Tabayashi K. Thermal unimolecular decomposition of acetic anhydride in the gas phase. ACTA ACUST UNITED AC 2010. [DOI: 10.1002/bbpc.19961000722] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Schiros T, Takahashi O, Andersson KJ, Öström H, Pettersson LGM, Nilsson A, Ogasawara H. The role of substrate electrons in the wetting of a metal surface. J Chem Phys 2010; 132:094701. [DOI: 10.1063/1.3292681] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Mochizuki T, Otani N, Takahashi O, Ishimatsu S. Can we predict neurological prognoses with computed tomography just after resuscitation? Crit Care 2010. [PMCID: PMC2934545 DOI: 10.1186/cc8562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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41
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Tamenori Y, Takahashi O, Yamashita K, Yamaguchi T, Okada K, Tabayashi K, Gejo T, Honma K. Hydrogen bonding in acetone clusters probed by near-edge x-ray absorption fine structure spectroscopy in the carbon and oxygen K-edge regions. J Chem Phys 2009; 131:174311. [DOI: 10.1063/1.3257962] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
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42
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Suzuki IH, Nitta A, Fukuzawa H, Ueda K, Takahashi O, Tamenori Y, Nagaoka S. Site-specific behavior in de-excitation spectra of F(3)SiCH(2)CH(2)Si(CH(3))(3) in the Si 1s excitation region. J Chem Phys 2009; 131:164309. [PMID: 19894949 DOI: 10.1063/1.3257639] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Excitation (total ion yield) and de-excitation (resonant photoemission) spectra have been measured in the Si 1s photoexcitation region of the F(3)SiCH(2)CH(2)Si(CH(3))(3) molecule using monochromatized undulator radiation. Theoretical calculations within the framework of density functional theory have reproduced the observed total ion yield spectrum very well. The first peak at the lowest photon energy, coming from Si 1s excitation at the trimethyl side into a vacant orbital, induces spectator Auger decays in which the excited electron remains in its valence orbital. The second peak produced through excitation of Si 1s electron at the trifluoride side generates resonant Auger decays in which the excited valence electron remains predominantly also in the valence orbital or is partly shaken up into higher Rydberg orbitals. The third peak generated through Si 1s excitation at the trifluoride side produces resonant Auger decays in which the excited Rydberg electron remains or is partly shaken down to a lower lying valence molecular orbital. These findings exhibit a clear distinction between resonant Auger decays following photoexcitation of Si 1s electrons under different chemical environments.
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Affiliation(s)
- I H Suzuki
- Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba 305-0801, Japan.
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Huang C, Wikfeldt KT, Tokushima T, Nordlund D, Harada Y, Bergmann U, Niebuhr M, Weiss TM, Horikawa Y, Leetmaa M, Ljungberg MP, Takahashi O, Lenz A, Ojamäe L, Lyubartsev AP, Shin S, Pettersson LGM, Nilsson A. The inhomogeneous structure of water at ambient conditions. Proc Natl Acad Sci U S A 2009; 106:15214-8. [PMID: 19706484 PMCID: PMC2741230 DOI: 10.1073/pnas.0904743106] [Citation(s) in RCA: 384] [Impact Index Per Article: 25.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2009] [Indexed: 11/18/2022] Open
Abstract
Small-angle X-ray scattering (SAXS) is used to demonstrate the presence of density fluctuations in ambient water on a physical length-scale of approximately 1 nm; this is retained with decreasing temperature while the magnitude is enhanced. In contrast, the magnitude of fluctuations in a normal liquid, such as CCl(4), exhibits no enhancement with decreasing temperature, as is also the case for water from molecular dynamics simulations under ambient conditions. Based on X-ray emission spectroscopy and X-ray Raman scattering data we propose that the density difference contrast in SAXS is due to fluctuations between tetrahedral-like and hydrogen-bond distorted structures related to, respectively, low and high density water. We combine our experimental observations to propose a model of water as a temperature-dependent, fluctuating equilibrium between the two types of local structures driven by incommensurate requirements for minimizing enthalpy (strong near-tetrahedral hydrogen-bonds) and maximizing entropy (nondirectional H-bonds and disorder). The present results provide experimental evidence that the extreme differences anticipated in the hydrogen-bonding environment in the deeply supercooled regime surprisingly remain in bulk water even at conditions ranging from ambient up to close to the boiling point.
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Affiliation(s)
- C. Huang
- Stanford Synchrotron Radiation Lightsource, P.O.B. 20450, Stanford, CA 94309
| | | | - T. Tokushima
- RIKEN/SPring-8, Sayo-cho, Sayo, Hyogo 679-5148, Japan
| | - D. Nordlund
- Stanford Synchrotron Radiation Lightsource, P.O.B. 20450, Stanford, CA 94309
| | - Y. Harada
- RIKEN/SPring-8, Sayo-cho, Sayo, Hyogo 679-5148, Japan
- Department of Applied Chemistry, University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
| | - U. Bergmann
- Stanford Synchrotron Radiation Lightsource, P.O.B. 20450, Stanford, CA 94309
| | - M. Niebuhr
- Stanford Synchrotron Radiation Lightsource, P.O.B. 20450, Stanford, CA 94309
| | - T. M. Weiss
- Stanford Synchrotron Radiation Lightsource, P.O.B. 20450, Stanford, CA 94309
| | - Y. Horikawa
- RIKEN/SPring-8, Sayo-cho, Sayo, Hyogo 679-5148, Japan
- Department of Physical Science, Hiroshima University, Higashi-Hiroshima 739-8526, Japan
| | | | | | - O. Takahashi
- Department of Chemistry, Hiroshima University, Higashi-Hiroshima 739-8526, Japan
| | - A. Lenz
- Department of Chemistry, Linköping University, S-581 83 Linköping, Sweden; and
| | - L. Ojamäe
- Department of Chemistry, Linköping University, S-581 83 Linköping, Sweden; and
| | - A. P. Lyubartsev
- Division of Physical Chemistry, Stockholm University, S-10691 Stockholm, Sweden
| | - S. Shin
- RIKEN/SPring-8, Sayo-cho, Sayo, Hyogo 679-5148, Japan
- Institute for Solid State Physics, University of Tokyo, Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | | | - A. Nilsson
- Stanford Synchrotron Radiation Lightsource, P.O.B. 20450, Stanford, CA 94309
- FYSIKUM, AlbaNova, and
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Jacobs JL, Takahashi O, Ohde S, Tokuda Y, Omata F, Fukui T. PDA usage by Japanese resident physicians is low: a cross-sectional survey. Methods Inf Med 2009; 48:475-9. [PMID: 19499140 DOI: 10.3414/me0607] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2008] [Accepted: 04/14/2009] [Indexed: 11/09/2022]
Abstract
OBJECTIVES Personal digital assistants (PDAs) are in widespread use by resident physicians in many countries, reaching as high as 95% in some reports. Uses are varied and include clinical decision support and support of evidence-based practice. Utilization by resident doctors in Japan has not been characterized. This study was conducted to determine practice patterns of PDA use by Japanese resident physicians. METHODS A nationwide cohort survey study was distributed to all 1070 residency teaching programs in Japan. The survey included questions pertaining to use of PDAs in clinical practice. RESULTS 1124 surveys were returned (response rate of approximately 75%). 297 (30.7%) respondents reported currently using PDAs, while 971 (86.4%) reported having used a PDA in the past. PDA users were more likely to be male (p <0.05), but no other significant differences were found when examining the following variables: age, training site (university hospital versus community teaching hospital), satisfaction with existing information technology access. CONCLUSIONS Use of PDAs among Japanese resident physicians is much lower than their counterparts in other countries. In light of this, further research on patient outcomes in Japan and the impact of PDA usage on patient outcomes is urgently needed. If demonstrated to improve outcomes, barriers to adoption need to be identified and overcome.
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Affiliation(s)
- Joshua L Jacobs
- Center for Clinical Epidemiology, St. Luke's Life Science Institute, Chuo-city, Tokyo, 104-0044, Japan.
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Kusakabe K, Fukuda K, Mizoguchi H, Taneda M, Takahashi O. Steam reforming of propane in a zirconia membrane reactor with a Rh-supported Ce0.15Zr0.85O2catalyst. ASIA-PAC J CHEM ENG 2009. [DOI: 10.1002/apj.239] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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47
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Ishikura Y, Tsuzuki S, Takahashi O, Tokuda C, Nakanishi R, Shinoda T, Taguchi H. Recognition site for the side chain of 2-ketoacid substrate in d-lactate dehydrogenase. J Biochem 2009; 138:741-9. [PMID: 16428303 DOI: 10.1093/jb/mvi170] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Replacement of Tyr52 with Val or Ala in Lactobacillus pentosus d-lactate dehydrogenase induced high activity and preference for large aliphatic 2-ketoacids and phenylpyruvate. On the other hand, replacements with Arg, Thr or Asp severely reduced the enzyme activity, and the Tyr52Arg enzyme, the only one that exhibited significant enzyme activity, showed a similar substrate preference to the Tyr52Val and Tyr52Ala enzymes. Replacement of Phe299 with Gly or Ser greatly reduced the enzyme activity with less marked change in the substrate preference. Except for the Phe299Ser enzyme, these mutant enzymes with low catalytic activity consistently stimulated NADH oxidation in the absence of 2-ketoacid substrates. However, the double mutant enzymes, Tyr52Arg/Phe299Gly and Tyr52Thr/Phe299Ser, did not exhibit synergically decreased enzyme activity or the substrate-independent NADH oxidation, but rather increased activities toward certain 2-ketoacid substrates. These results indicate that the coordinative combination of amino acid residues at two positions is pivotal in both the functional recognition of the 2-ketoacid side chain and the protection of the bound NADH molecule from the solvent. Multiplicity in such combinations appears to provide d-LDH-related 2-hydroxyacid dehydrogenases with a great variety of catalytic and physiological functions.
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Affiliation(s)
- Yoshirou Ishikura
- Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510
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Kawasaki T, Nakamura S, Sakamoto G, Murata S, Tsunoda-shimizu H, Suzuki K, Takahashi O, Nakazawa T, Kondo T, Katoh R. Neuroendocrine ductal carcinomain situ(NE-DCIS) of the breast - comparative clinicopathological study of 20 NE-DCIS cases and 274 non-NE-DCIS cases. Histopathology 2008; 53:288-98. [DOI: 10.1111/j.1365-2559.2008.03093.x] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Oda A, Takahashi O, Yamaotsu N, Hirono S. Effects of initial conformations of small ligands on computational docking accuracies. Acta Crystallogr A 2008. [DOI: 10.1107/s0108767308092878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Pettersson LGM, Tokushima T, Harada Y, Takahashi O, Shin S, Nilsson A. Comment on "Isotope and temperature effects in liquid water probed by X-ray absorption and resonant -ray emission spectroscopy". Phys Rev Lett 2008; 100:249801; author reply 249802. [PMID: 18643637 DOI: 10.1103/physrevlett.100.249801] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2008] [Indexed: 05/23/2023]
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